View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0950_low_27 (Length: 319)

Name: NF0950_low_27
Description: NF0950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0950_low_27
NF0950_low_27
[»] chr7 (46 HSPs)
chr7 (30-306)||(24789480-24789756)
chr7 (86-306)||(1532957-1533177)
chr7 (83-303)||(2058329-2058548)
chr7 (83-305)||(21646365-21646588)
chr7 (140-301)||(20343558-20343719)
chr7 (122-306)||(18409159-18409345)
chr7 (30-305)||(25767214-25767491)
chr7 (37-303)||(6594816-6595081)
chr7 (141-303)||(21640205-21640367)
chr7 (123-306)||(39730987-39731172)
chr7 (165-306)||(43504526-43504667)
chr7 (37-279)||(18392454-18392701)
chr7 (37-303)||(6592598-6592865)
chr7 (149-303)||(20357084-20357238)
chr7 (37-251)||(1562262-1562479)
chr7 (126-306)||(18414039-18414221)
chr7 (37-261)||(18389018-18389246)
chr7 (98-303)||(12406595-12406801)
chr7 (167-306)||(48408452-48408591)
chr7 (74-303)||(4873435-4873665)
chr7 (141-303)||(32060670-32060832)
chr7 (174-271)||(24023907-24024004)
chr7 (84-239)||(12397229-12397385)
chr7 (174-263)||(21811835-21811924)
chr7 (174-251)||(24260929-24261006)
chr7 (74-263)||(31109167-31109357)
chr7 (83-303)||(2479683-2479903)
chr7 (30-156)||(39731158-39731284)
chr7 (174-251)||(24265785-24265862)
chr7 (174-251)||(16880475-16880552)
chr7 (174-251)||(16885330-16885407)
chr7 (195-303)||(47264102-47264210)
chr7 (30-136)||(43504408-43504514)
chr7 (30-67)||(48408673-48408710)
chr7 (215-259)||(4538997-4539041)
chr7 (215-263)||(47674389-47674437)
chr7 (215-263)||(47676582-47676630)
chr7 (215-250)||(4178461-4178496)
chr7 (30-117)||(20343723-20343812)
chr7 (122-179)||(3050495-3050555)
chr7 (215-260)||(23554716-23554761)
chr7 (29-66)||(24515019-24515056)
chr7 (215-263)||(4796239-4796287)
chr7 (215-263)||(6360576-6360624)
chr7 (84-128)||(20357240-20357284)
chr7 (215-251)||(24261023-24261059)
[»] chr1 (34 HSPs)
chr1 (30-306)||(20622491-20622767)
chr1 (30-306)||(40282012-40282292)
chr1 (85-297)||(24793709-24793921)
chr1 (73-279)||(24786905-24787111)
chr1 (37-303)||(9036059-9036326)
chr1 (30-306)||(21053593-21053873)
chr1 (30-306)||(9986839-9987117)
chr1 (83-306)||(19365822-19366046)
chr1 (167-306)||(51765044-51765183)
chr1 (37-279)||(44203297-44203542)
chr1 (167-306)||(19360966-19361105)
chr1 (82-230)||(24202360-24202509)
chr1 (74-277)||(41398555-41398759)
chr1 (74-303)||(41390900-41391129)
chr1 (174-279)||(1054593-1054699)
chr1 (237-306)||(24202305-24202374)
chr1 (174-303)||(39445897-39446026)
chr1 (174-279)||(44023456-44023562)
chr1 (174-263)||(25439495-25439584)
chr1 (174-251)||(43988057-43988134)
chr1 (30-136)||(51765197-51765303)
chr1 (122-297)||(13604158-13604334)
chr1 (174-251)||(25444700-25444777)
chr1 (215-263)||(28220673-28220721)
chr1 (215-263)||(28223868-28223916)
chr1 (122-250)||(3282092-3282221)
chr1 (215-263)||(3156541-3156589)
chr1 (219-263)||(31658912-31658956)
chr1 (215-250)||(20762358-20762393)
chr1 (215-249)||(1054718-1054752)
chr1 (29-66)||(13316577-13316614)
chr1 (29-66)||(20762544-20762581)
chr1 (213-252)||(24202435-24202472)
chr1 (215-263)||(49918023-49918071)
[»] chr5 (57 HSPs)
chr5 (30-230)||(29751413-29751615)
chr5 (77-306)||(24136201-24136430)
chr5 (30-306)||(26177520-26177798)
chr5 (84-303)||(27445291-27445510)
chr5 (84-303)||(27450134-27450353)
chr5 (37-303)||(10592900-10593167)
chr5 (30-306)||(9789477-9789755)
chr5 (30-306)||(18441901-18442179)
chr5 (85-276)||(43599043-43599234)
chr5 (85-276)||(43604535-43604726)
chr5 (85-276)||(43610027-43610218)
chr5 (84-276)||(43592597-43592789)
chr5 (30-306)||(26170411-26170689)
chr5 (165-306)||(29720019-29720161)
chr5 (37-279)||(40379757-40380001)
chr5 (37-279)||(40381968-40382212)
chr5 (140-301)||(22536633-22536794)
chr5 (37-279)||(16546295-16546540)
chr5 (84-297)||(31180573-31180787)
chr5 (37-303)||(25077762-25078029)
chr5 (37-303)||(25135731-25135998)
chr5 (37-279)||(16544073-16544318)
chr5 (84-303)||(1456694-1456914)
chr5 (174-303)||(30631763-30631892)
chr5 (181-306)||(29722206-29722332)
chr5 (102-277)||(38219770-38219947)
chr5 (165-306)||(16407695-16407836)
chr5 (83-230)||(35388021-35388169)
chr5 (165-306)||(16409131-16409272)
chr5 (74-303)||(15044994-15045223)
chr5 (237-313)||(29751601-29751677)
chr5 (192-303)||(29402606-29402717)
chr5 (237-306)||(29752267-29752336)
chr5 (84-251)||(2785686-2785854)
chr5 (195-301)||(9352866-9352972)
chr5 (174-263)||(28807172-28807261)
chr5 (174-251)||(33768586-33768663)
chr5 (174-251)||(33791718-33791795)
chr5 (30-136)||(29720173-29720279)
chr5 (237-306)||(15465002-15465071)
chr5 (30-137)||(29722332-29722439)
chr5 (176-252)||(37561054-37561130)
chr5 (237-306)||(36931897-36931966)
chr5 (176-252)||(37556232-37556308)
chr5 (174-251)||(31396598-31396675)
chr5 (174-251)||(31401455-31401532)
chr5 (30-97)||(16409322-16409390)
chr5 (215-263)||(42428864-42428912)
chr5 (30-136)||(16407848-16407954)
chr5 (205-263)||(11916541-11916599)
chr5 (237-283)||(35388155-35388201)
chr5 (29-66)||(13342933-13342970)
chr5 (35-117)||(22536545-22536629)
chr5 (29-66)||(30182461-30182498)
chr5 (29-66)||(36074303-36074340)
chr5 (215-263)||(213018-213066)
chr5 (219-263)||(42426685-42426729)
[»] chr3 (64 HSPs)
chr3 (85-303)||(8477729-8477946)
chr3 (30-303)||(54634766-54635040)
chr3 (30-303)||(6716141-6716415)
chr3 (30-297)||(6718331-6718599)
chr3 (30-297)||(45282628-45282898)
chr3 (83-303)||(40372312-40372532)
chr3 (83-303)||(7167606-7167826)
chr3 (73-297)||(8738585-8738809)
chr3 (73-297)||(9090823-9091047)
chr3 (83-303)||(27352137-27352357)
chr3 (140-303)||(2671121-2671284)
chr3 (37-301)||(25637071-25637337)
chr3 (30-306)||(23198198-23198476)
chr3 (73-303)||(28503375-28503606)
chr3 (124-313)||(1306366-1306557)
chr3 (30-306)||(23200397-23200675)
chr3 (37-303)||(10058083-10058350)
chr3 (37-303)||(10060305-10060572)
chr3 (37-303)||(10062527-10062794)
chr3 (37-303)||(10064749-10065016)
chr3 (73-303)||(28501208-28501439)
chr3 (37-303)||(10055861-10056128)
chr3 (37-303)||(10066971-10067238)
chr3 (37-303)||(3617090-3617358)
chr3 (36-303)||(4598781-4599051)
chr3 (36-303)||(4601002-4601272)
chr3 (122-297)||(32143707-32143884)
chr3 (36-303)||(10211034-10211305)
chr3 (174-303)||(18656843-18656973)
chr3 (122-303)||(22172718-22172899)
chr3 (73-306)||(800739-800973)
chr3 (195-306)||(26928134-26928245)
chr3 (195-306)||(33386191-33386302)
chr3 (30-230)||(7782401-7782603)
chr3 (141-303)||(10208834-10208997)
chr3 (195-306)||(27453416-27453527)
chr3 (195-297)||(27986001-27986103)
chr3 (173-251)||(32475885-32475963)
chr3 (173-251)||(32480743-32480821)
chr3 (195-306)||(37726134-37726245)
chr3 (174-251)||(2672527-2672604)
chr3 (237-306)||(7782589-7782658)
chr3 (174-251)||(8512642-8512719)
chr3 (174-251)||(8517522-8517599)
chr3 (70-251)||(24968414-24968596)
chr3 (174-251)||(2676683-2676760)
chr3 (195-301)||(37408095-37408200)
chr3 (122-297)||(27974477-27974653)
chr3 (122-263)||(16264734-16264876)
chr3 (122-260)||(39032117-39032256)
chr3 (215-263)||(29812737-29812785)
chr3 (203-263)||(40735101-40735161)
chr3 (215-250)||(3393293-3393328)
chr3 (215-250)||(5258591-5258626)
chr3 (74-137)||(22172904-22172967)
chr3 (205-263)||(40734170-40734228)
chr3 (29-70)||(9636386-9636427)
chr3 (215-263)||(6096264-6096312)
chr3 (215-263)||(8370048-8370096)
chr3 (203-263)||(27027174-27027234)
chr3 (203-263)||(36029561-36029621)
chr3 (215-263)||(44331893-44331941)
chr3 (215-263)||(46173190-46173238)
chr3 (215-263)||(49200115-49200163)
[»] chr2 (23 HSPs)
chr2 (84-303)||(9295918-9296137)
chr2 (83-303)||(14291849-14292069)
chr2 (30-306)||(4484591-4484869)
chr2 (83-303)||(11098443-11098663)
chr2 (30-313)||(30832968-30833253)
chr2 (30-306)||(32289202-32289480)
chr2 (108-306)||(25410012-25410212)
chr2 (30-306)||(6266328-6266606)
chr2 (83-306)||(3492099-3492323)
chr2 (37-303)||(12647644-12647911)
chr2 (122-306)||(40739217-40739403)
chr2 (74-303)||(39811533-39811763)
chr2 (122-297)||(28258713-28258889)
chr2 (174-251)||(19344824-19344901)
chr2 (174-251)||(19349682-19349759)
chr2 (122-260)||(34389236-34389375)
chr2 (215-263)||(2837290-2837338)
chr2 (203-263)||(33528193-33528253)
chr2 (29-66)||(4503391-4503428)
chr2 (215-260)||(29867556-29867601)
chr2 (29-66)||(36205922-36205959)
chr2 (29-66)||(45099627-45099664)
chr2 (174-230)||(32247188-32247244)
[»] chr6 (46 HSPs)
chr6 (83-313)||(5674276-5674506)
chr6 (37-303)||(16578777-16579045)
chr6 (37-303)||(16616335-16616603)
chr6 (30-306)||(411739-412017)
chr6 (37-313)||(16554500-16554778)
chr6 (37-313)||(16631056-16631334)
chr6 (37-297)||(16652759-16653021)
chr6 (167-308)||(2171911-2172052)
chr6 (30-306)||(3073013-3073289)
chr6 (141-301)||(27647526-27647686)
chr6 (122-306)||(22709405-22709591)
chr6 (37-303)||(34166722-34166989)
chr6 (141-297)||(5266454-5266610)
chr6 (84-303)||(11857292-11857511)
chr6 (37-297)||(34164506-34164767)
chr6 (37-252)||(25420999-25421214)
chr6 (37-303)||(33342364-33342632)
chr6 (123-295)||(25420861-25421034)
chr6 (37-300)||(6026893-6027157)
chr6 (74-303)||(22010245-22010475)
chr6 (192-303)||(30125074-30125185)
chr6 (141-303)||(13150905-13151068)
chr6 (84-303)||(14741982-14742202)
chr6 (84-297)||(14737128-14737342)
chr6 (121-303)||(6136308-6136491)
chr6 (84-251)||(16839054-16839222)
chr6 (75-263)||(28155167-28155356)
chr6 (174-251)||(5343879-5343956)
chr6 (174-251)||(6005821-6005898)
chr6 (237-306)||(6097863-6097932)
chr6 (174-251)||(33330041-33330118)
chr6 (174-251)||(33335538-33335615)
chr6 (174-250)||(6438898-6438974)
chr6 (30-136)||(2171791-2171897)
chr6 (195-303)||(23896792-23896900)
chr6 (195-301)||(5757010-5757116)
chr6 (140-230)||(6097785-6097877)
chr6 (237-306)||(26253643-26253712)
chr6 (30-116)||(27647692-27647778)
chr6 (86-137)||(5266418-5266469)
chr6 (30-136)||(6097694-6097800)
chr6 (122-230)||(26253698-26253808)
chr6 (215-249)||(6438845-6438879)
chr6 (215-259)||(3809370-3809414)
chr6 (215-259)||(9183456-9183500)
chr6 (203-263)||(31086041-31086101)
[»] chr8 (39 HSPs)
chr8 (73-306)||(1261468-1261703)
chr8 (35-297)||(25689604-25689865)
chr8 (73-303)||(4759590-4759820)
chr8 (85-303)||(36979741-36979958)
chr8 (30-301)||(3439146-3439419)
chr8 (73-303)||(18852683-18852913)
chr8 (85-303)||(30656008-30656226)
chr8 (73-303)||(18870077-18870307)
chr8 (30-306)||(2627372-2627650)
chr8 (141-303)||(33037343-33037505)
chr8 (84-303)||(6311659-6311879)
chr8 (83-306)||(26288239-26288463)
chr8 (83-306)||(26301496-26301720)
chr8 (83-306)||(26313490-26313714)
chr8 (83-297)||(10688661-10688876)
chr8 (75-303)||(7289483-7289713)
chr8 (174-303)||(10683795-10683924)
chr8 (36-303)||(42575582-42575853)
chr8 (74-273)||(25327750-25327950)
chr8 (141-277)||(15290224-15290362)
chr8 (141-277)||(15470593-15470731)
chr8 (237-306)||(31042962-31043031)
chr8 (174-251)||(35745793-35745870)
chr8 (74-279)||(39784404-39784611)
chr8 (195-303)||(7412787-7412895)
chr8 (124-230)||(31043017-31043125)
chr8 (215-263)||(15212460-15212508)
chr8 (73-137)||(33037490-33037554)
chr8 (29-68)||(1746477-1746516)
chr8 (215-250)||(1746665-1746700)
chr8 (215-250)||(34256951-34256986)
chr8 (29-66)||(17982525-17982562)
chr8 (29-66)||(19948580-19948617)
chr8 (215-260)||(22975993-22976038)
chr8 (29-66)||(31218129-31218166)
chr8 (203-263)||(5702049-5702109)
chr8 (215-263)||(30143016-30143064)
chr8 (215-263)||(42435655-42435703)
chr8 (215-263)||(43036097-43036145)
[»] scaffold0491 (3 HSPs)
scaffold0491 (30-306)||(11422-11699)
scaffold0491 (140-306)||(9087-9254)
scaffold0491 (30-136)||(8996-9102)
[»] chr4 (36 HSPs)
chr4 (83-303)||(24742301-24742521)
chr4 (29-306)||(13992545-13992825)
chr4 (30-306)||(31495570-31495848)
chr4 (84-303)||(51520775-51520994)
chr4 (140-297)||(29761039-29761196)
chr4 (122-306)||(28468031-28468217)
chr4 (37-303)||(8393038-8393305)
chr4 (75-303)||(56141567-56141797)
chr4 (37-303)||(8395247-8395514)
chr4 (37-303)||(7122323-7122591)
chr4 (37-303)||(5135705-5135973)
chr4 (37-303)||(5137931-5138199)
chr4 (74-303)||(9228742-9228972)
chr4 (174-303)||(5733061-5733191)
chr4 (74-303)||(9223955-9224185)
chr4 (74-303)||(18712311-18712541)
chr4 (175-303)||(7124545-7124673)
chr4 (74-279)||(18856023-18856230)
chr4 (174-251)||(45347425-45347502)
chr4 (174-251)||(45356906-45356983)
chr4 (174-303)||(3814421-3814549)
chr4 (237-306)||(31985181-31985250)
chr4 (122-230)||(31985236-31985346)
chr4 (122-251)||(8689078-8689208)
chr4 (198-263)||(16628441-16628506)
chr4 (215-263)||(54882496-54882544)
chr4 (74-137)||(3814320-3814383)
chr4 (215-250)||(5370522-5370557)
chr4 (201-263)||(3778014-3778076)
chr4 (83-137)||(29761001-29761055)
chr4 (215-249)||(45357002-45357036)
chr4 (215-260)||(52095807-52095852)
chr4 (215-263)||(2209176-2209224)
chr4 (215-263)||(5429354-5429402)
chr4 (215-263)||(26176070-26176118)
chr4 (215-259)||(26363725-26363769)
[»] scaffold0137 (1 HSPs)
scaffold0137 (37-279)||(5938-6183)
[»] scaffold0188 (1 HSPs)
scaffold0188 (167-306)||(17485-17624)
[»] scaffold0286 (2 HSPs)
scaffold0286 (167-308)||(21991-22132)
scaffold0286 (30-136)||(22146-22252)
[»] scaffold1519 (2 HSPs)
scaffold1519 (83-306)||(536-760)
scaffold1519 (29-66)||(789-826)
[»] scaffold0565 (1 HSPs)
scaffold0565 (37-303)||(2862-3129)
[»] scaffold0674 (1 HSPs)
scaffold0674 (121-279)||(4071-4231)
[»] scaffold0355 (1 HSPs)
scaffold0355 (84-303)||(3393-3613)
[»] scaffold0665 (1 HSPs)
scaffold0665 (164-297)||(8098-8230)
[»] scaffold0135 (1 HSPs)
scaffold0135 (74-254)||(34659-34840)
[»] scaffold0259 (1 HSPs)
scaffold0259 (73-251)||(1847-2026)
[»] scaffold0028 (1 HSPs)
scaffold0028 (73-251)||(148552-148731)
[»] scaffold0464 (2 HSPs)
scaffold0464 (174-279)||(760-866)
scaffold0464 (215-249)||(707-741)
[»] scaffold0197 (2 HSPs)
scaffold0197 (174-251)||(13892-13969)
scaffold0197 (173-251)||(18772-18850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (174-251)||(176558-176635)
[»] scaffold0140 (1 HSPs)
scaffold0140 (237-306)||(7965-8034)
[»] scaffold0006 (1 HSPs)
scaffold0006 (122-297)||(132815-132991)
[»] scaffold0510 (1 HSPs)
scaffold0510 (195-303)||(1140-1248)
[»] scaffold0087 (1 HSPs)
scaffold0087 (195-301)||(43493-43599)
[»] scaffold0098 (1 HSPs)
scaffold0098 (203-263)||(45666-45726)
[»] scaffold0002 (2 HSPs)
scaffold0002 (215-250)||(434218-434253)
scaffold0002 (29-66)||(434405-434442)
[»] scaffold0176 (1 HSPs)
scaffold0176 (215-263)||(17710-17758)
[»] scaffold0066 (1 HSPs)
scaffold0066 (215-263)||(20861-20909)


Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 24789756 - 24789480
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccc--cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgt 127  Q
    |||||||||||||||||||||||||  ||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24789756 agttgctccctttgatttcccaagt--ctctctcttccaacctctccttcaaagatgcacaagaacactttatatactagccttcctctgaagcaatcgt 24789659  T
Q  128 gtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga 227  Q
    |||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24789658 gtcacgatttccaaatcgtgtcaagatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacga 24789559  T
Q  228 tttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  24789558 tttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattc 24789480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 86 - 306
Target Start/End: Complemental strand, 1533177 - 1532957
Alignment:
Q  86 acaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcctt 185  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| || ||| |||||||||||| |||   |||||||||| ||||||||||    
T  1533177 acaagaacactatatatactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgtgtatgtcccaaggtataaccagtcctt 1533078  T
Q  186 gtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaa 285  Q
     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||    
T  1533077 atcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacctcaaaa 1532978  T
Q  286 tcgcgtcacgatgccaaattc 306  Q
    ||  |||||||||||||||||    
T  1532977 tcatgtcacgatgccaaattc 1532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 83 - 303
Target Start/End: Original strand, 2058329 - 2058548
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  |||||||| |||||||||||||||||||||| |||||||| || ||| ||||||||||||||||| |||||||||||||||||||    
T  2058329 tgcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtc 2058428  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||| |     
T  2058429 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctc- 2058527  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  2058528 aaatcgtgtcacgatgccaaa 2058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 83 - 305
Target Start/End: Original strand, 21646365 - 21646588
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| ||||||||||||   |||||||||||||||| || ||| || |||||||||  |||||  ||||||||||||||||    
T  21646365 tgcacaagaacacttaa-atactagccttcctctgataaaatcgtgtcacgatttccagatcgtggcacgatttgaacgtacgtcccaaggtatgaccag 21646463  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    | ||| ||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  21646464 ttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 21646563  T
Q  281 cgaaatcgcgtcacgatgccaaatt 305  Q
    |||||||| ||||||||||||||||    
T  21646564 cgaaatcgtgtcacgatgccaaatt 21646588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 20343719 - 20343558
Alignment:
Q  140 aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatc 239  Q
    ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||    
T  20343719 aaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatc 20343620  T
Q  240 gtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgcca 301  Q
    ||| |||||||| ||| || |||||||||||||||||||| |||||||| ||||||||||||    
T  20343619 gtgacacgattttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgcca 20343558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 122 - 306
Target Start/End: Original strand, 18409159 - 18409345
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||| ||| || |||||||||| |  |||||  | ||||||| ||||||||||| ||| ||| ||||||| ||||||||| | |||||    
T  18409159 aatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgagaatcg 18409258  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||||    
T  18409259 tgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaaattc 18409345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 305
Target Start/End: Original strand, 25767214 - 25767491
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||| ||||| |||||||||||    | ||||||||   ||||||||||||||| | ||||| | |||||  |||   |||||||    
T  25767214 agttgctccctttgatttctcaagtttctctctcttcagctctccttcaaaatctgcacaagaacacttaa-atactagtcttccattgataaaatcgtg 25767312  T
Q  129 tcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||| || |||||||||| |  |||||  | ||||| | |||| |||||| ||   || ||||||||||||||||| | ||||||||||||    
T  25767313 tcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggcacgacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacg 25767412  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaatt 305  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||    
T  25767413 atttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatt 25767491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Original strand, 6594816 - 6595081
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc-cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgat 135  Q
    ||||||||||||||||||  ||||||||||||||| | |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||||    
T  6594816 ccctttgatttcccaagt--ctctctcttccaacctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgat 6594912  T
Q  136 tttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttccca 234  Q
    ||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| ||     
T  6594913 tttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttccc 6595012  T
Q  235 agatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  6595013 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaa 6595081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 21640205 - 21640367
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcg 240  Q
    |||| ||||||||||||||| |   |||||| ||||||||||||| |||  ||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  21640205 aatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcg 21640304  T
Q  241 tgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||||||||||  ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  21640305 tgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaa 21640367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 306
Target Start/End: Complemental strand, 39731172 - 39730987
Alignment:
Q  123 atcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgt 220  Q
    ||||||||||||||| || ||| |||||||||| |  |||||  ||||||||| ||||||||||| ||| ||| |||||||||||||||||   ||||||    
T  39731172 atcgtgtcacgatttccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgt 39731073  T
Q  221 gtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||| |||||||||||||||||    
T  39731072 gtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattc 39730987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 43504526 - 43504667
Alignment:
Q  165 cccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaac 264  Q
    ||||||||| ||||||||||| ||| ||| |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||     
T  43504526 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaa 43504625  T
Q  265 ctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    | ||||||||||| |||||||||| |||||||||||||||||    
T  43504626 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 43504667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 279
Target Start/End: Original strand, 18392454 - 18392701
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccctt------caaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtc 130  Q
    ||||||||||||||||||  |||||||||||||| || ||      ||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||    
T  18392454 ccctttgatttcccaagt--ctctctcttccaactcctttactctccaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtc 18392550  T
Q  131 acgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatt 229  Q
    |||||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18392551 acgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatt 18392650  T
Q  230 tcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    | || | |||||||||||| || ||||||||||| ||||||||||||||||    
T  18392651 ttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacc 18392701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 303
Target Start/End: Original strand, 6592598 - 6592865
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  ||||||||||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  6592598 ccctttgatttcccaagt--ctctctcttccaacctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 6592694  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| |    
T  6592695 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttc 6592794  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    | | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  6592795 ccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaa 6592865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 20357238 - 20357084
Alignment:
Q  149 cacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacga 248  Q
    ||||||||||||   ||||||||| ||||| |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  20357238 cacgatttgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacga 20357139  T
Q  249 tttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||  ||||||| |||||||||||||||  ||||||| ||||||||||||||    
T  20357138 tttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaa 20357084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 37 - 251
Target Start/End: Original strand, 1562262 - 1562479
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccc---ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||| ||||||| ||||||||||||||| |   ||||||||  ||||||||||||| | | ||||| | |||||||||   |||||||||||||    
T  1562262 ccctttgattccccaagtctctctctcttccaactctctccttcaaatctgcacaagaacacataa-atactagtcttcctctgttccaatcgtgtcacg 1562360  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  | ||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  1562361 attttcccaatcgtgtcacgatttgcgtccgtcacaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttac 1562460  T
Q  233 caagatcgtgtcacgattt 251  Q
    ||| |||||| ||||||||    
T  1562461 caaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 306
Target Start/End: Original strand, 18414039 - 18414221
Alignment:
Q  126 gtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtc 223  Q
    |||||||||||| ||| || |||||||||| |  |||||  | ||||||| ||||||||||| ||| ||| ||||||| ||||||||| | ||||||||     
T  18414039 gtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtt 18414138  T
Q  224 acgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| | |||||||||||||||    
