View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0948_low_5 (Length: 560)

Name: NF0948_low_5
Description: NF0948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0948_low_5
NF0948_low_5
[»] chr1 (24 HSPs)
chr1 (22-522)||(2073580-2074083)
chr1 (22-522)||(2069234-2069737)
chr1 (37-96)||(17745265-17745325)
chr1 (38-104)||(40257398-40257465)
chr1 (38-104)||(51814493-51814560)
chr1 (47-104)||(8177201-8177259)
chr1 (38-103)||(19528337-19528403)
chr1 (40-104)||(25297771-25297836)
chr1 (38-102)||(44126396-44126461)
chr1 (38-104)||(8904413-8904480)
chr1 (38-104)||(41508830-41508897)
chr1 (38-103)||(9117119-9117185)
chr1 (38-103)||(9165205-9165271)
chr1 (65-103)||(11068881-11068919)
chr1 (50-103)||(19480527-19480581)
chr1 (38-103)||(47753714-47753780)
chr1 (38-103)||(52116791-52116857)
chr1 (38-86)||(12587287-12587336)
chr1 (62-103)||(16170013-16170054)
chr1 (22-90)||(28411343-28411412)
chr1 (70-103)||(38978985-38979018)
chr1 (62-103)||(42983409-42983450)
chr1 (47-103)||(51703779-51703836)
chr1 (38-101)||(33700783-33700847)
[»] chr5 (13 HSPs)
chr5 (38-103)||(14495815-14495881)
chr5 (38-105)||(29692396-29692464)
chr5 (38-96)||(1410669-1410728)
chr5 (38-103)||(16773807-16773873)
chr5 (37-96)||(16436625-16436684)
chr5 (37-103)||(16457810-16457877)
chr5 (45-96)||(19949633-19949684)
chr5 (45-103)||(29075781-29075840)
chr5 (38-103)||(21589288-21589354)
chr5 (38-103)||(5390862-5390926)
chr5 (67-103)||(892514-892550)
chr5 (40-103)||(6844729-6844793)
chr5 (48-103)||(21549157-21549213)
[»] chr6 (14 HSPs)
chr6 (45-103)||(24641207-24641266)
chr6 (38-96)||(6776617-6776676)
chr6 (38-104)||(33549103-33549170)
chr6 (47-105)||(12188322-12188381)
chr6 (38-104)||(12234517-12234584)
chr6 (38-104)||(31623001-31623068)
chr6 (62-101)||(32613175-32613214)
chr6 (37-83)||(346551-346597)
chr6 (38-103)||(21418470-21418536)
chr6 (38-103)||(30127400-30127466)
chr6 (67-96)||(34444810-34444839)
chr6 (67-103)||(28028530-28028566)
chr6 (48-103)||(32201905-32201961)
chr6 (64-96)||(33931982-33932014)
[»] chr3 (21 HSPs)
chr3 (38-99)||(4844521-4844583)
chr3 (38-99)||(4870217-4870279)
chr3 (38-99)||(2667866-2667928)
chr3 (48-104)||(5499427-5499484)
chr3 (38-103)||(14186648-14186713)
chr3 (62-103)||(16991542-16991583)
chr3 (40-104)||(31520617-31520682)
chr3 (38-104)||(8051213-8051280)
chr3 (62-104)||(10499144-10499186)
chr3 (45-104)||(36720380-36720440)
chr3 (38-96)||(13808895-13808954)
chr3 (45-103)||(31788987-31789046)
chr3 (65-103)||(203090-203128)
chr3 (47-104)||(7975417-7975475)
chr3 (38-103)||(14339610-14339676)
chr3 (38-103)||(21960551-21960617)
chr3 (50-103)||(42430335-42430388)
chr3 (47-104)||(46518627-46518685)
chr3 (47-103)||(4222141-4222198)
chr3 (48-95)||(11612307-11612355)
chr3 (67-99)||(17554454-17554486)
[»] chr7 (19 HSPs)
chr7 (62-105)||(35119381-35119424)
chr7 (38-104)||(45709718-45709785)
chr7 (38-103)||(15137553-15137619)
chr7 (38-103)||(22760863-22760929)
chr7 (38-103)||(23301612-23301678)
chr7 (38-103)||(48771938-48772004)
chr7 (36-103)||(25021343-25021411)
chr7 (64-103)||(4161288-4161327)
chr7 (38-104)||(23552117-23552184)
chr7 (38-96)||(41519274-41519333)
chr7 (50-103)||(7801180-7801234)
chr7 (47-96)||(23595736-23595786)
chr7 (50-103)||(25956314-25956368)
chr7 (38-103)||(26459420-26459486)
chr7 (47-104)||(26526289-26526347)
chr7 (38-103)||(43590907-43590973)
chr7 (39-103)||(25590611-25590676)
chr7 (67-104)||(41487361-41487398)
chr7 (38-101)||(21854550-21854614)
[»] chr2 (13 HSPs)
chr2 (38-104)||(39714991-39715058)
chr2 (38-105)||(37480073-37480141)
chr2 (38-104)||(34041598-34041665)
chr2 (37-106)||(29197385-29197455)
chr2 (38-103)||(42327405-42327471)
chr2 (48-96)||(3001386-3001435)
chr2 (47-103)||(4438998-4439055)
chr2 (75-104)||(25931005-25931034)
chr2 (45-104)||(7799052-7799112)
chr2 (47-102)||(16918597-16918653)
chr2 (48-103)||(18259730-18259786)
chr2 (67-103)||(32106566-32106602)
chr2 (40-103)||(41202250-41202314)
[»] chr4 (13 HSPs)
chr4 (38-103)||(47044717-47044783)
chr4 (40-103)||(9241037-9241101)
chr4 (62-104)||(51250557-51250599)
chr4 (38-103)||(51948480-51948546)
chr4 (38-103)||(19229218-19229283)
chr4 (39-103)||(19238588-19238653)
chr4 (48-103)||(28635696-28635752)
chr4 (38-96)||(21660154-21660213)
chr4 (38-96)||(21668918-21668977)
chr4 (62-105)||(27965545-27965588)
chr4 (38-103)||(37109361-37109427)
chr4 (38-103)||(55427210-55427276)
chr4 (67-103)||(13496241-13496277)
[»] chr8 (14 HSPs)
chr8 (47-103)||(32157191-32157248)
chr8 (38-104)||(16852339-16852406)
chr8 (38-103)||(968362-968428)
chr8 (38-103)||(23361659-23361725)
chr8 (38-104)||(4830486-4830553)
chr8 (38-104)||(5801046-5801113)
chr8 (38-104)||(19703497-19703564)
chr8 (49-103)||(20994479-20994534)
chr8 (38-103)||(26688865-26688931)
chr8 (38-102)||(29858059-29858124)
chr8 (38-101)||(2203494-2203558)
chr8 (37-104)||(8484998-8485066)
chr8 (67-107)||(22268973-22269013)
chr8 (37-104)||(28783059-28783127)
