View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0951_low_17 (Length: 374)

Name: NF0951_low_17
Description: NF0951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0951_low_17
NF0951_low_17
[»] chr4 (39 HSPs)
chr4 (103-345)||(12205831-12206073)
chr4 (15-103)||(43509409-43509497)
chr4 (15-90)||(8063082-8063157)
chr4 (15-90)||(38491763-38491838)
chr4 (15-89)||(31945753-31945827)
chr4 (15-103)||(52122189-52122277)
chr4 (15-90)||(1177497-1177572)
chr4 (15-102)||(39958320-39958407)
chr4 (15-105)||(5324987-5325077)
chr4 (15-104)||(51859313-51859402)
chr4 (15-91)||(40694588-40694664)
chr4 (15-90)||(19739167-19739242)
chr4 (15-90)||(24784989-24785064)
chr4 (15-90)||(24823202-24823277)
chr4 (15-90)||(42472151-42472226)
chr4 (14-90)||(3402559-3402635)
chr4 (15-90)||(42629980-42630055)
chr4 (15-72)||(258627-258684)
chr4 (15-72)||(53324733-53324790)
chr4 (15-89)||(36511456-36511530)
chr4 (8-72)||(10258561-10258625)
chr4 (15-71)||(44521568-44521624)
chr4 (15-85)||(6070911-6070981)
chr4 (52-102)||(14796096-14796146)
chr4 (15-90)||(52573681-52573748)
chr4 (15-72)||(28377557-28377614)
chr4 (15-72)||(46431483-46431540)
chr4 (15-90)||(31227549-31227623)
chr4 (15-91)||(24793238-24793307)
chr4 (15-89)||(3108818-3108884)
chr4 (51-99)||(17892812-17892860)
chr4 (15-83)||(27982452-27982520)
chr4 (15-72)||(7952681-7952738)
chr4 (15-72)||(44121415-44121472)
chr4 (15-72)||(51675305-51675361)
chr4 (15-99)||(25699953-25700037)
chr4 (15-48)||(52721988-52722021)
chr4 (53-89)||(2586891-2586927)
chr4 (51-99)||(36944242-36944290)
[»] chr7 (41 HSPs)
chr7 (15-104)||(1042551-1042640)
chr7 (15-102)||(12103489-12103576)
chr7 (15-102)||(19511212-19511299)
chr7 (15-103)||(40096715-40096803)
chr7 (15-102)||(4292214-4292301)
chr7 (15-90)||(48154567-48154642)
chr7 (15-103)||(9249708-9249796)
chr7 (15-103)||(9283258-9283346)
chr7 (15-103)||(25970137-25970225)
chr7 (15-103)||(26773064-26773152)
chr7 (15-104)||(34122116-34122205)
chr7 (15-104)||(42897448-42897537)
chr7 (15-87)||(554420-554492)
chr7 (15-90)||(27554842-27554917)
chr7 (15-90)||(36413885-36413960)
chr7 (15-90)||(47237731-47237806)
chr7 (15-104)||(26973575-26973664)
chr7 (15-99)||(38065232-38065316)
chr7 (15-90)||(39521622-39521696)
chr7 (15-90)||(21180355-21180430)
chr7 (19-89)||(47718678-47718748)
chr7 (15-72)||(16563758-16563815)
chr7 (15-72)||(16601847-16601904)
chr7 (15-72)||(27397120-27397177)
chr7 (16-72)||(26843574-26843630)
chr7 (15-72)||(8029354-8029411)
chr7 (15-90)||(24956760-24956834)
chr7 (15-103)||(34238622-34238702)
chr7 (15-90)||(48163974-48164041)
chr7 (15-72)||(35160399-35160456)
chr7 (53-89)||(11830777-11830813)
chr7 (26-90)||(23078612-23078676)
chr7 (51-90)||(16851386-16851425)
chr7 (15-90)||(21409903-21409970)
chr7 (15-85)||(36661518-36661580)
chr7 (125-224)||(11705128-11705227)
chr7 (51-90)||(27354516-27354555)
chr7 (52-103)||(36757513-36757564)
chr7 (52-103)||(36767037-36767088)
chr7 (15-72)||(29188853-29188910)
chr7 (15-72)||(35136544-35136601)
[»] chr1 (37 HSPs)
chr1 (15-101)||(37346330-37346416)
chr1 (15-104)||(6915835-6915924)
chr1 (15-104)||(36363036-36363125)
chr1 (15-103)||(38331495-38331583)
chr1 (15-102)||(3427903-3427990)
chr1 (15-90)||(28948191-28948266)
chr1 (15-90)||(52894688-52894763)
chr1 (15-90)||(8133225-8133300)
chr1 (15-90)||(37104696-37104771)
chr1 (15-103)||(30324763-30324851)
chr1 (15-89)||(10822911-10822985)
