View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0950_low_8 (Length: 458)

Name: NF0950_low_8
Description: NF0950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0950_low_8
NF0950_low_8
[»] chr8 (11 HSPs)
chr8 (1-442)||(10800194-10800635)
chr8 (71-135)||(41663971-41664035)
chr8 (71-135)||(8301276-8301340)
chr8 (71-119)||(17660330-17660378)
chr8 (71-135)||(20492251-20492315)
chr8 (73-144)||(3758267-3758338)
chr8 (73-116)||(6902412-6902455)
chr8 (71-116)||(13878090-13878135)
chr8 (71-119)||(36158642-36158690)
chr8 (71-132)||(43247138-43247199)
chr8 (71-119)||(28452711-28452759)
[»] chr7 (20 HSPs)
chr7 (1-442)||(47550091-47550532)
chr7 (1-442)||(47554556-47554997)
chr7 (1-442)||(22864261-22864703)
chr7 (1-305)||(20704007-20704311)
chr7 (1-305)||(20872051-20872355)
chr7 (7-323)||(588170-588486)
chr7 (7-327)||(12122968-12123288)
chr7 (7-327)||(37074110-37074430)
chr7 (71-135)||(17722108-17722172)
chr7 (71-135)||(29969447-29969511)
chr7 (73-115)||(8772337-8772379)
chr7 (71-135)||(45460785-45460849)
chr7 (73-115)||(18768896-18768938)
chr7 (14-100)||(27278626-27278711)
chr7 (253-321)||(24820494-24820562)
chr7 (70-119)||(34233190-34233239)
chr7 (73-110)||(37938952-37938989)
chr7 (211-308)||(48779403-48779500)
chr7 (71-119)||(13637266-13637314)
chr7 (71-135)||(34207803-34207867)
[»] chr5 (13 HSPs)
chr5 (1-413)||(29326494-29326906)
chr5 (166-323)||(11267411-11267568)
chr5 (214-327)||(6677321-6677434)
chr5 (71-135)||(23239854-23239918)
chr5 (70-119)||(36257264-36257313)
chr5 (71-119)||(1822338-1822386)
chr5 (71-119)||(6050729-6050777)
chr5 (73-132)||(19509611-19509670)
chr5 (73-119)||(22561406-22561452)
chr5 (73-115)||(38358960-38359002)
chr5 (71-144)||(25856042-25856115)
chr5 (71-119)||(6999606-6999654)
chr5 (71-135)||(27164698-27164762)
[»] chr3 (19 HSPs)
chr3 (38-442)||(16665245-16665650)
chr3 (1-440)||(10755332-10755771)
chr3 (7-327)||(17152330-17152650)
chr3 (7-327)||(3516066-3516386)
chr3 (82-323)||(8596643-8596884)
chr3 (166-353)||(30737877-30738064)
chr3 (7-237)||(9827236-9827466)
chr3 (25-227)||(23823194-23823396)
chr3 (168-327)||(9820442-9820601)
chr3 (1-43)||(16672075-16672117)
chr3 (70-119)||(8131462-8131511)
chr3 (70-135)||(16185784-16185849)
chr3 (71-132)||(21739097-21739158)
chr3 (71-119)||(30165926-30165974)
chr3 (71-116)||(19918835-19918880)
chr3 (55-104)||(52906630-52906679)
chr3 (71-131)||(2365755-2365815)
chr3 (71-135)||(12333691-12333755)
chr3 (169-237)||(12953887-12953955)
[»] chr6 (10 HSPs)
chr6 (1-442)||(5390031-5390472)
chr6 (7-327)||(18293915-18294235)
chr6 (7-327)||(2895585-2895906)
chr6 (71-135)||(2555077-2555141)
chr6 (71-119)||(11059465-11059513)
chr6 (225-314)||(12150236-12150325)
chr6 (71-132)||(13087019-13087080)
chr6 (73-110)||(21550344-21550381)
chr6 (71-135)||(1307270-1307334)
chr6 (71-135)||(17604937-17605001)
[»] chr4 (17 HSPs)
chr4 (101-442)||(36952468-36952806)
chr4 (7-327)||(23156670-23156990)
chr4 (7-327)||(15647587-15647907)
chr4 (25-323)||(17825319-17825617)
chr4 (7-264)||(25136461-25136718)
chr4 (71-135)||(1827144-1827208)
chr4 (71-119)||(7661911-7661959)
chr4 (71-119)||(20397054-20397102)
chr4 (71-131)||(47420281-47420341)
chr4 (73-116)||(26695420-26695463)
chr4 (70-119)||(19161772-19161821)
chr4 (70-119)||(40689556-40689605)
chr4 (221-305)||(137430-137514)
chr4 (71-119)||(29552404-29552452)
chr4 (71-119)||(10561928-10561976)
chr4 (71-119)||(23280292-23280340)
chr4 (211-287)||(28049441-28049517)
[»] chr1 (10 HSPs)
chr1 (25-323)||(49371153-49371451)
chr1 (1-332)||(26997337-26997667)
chr1 (71-136)||(39431758-39431823)
chr1 (71-136)||(20797132-20797197)
chr1 (71-135)||(35542507-35542571)
chr1 (71-119)||(32643360-32643408)
chr1 (73-135)||(17132112-17132174)
chr1 (73-114)||(14342581-14342622)
chr1 (55-104)||(19043627-19043676)
chr1 (214-290)||(50816713-50816789)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-332)||(223227-223573)
[»] chr2 (14 HSPs)
chr2 (7-327)||(21965975-21966295)
chr2 (71-136)||(9667609-9667674)
chr2 (73-115)||(28399155-28399197)
chr2 (70-119)||(6724255-6724304)
chr2 (208-284)||(37326982-37327058)
chr2 (73-127)||(4221544-4221598)
chr2 (71-132)||(11230239-11230300)
chr2 (76-116)||(35489329-35489369)
chr2 (73-119)||(39115623-39115669)
chr2 (70-119)||(2206424-2206473)
chr2 (71-116)||(10690030-10690075)
chr2 (70-119)||(13417148-13417197)
chr2 (71-135)||(3152422-3152486)
chr2 (339-407)||(24522099-24522167)
[»] scaffold0032 (1 HSPs)
scaffold0032 (23-322)||(56937-57236)
[»] scaffold0472 (1 HSPs)
scaffold0472 (71-135)||(4725-4789)
[»] scaffold0121 (1 HSPs)
scaffold0121 (73-332)||(32917-33176)
[»] scaffold0112 (1 HSPs)
scaffold0112 (71-113)||(14269-14311)
[»] scaffold0007 (1 HSPs)
scaffold0007 (72-119)||(183604-183651)
[»] scaffold0183 (1 HSPs)
scaffold0183 (74-116)||(20465-20507)


Alignment Details
Target: chr8 (Bit Score: 370; Significance: 0; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 10800194 - 10800635
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10800194 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggtaaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcttatg 10800293  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| |    
T  10800294 attctgttgattggggttacattgatgaggttatgattaagatgaattttccgtgtgtttagcggtcttggattatggaatgtattacaacggcgacgac 10800393  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10800394 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgaaaggggtctccgtcaaggggatccgctttctccgtttttgttccttttagcagct 10800493  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||| |||| |||||||||||||    
T  10800494 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccatatgctataggggcgcaagctaatgtgctggtttctcatttgcagt 10800593  T
Q  401 ttgcagatgataccttagtagtaggagttaagtcctgggcaa 442  Q
    ||||||||||||| ||| |||||||||||||||| |||||||    
T  10800594 ttgcagatgatactttactagtaggagttaagtcttgggcaa 10800635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 41663971 - 41664035
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||| ||||||||||| || |||||||||||||||||||| ||| ||||||||||||||    
T  41663971 tgttcaaagtagattttgaaaaggcgtatgattctgttgattgggggtaccttgatgaggttatg 41664035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 8301340 - 8301276
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||||||||||||||| || | |||||||||||||||||| ||  ||||||||||||||    
T  8301340 tgttcaaagtggattttgaaaaggcgtttgattctgttgattgggggtatcttgatgaggttatg 8301276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 17660378 - 17660330
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  17660378 tgtttaaggtggattttgaaaaggcctatgattctgtcgattggggtta 17660330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 20492315 - 20492251
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||||||||||||||| || | |||||||||||||||||| ||  ||||||||||||||    
T  20492315 tgttcaaagtggattttgaaaaggcgtttgattctgttgattgggggtatcttgatgaggttatg 20492251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 3758267 - 3758338
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatgattaagatg 144  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||| | |||||||| |||  |||||||    
T  3758267 tttaaagtggattttgagaaagcctttgattctattgattgaggttacttggatgaggtgatgtgtaagatg 3758338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 6902455 - 6902412
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  6902455 tttaaagtagattttgaaaaagcctacgattctgttgattgggg 6902412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 13878090 - 13878135
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||    
T  13878090 tgtttaaagtggattttgaaaaggcgtatgactctgttgattgggg 13878135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 36158690 - 36158642
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||||||||| || ||||| |||||||||||||||||    
T  36158690 tgtttaaggtggattttgaaaaggcttatgactctgttgattggggtta 36158642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 43247138 - 43247199
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggtt 132  Q