[»] scaffold0299 (1 HSPs)
scaffold0299 (38-96)||(11535-11594)
[»] scaffold0258 (1 HSPs)
scaffold0258 (38-103)||(15333-15399)
[»] scaffold0187 (2 HSPs)
scaffold0187 (70-103)||(12465-12498)
scaffold0187 (70-103)||(22793-22826)
[»] scaffold1367 (1 HSPs)
scaffold1367 (38-96)||(850-909)
[»] scaffold0118 (1 HSPs)
scaffold0118 (38-103)||(41643-41709)
[»] scaffold0070 (1 HSPs)
scaffold0070 (62-103)||(42555-42596)
[»] scaffold0417 (1 HSPs)
scaffold0417 (62-106)||(10216-10260)


Alignment Details
Target: chr1 (Bit Score: 419; Significance: 0; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 22 - 522
Target Start/End: Complemental strand, 2074083 - 2073580
Alignment:
Q  22 cagagagatttgagtatgagacgtcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaaatgggtttggtggttgaaagtgtta 121  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2074083 cagagggatttgaatatgagacttcgaggaggagcacacgctagatcccaagtcaatacaaccaggccaacccaaatgggtttggtggttgaaagtgtta 2073984  T
Q  122 aagacacatttgcagttacagataaggttgacacttctttctatatggttttgcacaatgtgacagataa-----ttcgtaatgatgtcgtcgaatcaaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     |||||||| ||||||||||||||||    
T  2073983 aagacacatttgcagttacagataaggttgacacttctttctgtatggttttgcacaatgtgacagataaaagaattcgtaattatgtcgtcgaatcaaa 2073884  T
Q  217 ccatcaagttgatgctccatttattttggatcccgcacatgaatctccttccaatgataattgtgtggagaaaatgtcgtgaatgcacaagcgaatattc 316  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  2073883 ccatcaagttgatgctccatttattttggatcccgtacatgaatctccttccaatgataattgtgtggagaa--tgttgtgaatgcacaagcgaatattc 2073786  T
Q  317 aagtttcagactttgaggagactccttctgatactcacatattggttggtaatacatcagttcctccgcattgtgtggcgcctatacaaagagacattga 416  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  2073785 aagtttcagactttgaggagactccttctgatactcacattttggttggtaatacatcaattcctccgcattgtgtggcgcctatacaaagagacattca 2073686  T
Q  417 tgttattagcgcagacaaggtctcaggcgccctctttgttctactattcttcaaagagataatgatttaattgagcaagatttggctttggaccgttaac 516  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2073685 tgttattagcgcggacaaggtctcaggcgccctccttgttctactattcttcaaagagataatgatttaattgagcaagatttggctttggaccgttaac 2073586  T
Q  517 atcatt 522  Q
    ||||||    
T  2073585 atcatt 2073580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 22 - 522
Target Start/End: Complemental strand, 2069737 - 2069234
Alignment:
Q  22 cagagagatttgagtatgagacgtcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaaatgggtttggtggttgaaagtgtta 121  Q
    ||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  2069737 cagagggatttgaatatgagacttcgaggaggagcacatgccagatcccaagtcaatacaaccaggccaacccaaatgggtgtggtggttgaaagtgtta 2069638  T
Q  122 aagacacatttgcagttacagataaggttgacacttctttctatatggttttgcacaatgtgacagataa-----ttcgtaatgatgtcgtcgaatcaaa 216  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||     |||||||| ||||||||||||||||    
T  2069637 aagacacatttgcaattacagataaggttgacacttctttctgtatggttttgcacaatgtgacagataaaagaattcgtaattatgtcgtcgaatcaaa 2069538  T
Q  217 ccatcaagttgatgctccatttattttggatcccgcacatgaatctccttccaatgataattgtgtggagaaaatgtcgtgaatgcacaagcgaatattc 316  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  2069537 ccatcaagttgatgctccatttattttggatcccgtacatgaatctccttccaatgataattgtgtggagaa--tgtcatgaatgcacaagcgaatattc 2069440  T
Q  317 aagtttcagactttgaggagactccttctgatactcacatattggttggtaatacatcagttcctccgcattgtgtggcgcctatacaaagagacattga 416  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  2069439 aagtttcagactttgaggagactccttctgatactcacattttggttggtaatacatcaattcctctgcattgtgtggcgcctatacaaagagacattga 2069340  T
Q  417 tgttattagcgcagacaaggtctcaggcgccctctttgttctactattcttcaaagagataatgatttaattgagcaagatttggctttggaccgttaac 516  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2069339 tgttattagcgcagacaaggtctcaggcgccctccttgttctactattcttcaaagagataatgatttaattgagcaagatttggctttggaccgttaac 2069240  T
Q  517 atcatt 522  Q
    ||||||    
T  2069239 atcatt 2069234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 17745265 - 17745325
Alignment:
Q  37 atgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaa 96  Q
    ||||||| |||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||    
T  17745265 atgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaa 17745325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 40257465 - 40257398
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||||||||||| || || || |||| |||||||||||||||||||||| |||||||    
T  40257465 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 51814560 - 51814493
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| | |||||||||||||| | |||||| ||||||||||||| ||||||||||||| |||||||    
T  51814560 tgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 8177201 - 8177259
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||||| || |||||||||| ||||||||| |||||||| |||||||||||    
T  8177201 gaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 19528337 - 19528403