T  18414139 acgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaaattc 18414221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 37 - 261
Target Start/End: Original strand, 18389018 - 18389246
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccctt------caaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtc 130  Q
    ||||||||||||||||||  |||||||||||||| || ||      ||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||    
T  18389018 ccctttgatttcccaagt--ctctctcttccaactcctttactctccaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtc 18389114  T
Q  131 acgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatt 229  Q
    |||||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18389115 acgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatt 18389214  T
Q  230 tcccaagatcgtgtcacgatttggcaccctgc 261  Q
    | || | |||||||||||| || |||||||||    
T  18389215 ttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 98 - 303
Target Start/End: Original strand, 12406595 - 12406801
Alignment:
Q  98 tatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggata 195  Q
    |||||||| | |||||||||||| ||||||| |||||||| |  ||||| |||||||||||||     |||||||||| ||| ||||||| |||  ||||    
T  12406595 tatatactagtcttcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgata 12406693  T
Q  196 cttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacg 295  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  | ||||| ||||||||||||  |  ||||||| ||||||    
T  12406694 cttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacg 12406793  T
Q  296 atgccaaa 303  Q
    ||||||||    
T  12406794 atgccaaa 12406801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 48408591 - 48408452
Alignment:
Q  167 caaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacct 266  Q
    ||||||| ||||||||||| ||   || |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||| |     
T  48408591 caaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaacc 48408492  T
Q  267 agctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||| ||| |||||| |||||||||||||||||    
T  48408491 agctcacggcatcacaaaatcgtgtcacgatgccaaattc 48408452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 303
Target Start/End: Original strand, 4873435 - 4873665
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| |  | ||| |||||||||||||     ||||||||    
T  4873435 cttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaagg 4873534  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
     | ||| ||||||| |||  |||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||  ||||||| ||| ||     
T  4873535 aa-gacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatctt 4873633  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||  |  ||||||| ||||||||||||||    
T  4873634 acggccacttgaaatcgtgtcacgatgccaaa 4873665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 32060670 - 32060832
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcg 240  Q
    |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| || | ||||    
T  32060670 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcg 32060769  T
Q  241 tgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  32060770 tgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaa 32060832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 24024004 - 24023907
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    |||||||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||    
T  24024004 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctc 24023907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 84 - 239
Target Start/End: Original strand, 12397229 - 12397385
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||||||  |||||||| |  ||||||||||| ||||||| |||||||| |  ||||| |||||||||||||     |||||||||| ||| |||    
T  12397229 gcacaagaacacaatatatactagtattcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagt 12397327  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatc 239  Q
    |||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||    
T  12397328 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 12397385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 21811924 - 21811835
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||  |||||||||| ||||||||||   ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  21811924 tgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 21811835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 24261006 - 24260929
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  24261006 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 24260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 31109357 - 31109167
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| |  | ||| ||||||||| |||      |||||||    
T  31109357 cttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaagg 31109258  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
     | ||| ||||||| |||   ||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||  |||||||    
T  31109257 ca-gacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 31109167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 303
Target Start/End: Original strand, 2479683 - 2479903
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| ||||||| | ||||  ||||   ||||||| |||| ||| ||||||||| || ||||  ||||||| |||||||||| |||||     
T  2479683 tgcacaagaacactt-atatactagtcttcaactgataaaatcgtgccacgttttccaaatcatgccatgattgatgcgtacgacccaaggtacgaccaa 2479781  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
     |||| ||  | | ||||||| | ||||||| | |||||||| |||||||| ||| |||||| ||||||||| |||||||||| | |||||||||||  |    
T  2479782 -ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcatta 2479880  T
Q  281 cgaaatcgcgtcacgatgccaaa 303  Q
      |||||| ||||||||||||||    
T  2479881 gaaaatcgtgtcacgatgccaaa 2479903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 39731284 - 39731158
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttc-aaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | |||| |||  ||||||||||||| ||| ||||| |||||||  |||   |||||||    
T  39731284 agttactccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcacaagaacac-ttaaatactagccttccattgataaaatcgtg 39731186  T
Q  129 tcacgattttcaaatcatgtcacgattt 156  Q
    |||||||||||| ||| |||||||||||    
T  39731185 tcacgattttcagatcgtgtcacgattt 39731158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 24265862 - 24265785
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  24265862 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24265785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 16880475 - 16880552
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  || ||||||| ||||||||||  ||||||||||| |||||||||||||||| ||||||||    
T  16880475 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattt 16880552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 16885330 - 16885407
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  || ||||||| ||||||||||  ||||||||||| |||||||||||||||| ||||||||    
T  16885330 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattt 16885407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 47264102 - 47264210
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||||| ||  || ||| ||||||||| |||||| ||| | |||||||| ||  || |||||| |||||    
T  47264102 acttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcac 47264201  T
Q  295 gatgccaaa 303  Q
    |||||||||    
T  47264202 gatgccaaa 47264210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 43504408 - 43504514
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| |||||||||||||||||  |||||||  |||||| |||||| ||| ||||| ||| ||| ||||   |||||||    
T  43504408 agtttctccctttgatttcccaagtttctctctcttccaacccttcttcaaatctgcacaggaacac-ttaaatactagccctccactgataaaatcgtg 43504506  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  43504507 tcacgatt 43504514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 48408710 - 48408673
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttcc 67  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  48408710 agttgctccctttgatttcccaagtttctctctcttcc 48408673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 4538997 - 4539041
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccct 259  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||    
T  4538997 aatcgtgtcacgttttcccaaaatcgtgtcacgattaggcaccct 4539041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 47674389 - 47674437
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  47674389 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 47674437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 47676582 - 47676630
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  47676582 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 47676630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 4178496 - 4178461
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4178496 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 4178461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 20343812 - 20343723
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaa----cccccttcaaagatgcacaagaacactttatatactggccttcctctg 117  Q
    ||||||||||||||||| ||||||| ||||||||||||||    | | |||||||  |||||||||||||||  |||||| | |||||||||    
T  20343812 agttgctccctttgattccccaagtctctctctcttccaaaactctctcttcaaatctgcacaagaacactt--tatactagtcttcctctg 20343723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 3050495 - 3050555
Alignment:
Q  122 aatcgtgtcacgatttt-caaatcatgtcacgatt--tgcgtaccacccaaggtatgacca 179  Q
    ||||||||||||||||| ||||| |||||||||||  ||||||| |||||||||| |||||    
T  3050495 aatcgtgtcacgattttccaaatgatgtcacgattgatgcgtacgacccaaggtacgacca 3050555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 23554761 - 23554716
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 260  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||    
T  23554761 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 23554716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 24515019 - 24515056
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  24515019 aagttgcttcctttgatttcccaagtttctctctcttc 24515056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 4796287 - 4796239
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| ||| |||| ||||||||||||||  |||||||||||    
T  4796287 aatcgtgtcacgtttttccaaaatcgtgtcacgattgagcaccctgcaa 4796239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 6360576 - 6360624
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| || ||||| |||||||||| ||| ||||||||||||    
T  6360576 aatcgtgtcacgtttccccaaaatcgtgtcacaattgggcaccctgcaa 6360624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 20357284 - 20357240
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||  |||||||| | ||||||||||||||||||||    
T  20357284 gcacaagaacacaatatatactagtcttcctctgaagcaatcgtg 20357240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 24261059 - 24261023
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  24261059 aatcgtgccacgatttccctagatcgtgtcacgattt 24261023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 20622491 - 20622767
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccccc-ttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  20622491 agttgctccatttgatttcccaagt--ctctctcttccaaccccccttcaaagatgcacaagaacactttatatactagccttcctctgaagcaattgtg 20622588  T
Q  129 tcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga 227  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20622589 tcacgattttccaaatcatgccacgatttgcgtaccacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacga 20622688  T
Q  228 tttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  20622689 tttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattc 20622767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 40282292 - 40282012
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgt 127  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||  |||||  ||||||||||||||| | ||||  ||||||| ||||   ||||||    
T  40282292 agttgctccctttgatttcccaagtttctctctcttccaactctctcttcaaatctgcacaagaacacttaa-atacatgccttccactgataaaatcgt 40282194  T
Q  128 gtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagttt-cacaatcgtgtca 224  Q
    |||||||||| |  ||| ||||||||||  ||| | |  ||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||    
T  40282193 gtcacgatttcctgatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtca 40282094  T
Q  225 cgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  40282093 cgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattc 40282012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 85 - 297
Target Start/End: Complemental strand, 24793921 - 24793709
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcct 184  Q
    |||||||||||  |||||||| | |||||||||||||||||||| |||||||| || ||| |||||||||||||||   ||||||||| |||||||||||    
T  24793921 cacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtcct 24793822  T
Q  185 tgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaa 284  Q
    | ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||| ||||    
T  24793821 tatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaa 24793722  T
Q  285 atcgcgtcacgat 297  Q
    |||| ||||||||    
T  24793721 atcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 73 - 279
Target Start/End: Complemental strand, 24787111 - 24786905
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||||| | ||||||||||||  |||||||| | |||||||||||||||||||| |||||||| || ||| |||||||||||||||   |||||||||    
T  24787111 ccttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggt 24787012  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
     |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  24787011 ttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctca 24786912  T
Q  273 cggcacc 279  Q
    |||||||    
T  24786911 cggcacc 24786905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 9036326 - 9036059
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    |||||||||||||||||| |||||||||| ||| | |||  |||||  |||||||||||||||||||  || | |||||||||  | |||||||||||||    
T  9036326 ccctttgatttcccaagtctctctctctttcaaactcctcttcaaatctgcacaagaacactttata--ctagtcttcctctgttgaaatcgtgtcacga 9036229  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttccc 233  Q
    |||||  |||| ||||||||| |||||| ||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||  |    
T  9036228 ttttcccaatcgtgtcacgatctgcgtaacacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaac 9036129  T
Q  234 aagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || || ||| ||||| || ||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  9036128 aaaatagtgacacgaatttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaa 9036059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 21053873 - 21053593
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccccc--ttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgt 127  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |  ||||||  ||||||||||||||| | ||||  ||||||| ||||   ||||||    
T  21053873 agttgctccctttgatttcccaagtctctctctcttccaactctcacttcaaatctgcacaagaacacttaa-atacatgccttccactgataaaatcgt 21053775  T
Q  128 gtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagttt-cacaatcgtgtca 224  Q
    |||||||||| |  ||| ||||||||||  ||| | |  | ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||    
T  21053774 gtcacgatttcctgatcgtgtcacgattggtgcatccgtctcaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtca 21053675  T
Q  225 cgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||  ||||||||||||||||||||| ||||  ||||||||| |||||||||||||| |||||||||||||||||    
T  21053674 cgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactgcaccacgaaatcgtgtcacgatgccaaattc 21053593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 9987117 - 9986839
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| | ||||||||||||| | ||||||||  ||||||||||||||| | ||||| ||| ||| ||||   ||| |||    
T  9987117 agttgctccctttgatttcccaagtctatctctcttccaactcaccttcaaatctgcacaagaacacttaa-atactagccctccactgataaaattgtg 9987019  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| || ||| ||||||||||  ||| | |  ||||||||||||||||||||| | | ||| |||||||||||||||||   ||||||||||||    
T  9987018 tcacgatttccagatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacg 9986919  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||| |||||||||||||||||||| |||||  | |||||||||||||||||||||| || |||||| |||||||    
T  9986918 atttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattc 9986839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 83 - 306
Target Start/End: Complemental strand, 19366046 - 19365822
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| | ||||| ||||   |||||||||||||||| ||| || |||||||||| |  |||||  | ||| ||| |||| |    
T  19366046 tgcacaagaacacttaa-atactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaatgtacgacctg 19365948  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||||| ||  ||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  19365947 tccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 19365848  T
Q  281 cgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||| |||||||||||||||||    
T  19365847 caaaatcgtgtcacgatgccaaattc 19365822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 51765183 - 51765044
Alignment:
Q  167 caaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacct 266  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||   ||||||||||||||| | ||||||||||||||||||||||||||||||| |     
T  51765183 caaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc 51765084  T
Q  267 agctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||| |||||||||| ||||||||| |||||||    
T  51765083 agctcacggcatcacgaaatcgtgtcacgatgtcaaattc 51765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 279
Target Start/End: Complemental strand, 44203542 - 44203297
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccc----ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||||  |||||||||||||| |    ||||||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||    
T  44203542 ccctttgatttcccaagt--ctctctcttccaactctcacccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcac 44203446  T
Q  133 gattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    |||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||     
T  44203445 gattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttt 44203346  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    || | |||||| |||||||||   |||||||| ||||||||||||||||    
T  44203345 cccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcacc 44203297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 19361105 - 19360966
Alignment:
Q  167 caaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacct 266  Q
    ||||||| |||| |||||| ||  ||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  19361105 caaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 19361006  T
Q  267 agctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||| ||| |||||| |||||||| ||||||||    
T  19361005 agctcacggcatcacaaaatcgtgtcacgataccaaattc 19360966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 230
Target Start/End: Complemental strand, 24202509 - 24202360
Alignment:
Q  82 atgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgacca 179  Q
    |||||||||||||||| | ||||| ||||||||||||  ||||||||||||||||| || ||| ||||||||||||  ||| |  |||||| ||||||||    
T  24202509 atgcacaagaacacttaa-atactagccttcctctgatacaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtgcgtcccaagatatgacca 24202411  T
Q  180 gtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 230  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  24202410 gtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 74 - 277
Target Start/End: Original strand, 41398555 - 41398759
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||| |||     |||| |||    
T  41398555 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccagg 41398654  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    | |||||||||||| |||| ||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| || ||||    
T  41398655 t-tgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctc 41398753  T
Q  272 acggca 277  Q
    ||||||    
T  41398754 acggca 41398759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 303
Target Start/End: Original strand, 41390900 - 41391129
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||| |||     |||| |||    
T  41390900 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccagg 41390999  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    | |||||||||||| |||  ||||||||| |||||||||||  |||| ||||||||||||||||||||||| |||||||||||  ||||||| || ||||    
T  41391000 t-tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctc 41391098  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||| | | |||||| |||||||| |||||    
T  41391099 acggcatctc-aaatcgtgtcacgattccaaa 41391129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 1054699 - 1054593
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aacctagctca 272  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||| ||| | |||||    
T  1054699 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 1054600  T
Q  273 cggcacc 279  Q
    |||||||    
T  1054599 cggcacc 1054593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 24202374 - 24202305
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  24202374 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 24202305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 39445897 - 39446026
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aacctagctca 272  Q
    |||||||||||| |||  |||||||||||||||||||||   ||||||||| ||||||||||||||||| |||||||||||  ||||| ||| | |||||    
T  39445897 tgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 39445996  T
Q  273 cggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||| | | |||||| |||||||| |||||    
T  39445997 cggcatctc-aaatcgtgtcacgattccaaa 39446026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 44023562 - 44023456
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aacctagctca 272  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||| ||| || || ||| | |||||    
T  44023562 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 44023463  T
Q  273 cggcacc 279  Q
    |||||||    
T  44023462 cggcacc 44023456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 25439584 - 25439495
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||  |||||||||| ||||||||||   ||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  25439584 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaa 25439495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 43988134 - 43988057
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||| ||||||||||| ||||||||    
T  43988134 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattt 43988057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 51765303 - 51765197
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttc-aaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| |||| |||||||||| |||||| |||  ||||||||||||| ||| ||||| ||||||| ||||   |||||||    
T  51765303 agttactccctttgatttcccaagtttctcactcttccaactcccttcaaaatctgcacaagaacac-ttaaatactagccttccactgataaaatcgtg 51765205  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  51765204 tcacgatt 51765197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 13604334 - 13604158
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||| |||| ||| |||||| ||||||||||  | ||||| |||||||||| |||||  |||| ||  | | ||||||| ||||||||| | ||||     
T  13604334 aatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatca 13604236  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    |||||||||| | ||| |||||||||||||||| ||| |||||| | |||||||| || ||| |||||| | ||||||    
T  13604235 tgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgat 13604158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 25444777 - 25444700
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| | ||||||||   ||||||||||||||||||||||||||| ||||||||    
T  25444777 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattt 25444700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 28220673 - 28220721
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  28220673 aatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaa 28220721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 28223868 - 28223916
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  28223868 aatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaa 28223916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 250
Target Start/End: Original strand, 3282092 - 3282221
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||| |||||||||| || |||||||  ||||||| ||||||||||||||||  |||| ||  | | || || | ||||||||| | |||||    