    ||||||||||||||||||||||  | || || || ||||||||||||||| ||| |||||||    
T  43247138 tgtttaaagtggattttgaaaagacttacgactccgttgattggggttaccttggtgaggtt 43247199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 28452711 - 28452759
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||| || ||||| ||||||||||||||| | |||||||||||    
T  28452711 tgtttaaagtcgactttgagaaagcctatgattctatagattggggtta 28452759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Complemental strand, 47550532 - 47550091
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47550532 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggtcaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcttatg 47550433  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| |    
T  47550432 attctgttgattggggttacattgatgaggttatgattaagatgaattttccgtgtgtttcgcggtcttggattatggaatgtattacaacggcgacgac 47550333  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47550332 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgaaaggggtctccgtcaaggggatccgctttctccgtttttgttccttttagcagct 47550233  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||| ||||||| |||| ||||| |||||||    
T  47550232 gaagatttaaatgtgatgatgtctgcattggtaacgtctgggttgttcactccatatgctataggggcgcaagctaatgtgctggtttctcacttgcagt 47550133  T
Q  401 ttgcagatgataccttagtagtaggagttaagtcctgggcaa 442  Q
    | ||||||||||| ||| |||||||||||||||| |||||||    
T  47550132 tcgcagatgatactttactagtaggagttaagtcttgggcaa 47550091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Complemental strand, 47554997 - 47554556
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47554997 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggtcaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcttatg 47554898  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| |    
T  47554897 attctgttgattggggttacattgatgaggttatgattaagatgaattttccgtgtgtttcgcggtcttggattatggaatgtattacaacggcgacgac 47554798  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47554797 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgaaaggggtctccgtcaaggggatccgctttctccgtttttgttccttttagcagct 47554698  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||| ||||||| |||| ||||| |||||||    
T  47554697 gaagatttaaatgtgatgatgtctgcattggtaacgtctgggttgttcactccatatgctataggggcgcaagctaatgtgctggtttctcacttgcagt 47554598  T
Q  401 ttgcagatgataccttagtagtaggagttaagtcctgggcaa 442  Q
    | ||||||||||| ||| |||||||||||||||| |||||||    
T  47554597 tcgcagatgatactttactagtaggagttaagtcttgggcaa 47554556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 22864261 - 22864703
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22864261 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggtcaaaaagaaaaagttactcatgtttaaagtggattttgaaaaagcttatg 22864360  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  22864361 attctgatgattggggctacattgatgaggttatgattaagatgaattttccgtgtgtttggcggtcttggattatggaatgtattacaacggcgacgac 22864460  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22864461 atctgtgttagttaatgggtgcccgactgatgagtttaatcttgaaaggggtctccgtcaaggggatccgctttctccgtttttgttccttttagcagct 22864560  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||| |||| ||||| |||||||    
T  22864561 gaaggtttaaatgtgatgatgtctgcgttggtaacgactgggttgttcactccatatgctattggggcgcaagctaatgtgatggtttctcacttgcagt 22864660  T
Q  401 ttgcagatgatacctt-agtagtaggagttaagtcctgggcaa 442  Q
    ||||||||||||| || | |||||||||||||||| |||||||    
T  22864661 ttgcagatgatactttaactagtaggagttaagtcttgggcaa 22864703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 20704007 - 20704311
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    ||||||||||| ||||||||||| ||||| ||||| |||||||| |||  | |||||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  20704007 attcttgatgggattttgattgctaatgagttagttgatgatgcgaagtgtcaaaagaaagacttacttatgtttaaggtggattttgagaaagcctatg 20704106  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||| || |||||||||||  | || ||||||||| | || ||||| |||||  | || |||||   |||||| |||||||||||||||||||| || ||    
T  20704107 attcagtcgattggggttatctagaggaggttatggtcaaaatgaattttccaagggtgtggcgagtttggataatggaatgtgttacaacggcaaccgc 20704206  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
     || ||| ||||||||||||| ||||| ||||||||| || |||||||||||||||| ||||||||||| ||||| || ||||||||| | ||||||||     
T  20704207 ttccgtgctagttaatgggtgcccgacggatgagtttcatttcgagagaggtctccggcaaggggatcctctttccccatttttgtttttgttagcagca 20704306  T
Q  301 gaagg 305  Q
    |||||    
T  20704307 gaagg 20704311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 20872051 - 20872355
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    ||||||||||| ||||||||||| ||||| ||||| |||||||| |||  | |||||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  20872051 attcttgatgggattttgattgctaatgagttagttgatgatgcgaagtgtcaaaagaaagacttacttatgtttaaggtggattttgagaaagcctatg 20872150  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||| || |||||||||||  | || ||||||||| | || ||||| |||||  | || |||||   |||||| |||||||||||||||||||| || ||    
T  20872151 attcagtcgattggggttatctagaggaggttatggtcaaaatgaattttccaagggtgtggcgagtttggataatggaatgtgttacaacggcaaccgc 20872250  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
     || ||| ||||||||||||| ||||| ||||||||| || |||||||||||||||| ||||||||||| ||||| || ||||||||| | ||||||||     
T  20872251 ttccgtgctagttaatgggtgcccgacggatgagtttcatttcgagagaggtctccggcaaggggatcctctttccccatttttgtttttgttagcagca 20872350  T
Q  301 gaagg 305  Q
    |||||    
T  20872351 gaagg 20872355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 7 - 323
Target Start/End: Complemental strand, 588486 - 588170
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| ||||||||||| || |||||||| |||  ||| || ||||||||||| |||||||| ||||||||||| || || |||||||| |    
T  588486 gatggtattctgatagcaaatgaattggtagatgatgcgaagcgtaataataaagagttacttatgtttaaggtggattttgagaaggcgtatgattcgg 588387  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||| | ||  | |||||||| |||  ||| ||||| |||||| || | ||||| |||||||||||||| ||||| |||||||| ||  |||| ||    
T  588386 tggattggaggtatttagatgaggtgatggctaaaatgaattttccgcgtctatggcgttcttggattatggagtgtgtcacaacggctacaacatcagt 588287  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    ||||||||||||||||||||||||||||||| || | || ||||| || || ||||||||||| ||||| |||||||||||| | ||||| ||||||||     
T  588286 gttagttaatgggtgtccgactgatgagtttcattttgaaagaggacttcgccaaggggatcctctttccccgtttttgtttttgttagctgctgaaggc 588187  T
Q  307 ttaaatgtgatgatgtc 323  Q
     | ||||||||||||||    
T  588186 cttaatgtgatgatgtc 588170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 12123288 - 12122968
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| ||||| ||||| || ||||||||||||  |||  | |||||| |||| ||||||||||||||||||||||| |  |||||||| |    
T  12123288 gatggtattctgatagcaaaggaattggttgatgatgcaaagcgtaatgataaagagctacttatgtttaaagtggattttgaaaaggtgtatgattcgg 12123189  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||| | ||| | |||||||| |||  ||| ||| | ||||||  | | ||||| |||||||||||||| || ||||||||||| || || || ||    
T  12123188 tggattggaggtacttagatgaggtgatgggtaaaatgtattttccgcatatgtggcgttcttggattatggagtgcgttacaacggctacagcttccgt 12123089  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    | |||| ||||| |||||| ||||||||||| || | || || || ||||||||||||||||| ||||| |||||| ||||||| ||||| ||||||||     
T  12123088 gctagtgaatggttgtccggctgatgagtttcattttgaaagtggactccgtcaaggggatcctctttccccgtttctgtttctgttagctgctgaagga 12122989  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     | |||||||||||| |||||    
T  12122988 cttaatgtgatgatgactgcg 12122968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 37074110 - 37074430
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| || |||||| | || |||||||| |||  |||  | |||||| |||| ||||||||||||||||||||||| || ||||| || |    
T  37074110 gatggtattctgatagctaatgaagttgtagatgatgcgaagtgtaatgataaagagctacttatgtttaaagtggattttgaaaaggcttatgactcgg 37074209  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||||||||| | |||||||| ||||| || ||||| ||||||  |   ||||||| |||||||||||| ||||||||||| || || || || ||    