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| |  |||||||||| |||||||||||||||||||||| ||||||    
T  19528337 tgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 25297836 - 25297771
Alignment:
Q  40 agacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||| |||||||||||||||| | ||||||| ||||||||||||| || ||||||||| |||||||    
T  25297836 agacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 44126461 - 44126396
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggt 102  Q
    |||||| ||| |||||||||||| || || ||||| |||||||||||||||||||||||| |||||    
T  44126461 tgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 8904480 - 8904413
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| | |||||||||||||| | || ||||||||||||||| || |||||||||||| |||||||    
T  8904480 tgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 41508897 - 41508830
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| | |||||||||||||| || |||||||||  || ||||||||||||||||||| |||||||    
T  41508897 tgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 9117185 - 9117119
Alignment:
Q  38 tgagacgtcgaggaggagcacacg-ccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| || |||||||||||||  |||||||||||| | |||||| | ||||||||||||||||||    
T  9117185 tgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 9165205 - 9165271
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||    
T  9165205 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 11068881 - 11068919
Alignment:
Q  65 gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  11068881 gatcccaagtcaataccaccagatcaacccaaatgggtt 11068919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 19480581 - 19480527
Alignment:
Q  50 gaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| ||| ||||||||||||| ||||  |||||||||||||||||||    
T  19480581 gaggagcacactccaagatcccaagtcaacaccataaggccaacccaaatgggtt 19480527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 47753780 - 47753714
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||  || ||||||||||||||||| |||||| ||||| |||||||||    
T  47753780 tgagaccttgaggaggagcacagtcctagatcccaagtcaatacgaccaggtcaacctaaatgggtt 47753714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 52116791 - 52116857
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| ||  | ||||||| |||||||||||||||||||||| ||||||    
T  52116791 tgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 12587336 - 12587287
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccag 86  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||    
T  12587336 tgagacctcgaggaggagcacactcacagatcccaagtcaatatcaccag 12587287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 16170013 - 16170054
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||| |||||||||||||||||||||| ||||||| ||||||    
T  16170013 ccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 28411412 - 28411343
Alignment:
Q  22 cagagagatttgagtatgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggcca 90  Q
    |||||||| |||| | |||||| || | ||||||||||| | || |||||||||||||||||||||||||    
T  28411412 cagagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccaggcca 28411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 38978985 - 38979018
Alignment:
Q  70 caagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||| |||||||||||||||||||    
T  38978985 caagtcaataccactaggccaacccaaatgggtt 38979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 42983409 - 42983450
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||| |||||||||||||||| |||||||||||| ||||    
T  42983409 ccagatctcaagtcaataccaccatgccaacccaaataggtt 42983450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 51703836 - 51703779
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||| || |||| ||||| ||||||||| || ||||||||||||||||    
T  51703836 gaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 33700783 - 33700847
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatggg 101  Q
    |||||| | |||||||||||||| || |||| ||||| ||||||||| |||||||||||| ||||    
T  33700783 tgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 14495815 - 14495881
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  14495815 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 29692396 - 29692464
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtttg 105  Q
    |||||| | |||||||||||||| || |||||||||  |||||||||||| ||||||||||||||||||    
T  29692396 tgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggtttg 29692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 1410669 - 1410728
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||||| |||||||||    
T  1410669 tgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 16773873 - 16773807
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||||| || || |||||||||||||||||||| ||||| ||| ||||||    
T  16773873 tgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 16436684 - 16436625