T  3282092 aatcgtgtcacgtttttcaaatcgtggcacgattggtgcgtacgacccaaggtatgacca-accttatcttgaaaacgtacccagcaagtttgaaaatcg 3282190  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||| |||| ||| |||||| |||||||    
T  3282191 tgtcacgttttctcaaaatcgtgacacgatt 3282221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 3156589 - 3156541
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||| | | |||||||| |||||||||||||||||||||||||||    
T  3156589 aatcgtgttatgttttcccaaaatcgtgtcacgatttggcaccctgcaa 3156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 31658956 - 31658912
Alignment:
Q  219 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||    
T  31658956 gtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaa 31658912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 20762393 - 20762358
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20762393 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 20762358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 1054752 - 1054718
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgat 249  Q
    ||||||||||||||||||| |||||||||||||||    
T  1054752 aatcgtgtcacgatttccctagatcgtgtcacgat 1054718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 13316577 - 13316614
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  13316577 aagttgctacctttgatttcccaagtttctctctcttc 13316614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 20762581 - 20762544
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  20762581 aagttgcttcctttgatttcccaagtttctctctcttc 20762544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 24202472 - 24202435
Alignment:
Q  213 acaatcgtgtcacgatttcccaagatcgtgtcacgatttg 252  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  24202472 acaatcgtgtcacgatttcc--agatcgtgtcacgatttg 24202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 49918071 - 49918023
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| ||| | || |||||||||||||| ||||||||||||    
T  49918071 aatcgtgtcacgtttttcgaaaatcgtgtcacgattgggcaccctgcaa 49918023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 1e-84; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 29751413 - 29751615
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29751413 agttgctccctttgatttcccaagtctctctctcttccaactctccttcaaagatgcacaagaacactttatatactagccttcctctaaagcaatcgtg 29751512  T
Q  129 tcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga 227  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29751513 tcacgattttccaaatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacga 29751612  T
Q  228 ttt 230  Q
    |||    
T  29751613 ttt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 77 - 306
Target Start/End: Original strand, 24136201 - 24136430
Alignment:
Q  77 caaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatga 176  Q
    |||| |||||||||||||||||||||||| || |||||||||  |||||||| |||||||| || ||| |||||||||||||||||  ||||||||||||    
T  24136201 caaaaatgcacaagaacactttatatactagctttcctctgatacaatcgtgccacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatga 24136300  T
Q  177 ccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggc 276  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24136301 ccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggc 24136400  T
Q  277 accacgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||||| | |||||||||||||||||    
T  24136401 atcacgaaattgtgtcacgatgccaaattc 24136430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 26177798 - 26177520
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | |||||||   ||| ||||||||||| | ||||| ||| ||| ||||   |||||||    
T  26177798 agttactccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcgcaagaacacttaa-atactagccctccactgataaaatcgtg 26177700  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||  || ||||||||||  ||||| |  ||||||||| ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  26177699 tcacgatttccaggtcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 26177600  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  26177599 atttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 26177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 27445291 - 27445510
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    ||||||||||||  |||||||| |||||||||||||||||||||| |||||||| | ||||| |||||||||||||||   |||||||||| ||||||||    
T  27445291 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 27445389  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||  |    
T  27445390 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttg 27445489  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  27445490 aaatcgtgtcacgatgccaaa 27445510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 27450134 - 27450353
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    ||||||||||||  |||||||| |||||||||||||||||||||| |||||||| | ||||| |||||||||||||||   |||||||||| ||||||||    
T  27450134 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 27450232  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||  |    
T  27450233 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttg 27450332  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  27450333 aaatcgtgtcacgatgccaaa 27450353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10593167 - 10592900
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    |||||||||||||||||| ||||||||||||||| | ||  |||||  ||||||||||||||| | ||||| | |||||||||  | |||||||||||||    
T  10593167 ccctttgatttcccaagtctctctctcttccaactctctcttcaaatctgcacaagaacactt-acatactagtcttcctctgttgaaatcgtgtcacga 10593069  T
Q  135 ttttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttccc 233  Q
    ||| | ||||| ||||||||| ||||||||||| |||  | ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| ||    
T  10593068 tttcccaaatcgtgtcacgatctgcgtaccaccgaagaaacgaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcc 10592969  T
Q  234 aagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
     | |||||| |||||||| ||||||||||||||| ||||||||||| || ||||| |||||||| |||||    
T  10592968 caaatcgtgccacgattttgcaccctgcaacctatctcacggcacc-cggaatcgtgtcacgataccaaa 10592900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 9789477 - 9789755
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||||||||  ||||||||||||||| | ||||| ||| ||| ||||   |||||||    
T  9789477 agttactccctttgatttcccaagtttctctctcttccaactctccttcaaatctgcacaagaacacttaa-atactagccctccactgataaaatcgtg 9789575  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||||||  || |||||||| |  ||||| |  | ||||  | ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  9789576 tcacgattttcaggtcgtgtcacgaatggtgcgttcgtcgcaagaaacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacg 9789675  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  9789676 atttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 9789755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 18441901 - 18442179
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||||||||  ||||||||||||||| | ||||| ||| ||| ||||   |||||||    
T  18441901 agttactccctttgatttcccaagtttctctctcttccaactctccttcaaatctgcacaagaacacttaa-atactagccctccactgataaaatcgtg 18441999  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||  || ||||||||||  ||||| |  ||||||  | ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  18442000 tcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 18442099  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||||||||| || ||||||| |||||||||||||||||    
T  18442100 atttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattc 18442179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 85 - 276
Target Start/End: Original strand, 43599043 - 43599234
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcc 183  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||   |||||||||| |||||||||    
T  43599043 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtcc 43599141  T
Q  184 ttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggc 276  Q
    || ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||    
T  43599142 ttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggc 43599234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 85 - 276
Target Start/End: Original strand, 43604535 - 43604726
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcc 183  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||   |||||||||| |||||||||    
T  43604535 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtcc 43604633  T
Q  184 ttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggc 276  Q
    || ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||    
T  43604634 ttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggc 43604726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 85 - 276
Target Start/End: Original strand, 43610027 - 43610218
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcc 183  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||   |||||||||| |||||||||    
T  43610027 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtcc 43610125  T
Q  184 ttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggc 276  Q
    || ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||    
T  43610126 ttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggc 43610218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 84 - 276
Target Start/End: Original strand, 43592597 - 43592789
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    ||||||||||||  |||||||| ||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||   |||||||||| ||||||||    
T  43592597 gcacaagaacacaatatatactagccttcctccgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 43592695  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggc 276  Q
    ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||    
T  43592696 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggc 43592789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 26170689 - 26170411
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | |||||||   ||||||||||||||| | ||||| ||| ||| ||||   |||||||    
T  26170689 agttactccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcacaagaacacttaa-atactagccctccactgataaaatcgtg 26170591  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||| | ||  || ||||||||||  ||||| |  ||||||||| ||||||||||| ||| ||| |||||||||||||||||   |||  |||||||    
T  26170590 tcacgatatccaggtcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacg 26170491  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||||    
T  26170490 atttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattc 26170411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 29720161 - 29720019
Alignment:
Q  165 cccaaggtatgaccagtccttgtcaaggatacttaacgagcaagttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||     
T  29720161 cccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcag 29720062  T
Q  264 cctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
     |||||||||||||||||||||||| |||||||||||||||||    
T  29720061 actagctcacggcaccacgaaatcgtgtcacgatgccaaattc 29720019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 37 - 279
Target Start/End: Complemental strand, 40380001 - 40379757
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  ||||||||||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  40380001 ccctttgatttcccaagt--ctctctcttccaacctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 40379905  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  40379904 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 40379805  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    | | |||||||||||| || ||||||||||| ||||||||||||||||    
T  40379804 ccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacc 40379757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 37 - 279
Target Start/End: Complemental strand, 40382212 - 40381968
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  ||||||||||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  40382212 ccctttgatttcccaagt--ctctctcttccaacctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 40382116  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  40382115 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 40382016  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    | | |||||||||||| || ||||||||||| ||||||||||||||||    
T  40382015 ccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacc 40381968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 22536633 - 22536794
Alignment:
Q  140 aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatc 239  Q
    ||||| ||||||||| || ||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||     
T  22536633 aaatcgtgtcacgatctgtgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatt 22536732  T
Q  240 gtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgcca 301  Q
    ||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  22536733 gtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgcca 22536794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 37 - 279
Target Start/End: Complemental strand, 16546540 - 16546295
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacc----cccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||  |||||||||||||||||     ||||||||  ||||||||||||| |||  |||| | |||||||||   ||||||||||||    
T  16546540 ccctttgatttcccaa--gtctctctcttccaacctcttgccttcaaatctgcacaagaacac-ttaagtactagtcttcctctgttccaatcgtgtcac 16546444  T
Q  133 gatttt-caaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    |||||| | |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||     
T  16546443 gattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 16546344  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    || | |||||||||||| || ||||||||||| ||||||||||||||||    
T  16546343 cccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacc 16546295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 84 - 297
Target Start/End: Original strand, 31180573 - 31180787
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaa--tcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||||||  |||||||| | |||||||||||||||||||| |||||||| | ||  ||||||||||||||||||   ||||||||| ||||||||    
T  31180573 gcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggt-tgaccagt 31180671  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccac 281  Q
    |||| |||  ||||||||||||| |||| ||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||| ||||      
T  31180672 ccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacacctt 31180771  T
Q  282 gaaatcgcgtcacgat 297  Q
    ||||||| ||||||||    
T  31180772 gaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 25078029 - 25077762
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacc---cccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  |||||||||||||||   |||||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  25078029 ccctttgatttcccaagt--ctctctcttccaacctctcccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 25077933  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  25077932 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcc 25077833  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||  |||||| |||||||||   |||| ||| |||||||||||||||| |  |||||||||||||| |||||    
T  25077832 cacaatcgtgacacgatttgcacccctacaaccctagctcacggcacctc-caatcgcgtcacgatcccaaa 25077762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 25135998 - 25135731
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacc---cccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  |||||||||||||||   |||||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  25135998 ccctttgatttcccaagt--ctctctcttccaacctctcccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 25135902  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  25135901 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcc 25135802  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||  |||||| |||||||||   |||| ||| |||||||||||||||| |  |||||||||||||| |||||    
T  25135801 cacaatcgtgacacgatttgcacccctacaaccctagctcacggcacctc-caatcgcgtcacgatcccaaa 25135731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 279
Target Start/End: Complemental strand, 16544318 - 16544073
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacc----cccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||  |||||||||||||||||     ||||||||  ||||||||||||| |||  |||| | |||||||||   ||||||||||||    
T  16544318 ccctttgatttcccaa--gtctctctcttccaacctcttgccttcaaatctgcacaagaacac-ttaagtactagtcttcctctgttccaatcgtgtcac 16544222  T
Q  133 gatttt-caaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    |||||| | |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||     
T  16544221 gattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 16544122  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    || | |||||||||||| || |||||||| || |||||||||| |||||    
T  16544121 cccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagcacc 16544073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 1456914 - 1456694
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaat--catgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||||||  |||||||| | |||||||| ||| ||||||| |||||||| | ||   | ||||||||||||| |   |||||||||| ||| |||    
T  1456914 gcacaagaacacaatatatactagtcttcctctaaagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggta-gacaagt 1456816  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccac 281  Q
    |||| ||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| || |||||||||||| ||      
T  1456815 ccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaactagctcacggcccctt 1456716  T
Q  282 gaaatcgcgtcacgatgccaaa 303  Q
    ||||||| ||||||||||||||    
T  1456715 gaaatcgtgtcacgatgccaaa 1456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 30631763 - 30631892
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcac 273  Q
    |||||||||||| |||  |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||  ||||||| || ||||||    
T  30631763 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcac 30631862  T
Q  274 ggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||| |||||||| ||||||||||||||    
T  30631863 ggcacctcgaaatcgtgtcacgatgccaaa 30631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 181 - 306
Target Start/End: Complemental strand, 29722332 - 29722206
Alignment:
Q  181 tccttgtcaaggatacttaacgagcaagttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacc 279  Q
    ||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| ||||  ||||||||| |||||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  280 acgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||| |||||||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattc 29722206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 277
Target Start/End: Original strand, 38219770 - 38219947
Alignment:
Q  102 tactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatactta 199  Q
    |||| ||||||||||||   ||| |||||||||||| |||||| |||||||||| |  |||||  | ||||||| ||||||||||| ||| ||| |||||    
T  38219770 tactagccttcctctgataaaattgtgtcacgatttccaaatcgtgtcacgattggaacgtacgtcacaaggtacgaccagtccttatcatggaaactta 38219869  T
Q  200 acgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggca 277  Q
    || ||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||| | |||||||||||    
T  38219870 acaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggca 38219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 16407836 - 16407695
Alignment:
Q  165 cccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaac 264  Q
    ||||||||| |||| |||||| ||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||||||||||||||||||||||||     
T  16407836 cccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaa 16407737  T
Q  265 ctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    | ||||||||||| ||| |||||| ||||||||| |||||||    
T  16407736 ccagctcacggcatcacaaaatcgtgtcacgatgtcaaattc 16407695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 35388021 - 35388169
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| ||||||||||||   |||||||||||||||| || ||| ||||||||||||  |||||  ||||||||||||||||    
T  35388021 tgcacaagaacacttaa-atactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtacgtcccaaggtatgaccag 35388119  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 230  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||| ||||    
T  35388120 tccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 16409272 - 16409131
Alignment:
Q  165 cccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaac 264  Q
    ||||| ||| ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||||||| |||||||||| |||||     
T  16409272 cccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaa 16409173  T
Q  265 ctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||||| || ||| |||||| |||||||||||||||||    
T  16409172 ccagctcacgacatcacaaaatcgtgtcacgatgccaaattc 16409131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 74 - 303
Target Start/End: Original strand, 15044994 - 15045223
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||| |||     |||| |||    
T  15044994 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggaccccagg 15045093  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    | |||||||||||| |||  ||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| || ||||    
T  15045094 t-tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctc 15045192  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||| | | |||||| |||||||| |||||    
T  15045193 acggcatctc-aaatcgtgtcacgattccaaa 15045223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 29751601 - 29751677
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattcatctcac 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||    
T  29751601 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcac 29751677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 29402717 - 29402606
Alignment:
Q  192 gatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgt 291  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||| |||  |  ||||||| |     
T  29402717 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccacttgaaatcgtgc 29402618  T
Q  292 cacgatgccaaa 303  Q
    ||||||||||||    
T  29402617 cacgatgccaaa 29402606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 29752267 - 29752336
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattc 29752336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 2785686 - 2785854
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    |||||||||||||||| ||||| | | | | |||||| ||||||| |||||||| |  | ||| ||||||||| |||    | ||| |||| ||||||||    
T  2785686 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacgctccccaggt-tgaccagt 2785784  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  2785785 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 2785854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 9352972 - 9352866
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||||| ||  |||||| ||||||||| |||||||||| | |||||||||||  || |||||| |||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 9352873  T
Q  295 gatgcca 301  Q
    |||||||    
T  9352872 gatgcca 9352866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 28807261 - 28807172
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||  |||||||||| | ||||||||   ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28807261 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 28807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 33768586 - 33768663
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  33768586 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 33768663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 33791718 - 33791795
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  33791718 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 33791795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 29720279 - 29720173
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaac-ccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||||  ||||||||||||| ||| ||||  ||||||| ||||   |||||||    
T  29720279 agttgctccctttgatttcccaagtttctctctcttccaactctccttcaaatttgcacaagaacac-ttaaatacatgccttccactgataaaatcgtg 29720181  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  29720180 tcacgatt 29720173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 15465002 - 15465071
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||||    
T  15465002 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattc 15465071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 29722439 - 29722332
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaac-ccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||| ||||||| | ||||||||  ||||||||||||| ||| ||||  ||||||| ||||   |||||||    