T  37074210 tggattggggttacttagatgaggtgatgatcaaaatgaattttccgactaagtggcggtgttggattatggagtgtgttacaactgctacagcttcagt 37074309  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    |||||| ||||| ||  |||| ||||||||| || | || ||||| || |||||||||||||| ||||| || ||| ||||||| ||||| |||||||||    
T  37074310 gttagtgaatggttgctcgaccgatgagtttcattttgaaagaggactacgtcaaggggatcctctttccccttttctgtttctgttagctgctgaaggt 37074409  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     |  |||||||||||||||||    
T  37074410 cttgatgtgatgatgtctgcg 37074430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 17722172 - 17722108
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||  ||||||| ||||||    
T  17722172 tgtttaaagtggattttgaaaaggcgtatgattctgttgattgggggtatcttgatgaagttatg 17722108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 29969511 - 29969447
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||||||||||||||| || | |||||||||||||||||| ||| ||||||||||||||    
T  29969511 tgttcaaagtggattttgaaaaggcgtttgattctgttgattgggggtaccttgatgaggttatg 29969447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 8772379 - 8772337
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggg 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  8772379 tttaaagtggattttgaaaaagcctatgattctgttgactggg 8772337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 45460849 - 45460785
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||||||||| |||||||||||||| ||||| || ||||||||||| ||  ||||||||||||||    
T  45460849 tgtttaaagtagattttgaaaaagcgtatgactcggttgattggggatatcttgatgaggttatg 45460785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 18768938 - 18768896
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggg 115  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  18768938 tttaaagtggattttgaaaaagtctatgattctgttgactggg 18768896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 27278711 - 27278626
Alignment:
Q  14 ttttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    ||||||| |||||||||||||| |||||||| |||  |||||||||| | ||||| |||||||| || |||||||| ||||| ||||    
T  27278711 ttttgatagcaaatgaattagttgatgatgcgaagtgtaaaaagaaatatttacttatgtttaaggt-gattttgagaaagcatatg 27278626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 24820562 - 24820494
Alignment:
Q  253 ctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatg 321  Q
    ||||||||||||||||| ||||| |||||| |||||||  |||| ||||||||  | ||||||||||||    
T  24820562 ctccgtcaaggggatcctctttccccgtttctgtttctgctagcggctgaaggccttaatgtgatgatg 24820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 34233239 - 34233190
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||| || ||||||||||||||||||||||| ||||| || ||||||||    
T  34233239 atgttcaaggtggattttgaaaaagcctatgactctgtcgactggggtta 34233190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 37938952 - 37938989
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttga 110  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  37938952 tttaaagtggattttgaaaaagcttatgattttgttga 37938989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 48779500 - 48779403
Alignment:
Q  211 gttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggttt 308  Q
    ||||| || ||||||||||||||||||||| | ||||| || || ||||||||||| || ||||| || ||| | ||| | || ||||| ||||||||    
T  48779500 gttaacggatgtccgactgatgagtttaatgttgagaggggccttcgtcaaggggaccctctttcgccatttctatttttattggcagccgaaggttt 48779403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 13637314 - 13637266
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||| ||||    
T  13637314 tgtttaaagtggattttgggaaaccctatgattcagttgattggtgtta 13637266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 34207867 - 34207803
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    ||||||||||||||||||||||||| | ||| || |||||||||  |||  ||||||| ||||||    
T  34207867 tgtttaaagtggattttgaaaaagcgtttgactcggttgattggaattatcttgatgatgttatg 34207803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 329; Significance: 0; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 29326906 - 29326494
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29326906 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggtaaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcttatg 29326807  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  29326806 attctgttgattggggctacattgatgaggttatgattaagatgaattttccgtgtgtttggcggtcttggattatggaatgtattactacggcgacggc 29326707  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    || |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29326706 atttgtgttagttaatgggtgtccgactgatgagtttaatctcgaaaggggtctccgtcaaggggatccgctttctccgtttttgttccttttagcagct 29326607  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    ||||||| |||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||  |||| ||||||| |||| ||||| |||||||    
T  29326606 gaaggttcaaatgtgatgatgtctgcgttggtaacgacttggttgttcactccatatgctattggggcacaagctaatgtgctggtttctcacttgcagt 29326507  T
Q  401 ttgcagatgatac 413  Q
    ||| |||||||||    
T  29326506 ttgtagatgatac 29326494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 166 - 323
Target Start/End: Complemental strand, 11267568 - 11267411
Alignment:
Q  166 tcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaagggg 265  Q
    |||||||||||||||||||||||||| || ||| |||| ||| |||| ||||| |||||||||||||||||| || | |||||||| ||||| |||||||    
T  11267568 tcttggattatggaatgtgttacaacagctacgacatcagtgctagtaaatggttgtccgactgatgagtttcattttgagagaggactccgccaagggg 11267469  T
Q  266 atccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgtc 323  Q
    | || || || || ||||||||||| ||||| || |||||| | ||||| ||||||||    
T  11267468 accctctctccccatttttgtttctgttagctgcggaaggtcttaatgttatgatgtc 11267411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 327
Target Start/End: Original strand, 6677321 - 6677434
Alignment:
Q  214 aatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggtttaaatg 313  Q
    ||||| || ||||| ||||||||| || | || ||||| || |||||||||||||| ||||| || ||| ||||||| ||||| ||||||||| |  |||    
T  6677321 aatggttgcccgaccgatgagtttcattttgaaagaggactacgtcaaggggatcctctttccccttttctgtttctgttagctgctgaaggtcttgatg 6677420  T
Q  314 tgatgatgtctgcg 327  Q
    ||||||||||||||    
T  6677421 tgatgatgtctgcg 6677434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 23239918 - 23239854
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||||||||||| ||| || |||||||||||||||||||| ||| ||||||||||||||    
T  23239918 tgttcaaagtggattttgcaaaggcgtatgattctgttgattgggggtaccttgatgaggttatg 23239854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 36257313 - 36257264
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  36257313 atgtttaaggtggattttgagaaagcgtatgattctgttgattggggtta 36257264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 1822386 - 1822338
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||||||||||||||| || |||||||  ||||||||||||||    
T  1822386 tgtttaaagtggattttgaaaatgcttatgatttagttgattggggtta 1822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 6050777 - 6050729
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||||||||| |||||||| ||||| |||||||||||    
T  6050777 tgtttaaggtggattttgaaaaggcctatgactctgtcgattggggtta 6050729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 19509670 - 19509611
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggtt 132  Q
    |||||||||||||||||||| || |||||||  || |||||||||||  |||||||||||    
T  19509670 tttaaagtggattttgaaaaggcgtatgatttggtcgattggggttatcttgatgaggtt 19509611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 22561406 - 22561452
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| ||||    
T  22561406 tttaaggtggattttgagaaagcctatgattctattgattggcgtta 22561452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 38359002 - 38358960
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggg 115  Q
    |||| ||||||||| |||||||||||||||||| |||||||||    