Alignment:
Q  37 atgagacgtcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaa 96  Q
    ||||||| | |||||||||||||| |||  ||||||| ||||||||| ||||||||||||    
T  16436684 atgagaccttgaggaggagcacactccaagtcccaagccaataccactaggccaacccaa 16436625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 16457877 - 16457810
Alignment:
Q  37 atgagacgtcgaggaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||| | |||||||||||||| ||| | ||||||| ||||||||||||||||||| || ||||||    
T  16457877 atgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 19949633 - 19949684
Alignment:
Q  45 tcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||||||||||||| | ||||| |||||||||||||||| | ||||||||    
T  19949633 tcgaggaggagcacactctagatctcaagtcaataccaccaagtcaacccaa 19949684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 29075840 - 29075781
Alignment:
Q  45 tcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||||| || |||||||||| ||||||||| |||| ||||||| ||||||    
T  29075840 tcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 21589354 - 21589288
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||| |||| || || || ||||||| |||||||||||||||||||||| ||||||    
T  21589354 tgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 5390862 - 5390926
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||| | | ||  |||||| ||||||||| |||||||||||||||||||    
T  5390862 tgagacctcgaggaggagcactcccaagc-cccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 892514 - 892550
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  892514 tcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 6844793 - 6844729
Alignment:
Q  40 agacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||| |||||||||| ||||| || | || |||||||||||||||| ||||||||||| ||||||    
T  6844793 agacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  48 aggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 24641207 - 24641266
Alignment:
Q  45 tcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  24641207 tcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 6776617 - 6776676
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  6776617 tgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaa 6776676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 33549170 - 33549103
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||||||||||| || || ||||||| |||||||||||| ||||||||| |||||||    
T  33549170 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 12188322 - 12188381
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtttg 105  Q
    |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||||    
T  12188322 gaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtttg 12188381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 12234517 - 12234584
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||  ||||||||| || || ||||||||||||||||||||||||||| || |||||||    
T  12234517 tgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 31623001 - 31623068
Alignment:
Q  38 tgagacgtcgaggaggagcacac-gccagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| ||||||||||||||||  |||| ||||||| |||||||||| | ||||||||| |||||||    
T  31623001 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 32613175 - 32613214
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatggg 101  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  32613175 ccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 346597 - 346551
Alignment:
Q  37 atgagacgtcgaggaggagcacacgccagatcccaagtcaataccac 83  Q
    ||||||| |||||||| ||||||| |||| |||||||||||||||||    
T  346597 atgagacctcgaggagaagcacactccaggtcccaagtcaataccac 346551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 21418536 - 21418470
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| ||  | ||||||| |||||||||||||||||||||| ||||||    
T  21418536 tgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 30127466 - 30127400
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||| ||||||||||| || ||| |||||| |||||||||||| ||||||||| ||||||    
T  30127466 tgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 34444839 - 34444810
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaa 96  Q
    ||||||||||||||||||||||||||||||    
T  34444839 tcccaagtcaataccaccaggccaacccaa 34444810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 28028566 - 28028530
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  28028566 tcccaagtcaacaccaccaggccaacccaagtgggtt 28028530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 32201905 - 32201961
Alignment:
Q  48 aggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||| |  |||||||||| ||||||||||| | |||||||||||||||    
T  32201905 aggaggagcacactctgagatcccaagccaataccaccaagtcaacccaaatgggtt 32201961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 33931982 - 33932014
Alignment:
Q  64 agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||||||||||||||||||||| ||||||||    