T  29722439 agttgctccctttgatttcccaagtttctctcttttccaactctccttcaaatctgcacaagaacac-ttaaatacatgccttccactgataaaatcgtg 29722341  T
Q  129 tcacgattt 137  Q
    |||||||||    
T  29722340 tcacgattt 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 37561130 - 37561054
Alignment:
Q  176 accagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttg 252  Q
    |||||||||| |||  |||||||||| ||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttg 37561054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 36931966 - 36931897
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||| | |||||||| || ||| |||||| | |||||||||||||||    
T  36931966 atcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattc 36931897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 37556308 - 37556232
Alignment:
Q  176 accagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttg 252  Q
    |||||||||| |||  |||||||||| ||||||||||   |||||||||| |||||||||||||||| |||||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttg 37556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 31396675 - 31396598
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  || ||||||| | ||||| ||  |||||||||||||||||||||||||||| ||||||||    
T  31396675 tgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattt 31396598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 31401532 - 31401455
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  || ||||||  ||||||||||  |||| ||||||||||||||||||||||| ||||||||    
T  31401532 tgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattt 31401455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 16409390 - 16409322
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttc-aaagatgcacaagaacactt 97  Q
    |||| |||||||||||||||||||| ||||||||||||||| | |||| |||  |||||||||||||||    
T  16409390 agttactccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcacaagaacactt 16409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 42428864 - 42428912
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  42428864 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 42428912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 16407954 - 16407848
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttc-aaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| ||||||||||||| |||||| ||||||||||||||| | |||| |||  |||||||||| || ||| ||||| ||| ||| ||||   |||||||    
T  16407954 agttactccctttgattttccaagtttctctctcttccaactctcttcaaaatctgcacaagaatac-ttaaatactagccctccactgataaaatcgtg 16407856  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  16407855 tcacgatt 16407848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 11916599 - 11916541
Alignment:
Q  205 caagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||| | |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  11916599 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 11916541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 35388155 - 35388201
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacga 283  Q
    |||||||||| |||||||||||||||| | ||||||||||| |||||    
T  35388155 atcgtgtcacaatttggcaccctgcaaaccagctcacggcatcacga 35388201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 13342970 - 13342933
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  13342970 aagttgcttcctttgatttcccaagtttctctctcttc 13342933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 22536545 - 22536629
Alignment:
Q  35 ctccctttgatttcccaagtgtctctctct--tccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctg 117  Q
    |||||||||||||||||||| |||||||||  |||||| | ||  |||||  |||||||||||||||  |||||| |||||||||||    
T  22536545 ctccctttgatttcccaagtctctctctctcttccaactctctcttcaaatctgcacaagaacactt--tatactagccttcctctg 22536629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 30182498 - 30182461
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  30182498 aagttgcttcctttgatttcccaagtttctctctcttc 30182461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 36074303 - 36074340
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  36074303 aagttgcttcctttgatttcccaagtttctctctcttc 36074340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 213066 - 213018
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | | ||||||||    
T  213066 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaa 213018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 42426685 - 42426729
Alignment:
Q  219 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||    
T  42426685 gtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 42426729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 85 - 303
Target Start/End: Original strand, 8477729 - 8477946
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcct 184  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| |||||||||||||||||||||    
T  8477729 cacaagaacacttaa-atactagccttcctctgaagcaatcgtgtcacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtcct 8477827  T
Q  185 tgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaa 284  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| ||||    
T  8477828 tatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaa 8477927  T
Q  285 atcgcgtcacgatgccaaa 303  Q
    |||| ||||||||||||||    
T  8477928 atcgtgtcacgatgccaaa 8477946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 30 - 303
Target Start/End: Complemental strand, 54635040 - 54634766
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgt 127  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||  |||||  |||||||||||||||||||  || |||||||||||  ||||||||    
T  54635040 agttgctccctttgatttcccaagtctctctctcttccaactccctcttcaaatctgcacaagaacactttata--ctagccttcctctgttgcaatcgt 54634943  T
Q  128 gtcacgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||||||  |||| ||||| |||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  54634942 gtcacgattttcccaatcgtgtcatgatttgcgtaccacccaagaaaagaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacg 54634843  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||||  |||||| |||||||| |||||||||||| |||||||||||||| |||||||| ||||| ||||||||    
T  54634842 atttcccacaatcgtgccacgattttgcaccctgcaacttagctcacggcaccccgaaatcgtgtcacaatgccaaa 54634766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 30 - 303
Target Start/End: Complemental strand, 6716415 - 6716141
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccc--cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgt 127  Q
    |||| |||||||||||||||||||| |||||||||||||||||   |||||||  |||||||||||||||||||  || | |||||||||  | ||||||    
T  6716415 agttactccctttgatttcccaagtctctctctcttccaaccctttcttcaaatctgcacaagaacactttata--ctagtcttcctctgttgaaatcgt 6716318  T
Q  128 gtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  6716317 gtcacgattttccaaatcgtgtcacgatccgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacg 6716218  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  6716217 atttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaa 6716141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 6718599 - 6718331
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccc--cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgt 127  Q
    |||| |||||||||||||||||||| |||||||||||||||||   |||||||  |||||||||||||||||||  || | |||||||||  | ||||||    
T  6718599 agttactccctttgatttcccaagtctctctctcttccaaccctttcttcaaatctgcacaagaacactttata--ctagtcttcctctgttgaaatcgt 6718502  T
Q  128 gtcacgatttt-caaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||||| |||||| |||||||||  ||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  6718501 gtcacgatttttcaaatcgtgtcacgatccgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacg 6718402  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  6718401 atttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 45282898 - 45282628
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctct--tccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatc 125  Q
    ||||||||||||||||| ||||||| |||||||||  |||||| | ||  |||||  |||||||||||||||||||  || |||||||||||  | ||||    
T  45282898 agttgctccctttgattccccaagtctctctctctcttccaactctctcttcaaatctgcacaagaacactttata--ctagccttcctctgttgaaatc 45282801  T
Q  126 gtgtcacgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtca 224  Q
    ||||||||||||||  |||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  45282800 gtgtcacgattttcccaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtca 45282701  T
Q  225 cgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    |||||| || | |||||||||||| || ||||||||||||||||||||||||||| |||||||| ||||||||    
T  45282700 cgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 83 - 303
Target Start/End: Complemental strand, 40372532 - 40372312
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  |||||||| | |||||||||||| |||||||||||||||| || ||| || |||||||||||| |   || ||||||||||||||    
T  40372532 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtc 40372433  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||| ||    
T  40372432 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcg 40372333  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  40372332 aaatcgtgtcacgatgccaaa 40372312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 83 - 303
Target Start/End: Original strand, 7167606 - 7167826
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  |||||||| | |||||||||||| ||||||| || |||||||||||| |||||||||||||||   |||||||||||||||||||    
T  7167606 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccatgattttcaaatcgtgtcacgatttgcgtctgacccaaggtatgaccagtc 7167705  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||||  |    
T  7167706 cttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttg 7167805  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||| | ||||||||||||||    
T  7167806 aaattgtgtcacgatgccaaa 7167826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 297
Target Start/End: Complemental strand, 8738809 - 8738585
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||||| | ||||||||||||  |||||||| | |||||||||||||||||||| |||||||| || ||||||||||||||||||| |   |||||||    
T  8738809 ccttcaaaaaagcacaagaacacaatatatactagacttcctctgaagcaatcgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggt 8738710  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||  ||||||| ||||||||    
T  8738709 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctca 8738610  T
Q  273 cggcaccacgaaatcgcgtcacgat 297  Q
    |||||||  ||||||  ||||||||    
T  8738609 cggcaccttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 297
Target Start/End: Complemental strand, 9091047 - 9090823
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||||| | ||||||||||||  |||||||| | |||||||||||||||||||| |||||||| || ||||||||||||||||||| |   |||||||    
T  9091047 ccttcaaaaaagcacaagaacacaatatatactagacttcctctgaagcaatcgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggt 9090948  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||  ||||||| ||||||||    
T  9090947 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctca 9090848  T
Q  273 cggcaccacgaaatcgcgtcacgat 297  Q
    |||||||  ||||||  ||||||||    
T  9090847 cggcaccttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 83 - 303
Target Start/End: Complemental strand, 27352357 - 27352137
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  |||||| | |||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |  ||||||||||||||||||    
T  27352357 tgcacaagaacacaatatatattagccttcctctgaagcaatcgtgccacgatttccaaatcgtgtcacgatttgcgtccgtcccaaggtatgaccagtc 27352258  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| |||  |||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||    |||||| | |||||||||||||  |    
T  27352257 cttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcaccttg 27352158  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  27352157 aaatcgtgtcacgatgccaaa 27352137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 2671284 - 2671121
Alignment:
Q  140 aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatc 239  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2671284 aaatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatc 2671185  T
Q  240 gtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| |||||||||||| ||||||| |||||||||||||||  ||||||  ||||||||||||||    
T  2671184 gtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaa 2671121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 37 - 301
Target Start/End: Complemental strand, 25637337 - 25637071
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    |||||||||||||||||| |||||||||||||||| |||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  25637337 ccctttgatttcccaagtctctctctcttccaacctcctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 25637239  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttccc 233  Q
    |||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  25637238 ttttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc 25637139  T
Q  234 aagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgcca 301  Q
    |  |||||| |||||||||   |||||||| |||||||| | ||||| |||||||| ||||||||||||    
T  25637138 acaatcgtgccacgatttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacgatgcca 25637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 23198198 - 23198476
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||||||||||||||||| |||||| ||||||||||||||| | |||||||   ||||||||||||||| | ||||| | ||||| ||||   |||||||    
T  23198198 agttgctccctttgattttccaagtttctctctcttccaactctcttcaaaatctgcacaagaacacttaa-atactagtcttccactgataaaatcgtg 23198296  T
Q  129 tcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| |||||| |||||||||| |  |||||  | ||||||| ||||||||||| ||  ||| |||||||||||||||||   ||||||||||||    
T  23198297 tcacgatttccaaatcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacg 23198396  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||| | | | ||||||||||||||||||||||||||| | ||||||||||| ||| |||||| ||||||||| |||||||    
T  23198397 attcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattc 23198476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 303
Target Start/End: Complemental strand, 28503606 - 28503375
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaa--tcatgtcacgatttgcgtaccacccaag 170  Q
    |||||||| | ||||||||||||  |||||||| | |||||||||||||||||||| |||||||| | ||  || |||||||||||||||   |||||||    
T  28503606 ccttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcacgatttgcgtctgacccaag 28503507  T
Q  171 gtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagct 270  Q
    || |||| ||||||| ||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||  || |||| ||||||    
T  28503506 gt-tgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactagct 28503408  T
Q  271 cacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||| ||  ||||||| ||||||||||||||    
T  28503407 cacggccccttgaaatcgtgtcacgatgccaaa 28503375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 313
Target Start/End: Original strand, 1306366 - 1306557
Alignment:
Q  124 tcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtg 221  Q
    |||||||||||||| ||| || |||||||||| |  |||||  | ||||||| |||| |||||| ||  ||| ||||||||||||||||| | |||||||    
T  1306366 tcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtg 1306465  T
Q  222 tcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattcatctcac 313  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  1306466 tcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcac 1306557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 23200397 - 23200675
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||||   ||||||| ||||||| | ||||  | ||||| ||||   |||||||    
T  23200397 agttgctccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcacaaaaacacttaa-ataccagtcttccactgataaaatcgtg 23200495  T
Q  129 tcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| |||||| |||||||||| |  ||||   | ||||||| ||||||||||| ||  ||| |||||||||||||||||   ||||||||||||    
T  23200496 tcacgatttccaaatcgtgtcacgattggtacgtaagtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacg 23200595  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||| | | | ||||||||||||||||||||||||||| | ||||||| ||| ||| |||||| |||||||||||||||||    
T  23200596 attcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattc 23200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10058350 - 10058083
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  10058350 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 10058254  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| |||||||||||||||||  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  10058253 tttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 10058154  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10058153 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10058083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10060572 - 10060305
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  10060572 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 10060476  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| |||||||||||||||||  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  10060475 tttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 10060376  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10060375 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10060305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10062794 - 10062527
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  10062794 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 10062698  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| |||||||||||||||||  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  10062697 tttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 10062598  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10062597 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10062527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10065016 - 10064749
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  10065016 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 10064920  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| |||||||||||||||||  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  10064919 tttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 10064820  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10064819 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 303
Target Start/End: Complemental strand, 28501439 - 28501208
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaa--tcatgtcacgatttgcgtaccacccaag 170  Q
    |||||||| | ||||||| ||||  |||||||| | |||||||||||||||||||| |||||||| | ||  || ||||| |||||||||   |||||||    
T  28501439 ccttcaaaaaagcacaagtacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaag 28501340  T
Q  171 gtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagct 270  Q
    || |||| ||||||| ||| ||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||   ||||||| ||||||    
T  28501339 gt-tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagct 28501241  T
Q  271 cacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||| ||  ||||||| ||||||||||||||    
T  28501240 cacggccccttgaaatcgtgtcacgatgccaaa 28501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10056128 - 10055861
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  10056128 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 10056032  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  10056031 tttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 10055932  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10055931 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10055861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 10067238 - 10066971
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  10067238 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 10067142  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  10067141 tttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 10067042  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10067041 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10066971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 3617358 - 3617090
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc----cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||||  ||||||||||||||| |    |||||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||    
T  3617358 ccctttgatttcccaagt--ctctctcttccaacctctactcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcac 3617262  T
Q  133 gattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    |||||||  |||| ||||||||||||||| |  ||||||| | |||||| | || |||||||||||||||||||||||||||| |||||||||||||||     
T  3617261 gattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 3617162  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  3617161 cccaaatcgtgacacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaa 3617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 36 - 303
Target Start/End: Original strand, 4598781 - 4599051
Alignment:
Q  36 tccctttgatttcccaagtgtctctctcttccaaccccct----tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtca 131  Q
    |||||||||||||||||||  |||||||||||||| | ||    |||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||    
T  4598781 tccctttgatttcccaagt--ctctctcttccaactctctcctttcaaatctgcacaagaacacttaag-tactagtcttcctctgtttcaatcgtgtca 4598877  T
Q  132 cgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 230  Q
    ||||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||    
T  4598878 cgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 4598977  T
Q  231 ccca-agatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||| | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| ||| |||| |||||    
T  4598978 cccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcgcgatcccaaa 4599051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 36 - 303
Target Start/End: Original strand, 4601002 - 4601272
Alignment:
Q  36 tccctttgatttcccaagtgtctctctcttccaaccc----ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtca 131  Q
    |||||||||||||||||||  |||||||||||||| |    | ||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||    
T  4601002 tccctttgatttcccaagt--ctctctcttccaactctttcctttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtca 4601098  T
Q  132 cgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 230  Q
    ||||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||    
T  4601099 cgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 4601198  T
Q  231 ccca-agatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||| | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| ||| |||| |||||    
T  4601199 cccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcgcgatcccaaa 4601272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 297
Target Start/End: Original strand, 32143707 - 32143884
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||| |||||| ||||||||||  | |||||  | ||||||| |||| |||||| ||  | | ||||||||||||||||| | |||||    
T  32143707 aatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcttgaaaacttaacgagcaagtttgaaaatcg 32143806  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    |||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||    
T  32143807 tgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 303
Target Start/End: Complemental strand, 10211305 - 10211034
Alignment:
Q  36 tccctttgatttcccaagtgtctctctcttccaacccc-----cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtc 130  Q
    |||||||||||||||||||  ||||||||||||||| |     |||||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||    
T  10211305 tccctttgatttcccaagt--ctctctcttccaacctcttttacttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtc 10211209  T
Q  131 acgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-t 228  Q
    |||||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||||||| || |    
T  10211208 acgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgatt 10211109  T
Q  229 ttcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||| |||||| |||||||||   |||||||| |||| ||||||||| | | ||||||||||||||| |||||    
T  10211108 ttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggcatc-ctaaatcgcgtcacgataccaaa 10211034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 18656843 - 18656973
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagc-tca 272  Q
    |||||||||||| |||  |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||| || || |||    
T  18656843 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 18656942  T
Q  273 cggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||||||||||||| ||||||||||||||    
T  18656943 cggcaccacgaaatcgtgtcacgatgccaaa 18656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 22172899 - 22172718