T  38359002 tttatagtggatttcgaaaaagcctatgattctattgattggg 38358960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 25856042 - 25856115
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatgattaagatg 144  Q
    ||||||||||||||||||| || || ||||| || ||||||||||| ||  |||| ||||||||| ||| ||||    
T  25856042 tgtttaaagtggattttgagaaggcgtatgactcagttgattgggggtatcttgaggaggttatggttaggatg 25856115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 6999606 - 6999654
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||||||||| ||||||||||  || |||||||||||    
T  6999606 tgtttaaggtggattttgaaaaggcctatgattaagtcgattggggtta 6999654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 27164698 - 27164762
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| |||||||| |||||||| || || || |||||||||||||| ||| | ||||||||||||    
T  27164698 tgttcaaagtggactttgaaaaggcttacgactctgttgattgggggtacctagatgaggttatg 27164762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 38 - 442
Target Start/End: Complemental strand, 16665650 - 16665245
Alignment:
Q  38 atgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatgat 137  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  16665650 atgatgcaaaggtcaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcttatgattctgttgattggggctacattgacgaggttatgat 16665551  T
Q  138 taagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagttt 237  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  16665550 taagatgaattttccgtgtgtttggcggtcttggattatggagtgtattacaatggcgatggcatctgtgttagttaatgggtgcccgactgatgagttt 16665451  T
Q  238 aatctcgagagaggtctccgtcaaggggatccgctttctccgttttt-gtttcttttagcagctgaaggtttaaatgtgatgatgtctgcgttggtaacg 336  Q
    ||||| || || ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16665450 aatcttgaaaggggtctccgtcaaggggatccgctttctccatttttggttccttttagcagcagaaggtttaaatgtgatgatgtctgcgttggtaacg 16665351  T
Q  337 tctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagtttgcagatgataccttagtagtaggagttaagtcct 436  Q
      ||||||||||||||| |||||| | |||| ||||| ||||||| |||| ||||| |||||||||||||||||||| ||| |||||||||||||||| |    
T  16665350 aatgggttgttcactccatatgctgtcggggcgcaagctaatgtgctggtttctcacttgcagtttgcagatgatacattactagtaggagttaagtctt 16665251  T
Q  437 gggcaa 442  Q
    ||||||    
T  16665250 gggcaa 16665245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 440
Target Start/End: Complemental strand, 10755771 - 10755332
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||| || |||||||| |||||  ||||||| ||||||||||| ||||| ||||    
T  10755771 attctcgatggtatcttgattgcaaatgaattagttgatgatgcaaaggtcaagaagaaagatttacttttgtttaaggtggattttgagaaagcttatg 10755672  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    ||| |||||||||||| ||||||||||| ||||||  ||||||||| |||| | ||||||||||||| ||||||||||| ||| |||||||||| ||| |    
T  10755671 attttgttgattgggggtacattgatgaagttatgtgtaagatgaattttctgagtgtttggcggtcctggattatggagtgtattacaacggcaacgac 10755572  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||| ||||||||||||||||||||||| |||||||||| ||| || || |||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  10755571 atcagtgttagttaatgggtgtccgacagatgagtttactcttgaaaggggtctccggcaaggggatccgctttcaccgtttttgttccttttagcagct 10755472  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    |||||| | |||||||||||| | || ||||| |||  |||| |||| ||||| |||| | | |||| ||| || ||||||||||| ||||| ||||| |    
T  10755471 gaaggtctcaatgtgatgatgacagcattggttacgaatgggatgtttactccatatggtgtaggggcgcaggacaatgtgttggtatctcacttgcaat 10755372  T
Q  401 ttgcagatgataccttagtagtaggagttaagtcctgggc 440  Q
    |||||||||| || ||| |||||||||| ||||| |||||    
T  10755371 ttgcagatgacacattactagtaggagtcaagtcatgggc 10755332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 17152330 - 17152650
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| |||||||||||||| |||||||| |||  |||  | ||||||||||| ||||||||||||||||||||||| || |||||||| |    
T  17152330 gatggtattctgatagcaaatgaattagtagatgatgcgaagcgtaatgataaagagttacttatgtttaaagtggattttgaaaaggcgtatgattcgg 17152429  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||||| ||| | ||||||||  ||||||| ||||| ||||||  |   ||||| |||||||||||||| ||||||||||| || || ||||| ||    
T  17152430 tggattggggatacttagatgaggtgttgattaaaatgaattttccgcctaagtggcgttcttggattatggagtgtgttacaactgctacagcatcagt 17152529  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    |||||| ||||| |||||||| ||||||||| || | || ||||| |||| |||||||||||| ||||| || ||| ||||| | ||||| ||||||||     
T  17152530 gttagtgaatggttgtccgaccgatgagtttcattttgaaagaggactccttcaaggggatcccctttccccttttctgtttgtattagctgctgaaggc 17152629  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     | ||||||||||||||||||    
T  17152630 cttaatgtgatgatgtctgcg 17152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 3516386 - 3516066
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| ||||| ||||| || ||||||||||||  |||  | ||||||||||| ||||||||||||||||||||||| || |||||||| |    
T  3516386 gatggtattctgatagcaaacgaattggttgatgatgcaaagcgtaatgataaagagttacttatgtttaaagtggattttgaaaaggcatatgattcgg 3516287  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | || ||| | ||| | ||||||||  ||  ||| |||   ||||||| |   ||||| |||||||||||||| || ||||||||||| || || |||||    
T  3516286 tggactggaggtacttagatgaggtgttgggtaaaatgtgttttccgtataagtggcgttcttggattatggagtgcgttacaacggctacagcttctgt 3516187  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    | |||| ||||| |||||||||||||||||| || | || ||||| || |||||||||||||| ||||| |||||| ||||||| ||||| ||||||||     
T  3516186 gctagtgaatggctgtccgactgatgagtttcattttgaaagaggacttcgtcaaggggatcctctttccccgtttctgtttctgttagctgctgaaggc 3516087  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     | |||||||||||| |||||    
T  3516086 cttaatgtgatgatgactgcg 3516066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 82 - 323
Target Start/End: Complemental strand, 8596884 - 8596643
Alignment:
Q  82 gattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaat 181  Q
    |||||||||||||| |||||||| ||||||||| ||||  | |||||||| |||||||| ||||| ||||||    | ||||| |||||||||||||| |    
T  8596884 gattttgaaaaagcatatgattccgttgattggagttatttagatgaggtgatgattaaaatgaattttccgcaattgtggcgctcttggattatggagt 8596785  T
Q  182 gtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtt 281  Q
    ||||||||||||| ||| |||| || ||||||||||| |||||||| ||||||||  || | |||||||| || |||||||||||||| ||||| |||||    
T  8596784 gtgttacaacggctacgacatcagttttagttaatggttgtccgacagatgagttccattttgagagaggccttcgtcaaggggatcctctttccccgtt 8596685  T
Q  282 tttgtttcttttagcagctgaaggtttaaatgtgatgatgtc 323  Q
    ||||||  | |||||||| |||||| | ||||| ||||||||    
T  8596684 tttgttcttgttagcagcagaaggtcttaatgtaatgatgtc 8596643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 166 - 353
Target Start/End: Complemental strand, 30738064 - 30737877
Alignment:
Q  166 tcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaagggg 265  Q
    |||||||||||||| |||||||||||||| ||| |    |||||||||||||| ||||||| ||||||||||||  | |||||||||||||||| | |||    
T  30738064 tcttggattatggagtgtgttacaacggcaacgacggtagtgttagttaatggatgtccgattgatgagtttaactttgagagaggtctccgtccaaggg 30737965  T
Q  266 atccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactcc 353  Q
    |||| |||||||||||||||||| | ||||| || |||||  | |||||||||||||| ||| |||| |||  ||||||||| |||||    
T  30737964 atcctctttctccgtttttgtttttgttagctgccgaaggccttaatgtgatgatgtcagcgatggtgacgagtgggttgtttactcc 30737877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 237
Target Start/End: Original strand, 9827236 - 9827466
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| |||||||||||||| |||||||| |||  |||  | ||||||||||| ||||||||||||||||||||||| || ||||| || |    
T  9827236 gatggtattctgatagcaaatgaattagtagatgatgcgaagcgtaatgataaagagttacttatgtttaaagtggattttgaaaaggcgtatgactcgg 9827335  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||||||||| | |||||||| || ||||| ||||| |||||   |   |||||   |||||||||||| ||||||||||| || || ||||| ||    
T  9827336 tggattggggttacttagatgaggtgataattaaaatgaattttccaactaagtggcgtggttggattatggagtgtgttacaactgctacagcatcagt 9827435  T