T  33931982 agatcccaagtcaataccaccaggtcaacccaa 33932014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 4844521 - 4844583
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatg 99  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  4844521 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatg 4844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 4870217 - 4870279
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatg 99  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  4870217 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatg 4870279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 2667928 - 2667866
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatg 99  Q
    |||||| ||||||| |||||||| || |||||||||| |||||||||||||||||||||||||    
T  2667928 tgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaaatg 2667866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 5499427 - 5499484
Alignment:
Q  48 aggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||| |||||||    
T  5499427 aggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 14186713 - 14186648
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||    
T  14186713 tgagaccttgaggaggagcacactccaggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 16991583 - 16991542
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16991583 ccagatcccaagccaataccaccaggccaacccaaatgggtt 16991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 31520617 - 31520682
Alignment:
Q  40 agacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||| |||||||||||||||| || |||||||||| |||| ||||||||||||||||| |||||||    
T  31520617 agacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 8051280 - 8051213
Alignment:
Q  38 tgagacgtcgaggaggagcacac-gccagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||| |||| || ||||| ||||||| |||||||||||||||||||||| |||||||    
T  8051280 tgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggttt 8051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 10499144 - 10499186
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  10499144 ccagatcccaagccaataccaccaggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 36720440 - 36720380
Alignment:
Q  45 tcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||||||| || | |||||||| |||||||||||| ||||||||| |||||||    
T  36720440 tcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 13808895 - 13808954
Alignment:
Q  38 tgagacgtcgaggaggagcacac-gccagatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| | |||||||||||||| |||||||||||||||||||  ||||| |||||||||    
T  13808895 tgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaa 13808954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 31788987 - 31789046
Alignment:
Q  45 tcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||||| || |||||||||| ||||| ||| |||||||||||| ||||||    
T  31788987 tcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 203128 - 203090
Alignment:
Q  65 gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  203128 gatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 7975475 - 7975417
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||||| || |||||||||| | ||||||| ||||||||| ||||||||||    
T  7975475 gaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 14339676 - 14339610
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || | |||||||| ||||||||||||||||| |||| ||||||    
T  14339676 tgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 21960617 - 21960551
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||||| | ||| ||||||| ||||||||||||  |||||||| ||||||    
T  21960617 tgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 42430388 - 42430335
Alignment:
Q  50 gaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccacca-gccaacccaagtgggtt 42430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 46518685 - 46518627
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||||| || |||||||||| ||||||||| | |||||||||| |||||||    
T  46518685 gaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 4222198 - 4222141
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||| || |||||||||| ||||||||| | |||||||||| ||||||    
T  4222198 gaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11612355 - 11612307
Alignment:
Q  48 aggaggagcacacgcc-agatcccaagtcaataccaccaggccaaccca 95  Q
    ||||||||||||| || || |||||||| ||||||||||||||||||||    
T  11612355 aggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 17554486 - 17554454
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatg 99  Q
    ||||||||||||| |||||||||||||||||||    
T  17554486 tcccaagtcaatatcaccaggccaacccaaatg 17554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 35119424 - 35119381
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtttg 105  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  35119424 ccagatcccaagtcaataccactaggccaacccaaatgggtttg 35119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 45709718 - 45709785