Alignment:
Q  122 aatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgt 220  Q
    ||||||| |||||||| | ||||| |||||||||||||     | ||||||| |||||||||||| |||  ||| |||||||||||||||||  ||||||    
T  22172899 aatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggaaccaaggt-tgaccagtccttatcagagatccttaacgagcaagtttctgaatcgt 22172801  T
Q  221 gtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||||||||||||||||||| |||||||||||  ||||||| || |||||||||||| |||||||| ||||||||||||||    
T  22172800 gtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaa 22172718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 306
Target Start/End: Complemental strand, 800973 - 800739
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaag 170  Q
    |||||||| |||||||||||||||| | ||| | ||| ||  ||||   |||||||||||||||| ||   | ||||||||||  ||||| |  ||||||    
T  800973 ccttcaaatatgcacaagaacacttaa-atattagccctctactgataaaatcgtgtcacgatttccaggccgtgtcacgattggtgcgttcgtcccaag 800875  T
Q  171 gtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagct 270  Q
      | ||||| ||||| ||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||||||||||||||||||| |||| | ||||    
T  800874 aaacgaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagct 800775  T
Q  271 cacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||| |||||||||| |||||||||||||||||    
T  800774 cacggcatcacgaaatcgtgtcacgatgccaaattc 800739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 26928245 - 26928134
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||||||||||||| | ||||||||||||||| | |||||| |||||||||||||||||||||||| | |||||||||||  || |||||| |||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcac 26928146  T
Q  295 gatgccaaattc 306  Q
    ||||||||||||    
T  26928145 gatgccaaattc 26928134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 33386302 - 33386191
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||| | ||| ||||||||||||||||||||||||||| | ||||||||||| ||| |||||| |||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  295 gatgccaaattc 306  Q
    ||||||||||||    
T  33386202 gatgccaaattc 33386191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 7782401 - 7782603
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaac-ccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| |||||||||||||||   ||||||||  ||||||||||||| ||| ||||| ||| ||| ||||   |||||||    
T  7782401 agttactccctttgatttcccaagtttctctctcttccaactgtccttcaaatctgcacaagaacac-ttaaatactagccctccactgataaaatcgtg 7782499  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| || ||| ||||||||||  | ||| |  ||||||| | ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  7782500 tcacgatttccagatcgtgtcacgattggtacgttcgtcccaaggcacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 7782599  T
Q  227 attt 230  Q
    ||||    
T  7782600 attt 7782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 10208997 - 10208834
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcccaagatc 239  Q
    |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||| ||||||||||||||||   |||||||||||| |||||||| |||    
T  10208997 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatc 10208898  T
Q  240 gtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| |||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  10208897 gtgccacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 10208834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 27453416 - 27453527
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||| | ||  ||| ||||||||||||||||||| ||| | ||||||||||| ||| |||||| |||||    
T  27453416 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcac 27453515  T
Q  295 gatgccaaattc 306  Q
    ||||||||||||    
T  27453516 gatgccaaattc 27453527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 27986103 - 27986001
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||| | ||  ||||||||||||||||||||||||||| | ||||||||||| ||| |||||| |||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 27986004  T
Q  295 gat 297  Q
    |||    
T  27986003 gat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 32475885 - 32475963
Alignment:
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    ||||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32475885 atgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 32475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 32480743 - 32480821
Alignment:
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    ||||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32480743 atgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 32480821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 37726134 - 37726245
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| | ||||||| | ||||||||||||||| | ||| |||||||||||||||| |||||||||| | ||||||||||| ||| |||||| |||||    
T  37726134 acttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 37726233  T
Q  295 gatgccaaattc 306  Q
    |||  |||||||    
T  37726234 gatatcaaattc 37726245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 2672604 - 2672527
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  2672604 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattt 2672527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 7782589 - 7782658
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||| | ||||||| ||| |||||||||| |||||||||||||||||    
T  7782589 atcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattc 7782658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 8512642 - 8512719
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  8512642 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8512719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 8517522 - 8517599
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  8517522 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 24968414 - 24968596
Alignment:
Q  70 cccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccaccc 167  Q
    |||| |||||| | |||||||||||||||| ||||| | ||| | |||||| ||||||| |||||||| |  | ||| || ||||||||||      |||    
T  24968414 cccctttcaaataagcacaagaacactttaaatactagtcttgccctgaagaaatcgtgccacgatttccctagatcgtggcacgatttgcaacggtccc 24968513  T
Q  168 aaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
     |||| |||||||||||| |||  || ||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  24968514 caggt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24968596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 2676760 - 2676683
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  ||| |||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  2676760 tgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattt 2676683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 37408200 - 37408095
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| | ||||||| | |||||||||||||||| |  | |||||| ||||||||| |||||||||| | |||||||||||| || |||||| |||||    
T  37408200 acttaaccaacaagtttgaaaatcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcac 37408102  T
Q  295 gatgcca 301  Q
    |||||||    
T  37408101 gatgcca 37408095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 27974653 - 27974477
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||| ||| |||| |||||||||||||||||  | ||||| ||||||||||  ||||  |||| ||| | | | ||||| ||||||||| | ||||     
T  27974653 aatcgtgccacaatttccaaatcatgtcacgattgatacgtacgacccaaggtacaaccaa-ccttatcatgaaaatttaaccagcaagtttgaaaatca 27974555  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    ||||| |||||  ||  |||||| ||||||||| |||||||||| | |||||||||||  || |||||| ||||||||    
T  27974554 tgtcaagatttaacacaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 27974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 16264734 - 16264876
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||| ||| |||||| || |||||||  |||||||||||||||||| |||||  |||| ||  | | || || | ||| ||||| | |||||    
T  16264734 aatcgtgtcacgctttccaaatcgtggcacgattggtgcgtaccacccaaggtacgacca-accttatcctgaaaacgtacccagctagtttgaaaatcg 16264832  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||| |||||||| |||||| |||||||  |||||||||||    
T  16264833 tgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 16264876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 39032256 - 39032117
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||||||||||||||||||| || |||||||  ||||||| |||||||||| |||||  | || ||  | | || || | ||||||||| | |||||    
T  39032256 aatcgtgtcacgattttcaaatcgtggcacgattggtgcgtacgacccaaggtacgacca-actttatcctgaaaacgtacccagcaagtttgaaaatcg 39032158  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctg 260  Q
    ||||||  |||||||| |||||| |||||||  ||||||||    
T  39032157 tgtcacattttcccaaaatcgtgacacgattgagcaccctg 39032117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 29812785 - 29812737
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  29812785 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 29812737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 40735161 - 40735101
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  40735161 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 40735101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 3393328 - 3393293
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3393328 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 3393293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 5258591 - 5258626
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  5258591 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 5258626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 22172967 - 22172904
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattt 137  Q
    ||||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| ||||||||    
T  22172967 cttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgattt 22172904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 40734228 - 40734170
Alignment:
Q  205 caagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||| | |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  40734228 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 40734170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 9636386 - 9636427
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttccaac 70  Q
    ||||| || ||||||||||||||||| |||||||||||||||    
T  9636386 aagtttcttcctttgatttcccaagtttctctctcttccaac 9636427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 6096264 - 6096312
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||| ||| | ||||||||||    
T  6096264 aatcgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaa 6096312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 8370096 - 8370048
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  8370096 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 8370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 27027174 - 27027234
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | |||||||||||| |||||||| |||||| |||||||  |||| ||||||    
T  27027174 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaa 27027234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 36029561 - 36029621
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | |||||||||||| ||| |||| |||||| |||||||  |||||||||||    
T  36029561 agcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattaagcaccctgcaa 36029621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 44331893 - 44331941
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| ||| |||| |||||||||||||| | ||||||||||    
T  44331893 aatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaa 44331941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 46173238 - 46173190
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||| | |||||||| |||||||||||||| | ||||||||||    
T  46173238 aatcgtgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaa 46173190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 49200115 - 49200163
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| || ||||| |||||||||||||| | ||||||||||    
T  49200115 aatcgtgtcacgtttccccaacatcgtgtcacgattggacaccctgcaa 49200163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 9296137 - 9295918
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcc 183  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||    
T  9296137 gcacaagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattttcagatcgtgtcacgatttgcgtccgacccaaggtatgaccagtcc 9296038  T
Q  184 ttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacga 283  Q
    || |||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||  ||    
T  9296037 ttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttga 9295938  T
Q  284 aatcgcgtcacgatgccaaa 303  Q
    ||||| ||||||||||||||    
T  9295937 aatcgtgtcacgatgccaaa 9295918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 83 - 303
Target Start/End: Original strand, 14291849 - 14292069
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| || ||| ||||||||||||||||| |||||||||||||||||||    
T  14291849 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtc 14291948  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| |||  | |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||| ||    
T  14291949 cttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcg 14292048  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    | |||| ||||||||||||||    
T  14292049 agatcgtgtcacgatgccaaa 14292069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 4484591 - 4484869
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccccctt-caaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||| ||||  ||||||||||||||| | ||||| ||||||| ||||   |||||||    
T  4484591 agttactccctttgatttcccaagtttctctctcttccaactctctttcaaatctgcacaagaacacttaa-atactagccttccactgataaaatcgtg 4484689  T
Q  129 tcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| || ||| |||||||||| |  |||||  ||||||||| ||||||||||| |||  || |||||||||||||||||   ||||||||||||    
T  4484690 tcacgatttccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacg 4484789  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||| |  |||||||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||    
T  4484790 attccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattc 4484869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 83 - 303
Target Start/End: Complemental strand, 11098663 - 11098443
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  ||||| || | |||||||||||| ||||||| |||||||| || ||| ||||||||||||||||| ||||||||| |||||||||    
T  11098663 tgcacaagaacacaatatatgctagtcttcctctgaagaaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtttgaccagtc 11098564  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||||  |    
T  11098563 cttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttg 11098464  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||| ||||||||    
T  11098463 aaatcgtgtcactatgccaaa 11098443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 30 - 313
Target Start/End: Complemental strand, 30833253 - 30832968
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||| ||||||||| | | ||||||||  ||||||||||||||| | ||||| | ||||| ||||   |||||||    
T  30833253 agttactccctttgatttcccaagtttctttctcttccagctcaccttcaaatctgcacaagaacacttaa-atactagtcttccactgataaaatcgtg 30833155  T
Q  129 tcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||| || |||||||||| |  |||||  | ||||||| |||| |||||| ||  ||| ||||||||||||||||| | ||||||||||||    
T  30833154 tcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacg 30833055  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattcatctcac 313  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||| ||||    
T  30833054 atttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcac 30832968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 32289480 - 32289202
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||| | |||||||||   ||||||||||||||| | ||||| ||| ||| ||||   |||||||    
T  32289480 agttactccctttgatttcccaagtttctctctcttccatctcccttcaaaatctgcacaagaacacttaa-atactagccctccactgataaaatcgtg 32289382  T
Q  129 tcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||  || |||||||||| |  |||||  ||||||||| ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  32289381 tcacgatttccaggtcgtgtcacgattggagcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacg 32289282  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||| | ||||||||||||| ||||||||||||||||| | ||||||||||| ||| |||||| |||||||||||||||||    
T  32289281 attcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattc 32289202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 108 - 306
Target Start/End: Original strand, 25410012 - 25410212
Alignment:
Q  108 ccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagc 205  Q
    |||||||||||   ||| |||||||||||| ||| || |||||||||| |  |||||  | ||||||| ||||| ||||| |||||||||||||||||||    
T  25410012 ccttcctctgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccattccttatcaaggatacttaacgagc 25410111  T
Q  206 aagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaatt 305  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||| |||||| ||||||||||||||||    
T  25410112 aagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaatt 25410211  T
Q  306 c 306  Q
    |    
T  25410212 c 25410212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 6266606 - 6266328
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| |||||||||||| || | ||||||||  ||||||||||||||| | ||||| ||| ||| ||||   |||||||    
T  6266606 agttgctccctttgatttcccaagtctctctctcttcccactctccttcaaatctgcacaagaacacttaa-atactagccctccactgataaaatcgtg 6266508  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||  || ||||||||||  ||||| |  ||||||  | ||||| ||||| ||| ||| |||||||||| ||||||   ||||||||||||    
T  6266507 tcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaacgaccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacg 6266408  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||||||||| |||||||| | ||||||||| |||||||    
T  6266407 atttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaattgtgtcacgatgtcaaattc 6266328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 83 - 306
Target Start/End: Original strand, 3492099 - 3492323
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| | ||||| ||||   ||| |||||||||||| ||| || |||||||||| |  |||||  | ||||||| |||| |    
T  3492099 tgcacaagaacacttaa-atactagtcttccactgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctg 3492197  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||||| ||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  3492198 tccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 3492297  T
Q  281 cgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||| |||||||||||||||||    
T  3492298 caaaatcgtgtcacgatgccaaattc 3492323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 303
Target Start/End: Original strand, 12647644 - 12647911
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccc---ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  |||||||||||||| |   ||||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  12647644 ccctttgatttcccaagt--ctctctcttccaactctctccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 12647740  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||    |||||||||||||||||    
T  12647741 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcc 12647840  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||  |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  12647841 cacaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaa 12647911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 306
Target Start/End: Original strand, 40739217 - 40739403
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||| |||||| ||||||||||  | |||||  | ||||||| |||| |||||| ||  | | ||||||||||||||||| | ||| |    
T  40739217 aatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaattg 40739316  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||| ||| | ||||||||||||||||||||||||||||||| | |||||||||||  || |||||| |||||||||||||||||    
T  40739317 tgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattc 40739403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 39811763 - 39811533
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| |  | ||| ||||||||| |||      |||||||    
T  39811763 cttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaagg 39811664  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
     | ||| ||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| || |||     
T  39811663 ca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgctt 39811565  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||   |  ||||||| ||||||||||||||    
T  39811564 acggtcacttgaaatcgtgtcacgatgccaaa 39811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 28258889 - 28258713
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||| |||| ||| |||||| || |||||||  ||||||| |||||||||| |||||  |||| ||  | | ||||||| ||||||||| | |||||    
T  28258889 aatcgtgccacgttttccaaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcg 28258791  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    |||||||||||| ||| || ||| ||||||||| |||||||||| | |||||||||||  || |||||| ||||||||    
T  28258790 tgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 19344824 - 19344901
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| || |||||    
T  19344824 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattt 19344901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 19349682 - 19349759
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| | ||||||||  |||||||||||||||||||||||||||| ||||||||    
T  19349682 tgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 19349759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 34389236 - 34389375
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||| ||| |||||| || |||||||  ||||||| |||||||||| |||||  |||| ||  | | || || | ||||||||| | |||||    
T  34389236 aatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcg 34389334  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctg 260  Q
    ||||||| |||||||| |||||||||||||| | |||||||    
T  34389335 tgtcacgttttcccaaaatcgtgtcacgattggacaccctg 34389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 2837290 - 2837338
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  2837290 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 2837338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 33528253 - 33528193
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  33528253 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 33528193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 4503391 - 4503428
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  4503391 aagttgcttcctttgatttcccaagtttctctctcttc 4503428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 29867601 - 29867556
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 260  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||    
T  29867601 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 29867556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 36205922 - 36205959
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  36205922 aagttgcttcctttgatttcccaagtttctctctcttc 36205959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 45099664 - 45099627
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  45099664 aagttgcttcctttgatttcccaagtttctctctcttc 45099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 32247188 - 32247244
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 230  Q
    ||||||||| || |||  |||||||||||||||||||||  ||||||| ||||||||    
T  32247188 tgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 7e-80; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 83 - 313
Target Start/End: Complemental strand, 5674506 - 5674276
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    ||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||| || ||| |||||||||||||||||  ||||||||||||||||||    
T  5674506 tgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtc 5674407  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||     
T  5674406 cttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcaca 5674307  T
Q  283 aaatcgcgtcacgatgccaaattcatctcac 313  Q
    |||||  ||||||||||||||||||| ||||    
T  5674306 aaatcatgtcacgatgccaaattcatgtcac 5674276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 37 - 303
Target Start/End: Original strand, 16578777 - 16579045
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||| ||||||| |||||| |||||||| ||   |||||||  |||||||||||| ||||||  ||  ||||||||||  | ||||||||||||    
T  16578777 ccctttgattccccaagtctctctcacttccaactcctctcttcaaatctgcacaagaacaatttata--ctacccttcctctgttgaaatcgtgtcacg 16578874  T
Q  134 attttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    |||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  16578875 atttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 16578974  T