Q  207 gttagttaatgggtgtccgactgatgagttt 237  Q
    |||||| ||||| |||| ||| |||||||||    
T  9827436 gttagtgaatggttgtctgaccgatgagttt 9827466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 23823396 - 23823194
Alignment:
Q  25 aatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattg 124  Q
    |||||||| || |||||||| |||  ||| || ||||||||||| |||||||||||||| ||||||||||| ||||| || || |||||| | ||| | |    
T  23823396 aatgaattggtagatgatgcgaagtgtaataataaagagttacttatgtttaaagtggactttgaaaaagcttatgactccgtggattggaggtacttgg 23823297  T
Q  125 atgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtcc 224  Q
    | ||||| |||||||| ||||| ||||||    | ||||| |||||||||||||| ||||| |||||||| ||| ||||||| ||||| ||||| |||||    
T  23823296 aagaggtgatgattaaaatgaattttccgcacctgtggcgctcttggattatggagtgtgtcacaacggcaacgacatctgttttagtaaatggttgtcc 23823197  T
Q  225 gac 227  Q
    |||    
T  23823196 gac 23823194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 168 - 327
Target Start/End: Complemental strand, 9820601 - 9820442
Alignment:
Q  168 ttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggat 267  Q
    |||||||||||| ||||||||||| || || ||||| |||||||| ||||| |||||||| ||||||||| || | || ||||  |||||||||||||||    
T  9820601 ttggattatggagtgtgttacaactgcaacagcatcagtgttagtgaatggttgtccgaccgatgagtttcattttgaaagagaactccgtcaaggggat 9820502  T
Q  268 ccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgtctgcg 327  Q
    || ||||| || ||||||||| | ||||| ||||||||  |  |||||||||||||||||    
T  9820501 cctctttccccttttttgtttgtgttagctgctgaaggccttgatgtgatgatgtctgcg 9820442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16672117 - 16672075
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatg 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16672117 attcttgatggtattttgattgcaaatgaattagtcgatgatg 16672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 8131511 - 8131462
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  8131511 atgtttaaagtggattttgagaaagcgtatgattctgttgattagggtta 8131462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 16185849 - 16185784
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||||||||| ||| |||||||| || ||||| |||||||| ||||| ||| ||||||||||||||    
T  16185849 atgtttaaagcggactttgaaaaggcgtatgactctgttgagtgggggtaccttgatgaggttatg 16185784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 21739097 - 21739158
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggtt 132  Q
    |||||||||||||||||||||| || || ||||| ||  ||||||||||| |||||||||||    
T  21739097 tgtttaaagtggattttgaaaaggcgtacgattcggtcaattggggttaccttgatgaggtt 21739158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 30165926 - 30165974
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| || |||||||||||||| ||||||||| |||||||||||||    
T  30165926 tgtttaaggtcgattttgaaaaagcatatgattctattgattggggtta 30165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 19918835 - 19918880
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    |||| ||||||||||||||||| || ||||||||||| ||||||||    
T  19918835 tgttcaaagtggattttgaaaaggcgtatgattctgtagattgggg 19918880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 52906630 - 52906679
Alignment:
Q  55 aagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattc 104  Q
    |||||||| |||||| |||| |||||||||||||| ||||| ||||||||    
T  52906630 aagaaagaattactcttgttcaaagtggattttgagaaagcttatgattc 52906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 2365815 - 2365755
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggt 131  Q
    |||| ||||| ||||||||||| || |||||||| || |||||||| ||| ||||||||||    
T  2365815 tgttcaaagtagattttgaaaaggcgtatgattcggtagattgggggtaccttgatgaggt 2365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 12333691 - 12333755
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||||||||||||||||||||| || ||||| || ||||| ||||| ||  |||| |||||||||    
T  12333691 tgtttaaagtggattttgaaaaggcgtatgactcagttgactgggggtatcttgaggaggttatg 12333755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 12953955 - 12953887
Alignment:
Q  169 tggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagttt 237  Q
    |||||| | |||||||||  |||||| ||||||||  ||||||| |||||||||||||  |||||||||    
T  12953955 tggatttttgaatgtgttggaacggcaacggcatcgatgttagtgaatgggtgtccgatagatgagttt 12953887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 5390031 - 5390472
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||    
T  5390031 attcttgatggtattttgattgcaaatgaattagtcgatgatgctaaggttaaaaaaaaatagttactcatgtttaaggtggattttgaaaaagcttatg 5390130  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||| ||| | |||||||| |||||    
T  5390131 attctgttgattggggttatattgatgaggttatgattaagatgaattttttgtgtgtttagcggtcttggattatggagtgtataacaacggcaacggc 5390230  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||||||||||||||||||||| |||||| |||||||||  || || || || ||||||||||||||||||||||||||||||||||| || ||||| ||     
T  5390231 atctgtgttagttaatgggtgcccgactaatgagtttatccttgaaaggggcctccgtcaaggggatccgctttctccgtttttgttcctattagctgca 5390330  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    |||||||||||||||||||||||||| |||||| |   |||||||||||||||||||||| | |||| || || ||||||| |||||||||| |||||||    
T  5390331 gaaggtttaaatgtgatgatgtctgcattggtatctagtgggttgttcactccttatgctgtcggggagccagctaatgtgctggtgtctcacttgcagt 5390430  T
Q  401 ttgcagatgataccttagtagtaggagttaagtcctgggcaa 442  Q
    ||||||||||||| ||| |||| ||||||||||| |||||||    
T  5390431 ttgcagatgatactttattagtcggagttaagtcttgggcaa 5390472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 18293915 - 18294235
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| ||||| ||||| || ||||||||||||  |||  | |||||| |||| ||||||||||||||||||||||| || |||||||| |    
T  18293915 gatggtattctgatagcaaacgaattggttgatgatgcaaagcgtaatgataaagagctacttatgtttaaagtggattttgaaaaggcgtatgattcgg 18294014  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||| | ||| | | |||||| |||  ||| ||| | |||||| || | ||||| |||||||||||||| || ||||||||||| || || |||||    
T  18294015 tggattggaggtacttaggtgaggtgatgggtaaaatgtattttccgcgtatgtggcgttcttggattatggagtgcgttacaacggctacagcttctgt 18294114  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    | |||| ||||| ||||| |||||||||||| || | || ||||| || |||||||||||||| ||||| || ||| | ||| | ||||| ||||||||     
T  18294115 gctagtgaatggttgtccaactgatgagttttattttgaaagaggacttcgtcaaggggatcctctttccccttttctatttttgttagctgctgaaggc 18294214  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     | ||||||| |||| |||||    
T  18294215 cttaatgtgacgatgactgcg 18294235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 2895906 - 2895585
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcc-tatgattct 105  Q
    ||||||||| |||| ||||||||||| || |||||||||||   |||  | |||||| |||| ||||| |||||||| |||||||||| | || ||||      
T  2895906 gatggtattctgatagcaaatgaattggtagatgatgcaaaacataatgataaagagctacttatgttcaaagtggactttgaaaaaggcgtacgatttg 2895807  T
Q  106 gttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctg 205  Q
    || |||||| | ||| | ||||| || |||  ||| |||   |||||| || | ||| | |||||||||||||| || |||||||| || || || || |    
T  2895806 gtggattggaggtacttagatgaagtgatggataaaatgttatttccgcgtctgtggtgctcttggattatggagtgcgttacaactgctacagcttcag 2895707  T
Q  206 tgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaagg 305  Q
    |  |||| ||||| || ||||||||||||||| || | || ||||| ||||||||||||||||| || ||||||||| |||||||  |||| ||||||||    
T  2895706 tactagtgaatggttgcccgactgatgagtttcattttgaaagaggactccgtcaaggggatcctctatctccgtttctgtttctgctagcggctgaagg 2895607  T
Q  306 tttaaatgtgatgatgtctgcg 327  Q
      | || |||||||||||||||    
T  2895606 ccttaacgtgatgatgtctgcg 2895585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 2555141 - 2555077
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| |||||||||||||||||||  ||||||| |||||||||||| ||| ||||||||||||||    
T  2555141 tgttcaaagtggattttgaaaaagtgtatgattatgttgattgggggtaccttgatgaggttatg 2555077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 11059465 - 11059513
