View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0949_low_28 (Length: 251)
Name: NF0949_low_28
Description: NF0949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0949_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32614515 - 32614754
Alignment:
| Q |
1 |
attcaatattagaacgaccgtaacatcaacttaaaccaatgaggaataagagataaaggatcttaaaaatcatattagaattaatggttggttaattacc |
100 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32614515 |
attcaatattagagcgaccgtaacatcaacttaaaccaatgagcaataagagataaaggatcttaaaaatcatattagaattaatggttggttaattacc |
32614614 |
T |
|
| Q |
101 |
ttcttggttgccataagttcttgctcaagagcatcagcgcgacttatagcagcattaagcatttcttccttctcaggtggcatgcaagtggttgtgttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32614615 |
ttcttggttgccataagttcttgctcaagagcatcagcgcgacttatagcagcattaagcatttcttccttctcaggtggcatgcaagtggttgtgttca |
32614714 |
T |
|
| Q |
201 |
tgttgcccattttatcttccaactcagccatgcgcttcat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
32614715 |
tgttgcccattttatcttccaactcagccatgcgcttcat |
32614754 |
T |
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