Q  233 caagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    | | |||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  16578975 ccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaa 16579045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 16616603 - 16616335
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||| ||||||| |||||| |||||||| ||   |||||||  |||||||||||| ||||||  ||  ||||||||||  | ||||||||||||    
T  16616603 ccctttgattccccaagtctctctcacttccaactcctctcttcaaatctgcacaagaacaatttata--ctacccttcctctgttgaaatcgtgtcacg 16616506  T
Q  134 attttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    |||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  16616505 atttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 16616406  T
Q  233 caagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    | | |||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  16616405 ccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaa 16616335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 412017 - 411739
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgt 129  Q
    |||| |||||||||||||| ||||| ||||||||||||||| |||||||||  ||||||||||||||| | ||||  ||||||| ||||   ||||||||    
T  412017 agttactccctttgatttctcaagtttctctctcttccaactcccttcaaatctgcacaagaacacttaa-atacatgccttccactgataaaatcgtgt 411919  T
Q  130 cacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagttt-cacaatcgtgtcacg 226  Q
    |||||||| |  ||  ||||||||||  ||| | |  ||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||    
T  411918 cacgatttcctgattgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacg 411819  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||| |||||||||||    
T  411818 atttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattc 411739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 37 - 313
Target Start/End: Complemental strand, 16554778 - 16554500
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||| ||||||| |||||| |||||||| |    |||||||  |||||||||||| ||||||  || |||||||||||  | ||||||||||||    
T  16554778 ccctttgattccccaagtctctctcacttccaactcttctcttcaaatctgcacaagaacaatttata--ctagccttcctctgttgaaatcgtgtcacg 16554681  T
Q  134 attttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    |||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  16554680 atttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 16554581  T
Q  233 caagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattcatctcac 313  Q
    | | |||||| ||| |||| |||||||| |||||||||||||||||| |||||||| |||||||| ||||| |||| ||||    
T  16554580 ccaaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcac 16554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 37 - 313
Target Start/End: Complemental strand, 16631334 - 16631056
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||| ||||||| |||||| |||||||| |    |||||||  |||||||||||| ||||||  || |||||||||||  | ||||||||||||    
T  16631334 ccctttgattccccaagtctctctcacttccaactcttctcttcaaatctgcacaagaacaatttata--ctagccttcctctgttgaaatcgtgtcacg 16631237  T
Q  134 attttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    |||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  16631236 atttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 16631137  T
Q  233 caagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattcatctcac 313  Q
    | | |||||| ||| |||| |||||||| |||||||||||||||||| |||||||| |||||||| ||||| |||| ||||    
T  16631136 ccaaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcac 16631056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 37 - 297
Target Start/End: Complemental strand, 16653021 - 16652759
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||  |||||| |||||| |||||||| |    |||||||  |||||||||||| ||||||  || |||||||||||  | ||||||||||||    
T  16653021 ccctttgattctccaagtctctctcacttccaactcttctcttcaaatctgcacaagaacaatttata--ctagccttcctctgttgaaatcgtgtcacg 16652924  T
Q  134 attttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    |||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |    
T  16652923 atttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttc 16652824  T
Q  233 caagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    | | |||||  ||||| || ||||||| ||||||||||||||||||| |||||||| ||||||||    
T  16652823 ccaaatcgttccacgactttgcaccctacaacctagctcacggcaccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 167 - 308
Target Start/End: Original strand, 2171911 - 2172052
Alignment:
Q  167 caaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacct 266  Q
    ||||||| |||| |||||| ||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  2171911 caaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 2172010  T
Q  267 agctcacggcaccacgaaatcgcgtcacgatgccaaattcat 308  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  2172011 agctcacggcatcacgaaatcgtgtcacgatgccaaattcat 2172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 3073013 - 3073289
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttc-aaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| |||||||  |||||| | |||| |||  ||||||||||||||| | ||||| ||| ||| ||||   |||||||    
T  3073013 agtttctccctttgatttcccaagtttctctct--tccaactctcttccaaatctgcacaagaacacttaa-atactagccctccactgataaaatcgtg 3073109  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| || ||| ||| ||||||  ||| | |  ||||||||||||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  3073110 tcacgatttccagatcgtgtaacgattagtgcatccatcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 3073209  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||| |  |||||||||||||||||||||||| |  | ||||||||||| |||||||||| |||||||||||||||||    
T  3073210 atttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 3073289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 301
Target Start/End: Complemental strand, 27647686 - 27647526
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcg 240  Q
    |||| ||||||||| |||||||||||||||  | ||||||||  | |||||||||||||||||||||||||||| |||||||||||||||| ||  ||||    
T  27647686 aatcgtgtcacgatctgcgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcg 27647587  T
Q  241 tgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgcca 301  Q
    || |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  27647586 tgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgcca 27647526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 122 - 306
Target Start/End: Original strand, 22709405 - 22709591
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatttgc--gtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||| ||| || ||||||||||||   ||||  | ||||||| ||||||||||| ||| ||| ||||||||||||||||| | |||||    
T  22709405 aatcgtgtcacgatttccaagtcgtgtcacgatttgtatgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaatcg 22709504  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| ||| |||||| |||||| ||||||||||    
T  22709505 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaaattc 22709591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 34166989 - 34166722
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  34166989 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 34166893  T
Q  135 ttttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| |  |||| |||||||||||||||||  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  34166892 tttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 34166793  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| ||||||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  34166792 caaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 34166722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 297
Target Start/End: Original strand, 5266454 - 5266610
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcg 240  Q
    |||| ||||||||||||||| |    ||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  5266454 aatcgtgtcacgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcg 5266553  T
Q  241 tgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    || |||||||||||  ||||||| ||||||||||||||| |||||||| ||||||||    
T  5266554 tgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 11857292 - 11857511
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| | ||||| |||||||||||||     ||||||||| |||| ||||    
T  11857292 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggacccaaggt-tgacaagtc 11857390  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| |||  | |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||  |  |    
T  11857391 cttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttg 11857490  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  11857491 aaatcgtgtcacgatgccaaa 11857511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 37 - 297
Target Start/End: Complemental strand, 34164767 - 34164506
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacga 134  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||||    
T  34164767 ccctttgatttcccaagt--ctctctctttcaaccctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacga 34164671  T
Q  135 ttt-tcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcc 232  Q
    ||| || |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||    
T  34164670 tttgtccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcc 34164571  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    ||| |||||| |||||||||   |||||||| |||| ||||||||| | |||||||||||||||||    
T  34164570 caaaatcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgat 34164506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 37 - 252
Target Start/End: Complemental strand, 25421214 - 25420999
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  ||||||||||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  25421214 ccctttgatttcccaagt--ctctctcttccaacctctttcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 25421118  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||||||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  25421117 attttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 25421018  T
Q  233 caagatcgtgtcacgatttg 252  Q
    | | ||| ||||||||||||    
T  25421017 cca-atcatgtcacgatttg 25420999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 37 - 303
Target Start/End: Original strand, 33342364 - 33342632
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaa---cccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  |||||||||||||   | | |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  33342364 ccctttgatttcccaagt--ctctctcttccaaattctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 33342460  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    |||| |  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  33342461 atttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcc 33342560  T
Q  233 ca-agatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || | |||||| |||||||||   |||||||| |||||||||||||| | |||||||||||| |||| |||||    
T  33342561 cagaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgcgtcgcgatcccaaa 33342632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 295
Target Start/End: Complemental strand, 25421034 - 25420861
Alignment:
Q  123 atcgtgtcacgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtg 221  Q
    |||||||||||||||||  |||||||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  25421034 atcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 25420935  T
Q  222 tcacgatttcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacg 295  Q
    ||||||||| || | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| ||||||    
T  25420934 tcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacg 25420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 37 - 300
Target Start/End: Complemental strand, 6027157 - 6026893
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  ||||||||||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  6027157 ccctttgatttcccaagt--ctctctcttccaacctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 6027061  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | |||| |||||| ||||||||||||||||||||||||||   ||||||||||||||| |    
T  6027060 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttc 6026961  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgcc 300  Q
    | | |||||| |||||||||   |||||||| |||||||| | ||||| |||||||| ||||| |||||    
T  6026960 ccaaatcgtgccacgatttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacaatgcc 6026893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 22010475 - 22010245
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | || ||||||||| ||||||| |||||||| |  | ||| |||||||||||||     ||||||||    
T  22010475 cttcaaaaaagcacaagaacacaatatatactagtctccctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaagg 22010376  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    || ||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||| ||     
T  22010375 ta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactaactt 22010277  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||  |  ||||||| ||||||||||||||    
T  22010276 acggccacttgaaatcgtgtcacgatgccaaa 22010245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 30125185 - 30125074
Alignment:
Q  192 gatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgt 291  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||  ||||||| ||||||||||||||| |||||||| ||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  292 cacgatgccaaa 303  Q
    ||||||||||||    
T  30125085 cacgatgccaaa 30125074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 13151068 - 13150905
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcccaagatc 239  Q
    |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||||| |||    
T  13151068 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatc 13150969  T
Q  240 gtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  13150968 gtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 13150905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 14742202 - 14741982
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||| |||     ||||||||| |||| |||    
T  14742202 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatctgcaacggacccaaggt-tgacaagt 14742104  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccac 281  Q
    |||| |||  |||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||||||  ||||||| |||||||||| |  |      
T  14742103 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacgaccactt 14742004  T
Q  282 gaaatcgcgtcacgatgccaaa 303  Q
    ||||||| ||||||||||||||    
T  14742003 gaaatcgtgtcacgatgccaaa 14741982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 84 - 297
Target Start/End: Complemental strand, 14737342 - 14737128
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||| |||     ||||||||| |||| |||    
T  14737342 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggt-tgacaagt 14737244  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccac 281  Q
    |||| |||  |||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||||||  ||||||| ||||||||||||  |      
T  14737243 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccactt 14737144  T
Q  282 gaaatcgcgtcacgat 297  Q
    ||||||| ||||||||    
T  14737143 gaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 6136308 - 6136491
Alignment:
Q  121 caatcgtgtcacgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||||||  |||  ||||||||||||| | |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||    
T  6136308 caatcgtgtcacgattttcccaattgtgtcacgatttgcttccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcg 6136407  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||||||||||||  |||||| ||||||||    |||||||| |||||||||||||| | |||||||| ||| |||| |||||    
T  6136408 tgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggcatc-cgaaatcgtgtctcgattccaaa 6136491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 16839054 - 16839222
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    |||||||||||||||||||||| | | | | |||||| |||||||||||||||| |  | ||| ||||||||| |||      |||||||| ||||||||    
T  16839054 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggt-tgaccagt 16839152  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  16839153 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 16839222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 263
Target Start/End: Complemental strand, 28155356 - 28155167
Alignment:
Q  75 ttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||| | ||||||||||||  |||||||| | | ||| |||||| |||||||||||||||| |  | ||| ||||||||| |||      ||| ||||    
T  28155356 ttcaaaaaagcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggt 28155257  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
     |||||||||||| |||  |||||||||| ||||||||||   ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28155256 -tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 28155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 5343879 - 5343956
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  5343879 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 5343956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 6005821 - 6005898
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  6005821 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 6005898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 6097863 - 6097932
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||| ||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  6097863 atcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 6097932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 33330118 - 33330041
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  33330118 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 33330041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 33335615 - 33335538
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  33335615 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 33335538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 6438898 - 6438974
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||    
T  6438898 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatt 6438974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 2171791 - 2171897
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaac-ccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||||||| | | | ||||||||  ||||||||||||| ||| ||||| ||||||| ||||   |||||||    
T  2171791 agttgctccctttgatttcccaagtttctctctcttctagctcaccttcaaatctgcacaagaacac-ttaaatactagccttccactgataaaatcgtg 2171889  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  2171890 tcacgatt 2171897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 23896792 - 23896900
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||||| ||| |||||  ||||||||| |||||||||| | | ||||||  |  || |||||| |||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcac 23896891  T
Q  295 gatgccaaa 303  Q
    |||||||||    
T  23896892 gatgccaaa 23896900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 5757116 - 5757010
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||||| ||| |||||  ||||||||| |||||||||| | | |||||| ||  || |||| | |||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcac 5757017  T
Q  295 gatgcca 301  Q
    |||||||    
T  5757016 gatgcca 5757010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 6097785 - 6097877
Alignment:
Q  140 aaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 230  Q
    ||||| ||||||||||  |||||||  ||| ||||| ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||||||    
T  6097785 aaatcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 6097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 26253712 - 26253643
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||| | ||| ||||||| | ||| |||||  |||||||||||||||||    
T  26253712 atcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattc 26253643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 27647778 - 27647692
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaa--cccccttcaaagatgcacaagaacactttatatactggccttcctct 116  Q
    |||| |||||||||||||||||||| ||||||||||||||  | | |||||||  |||||||||||||||  |||||| | ||||||||    
T  27647778 agtttctccctttgatttcccaagtctctctctcttccaactctctcttcaaatctgcacaagaacactt--tatactagtcttcctct 27647692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 5266418 - 5266469
Alignment:
Q  86 acaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattt 137  Q
    ||||||||||   ||||||| | |||||||||||||||||||||||||||||    
T  5266418 acaagaacacaaaatatactagtcttcctctgaagcaatcgtgtcacgattt 5266469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 6097694 - 6097800
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttc-caacccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||||| | |   | ||||||||  ||||||||||||| ||| ||||| | ||||| ||||   |||||||    
T  6097694 agttgctccctttgatttcccaagtttctctctctactctctcaccttcaaatctgcacaagaacac-ttaaatactagtcttcccctgataaaatcgtg 6097792  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  6097793 tcacgatt 6097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 26253808 - 26253698
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||| |||||||| |||||| ||||||||||  | |||||  | ||| ||| ||||||||||| ||  | | ||||||| ||||||||| | |||||    
T  26253808 aatcgtgccacgatttccaaatcgtgtcacgattgatacgtacgtcacaaagtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcg 26253709  T
Q  220 tgtcacgattt 230  Q
    |||||||||||    
T  26253708 tgtcacgattt 26253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 6438845 - 6438879
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgat 249  Q
    ||||||||||||||||||| |||||||||||||||    
T  6438845 aatcgtgtcacgatttccctagatcgtgtcacgat 6438879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 3809370 - 3809414
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccct 259  Q
    |||||||||||| || ||||| |||||||||||||| ||||||||    
T  3809370 aatcgtgtcacgtttccccaaaatcgtgtcacgattgggcaccct 3809414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 9183456 - 9183500
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccct 259  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||    
T  9183456 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 9183500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 31086101 - 31086041
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | |||||||||||| ||| |||| |||||| |||||||  |||||||||||    
T  31086101 agcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaa 31086041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 306
Target Start/End: Complemental strand, 1261703 - 1261468
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaag 170  Q
    |||||||| | |||||||||||||||| ||||| ||||||||||||   |||||||||||||||| || ||| ||||||||||||  ||||   ||||||    
T  1261703 ccttcaaaaaagcacaagaacactttaaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtatgtcccaag 1261604  T
Q  171 gtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagct 270  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1261603 gtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagct 1261504  T
Q  271 cacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||| |||||||||| |||||||||||||||||    
T  1261503 cacggcatcacgaaatcgtgtcacgatgccaaattc 1261468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 25689865 - 25689604
Alignment:
Q  35 ctccctttgatttcccaagtgtctctctcttccaacccc--cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||||||  ||||||||||||||| |  |||||||||||||||||||||||| | ||||| |||||||||||  |||||||||||||    
T  25689865 ctccctttgatttcccaagt--ctctctcttccaacctcttcttcaaagatgcacaagaacacttaa-atactagccttcctctgttgcaatcgtgtcac 25689769  T
Q  133 gattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    |||||||  |||| |||||||||||| |||| | |||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  25689768 gattttctcaatcgtgtcacgatttgtgtacaaaccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttc 25689669  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    |||  |||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  25689668 ccacaatcgtgccacgattttgcaccctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 73 - 303
Target Start/End: Complemental strand, 4759820 - 4759590
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||||| | ||||||||||||  |||||||| | |||||||||||| |||||||||||||||| || ||| ||||||||||||||| |   |||||||    
T  4759820 ccttcaaacaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtgtcacgatttgcgtccgttccaaggt 4759721  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  4759720 atgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctca 4759621  T
Q  273 cggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||| |||||||| ||||||||| ||||    