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  11059465 tgtttaaggtggattttgaaaaggcctatgattctgtcgattggggtta 11059513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 12150236 - 12150325
Alignment:
Q  225 gactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgt 314  Q
    |||||||||||||| | | |||||||| || |||||||| ||||| |||||||  ||| | ||||| ||||| | |||||||||||||||    
T  12150236 gactgatgagtttattttggagagagggcttcgtcaaggtgatcctctttctcgttttctttttctattagctgttgaaggtttaaatgt 12150325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 13087080 - 13087019
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggtt 132  Q
    |||||||||| ||||||||||| || || ||||| |||||||||| |||| |||||||||||    
T  13087080 tgtttaaagtagattttgaaaaggcttacgattccgttgattgggattaccttgatgaggtt 13087019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 21550381 - 21550344
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttga 110  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21550381 tttaaagtggattttgaaaaagcatatgattctgttga 21550344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 1307270 - 1307334
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    ||||||||||||||||||||||||| | ||| || |||||||||| |||  ||||||| ||||||    
T  1307270 tgtttaaagtggattttgaaaaagcgtttgactcggttgattgggattatcttgatgatgttatg 1307334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 17604937 - 17605001
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||||||||||||||||||||| |  ||||| || ||||||||||| ||  |||| |||||||||    
T  17604937 tgtttaaagtggattttgaaaaggtgtatgactcagttgattgggggtatcttgaggaggttatg 17605001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 208; Significance: 1e-113; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 101 - 442
Target Start/End: Complemental strand, 36952806 - 36952468
Alignment:
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| |    
T  36952806 attctgttgattggggctacattgatgaggttatgattaagatgaattttccgtgtgtttggcggtcttggattatggagtgtattacaacggcgacgac 36952707  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |  |||||||||||||||||||||| ||||| ||||||||| |||||||||||     
T  36952706 atctgtgttagttaatgggtgcccgactgatgagtttaatcttgaaaagggtctccgtcaaggggatccgcattctctgtttttgttccttttagcagca 36952607  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggtaacgtctgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagt 400  Q
    ||| ||||||||||   ||||||||||||||||| |   |||||||||||||| |||||||| |||| ||||| ||||||| |||| ||||| |||||||    
T  36952606 gaaagtttaaatgt---gatgtctgcgttggtaatgagagggttgttcactccatatgctatcggggcgcaagttaatgtgctggtttctcacttgcagt 36952510  T
Q  401 ttgcagatgataccttagtagtaggagttaagtcctgggcaa 442  Q
    |||| |||||||| ||| |||||||||||||||| |||||||    
T  36952509 ttgccgatgatactttactagtaggagttaagtcttgggcaa 36952468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 23156670 - 23156990
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||| ||| |||| ||||||||||| || ||||||||||||  |||  | |||||| |||| ||||||||||||||||||||||| || |||||||| |    
T  23156670 gatgggattctgatagcaaatgaattggtagatgatgcaaagcgtaatgataaagagctacttatgtttaaagtggattttgaaaaggcgtatgattcgg 23156769  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||||| ||| | |||||||| |||  ||| ||||| |||||| || | ||||| |||||||||||||| || ||| ||||||| || || || ||    
T  23156770 tggattgggggtacttagatgaggtgatgggtaaaatgaattttccgcgtatgtggcgttcttggattatggagtgcgttgcaacggctacagcttccgt 23156869  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    | |||| ||||| |||||||||||||||||| || | || ||||  ||||||||||||||||| ||||| || ||| ||||||| ||||| | ||||||     
T  23156870 gctagtgaatggttgtccgactgatgagtttcattttgaaagagaactccgtcaaggggatcctctttccccttttctgtttctgttagctgttgaaggc 23156969  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     | |||||||||||| |||||    
T  23156970 cttaatgtgatgatgactgcg 23156990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 15647587 - 15647907
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||| |||| || |||||| |||| ||||||||||||  |||  | |||||| |||| ||||||||||||||||||||||| || ||||| || |    
T  15647587 gatggtattctgatagctaatgaagtagtagatgatgcaaagtgtaatgataaagagctacttatgtttaaagtggattttgaaaaggcttatgactcgg 15647686  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||| ||||| | |||||||| |||||||| ||||| ||||||| |   ||||| | |||||||||||| |||||||| || || || ||||||||    
T  15647687 tggattggtgttacttagatgaggtgatgattaaaatgaattttccgtctaagtggcgttgttggattatggagtgtgttaccactgctacagcatctgt 15647786  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    |||||| ||||| ||||| || ||||||||| || | || ||||| || |||||||||||||| ||||| || ||| | ||||| || || || ||||||    
T  15647787 gttagtgaatggttgtccaaccgatgagtttcattttgaaagaggacttcgtcaaggggatcctctttccccttttctatttctctttgctgccgaaggt 15647886  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     |  |||||||||||||||||    
T  15647887 cttgatgtgatgatgtctgcg 15647907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 25 - 323
Target Start/End: Original strand, 17825319 - 17825617
Alignment:
Q  25 aatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattg 124  Q
    |||||||| || |||||||| |||  ||| || ||||||||||| |||||||||||||||||||||||||  |||||||| || |||| | | ||| | |    
T  17825319 aatgaattggtagatgatgcgaagtgtaataataaagagttacttatgtttaaagtggattttgaaaaagtgtatgattccgtggatttgaggtacttag 17825418  T
Q  125 atgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtcc 224  Q
    ||||||| ||| |||| ||||| ||| ||    | ||| | |||||||||||||| ||| |||||||||| || ||||| || ||||| ||||| |||||    
T  17825419 atgaggtgatggttaaaatgaatttttcgcacctgtggtgctcttggattatggagtgtattacaacggctacagcatcagtattagtaaatggttgtcc 17825518  T
Q  225 gactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgtc 323  Q
    |||  |||||||  || | |||||||| || ||||||||||| || ||||| || ||||||||| | ||||| ||||||||| | ||||||||||||||    
T  17825519 gacaaatgagttccattttgagagaggccttcgtcaaggggaccctctttccccatttttgtttttgttagctgctgaaggtcttaatgtgatgatgtc 17825617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 25136718 - 25136461
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    ||||||||||||||||| ||||| ||||| |||||||| ||    || ||| |||||||||| |||||||| ||||||||||| ||||| |||||  |||    
T  25136718 gatggtattttgattgctaatgagttagttgatgatgcgaaaaaaaataaggaagagttacttatgtttaaggtggattttgagaaagcttatgacactg 25136619  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||||||||   ||||||||| ||| |||| || || ||| |  |  | ||| | |||||||| ||||| |||||||||||||| | | |||  ||    
T  25136618 tcgattggggttatcatgatgaggtgatggttaaaataaatttttcaagattgtggtgatcttggatcatggagtgtgttacaacggcaaagacattggt 25136519  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggg 264  Q
    ||| |||||||| || |||||||||||||||| | | |||||||| ||||||||||||    
T  25136518 gttggttaatggatgcccgactgatgagtttagttttgagagagggctccgtcaaggg 25136461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 1827144 - 1827208
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| ||  ||||||||||||||    
T  1827144 tgttcaaagtggattttgaaaaagcgtatgattttgttgattgggggtaacttgatgaggttatg 1827208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 7661911 - 7661959
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||||    
T  7661911 tgtttaaggtcgattttgaaaaagcgtatgattctgttgattggggtta 7661959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 20397102 - 20397054
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  20397102 tgtttaaggtggattttgaaaaggcctaggattctgttgattggggtta 20397054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 47420341 - 47420281
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggt 131  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||| ||| ||||||||||    
T  47420341 tgttcaaagtggattttgaaaaggcgtatgattcggttgattgggggtaccttgatgaggt 47420281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 26695463 - 26695420
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  26695463 tttaaagtggattttgaaaaagcatatgattctgttgactgggg 26695420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 19161772 - 19161821