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||||||||||| | |||||||||||  |||||||| ||||||||||||||||||||    
T  45709718 tgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 15137619 - 15137553
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || | ||||||||||| ||||||||||||||||||| ||||||    
T  15137619 tgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 22760929 - 22760863
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || || |||||||||||||||||||| ||||||||| ||||||    
T  22760929 tgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 23301612 - 23301678
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| || ||||||||||||| ||  | |||||||||||||||||||||||||||||| ||||||    
T  23301612 tgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 48772004 - 48771938
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| || ||||||||||||| || |||||||||| ||||||||||| |||||||||| ||||||    
T  48772004 tgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 25021343 - 25021411
Alignment:
Q  36 tatgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||| | |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||    
T  25021343 tatgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 4161327 - 4161288
Alignment:
Q  64 agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  4161327 agatcccaagccaataccaccagaccaacccaaatgggtt 4161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 23552184 - 23552117
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| | |||||||||||||| || || ||||||||||||| ||| |||||||||||| |||||||    
T  23552184 tgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 41519274 - 41519333
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| | |||||||||||||| || | |||||||||||||||||| ||||||||||||    
T  41519274 tgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaa 41519333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 7801234 - 7801180
Alignment:
Q  50 gaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| || || ||||||||||||||||||||||||| |||| ||||||    
T  7801234 gaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 23595786 - 23595736
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||||||||||| || ||||| ||||||||||||||||| |||||||||    
T  23595786 gaggaggagcacactccgagatctcaagtcaataccaccagaccaacccaa 23595736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 25956314 - 25956368
Alignment:
Q  50 gaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| ||| | ||||||| ||||||||| |||||||||||||||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 26459420 - 26459486
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||    
T  26459420 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 26526347 - 26526289
Alignment:
Q  47 gaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||||| | || |||| |||||||||||||||| |||| ||||||||||||    
T  26526347 gaggaggagcacactctcaaatcctaagtcaataccaccagaccaatccaaatgggttt 26526289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 43590973 - 43590907
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| ||  | ||||||| |||||||||||||||||||||| ||||||    
T  43590973 tgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 25590676 - 25590611
Alignment:
Q  39 gagacgtcgaggaggagcacac-gccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||| |||| |||||||| ||||||    
T  25590676 gagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 41487398 - 41487361
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  41487398 tcccaagccaataccaccaggccaacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 21854614 - 21854550
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatggg 101  Q
    |||||| | |||||||||||||| || ||||||| || |||||||| ||||||||||||| ||||    
T  21854614 tgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 39715058 - 39714991
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||||||||||| || || ||||||||||||||||||| |||||||||| |||||||    
T  39715058 tgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 37480141 - 37480073
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggtttg 105  Q
    |||||| | |||||||||||||| | ||| ||||||| |||||||||||||||||||||| ||||||||    
T  37480141 tgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtttg 37480073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 34041598 - 34041665
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| | |||||||||||||| | ||||||| ||||||||||||| |||||||||||| |||||||    
T  34041598 tgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 29197385 - 29197455
Alignment:
Q  37 atgagacgtcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggtttgg 106  Q
    ||||||| || ||||||||||||| ||  | ||||||||||||||||||| |||||||||| |||||||||    
T  29197385 atgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtttgg 29197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 42327405 - 42327471