T  4759620 cggcacctcgaaatcgtgtcacgatgtcaaa 4759590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 85 - 303
Target Start/End: Original strand, 36979741 - 36979958
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcct 184  Q
    ||||||||||||| | ||||| |||||||||||||||||||||| |||||||| || ||| ||||||||||||||||| |||||||||||||||||||||    
T  36979741 cacaagaacacttaa-atactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtcct 36979839  T
Q  185 tgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaa 284  Q
    | |||  |||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||||||  ||||||| ||||||||||||||| ||||    
T  36979840 tatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaa 36979939  T
Q  285 atcgcgtcacgatgccaaa 303  Q
    |||| ||||||||||||||    
T  36979940 atcgtgtcacgatgccaaa 36979958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 3439419 - 3439146
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctct--tccaaccccct--tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatc 125  Q
    |||| |||||||||||||| ||||| |||||||||  |||||| | ||  |||||  |||||||||||||||||||  || | |||||||||  | ||||    
T  3439419 agtttctccctttgatttctcaagtctctctctctcttccaactctctcttcaaatctgcacaagaacactttata--ctagtcttcctctgttgaaatc 3439322  T
Q  126 gtgtcacgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtca 224  Q
    ||||||||||||||  |||| || |||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3439321 gtgtcacgattttcccaatcgtgccacgatatgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtca 3439222  T
Q  225 cgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgcca 301  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  3439221 cgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgcca 3439146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 73 - 303
Target Start/End: Complemental strand, 18852913 - 18852683
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||||| | ||||||||||||  |||||||| | |||||||||||||||||||| |||||||| |||||| ||||||||| |||||   |||||||||    
T  18852913 ccttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttccaaatcgtgtcacgatctgcgtctgacccaaggt 18852814  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
    ||||||||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  18852813 atgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctca 18852714  T
Q  273 cggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||||  ||||||| ||||||||||||||    
T  18852713 cggcaccttgaaatcgtgtcacgatgccaaa 18852683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 85 - 303
Target Start/End: Original strand, 30656008 - 30656226
Alignment:
Q  85 cacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtcct 184  Q
    |||||||||||  |||||||| | |||||||||||||||||||| |||||||| || ||| |||||||||||||||   ||||||||| |||||||||||    
T  30656008 cacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtcct 30656107  T
Q  185 tgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaa 284  Q
    | ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||||  |||    
T  30656108 tatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaa 30656207  T
Q  285 atcgcgtcacgatgccaaa 303  Q
    |||| ||||||||||||||    
T  30656208 atcgtgtcacgatgccaaa 30656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 73 - 303
Target Start/End: Complemental strand, 18870307 - 18870077
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||||| | ||||||||||||  |||||||| | ||| |||||||||||||||| ||||||||||||||| ||||||||| |||||   |||||||||    
T  18870307 ccttcaaaaaagcacaagaacacaatatatactagtctttctctgaagcaatcgtgccacgattttcaaatcgtgtcacgatctgcgtctgacccaaggt 18870208  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
    ||||||||||||| | |  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  18870207 atgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctca 18870108  T
Q  273 cggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || || |  ||||||| ||||||||||||||    
T  18870107 cgacatcttgaaatcgtgtcacgatgccaaa 18870077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 2627650 - 2627372
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||||||||  ||||||||||||||| | ||||| ||| |||   ||   |||||||    
T  2627650 agttactccctttgatttcccaagtttctctctcttccaactctccttcaaatctgcacaagaacacttaa-atactagccctccaacgataaaatcgtg 2627552  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| || ||| |||||| | |  |||||||  | ||||  | ||||| ||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  2627551 tcacgatttacagatcgtgtcacaaatggtgcgtacgtcacaagaaacgaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 2627452  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||| ||||||||||||||||||||| ||||| | ||||||||| | |||||||||| |||||||||||||||||    
T  2627451 atttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattc 2627372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 33037505 - 33037343
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcg 240  Q
    |||| ||||||||||||||| |   |||||| ||||||||||||| |||  ||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  33037505 aatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcg 33037406  T
Q  241 tgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||||||||||  ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  33037405 tgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaa 33037343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 6311659 - 6311879
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaa--atcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||||||  |||||||| | |||||||||||| ||| ||| |||||||| | |  ||| ||||||||||||| |   ||||||||| |||| |||    
T  6311659 gcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggt-tgacaagt 6311757  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccac 281  Q
    |||| | |  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||||      
T  6311758 ccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctt 6311857  T
Q  282 gaaatcgcgtcacgatgccaaa 303  Q
    ||||||| ||||||||||||||    
T  6311858 gaaatcgtgtcacgatgccaaa 6311879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 306
Target Start/End: Original strand, 26288239 - 26288463
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| ||||||| ||||   |||||||||||||||| ||  || || ||| ||| |  |||||  | ||||||| ||||||    
T  26288239 tgcacaagaacacttaa-atactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccag 26288337  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||||| ||| ||| ||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||    
T  26288338 tccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatca 26288437  T
Q  281 cgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||  |||||||||||||||||    
T  26288438 caaaatcatgtcacgatgccaaattc 26288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 306
Target Start/End: Original strand, 26301496 - 26301720
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| ||||||| ||||   |||||||||||||||| ||  || || ||| ||| |  |||||  | ||||||| ||||||    
T  26301496 tgcacaagaacacttaa-atactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccag 26301594  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||||| ||| ||| ||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||    
T  26301595 tccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatca 26301694  T
Q  281 cgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||  |||||||||||||||||    
T  26301695 caaaatcatgtcacgatgccaaattc 26301720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 306
Target Start/End: Original strand, 26313490 - 26313714
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| ||||||| ||||   |||||||||||||||| ||  || || ||| ||| |  |||||  | ||||||| ||||||    
T  26313490 tgcacaagaacacttaa-atactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccag 26313588  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||||| ||| ||| ||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||    
T  26313589 tccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatca 26313688  T
Q  281 cgaaatcgcgtcacgatgccaaattc 306  Q
    | |||||  |||||||||||||||||    
T  26313689 caaaatcatgtcacgatgccaaattc 26313714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 83 - 297
Target Start/End: Complemental strand, 10688876 - 10688661
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaa--atcatgtcacgatttgcgtaccacccaaggtatgaccag 180  Q
    |||||||||||||  |||||||| | |||||||||||| ||| ||| |||||||| | |  ||| ||||||||||||| |   ||||||||| |||| ||    
T  10688876 tgcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggt-tgacaag 10688778  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||||| | |  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||||     
T  10688777 tccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacct 10688678  T
Q  281 cgaaatcgcgtcacgat 297  Q
     ||||||| ||||||||    
T  10688677 tgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 75 - 303
Target Start/End: Complemental strand, 7289713 - 7289483
Alignment:
Q  75 ttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaa--tcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| | ||  || ||||||||||||| |   | |||||||    
T  7289713 ttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgatccaaggt 7289614  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctca 272  Q
    | ||| ||||||| ||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||||    
T  7289613 a-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaactagctca 7289515  T
Q  273 cggc-accacgaaatcgcgtcacgatgccaaa 303  Q
     |||  ||  ||||||| ||||||||||||||    
T  7289514 tggctcccttgaaatcgtgtcacgatgccaaa 7289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 10683924 - 10683795
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcac 273  Q
    |||||||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||||    
T  10683924 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 10683825  T
Q  274 ggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||  ||||||| ||||||||||||||    
T  10683824 ggcaccttgaaatcgtgtcacgatgccaaa 10683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 36 - 303
Target Start/End: Original strand, 42575582 - 42575853
Alignment:
Q  36 tccctttgatttcccaagtgtctctctcttccaacccc-----cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtc 130  Q
    |||||||||||||||||||  |||||||||||||| ||     |||||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||    
T  42575582 tccctttgatttcccaagt--ctctctcttccaactcctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtc 42575678  T
Q  131 acgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-t 228  Q
    ||||||| |  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   |||||||||||| |    
T  42575679 acgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatt 42575778  T
Q  229 ttcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||||||| |||||| |||||||||   |||||||| |||| ||||||||| | |||||||| ||| |||| |||||    
T  42575779 ttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcgatcccaaa 42575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 273
Target Start/End: Complemental strand, 25327950 - 25327750
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||  |||     ||||||||    
T  25327950 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgagctgcaacggacccaagg 25327851  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    | |||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  25327850 t-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaactagctc 25327752  T
Q  272 ac 273  Q
    ||    
T  25327751 ac 25327750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 277
Target Start/End: Complemental strand, 15290362 - 15290224
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcccaagatc 239  Q
    |||| ||||||||||||||| |  ||||||| |  |||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||||| |||    
T  15290362 aatcgtgtcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatc 15290263  T
Q  240 gtgtcacgatttggcaccctgcaa-cctagctcacggca 277  Q
    |||||||||||||   |||||||| |||| |||||||||    
T  15290262 gtgtcacgatttgcacccctgcaaccctaactcacggca 15290224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 277
Target Start/End: Complemental strand, 15470731 - 15470593
Alignment:
Q  141 aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttcccaagatc 239  Q
    |||| ||||||||||||||| |  ||||||| |  |||||||||| ||||||||||||||||||||||||||   |||||||||||| |||||||| |||    
T  15470731 aatcgtgtcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatc 15470632  T
Q  240 gtgtcacgatttggcaccctgcaa-cctagctcacggca 277  Q
    |||||||||||||   |||||||| |||| |||||||||    
T  15470631 gtgtcacgatttgcacccctgcaaccctaactcacggca 15470593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 31043031 - 31042962
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  31043031 atcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattc 31042962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 35745793 - 35745870
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  35745793 tgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 35745870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 279
Target Start/End: Complemental strand, 39784611 - 39784404
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||| ||||||||| |||      ||| |||    
T  39784611 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccagg 39784512  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aacctagct 270  Q
    | |||||||||||| |||  |||||||||| | ||||||||  |||||||||||||||||||||||||||| |||||||| ||| || || ||| | |||    
T  39784511 t-tgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggct 39784413  T
Q  271 cacggcacc 279  Q
    |||||||||    
T  39784412 cacggcacc 39784404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 7412787 - 7412895
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||||| ||| || ||  ||||||||| |||||||||| | |||||||||||  ||  ||||| |||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcac 7412886  T
Q  295 gatgccaaa 303  Q
    |||||||||    
T  7412887 gatgccaaa 7412895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 31043125 - 31043017
Alignment:
Q  124 tcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtg 221  Q
    |||||||||||||| ||| || |||||||||| |  |||||  | ||||||| |||| |||||| ||  ||| ||||||||||||||||| | |||||||    
T  31043125 tcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtg 31043026  T
Q  222 tcacgattt 230  Q
    |||||||||    
T  31043025 tcacgattt 31043017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 15212508 - 15212460
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  15212508 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 15212460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 33037554 - 33037490
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattt 137  Q
    |||||||| | ||||||||||||  |||||||| | || | ||||||||||||||||||||||||    
T  33037554 ccttcaaaaaagcacaagaacacaatatatactagtctccttctgaagcaatcgtgtcacgattt 33037490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 1746477 - 1746516
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttcca 68  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  1746477 aagttgcttcctttgatttcccaagtttctctctcttcca 1746516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 1746665 - 1746700
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1746665 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 1746700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 34256951 - 34256986
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  34256951 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 34256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 17982562 - 17982525
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  17982562 aagttgcttcctttgatttcccaagtttctctctcttc 17982525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 19948580 - 19948617
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  19948580 aagttgcttcctttgatttcccaagtttctctctcttc 19948617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 22976038 - 22975993
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 260  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||    
T  22976038 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 22975993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 31218166 - 31218129
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  31218166 aagttgcttcctttgatttcccaagtttctctctcttc 31218129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 5702109 - 5702049
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | |||||||||||| ||| |||| |||||| |||||||  |||||||||||    
T  5702109 agcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaa 5702049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 30143064 - 30143016
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||  |||||||| |||||||||||||| | ||||||||||    
T  30143064 aatcgtgtcacattttcccaaaatcgtgtcacgattggacaccctgcaa 30143016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 42435655 - 42435703
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| || ||||| |||||||||||||| | ||||||||||    
T  42435655 aatcgtgtcacgtttccccaaaatcgtgtcacgattggacaccctgcaa 42435703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 43036145 - 43036097
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| ||| |||| |||||||||||||| | ||||||||||    
T  43036145 aatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaa 43036097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 11422 - 11699
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttcaaaga-tgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | |||||||   ||||||||||||||| | ||||| ||||||| ||||   |||||||    
T  11422 agttactccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcacaagaacacttaa-atactagccttccactgataaaatcgtg 11520  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| || ||| ||||||||||  |||||||  ||||||||| ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  11521 tcacgatttccagatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 11620  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||||| || ||||||| |||||||||||||||||    
T  11621 atttcccaa-atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattc 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 140 - 306
Target Start/End: Original strand, 9087 - 9254
Alignment:
Q  140 aaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaaga 237  Q
    ||||| ||||||||||  |||||||  ||||||||| ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||||||||||| |    
T  9087 aaatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-a 9185  T
Q  238 tcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    || ||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  9186 tcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 9254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 8996 - 9102
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaacccccttc-aaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | |||| |||  ||||||||||||| ||| ||||| ||||||| ||||   |||||||    
T  8996 agttactccctttgatttcccaagtttctctctcttccaactctcttcaaaatctgcacaagaacac-ttaaatactagccttccactgataaaatcgtg 9094  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  9095 tcacgatt 9102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 9e-67; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 83 - 303
Target Start/End: Original strand, 24742301 - 24742521
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    |||||||||||||  |||||||| | |||||||||||| |||||||||||||||| || ||| || |||||||||||| |   || ||||||||||||||    
T  24742301 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtc 24742400  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||| ||    
T  24742401 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcg 24742500  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  24742501 aaatcgtgtcacgatgccaaa 24742521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 29 - 306
Target Start/End: Original strand, 13992545 - 13992825
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttccaaccc--ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcg 126  Q
    |||||||| ||||||||||||||||| ||||||||||| | | |  ||| ||||  ||||||||||||||| | ||||| | ||||| ||||   |||||    
T  13992545 aagttgctacctttgatttcccaagtttctctctcttcaagctctccctccaaatctgcacaagaacacttaa-atactagtcttccactgataaaatcg 13992643  T
Q  127 tgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtca 224  Q
    ||||||||||| || ||| ||||||||||  | |||||  | ||||||||||||||||||| ||| | | ||||||||||||||||| | ||||||||||    
T  13992644 tgtcacgatttccagatcgtgtcacgattgatacgtacgtcacaaggtatgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtca 13992743  T
Q  225 cgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||||| || |||||||||| |||||||||||||||||    
T  13992744 cgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaaattc 13992825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 31495570 - 31495848
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaaccc-ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||||||||  ||||||||||||||| | ||| | ||| ||| ||||   |||||||    
T  31495570 agttactccctttgatttcccaagtttctctctcttccaactctccttcaaatctgcacaagaacacttaa-atattagccctccactgataaaatcgtg 31495668  T
Q  129 tcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacg 226  Q
    ||||||||| ||  |  ||||||||||  ||||| |  ||||||  | ||||||||||| ||| ||| |||||||||||||||||   ||||||||||||    
T  31495669 tcacgatttccaggttgtgtcacgattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 31495768  T
Q  227 atttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  31495769 atttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattc 31495848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 51520775 - 51520994
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtc 182  Q
    ||||||||||||  |||||||| |||||||||||||||||| ||| |||||||| | ||||| |||||||||||||||   |||||||||| || |||||    
T  51520775 gcacaagaacacaatatatactagccttcctctgaagcaattgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gatcagtc 51520873  T
Q  183 cttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacg 282  Q
    ||| ||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||  |    
T  51520874 cttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttg 51520973  T
Q  283 aaatcgcgtcacgatgccaaa 303  Q
    |||||| ||||||||||||||    
T  51520974 aaatcgtgtcacgatgccaaa 51520994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 140 - 297
Target Start/End: Original strand, 29761039 - 29761196
Alignment:
Q  140 aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatc 239  Q
    ||||| || |||||||||||| |   |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  29761039 aaatcgtgccacgatttgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 29761138  T
Q  240 gtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    ||| |||||||||||  ||||||| ||||||||||||||| |||||||| ||||||||    
T  29761139 gtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 122 - 306
Target Start/End: Complemental strand, 28468217 - 28468031
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||| ||| || ||||||||||||  |||||  | ||||||| ||||||||||| |||  || ||||||||||||||||| | |||||    
T  28468217 aatcgtgtcacgatttccaagtcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatcg 28468118  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||| || ||||||||||||||    
T  28468117 tgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattc 28468031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 8393305 - 8393038
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct----tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||| ||  |||||||||||||||| ||    |||||  |||||||||||||||||||  || |||||||||||  | |||||||||||    
T  8393305 ccctttgatttcccaggt--ctctctcttccaaccctctctcttcaaatctgcacaagaacactttata--ctagccttcctctgttgaaatcgtgtcac 8393210  T
Q  133 gattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    ||||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| ||| ||||||||||||||||||||||   |||||||||||||||     
T  8393209 gatttcccaaatcgtgtcacgatctgcgtaccacccaagaaaagaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgatttt 8393110  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || | |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  8393109 cccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaa 8393038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 75 - 303
Target Start/End: Complemental strand, 56141797 - 56141567
Alignment:
Q  75 ttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaa--tcatgtcacgatttgcgtaccacccaaggt 172  Q
    |||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| | ||  || ||||||||||||| |   |||||||||    
T  56141797 ttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggt 56141698  T