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||||||||||||| ||||| || ||||| ||||||||||||||    
T  19161772 atgtttaaagtggattttgagaaagcgtacgattcggttgattggggtta 19161821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 40689605 - 40689556
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  40689605 atgtttaaggtggattttgagaaagcgtacgattctgttgattggggtta 40689556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 137514 - 137430
Alignment:
Q  221 gtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaagg 305  Q
    ||||||| || |||||| || ||||||| || ||||||||||||||||| ||||| || ||||| ||| | || |||||||||||    
T  137514 gtccgacagaggagtttcatatcgagagggggctccgtcaaggggatcccctttccccttttttatttatgttggcagctgaagg 137430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 29552404 - 29552452
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||||||||||||||| || ||||| || ||||||||||||||    
T  29552404 tgtttaaagtggattttgaaaaggcatatgactcggttgattggggtta 29552452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 10561928 - 10561976
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| |||||||| ||||| |||||||| ||||| |||||||||||    
T  10561928 tgtttaaggtggatttcgaaaaggcctatgactctgtcgattggggtta 10561976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 23280340 - 23280292
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| || |||||||| ||||||| ||||| |||||||||||||||    
T  23280340 tgtttaaggtagattttgagaaagcctgtgattatgttgattggggtta 23280292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 28049441 - 28049517
Alignment:
Q  211 gttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtt 287  Q
    |||||||||||||||||||| ||||||  | || |||| || || ||||||||||||||  | || |||||||||||    
T  28049441 gttaatgggtgtccgactgaggagtttcctatccagaggggacttcgtcaaggggatcctttgtcgccgtttttgtt 28049517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 25 - 323
Target Start/End: Complemental strand, 49371451 - 49371153
Alignment:
Q  25 aatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattg 124  Q
    |||||||| || |||||||| |||  ||| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||||| | ||| | |    
T  49371451 aatgaattggtagatgatgcgaagtgtaataataaagagttacttatgtttaaagtggattttgaaaaagcatatgattccgtggattggaggtacttag 49371352  T
Q  125 atgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtcc 224  Q
    ||||||| |||||||| ||||| ||||||  | | ||||| |||||||||||||| ||||||||| |||| |||||||| || ||||| ||||| |||||    
T  49371351 atgaggtgatgattaaaatgaattttccgcatctgtggcgctcttggattatggagtgtgttacagcggctacggcatcagttttagtaaatggttgtcc 49371252  T
Q  225 gactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgtc 323  Q
    ||| ||||||||  || | |||||||| ||||||||||||||||| ||||  |||||||||||| | ||||| | ||||||| | ||||| ||||||||    
T  49371251 gacagatgagttccattttgagagaggcctccgtcaaggggatcctcttttcccgtttttgtttttgttagctgttgaaggtcttaatgtaatgatgtc 49371153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 26997667 - 26997337
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatg 100  Q
    ||||| |||| |||||||||||| || || ||||| |||||||| ||    || ||||||||| |||| |||||||| |||| |||||| || ||||| |    
T  26997667 attctggatgctattttgattgctaacgagttagttgatgatgcgaaaaa-aataagaaagagctacttatgtttaaggtgggttttgagaaggcctacg 26997569  T
Q  101 attctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggc 200  Q
    | |||||||||||||| ||  |||| ||||| |||  ||| ||||| |||||   | | |||   || ||||| |||||  ||||| | ||||| ||| |    
T  26997568 actctgttgattgggggtatcttgacgaggtgatgggtaaaatgaattttccacctttgtggtaatcgtggataatggagcgtgtttcgacggcaacgac 26997469  T
Q  201 atctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagct 300  Q
    ||| ||| | ||||||||||| |||||||||||||| |   | |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||     
T  26997468 atcggtgctggttaatgggtgcccgactgatgagttcaggtttgagagaggtctccgacaaggggatccgctttctccttttttgtttctattagcggcg 26997369  T
Q  301 gaaggtttaaatgtgatgatgtctgcgttggt 332  Q
    || || |||||||| |||||||| ||||||||    
T  26997368 gagggcttaaatgtaatgatgtcagcgttggt 26997337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 39431823 - 39431758
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatga 136  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||| |||||||||||||||    
T  39431823 tgtttaaagtggattttgaaaaggcttatgactctgttgattggggttaccttgatgaggttatga 39431758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 20797197 - 20797132
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatga 136  Q
    |||||||||||||||||||||| || || || |||||||||||||||||| |||||||||||||||    
T  20797197 tgtttaaagtggattttgaaaaggcttacgactctgttgattggggttaccttgatgaggttatga 20797132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 35542571 - 35542507
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||||||||||||||| || | |||||||||||||||||| ||  ||||||||||||||    
T  35542571 tgttcaaagtggattttgaaaaggcgtttgattctgttgattgggggtatcttgatgaggttatg 35542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 32643408 - 32643360
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||||| || |||||||||||||| |||||||| ||||||||||||||    
T  32643408 tgtttaaggttgattttgaaaaagcgtatgattcagttgattggggtta 32643360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 17132112 - 17132174
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    ||||||||  |||| |||||||| ||||||| ||||||||| |||||| | ||||||||||||    
T  17132112 tttaaagtcaatttcgaaaaagcatatgattttgttgattgaggttacttggatgaggttatg 17132174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 14342622 - 14342581
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattgg 114  Q
    ||||||||||||||||||||||| |||||||| ||| |||||    
T  14342622 tttaaagtggattttgaaaaagcttatgattcagttcattgg 14342581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 19043676 - 19043627
Alignment:
Q  55 aagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattc 104  Q
    |||||||| |||||| |||| |||||||||||||| ||||| ||||||||    
T  19043676 aagaaagaattactcttgttcaaagtggattttgagaaagcttatgattc 19043627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 50816713 - 50816789
Alignment:
Q  214 aatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttct 290  Q
    ||||||||||| || ||||| |||  | | ||||||||||| ||||||||||||||  | ||||||||| |||||||    
T  50816713 aatgggtgtcctacggatgaatttcctatggagagaggtcttcgtcaaggggatcctttgtctccgtttctgtttct 50816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 223227 - 223573
Alignment:
Q  1 attcttgatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaa---gagttactcatgtttaaagtggattttgaaaaagcct 97  Q
    ||||| ||||| ||||| || |||||||||||||| ||||||||||||  |||||| |||   || ||||| |||||||| ||||||||||| ||||| |    
T  223227 attctggatgggattttaatagcaaatgaattagttgatgatgcaaagtgtaaaaaaaaaaaagatttacttatgtttaaggtggattttgagaaagctt 223326  T
Q  98 atgattctg------------ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgt 185  Q
    ||||||| |            |||||||||||||| | || ||||| ||| |||| ||||| |||||  || | ||||| |||||||||||||| |||||    
T  223327 atgattcagcttatgattcagttgattggggttacttagaggaggtgatggttaaaatgaattttccacgtttatggcgatcttggattatggagtgtgt 223426  T
Q  186 tacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttg 285  Q
     |||||||| | | | || |||||||| ||||| ||||| |||||||||||||| || |||||||| || |||||||||||||| |||||||||||||||    
T  223427 cacaacggccatgacttcagtgttagtcaatggatgtcctactgatgagtttaagcttgagagaggccttcgtcaaggggatcctctttctccgtttttg 223526  T
Q  286 tttcttttagcagctgaaggtttaaatgtgatgatgtctgcgttggt 332  Q
    ||||| ||||| |||||||||||  ||||||||||||||||| ||||    
T  223527 tttctgttagctgctgaaggttttcatgtgatgatgtctgcggtggt 223573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 7e-50; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 21966295 - 21965975
Alignment:
Q  7 gatggtattttgattgcaaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctg 106  Q
    |||| |||| |||| || |||||| |||| |||||||| |||  |||  | |||||| |||| ||||||||||||||||||||||| || ||||| || |    
T  21966295 gatgctattctgatagctaatgaagtagtagatgatgcgaagtgtaatgataaagagctacttatgtttaaagtggattttgaaaaggcttatgactcgg 21966196  T