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||    
T  42327405 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 3001435 - 3001386
Alignment:
Q  48 aggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    ||||||||||||| || ||||| |||||||||||||| ||||||||||||    
T  3001435 aggaggagcacactcctagatctcaagtcaataccactaggccaacccaa 3001386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 4438998 - 4439055
Alignment:
Q  47 gaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||||| | |||||||||||| |||||||  |||||||||||| ||||||    
T  4438998 gaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 25931034 - 25931005
Alignment:
Q  75 caataccaccaggccaacccaaatgggttt 104  Q
    ||||||||||||||||||||||||||||||    
T  25931034 caataccaccaggccaacccaaatgggttt 25931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 7799052 - 7799112
Alignment:
Q  45 tcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||||||| ||  | ||||||| ||||||||||||| |||||||| |||||||    
T  7799052 tcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 16918597 - 16918653
Alignment:
Q  47 gaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggt 102  Q
    |||||||||||||| || |||||||||  ||||||||| |||||||||||| |||||    
T  16918597 gaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 18259786 - 18259730
Alignment:
Q  48 aggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||| | || ||| |||| |||||||||||||||||| ||||||||||    
T  18259786 aggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 32106602 - 32106566
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  32106602 tcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 41202314 - 41202250
Alignment:
Q  40 agacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||| ||||||||||||| || || ||||| || |||||||||||||| ||||||||||| ||||    
T  41202314 agacttcgaggaggagcatactcccagatctcaggtcaataccaccagaccaacccaaataggtt 41202250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 47044783 - 47044717
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||| |||| ||||||    
T  47044783 tgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 9241037 - 9241101
Alignment:
Q  40 agacgtcgaggaggagcacacg-ccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||| ||||| ||||||||||  |||||||||||| |||||||||||||||||||||| ||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 51250557 - 51250599
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  51250557 ccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 51948546 - 51948480
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| ||||||||| |||||| || ||||||||||||||||| |||||| |||||||| ||||||    
T  51948546 tgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 19229218 - 19229283
Alignment:
Q  38 tgagacgtcgaggaggagcacacgccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||||  | |  ||||| | |||||||||||||||||||||||||||||    
T  19229218 tgagacctcgaggaggagcacattctaagtcccaggccaataccaccaggccaacccaaatgggtt 19229283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 19238588 - 19238653
Alignment:
Q  39 gagacgtcgaggaggagcacacgccaga-tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||| |||||||||||||||| ||  | ||||||| |||||||||||||||||||||| ||||||    
T  19238588 gagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 28635752 - 28635696
Alignment:
Q  48 aggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||| || ||||||||||||| |||||||||| |||||||| ||||||    
T  28635752 aggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 21660154 - 21660213
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| ||||||| |||||||| || ||||| ||||||||||||||||| |||||||||    
T  21660154 tgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaa 21660213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 21668918 - 21668977
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| ||||||| |||||||| || ||||| ||||||||||||||||| |||||||||    
T  21668918 tgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaa 21668977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 27965545 - 27965588
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtttg 105  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||    
T  27965545 ccagatcccaagccaataccactaggccaacccaagtgggtttg 27965588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 37109361 - 37109427
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||||    
T  37109361 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 55427210 - 55427276
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| ||||| ||||||| || || || ||||||| |||||||||||||||||||||| ||||||    
T  55427210 tgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 13496277 - 13496241
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  13496277 tcccaagtcaataccaccatgccaacccaagtgggtt 13496241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 32157248 - 32157191
Alignment:
Q  47 gaggaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||    
T  32157248 gaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 16852406 - 16852339
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||||||||||| || || ||||||| ||||||||| |||||||||||| |||||||    
T  16852406 tgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 968428 - 968362
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||||| || || ||||||| |||||||||||||||||| ||| ||||||    
T  968428 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 23361659 - 23361725
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| || | |||||||||||||||||||||| |||||||| ||||||    
T  23361659 tgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 4830553 - 4830486
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| |||||||||| ||||| | ||||||||||   ||||||||||||||||||||| |||||||    
T  4830553 tgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 5801113 - 5801046
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    ||||||||||||  ||||||||| || ||||||||||  |||||||||||| |||||||| |||||||    
T  5801113 tgagacgtcgagacggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 19703497 - 19703564
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    |||||| | |||||||||||||| | ||| ||||||| ||||||||| |||||||||||| |||||||    
T  19703497 tgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  49 ggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||||||||| || || ||||||||||||||||| |||||||||||| ||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 26688931 - 26688865
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| | |||||||||||||| ||| | ||||||| ||| |||||||||||||||||| ||||||    
T  26688931 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 29858059 - 29858124
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcca-gatcccaagtcaataccaccaggccaacccaaatgggt 102  Q
    |||||| |||||||||||||||| ||  | ||||||| ||||||||||||||||| |||| |||||    
T  29858059 tgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 2203558 - 2203494
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatggg 101  Q
    |||||| | |||||||||||||| || || ||||||| ||||||||| |||||||||||| ||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 8485066 - 8484998
Alignment:
Q  37 atgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    ||||||| || | ||||||||||| | ||| |||||||  ||||||||||||||||||||| |||||||    
T  8485066 atgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 22268973 - 22269013
Alignment:
Q  67 tcccaagtcaataccaccaggccaacccaaatgggtttggt 107  Q
    ||||||| ||| |||||||||||||||||| ||||||||||    
T  22268973 tcccaagccaacaccaccaggccaacccaagtgggtttggt 22269013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 28783127 - 28783059
Alignment:
Q  37 atgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggttt 104  Q
    ||||||| | |||||||||||||| || || || |||| ||||||||||| |||||||||| |||||||    
T  28783127 atgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 11594 - 11535
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| |||||||||||||||| || |||||||||| |||||||||||||||| |||||    
T  11594 tgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaa 11535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 15333 - 15399
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| |||||||||||||||| || || ||||||| |||||||||||| ||||||||| ||||||    
T  15333 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 12465 - 12498
Alignment:
Q  70 caagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||||||||||||||||||||||||    
T  12465 caagtcaataccaccaggccaacccaaatgggtt 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 22793 - 22826
Alignment:
Q  70 caagtcaataccaccaggccaacccaaatgggtt 103  Q
    ||||||||||||||||||||||||||||||||||    
T  22793 caagtcaataccaccaggccaacccaaatgggtt 22826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 850 - 909
Alignment:
Q  38 tgagacgtcgaggaggagcacacgcc-agatcccaagtcaataccaccaggccaacccaa 96  Q
    |||||| |||||||||||||||  || |||||||||| |||||||||||||||| |||||    
T  850 tgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaa 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 41643 - 41709
Alignment:
Q  38 tgagacgtcgaggaggagcacacgc-cagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| ||||||||||||| || | |||||| |||| ||||||||| |||||||||||| ||||||    
T  41643 tgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 42555 - 42596
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtt 103  Q
    |||||| ||||||||||||||| |||||||||||| ||||||    
T  42555 ccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 10260 - 10216
Alignment:
Q  62 ccagatcccaagtcaataccaccaggccaacccaaatgggtttgg 106  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||    
T  10260 ccagatcccaagccaatatcatcaggccaacccaagtgggtttgg 10216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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