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacga-tttggcaccctgcaacctagctc 271  Q
    | ||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||    
T  56141697 a-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactagctc 56141599  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||| | || | |||||| ||||||||||||||    
T  56141598 acgacccctccaaatcgtgtcacgatgccaaa 56141567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 8395514 - 8395247
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccccct----tcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||||  |||||||||||||||| ||    |||||  |||||||||||||||||||  || |||||||||||  | |||||||||||    
T  8395514 ccctttgatttcccaagt--ctctctcttccaaccctctctcttcaaatctgcacaagaacactttata--ctagccttcctctgttgaaatcgtgtcac 8395419  T
Q  133 gattttc-aaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    ||||| | ||||| ||||||||| |||||||||||||||  | ||||||||||| ||| ||||||||||||||||||||||   || ||||||||||||     
T  8395418 gatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgatttt 8395319  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    || | ||||||  ||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  8395318 cccaaatcgtgctacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaa 8395247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 7122591 - 7122323
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacc----cccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcac 132  Q
    ||||||||||||||||||  ||||||||| |||||    | |||||||  ||||||||||||||| |  |||| | |||||||||   ||||||||||||    
T  7122591 ccctttgatttcccaagt--ctctctctttcaaccttctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcac 7122495  T
Q  133 gattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttc 231  Q
    |||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||    
T  7122494 gattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttc 7122395  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||  |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  7122394 ccacaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaa 7122323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 5135973 - 5135705
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||||||||||| |||||||  ||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  5135973 ccctttgatttcccaagtttctctct--tccaacctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 5135877  T
Q  134 attt-tcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttc 231  Q
    |||| || |||| ||||||||||||||| |  ||||||| | |||| |||||| ||||||||||||||||||||||||||   |||||||||||| ||||    
T  5135876 atttgtccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttc 5135777  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||| |||||| |||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  5135776 ccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 5135705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 37 - 303
Target Start/End: Complemental strand, 5138199 - 5137931
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc---cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    |||||||||||||||||| |||||||  ||||||| |   |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  5138199 ccctttgatttcccaagtttctctct--tccaacctctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 5138103  T
Q  134 attt-tcaaatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttc 231  Q
    |||| || |||| ||||||||||||||| |  ||||||| | |||| |||||| ||||||||||||||||||||||||||   |||||||||||| ||||    
T  5138102 atttgtccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttc 5138003  T
Q  232 ccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||| |||||| |||||||||   |||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  5138002 ccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaa 5137931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 9228972 - 9228742
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | |||||||||||| ||||||| |||||||| |  | ||| ||||||||| |||     ||||||||    
T  9228972 cttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaagg 9228873  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    || ||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| | |||||    
T  9228872 ta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacgagctc 9228774  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||  |  ||||||| ||||||||||||||    
T  9228773 acggccacttgaaatcgtgtcacgatgccaaa 9228742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 5733061 - 5733191
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagc-tca 272  Q
    |||||||||||| |||  |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||| || || |||    
T  5733061 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 5733160  T
Q  273 cggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||||||||||||| ||||||||||||||    
T  5733161 cggcaccacgaaatcgtgtcacgatgccaaa 5733191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 9224185 - 9223955
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||| ||||||||  |||||||| | |||||||||||| ||| ||| |||||||| |  | ||| ||||||||| |||     ||||||||    
T  9224185 cttcaaaaaagcagaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaagg 9224086  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    || ||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||    
T  9224085 ta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctc 9223987  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||  |  ||||||| ||||||||||||||    
T  9223986 acggccacttgaaatcgtgtcacgatgccaaa 9223955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 18712541 - 18712311
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| ||||||||||  | ||  ||||||||| | |     ||||||||    
T  18712541 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgattttcctagattgtgtcacgatcttcaacggacccaagg 18712442  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctc 271  Q
    | |||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||    
T  18712441 t-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctc 18712343  T
Q  272 acggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||||  |  ||||||| ||||||||||||||    
T  18712342 acggccacttgaaatcgtgtcacgatgccaaa 18712311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 175 - 303
Target Start/End: Complemental strand, 7124673 - 7124545
Alignment:
Q  175 gaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcac 273  Q
    ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||||   |||||||| ||||||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7124574  T
Q  274 ggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    |||| | |||||||| |||||||| |||||    
T  7124573 ggcatc-cgaaatcgtgtcacgatcccaaa 7124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 279
Target Start/End: Original strand, 18856023 - 18856230
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||| |||||||| |  | ||||||||||||| |||       || |||    
T  18856023 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgcaacggttcccagg 18856122  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aacctagct 270  Q
    | |||||||||||| |||  |||||||||| ||||||||||  ||||||||||||||||||||||||| || |||||||| ||| || || ||| | |||    
T  18856123 t-tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggct 18856221  T
Q  271 cacggcacc 279  Q
    |||||||||    
T  18856222 cacggcacc 18856230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 45347502 - 45347425
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  45347502 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 45347425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 45356983 - 45356906
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  45356983 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 45356906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 3814421 - 3814549
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcac 273  Q
    |||||||||||| |||  |||||||||| ||||||||||  ||||||||||||||||||||| |||||| |||||||||||  | ||||| || ||| ||    
T  3814421 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaacttgcttac 3814519  T
Q  274 ggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||   |  ||||||| ||||||||||||||    
T  3814520 ggtcacttgaaatcgtgtcacgatgccaaa 3814549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 31985250 - 31985181
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||| | ||||||||||| | ||| |||||| |||||||||||||||||    
T  31985250 atcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattc 31985181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 31985346 - 31985236
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||| |||||||| |||||| ||||||||||  |||||||  | ||||||| ||||||||||| ||  | | ||||||| ||||||||| | |||||    
T  31985346 aatcgtgccacgatttccaaatcgtgtcacgattgatgcgtacgtcacaaggtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcg 31985247  T
Q  220 tgtcacgattt 230  Q
    |||||||||||    
T  31985246 tgtcacgattt 31985236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 8689208 - 8689078
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||| ||| |||||| || |||||||  ||||||| |||||||||| |||||  |||| ||  | | || || | ||||||||| | |||||    
T  8689208 aatcgtgtcacgttttccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcg 8689110  T
Q  220 tgtcacgatttcccaagatcgtgtcacgattt 251  Q
    ||||||| |||||||| |||||||||||||||    
T  8689109 tgtcacgttttcccaaaatcgtgtcacgattt 8689078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 16628506 - 16628441
Alignment:
Q  198 taacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||| ||||||||| | |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  16628506 taacaagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 16628441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 54882544 - 54882496
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  54882544 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaa 54882496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 3814320 - 3814383
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattt 137  Q
    ||||||| | ||||||||||||  |||||||| | ||||| |||||| ||||||||||||||||    
T  3814320 cttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgtcacgattt 3814383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 5370522 - 5370557
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  5370522 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 5370557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 3778014 - 3778076
Alignment:
Q  201 cgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||| ||| | |||||||||||| |||||||| |||||| |||||||  |||||||||||    
T  3778014 cgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaa 3778076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 29761001 - 29761055
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattt 137  Q
    |||||||||||||  |||||||| | |||||||||||| ||||||| ||||||||    
T  29761001 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgattt 29761055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 45357036 - 45357002
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgat 249  Q
    ||||||||||||||||||| |||||||||||||||    
T  45357036 aatcgtgtcacgatttccctagatcgtgtcacgat 45357002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 52095807 - 52095852
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 260  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||    
T  52095807 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 52095852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 2209224 - 2209176
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| || ||||| |||||||||||||| ||||| ||||||    
T  2209224 aatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaa 2209176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 5429402 - 5429354
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||| ||||| |||||||| |||||||||||||| | ||||||||||    
T  5429402 aatcgtatcacgttttcccaaaatcgtgtcacgattagacaccctgcaa 5429354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 26176070 - 26176118
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| || |||||||| || ||||||||||||    
T  26176070 aatcgtgtcacgttttcccaaaattgtgtcacggttgggcaccctgcaa 26176118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 26363769 - 26363725
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccct 259  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||    
T  26363769 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 26363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 37 - 279
Target Start/End: Complemental strand, 6183 - 5938
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaacccc-cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgat 135  Q
    |||||||||||||||||| |||||||||||||||| | |||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||||    
T  6183 ccctttgatttcccaagtctctctctcttccaacctctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgat 6085  T
Q  136 tttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacga-tttccc 233  Q
    ||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| ||    
T  6084 tttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgcc 5985  T
Q  234 aagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    |  |||||| ||||| || ||||||||||| ||||||||||||||||    
T  5984 acaatcgtgacacgaatttgcaccctgcaaccctagctcacggcacc 5938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 17624 - 17485
Alignment:
Q  167 caaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacct 266  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||| |     
T  17624 caaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 17525  T
Q  267 agctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  17524 agctcacggcatcacgaaatcgtgtcacgatgccaaattc 17485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 167 - 308
Target Start/End: Complemental strand, 22132 - 21991
Alignment:
Q  167 caaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacct 266  Q
    ||||||| |||| |||||| |||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||    
T  22132 caaggtacgacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaact 22033  T
Q  267 agctcacggcaccacgaaatcgcgtcacgatgccaaattcat 308  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  22032 agctcacggcacctcgaaatcgtgtcacgatgccaaattcat 21991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 22252 - 22146
Alignment:
Q  30 agttgctccctttgatttcccaagtgtctctctcttccaac-ccccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtg 128  Q
    ||||||||||||||||||||||||| ||||||||||| | | | ||||||||  ||||||||||||| ||| ||||| ||||||| ||||   |||||||    
T  22252 agttgctccctttgatttcccaagtttctctctcttctagctcaccttcaaatctgcacaagaacac-ttaaatactagccttccactgataaaatcgtg 22154  T
Q  129 tcacgatt 136  Q
    ||||||||    
T  22153 tcacgatt 22146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 306
Target Start/End: Complemental strand, 760 - 536
Alignment:
Q  83 tgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttcaaatcatgtcacgatttg--cgtaccacccaaggtatgaccag 180  Q
    ||||||||||||||| | ||||| | ||||| ||||   |||||||||||||||| |||||| |||||| ||| |  |||||  | ||||||| ||||||    
T  760 tgcacaagaacacttaa-atactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacaattggtacgtacgtcacaaggtacgaccag 662  T
Q  181 tccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcacca 280  Q
    ||| | ||  ||| ||||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  661 tccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatca 562  T
Q  281 cgaaatcgcgtcacgatgccaaattc 306  Q
    |||||||| |||||||||||||||||    
T  561 cgaaatcgtgtcacgatgccaaattc 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 826 - 789
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  826 aagttgctgcctttgatttcccaagtttctctctcttc 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 303
Target Start/End: Original strand, 2862 - 3129
Alignment:
Q  37 ccctttgatttcccaagtgtctctctcttccaaccc---ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacg 133  Q
    ||||||||||||||||||  |||||||||||||| |   ||||||||  ||||||||||||||| |  |||| | |||||||||   |||||||||||||    
T  2862 ccctttgatttcccaagt--ctctctcttccaactctctccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacg 2958  T
Q  134 attttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcc 232  Q
    ||||||  |||| ||||||||||||||| |  ||||||| | ||||||||||| ||||| ||||||||||||||||||||   |||||||||||||||||    
T  2959 attttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcc 3058  T
Q  233 caagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcaccacgaaatcgcgtcacgatgccaaa 303  Q
    ||  |||||| |||||||||   |||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  3059 cacaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaa 3129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 279
Target Start/End: Original strand, 4071 - 4231
Alignment:
Q  121 caatcgtgtcacgattttca-aatcatgtcacgatttgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    |||||||||||||||||||  |||  ||||||||||||||| |  ||||||| | ||||||||||| ||||||||||||||||||||||||||   ||||    
T  4071 caatcgtgtcacgattttcccaattgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcg 4170  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa-cctagctcacggcacc 279  Q
    |||||||||||||||  |||||| |||||||||   |||||||| ||||||||||||||||    
T  4171 tgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggcacc 4231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 3613 - 3393
Alignment:
Q  84 gcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaaggtatgaccagt 181  Q
    ||||||||| ||  |||||||| | ||||| |||||| ||||||||||||||||||  | ||| ||||||||| |||      ||| |||| |||| |||    
T  3613 gcacaagaatacaatatatactagtcttcccctgaagaaatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggt-tgactagt 3515  T
Q  182 ccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccac 281  Q
    |||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||| ||| ||||||||||||  |      
T  3514 ccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcacggccactt 3415  T
Q  282 gaaatcgcgtcacgatgccaaa 303  Q
    ||||||| ||||||||| ||||    
T  3414 gaaatcgtgtcacgatgtcaaa 3393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 8098 - 8230
Alignment:
Q  164 acccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| |||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||||||  |||||||    
T  8098 acccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 8196  T
Q  264 cctagctcacggcaccacgaaatcgcgtcacgat 297  Q
     ||||||||||||  |  ||||||| ||||||||    
T  8197 actagctcacggccacttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 254
Target Start/End: Complemental strand, 34840 - 34659
Alignment:
Q  74 cttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaagg 171  Q
    ||||||| | ||| ||||||||  |||||||| | |||||||||||| ||| ||| |||||||| |  | ||| ||||||||| |||     ||||||||    
T  34840 cttcaaaaaagcaaaagaacacaatatatactagtcttcctctgaagaaatagtgccacgatttccctagatcgtgtcacgatctgcaacggacccaagg 34741  T
Q  172 tatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggc 254  Q
    || ||| ||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  34740 ta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 34659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 2026 - 1847
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaag 170  Q
    |||||||| | |||||||||||||||||||||| | | | | |||||| |||||||||||||||| |  | ||| ||||||||| |||      ||||||    
T  2026 ccttcaaataagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaag 1927  T
Q  171 gtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    || |||||||||||| |||  || ||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  1926 gt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 1847  T

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Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 148731 - 148552
Alignment:
Q  73 ccttcaaagatgcacaagaacactttatatactggccttcctctgaagcaatcgtgtcacgattttc--aaatcatgtcacgatttgcgtaccacccaag 170  Q
    |||||||| | |||||||||||||||||||||| | | | | |||||| |||||||||||||||| |  | ||| ||||||||| |||      ||||||    
T  148731 ccttcaaataagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaag 148632  T
Q  171 gtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    || |||||||||||| |||  || ||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  148631 gt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 148552  T

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Target: scaffold0464 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 760 - 866
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aacctagctca 272  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||| ||| || || ||| | |||||    
T  760 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 859  T
Q  273 cggcacc 279  Q
    |||||||    
T  860 cggcacc 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 707 - 741
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgat 249  Q
    ||||||||||||||||||| |||||||||||||||    
T  707 aatcgtgtcacgatttccctagatcgtgtcacgat 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 13969 - 13892
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  13969 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 13892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 18850 - 18772
Alignment:
Q  173 atgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||| || |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  18850 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattt 18772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 176635 - 176558
Alignment:
Q  174 tgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 251  Q
    |||||||||||| |||  |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  176635 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 176558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 8034 - 7965
Alignment:
Q  237 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgatgccaaattc 306  Q
    ||||||||||||||||||||||||||| | | ||||||||| ||| |||||| |||||||||||||||||    
T  8034 atcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattc 7965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 132991 - 132815
Alignment:
Q  122 aatcgtgtcacgattttcaaatcatgtcacgatt--tgcgtaccacccaaggtatgaccagtccttgtcaaggatacttaacgagcaagtttcacaatcg 219  Q
    ||||||| |||| ||| |||||| ||||||||||  | ||||| |||||||||| |||||  |||| ||  | | ||||||| ||||||||| | ||||     
T  132991 aatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatca 132893  T
Q  220 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcacgat 297  Q
    |||||||||| | ||| |||||||||||||||| ||| |||||| | |||||||| || ||| |||||| | ||||||    
T  132892 tgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgat 132815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 1248 - 1140
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | ||||||||||||||||| ||| |||||  ||||||||| |||||||||| | | ||||||  |  || |||||| |||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcac 1149  T
Q  295 gatgccaaa 303  Q
    |||||||||    
T  1148 gatgccaaa 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 43599 - 43493
Alignment:
Q  195 acttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgcgtcac 294  Q
    ||||||| ||||||||| | |||| |||||||||||| ||| |||||  ||||||||| ||||||| || | |||||||| ||  || |||||| |||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcac 43500  T
Q  295 gatgcca 301  Q
    |||||||    
T  43499 gatgcca 43493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 45666 - 45726
Alignment:
Q  203 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    ||||||||| | ||||||||||||||||| ||  |||||| ||||||||| ||||||||||    
T  45666 agcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaa 45726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 434253 - 434218
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  434253 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 434442 - 434405
Alignment:
Q  29 aagttgctccctttgatttcccaagtgtctctctcttc 66  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  434442 aagttgcttcctttgatttcccaagtttctctctcttc 434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 17710 - 17758
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| ||||||||||| || | ||||||||||    
T  17710 aatcgtgtcacgttttcccaaaatcgtgtcacggttggacaccctgcaa 17758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 20861 - 20909
Alignment:
Q  215 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 263  Q
    |||||||||||| |||||||| ||||||||| |||| | ||||||||||    
T  20861 aatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccctgcaa 20909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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