Q  107 ttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgt 206  Q
    | |||||||||||| | |||||||| |||||||| ||||| ||||||  |   ||||| | |||||||||||| ||||||||||| || || ||||| ||    
T  21966195 tggattggggttacttagatgaggtgatgattaaaatgaattttccgactaagtggcgttgttggattatggagtgtgttacaactgctacagcatcagt 21966096  T
Q  207 gttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggt 306  Q
    |||||| ||||| || ||||| ||||||||| || | || |||||||| |||||||||||||| ||||| || ||| ||||||| ||||| ||||||||     
T  21966095 gttagtgaatggttgcccgaccgatgagtttcattttgaaagaggtcttcgtcaaggggatcctctttccccttttctgtttctgttagctgctgaaggc 21965996  T
Q  307 ttaaatgtgatgatgtctgcg 327  Q
     |  |||||||||||||||||    
T  21965995 cttgatgtgatgatgtctgcg 21965975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 9667609 - 9667674
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatga 136  Q
    |||||||||||||||||||||| || || || || ||||||||||||||| |||||||||||||||    
T  9667609 tgtttaaagtggattttgaaaaggcttacgactcagttgattggggttaccttgatgaggttatga 9667674  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 28399155 - 28399197
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggg 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  28399155 tttaaagtggattttgaaaaagcctatgattctgttgactggg 28399197  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 6724255 - 6724304
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  6724255 atgtttaaagtggattttgagaaagcgtacgattctgttgattggggtta 6724304  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 37327058 - 37326982
Alignment:
Q  208 ttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgttttt 284  Q
    ||||| |||||||||||||| |||||||||  | | ||||||||||| ||||||||||| || ||||| ||||||||    
T  37327058 ttagtgaatgggtgtccgacggatgagttttctatagagagaggtcttcgtcaaggggaccctctttcaccgttttt 37326982  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 4221544 - 4221598
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatg 127  Q
    |||||||| |||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  4221544 tttaaagttgattttgaaaaagcatatgaatctgttgactggggttaccttgatg 4221598  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 11230239 - 11230300
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggtt 132  Q
    |||||||||| ||||||||||| || || || || ||||||||||||||| |||||||||||    
T  11230239 tgtttaaagtagattttgaaaaggcttacgactccgttgattggggttaccttgatgaggtt 11230300  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 35489369 - 35489329
Alignment:
Q  76 aaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  35489369 aaagtggattttgaaaaagcatatgactctgttgattgggg 35489329  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 39115623 - 39115669
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    ||||| || |||||||||||||||||||| ||| |||||||||||||    
T  39115623 tttaaggtagattttgaaaaagcctatgactctattgattggggtta 39115669  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 2206424 - 2206473
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||| ||||||||||| ||||| || ||||||||||||| ||||||    
T  2206424 atgtttaaggtggattttgagaaagcgtacgattctgttgattagggtta 2206473  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 10690075 - 10690030
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    ||||||| |||||||| |||||||| |||||||| |||||||||||    
T  10690075 tgtttaaggtggatttcgaaaaagcgtatgattcagttgattgggg 10690030  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 13417197 - 13417148
Alignment:
Q  70 atgtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||||||||||||||||| ||||| ||  ||| |||||||||||||||    
T  13417197 atgtttaaagtggattttgagaaagcgtacaattatgttgattggggtta 13417148  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 3152422 - 3152486
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    ||||||||||||||||||||||||| | ||| || |||||||||  |||  ||||||| ||||||    
T  3152422 tgtttaaagtggattttgaaaaagcgtttgactcggttgattggaattatcttgatgatgttatg 3152486  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 24522167 - 24522099
Alignment:
Q  339 tgggttgttcactccttatgctattggggtgcaagataatgtgttggtgtctcatttgcagtttgcaga 407  Q
    ||||||||| ||||| ||||   |||||| ||| || ||||||||||| ||||| ||||||||||||||    
T  24522167 tgggttgtttactccatatggcgttggggcgcatgacaatgtgttggtatctcacttgcagtttgcaga 24522099  T

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Target: scaffold0032 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 23 - 322
Target Start/End: Original strand, 56937 - 57236
Alignment:
Q  23 caaatgaattagtcgatgatgcaaaggttaaaaagaaagagttactcatgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacat 122  Q
    ||||||||||||| ||| |||| |||  ||| || ||||||||||| |||||||| || |||||||||||||| |||||||| || |||||| | ||| |    
T  56937 caaatgaattagtagataatgcgaagtgtaataataaagagttacttatgtttaaggttgattttgaaaaagcgtatgattccgtggattggagatacct 57036  T
Q  123 tgatgaggttatgattaagatgaactttccgtgtgtttggcggtcttggattatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgt 222  Q
     |||||||| |||  ||| ||||| |||| | || | ||| |  ||| ||||||||| |||||||||| ||| ||| |||| |||||||| ||||| ||     
T  57037 agatgaggtaatggctaaaatgaattttctgcgtctgtggtgcacttcgattatggagtgtgttacaatggctacgacatcagtgttagtaaatggttgc 57136  T
Q  223 ccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgctttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgt 322  Q
    ||||||||||||||| || | |||||||| |||||||||||||| || |||||||||||||||||| | ||||| | ||||||| | |||||||||||||    
T  57137 ccgactgatgagtttcattttgagagaggcctccgtcaaggggaccctctttctccgtttttgtttttgttagctgttgaaggtcttaatgtgatgatgt 57236  T

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Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 4789 - 4725
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatg 135  Q
    |||| ||||||||||||||||| || | |||||||||||||||||| ||| ||||||||||||||    
T  4789 tgttcaaagtggattttgaaaaggcgtttgattctgttgattgggggtaccttgatgaggttatg 4725  T

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Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 332
Target Start/End: Complemental strand, 33176 - 32917
Alignment:
Q  73 tttaaagtggattttgaaaaagcctatgattctgttgattggggttacattgatgaggttatgattaagatgaactttccgtgtgtt-tggcggtcttgg 171  Q
    |||||||| || ||||| || || ||||||| ||| |||||||||||| |||||||||| |||  ||| ||||| |||||| ||||| ||||| ||||||    
T  33176 tttaaagtagactttgagaaggcgtatgattatgtggattggggttaccttgatgaggtgatgtctaaaatgaattttccg-gtgttatggcgctcttgg 33078  T
Q  172 attatggaatgtgttacaacggcgacggcatctgtgttagttaatgggtgtccgactgatgagtttaatctcgagagaggtctccgtcaaggggatccgc 271  Q
    |||||||| ||||| || ||  | ||  | || ||||| ||||||||| | |||||  ||||||||  | |  ||||| |||| |||||||||||||| |    
T  33077 attatggagtgtgtcacgacaacaacaacttcggtgttggttaatgggagcccgacaaatgagttttttttttagagaagtcttcgtcaaggggatcctc 32978  T
Q  272 tttctccgtttttgtttcttttagcagctgaaggtttaaatgtgatgatgtctgcgttggt 332  Q
    | ||||| ||  ||||||| || || || || ||| | ||||| |||||||| || |||||    
T  32977 tctctcctttcctgtttctcttggcggcggagggtcttaatgttatgatgtcggctttggt 32917  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 14269 - 14311
Alignment:
Q  71 tgtttaaagtggattttgaaaaagcctatgattctgttgattg 113  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  14269 tgtttaaagtggattttgaaaaagcttatgattccgttgattg 14311  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 183651 - 183604
Alignment:
Q  72 gtttaaagtggattttgaaaaagcctatgattctgttgattggggtta 119  Q
    |||||| |||||||||||||| |||||||| |||||||| ||||||||    
T  183651 gtttaaggtggattttgaaaaggcctatgagtctgttgactggggtta 183604  T

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Target: scaffold0183 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 20507 - 20465
Alignment:
Q  74 ttaaagtggattttgaaaaagcctatgattctgttgattgggg 116  Q
    |||| |||||||| |||||||||||||||||||| ||||||||    
T  20507 ttaaggtggatttagaaaaagcctatgattctgtggattgggg 20465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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