chr1 (15-102)||(20409084-20409171)
chr1 (15-90)||(25257659-25257734)
chr1 (15-72)||(13012391-13012448)
chr1 (15-99)||(29862318-29862402)
chr1 (15-90)||(34431943-34432018)
chr1 (15-89)||(9782162-9782236)
chr1 (15-72)||(31652818-31652875)
chr1 (15-90)||(29168465-29168540)
chr1 (15-89)||(32380585-32380659)
chr1 (15-72)||(4027369-4027426)
chr1 (15-72)||(38218881-38218938)
chr1 (16-72)||(5985234-5985292)
chr1 (15-90)||(33040896-33040971)
chr1 (15-99)||(34096073-34096152)
chr1 (15-90)||(2472246-2472320)
chr1 (52-90)||(1037062-1037100)
chr1 (52-90)||(1043968-1044006)
chr1 (15-89)||(2364894-2364968)
chr1 (15-90)||(43190306-43190373)
chr1 (15-72)||(3703829-3703886)
chr1 (15-72)||(10764153-10764210)
chr1 (15-72)||(28658404-28658461)
chr1 (63-102)||(38949231-38949270)
chr1 (15-48)||(14334815-14334848)
chr1 (15-48)||(36551922-36551955)
chr1 (62-102)||(24852080-24852120)
[»] chr5 (38 HSPs)
chr5 (15-104)||(10657504-10657593)
chr5 (15-90)||(39689713-39689788)
chr5 (15-103)||(25750123-25750211)
chr5 (15-99)||(27938676-27938760)
chr5 (15-90)||(1638778-1638853)
chr5 (15-90)||(30776820-30776895)
chr5 (15-90)||(30919203-30919278)
chr5 (15-90)||(32707164-32707239)
chr5 (15-102)||(41392220-41392307)
chr5 (15-90)||(7629563-7629638)
chr5 (19-105)||(17137694-17137780)
chr5 (14-90)||(1795910-1795986)
chr5 (19-90)||(9793356-9793427)
chr5 (15-85)||(34032883-34032953)
chr5 (15-102)||(26793965-26794052)
chr5 (14-90)||(21252001-21252077)
chr5 (15-89)||(7977707-7977781)
chr5 (15-72)||(35745938-35745995)
chr5 (15-89)||(42365628-42365702)
chr5 (20-89)||(14836845-14836914)
chr5 (51-104)||(18001476-18001529)
chr5 (15-72)||(43357304-43357361)
chr5 (15-90)||(26716792-26716867)
chr5 (15-90)||(26986532-26986607)
chr5 (15-90)||(33830649-33830716)
chr5 (15-72)||(5985480-5985537)
chr5 (27-84)||(11907836-11907893)
chr5 (15-72)||(1921298-1921357)
chr5 (16-91)||(22738370-22738446)
chr5 (20-83)||(21317725-21317788)
chr5 (15-72)||(12190937-12190994)
chr5 (15-72)||(30284121-30284178)
chr5 (15-90)||(3701604-3701671)
chr5 (15-49)||(41233834-41233868)
chr5 (61-99)||(41233867-41233905)
chr5 (15-72)||(5722537-5722594)
chr5 (15-48)||(32625335-32625368)
chr5 (15-48)||(39796511-39796544)
[»] scaffold0250 (1 HSPs)
scaffold0250 (15-101)||(6186-6272)
[»] chr3 (45 HSPs)
chr3 (15-104)||(1678654-1678743)
chr3 (15-102)||(28882053-28882140)
chr3 (14-90)||(37996286-37996362)
chr3 (15-90)||(1529079-1529154)
chr3 (15-90)||(7328272-7328347)
chr3 (15-102)||(39664935-39665022)
chr3 (15-90)||(40499442-40499517)
chr3 (15-102)||(42230414-42230501)
chr3 (15-104)||(28705795-28705884)
chr3 (15-99)||(22289212-22289296)
chr3 (15-90)||(52684961-52685036)
chr3 (15-90)||(25936063-25936138)
chr3 (15-90)||(35390403-35390478)
chr3 (14-90)||(22311387-22311463)
chr3 (15-91)||(22610261-22610337)
chr3 (15-72)||(33241392-33241449)
chr3 (15-102)||(10224123-10224210)
chr3 (15-90)||(21005772-21005847)
chr3 (16-90)||(13748024-13748098)
chr3 (16-90)||(19421953-19422027)
chr3 (15-72)||(29916309-29916366)
chr3 (15-72)||(29965462-29965519)
chr3 (51-104)||(2123258-2123311)
chr3 (15-72)||(52501262-52501319)
chr3 (14-90)||(19877744-19877820)
chr3 (15-86)||(41741675-41741746)
chr3 (18-104)||(7754626-7754712)
chr3 (18-72)||(13352746-13352800)
chr3 (15-72)||(45348092-45348149)
chr3 (15-72)||(45532064-45532121)
chr3 (15-90)||(52121821-52121888)
chr3 (15-72)||(48333459-48333516)
chr3 (15-72)||(48334404-48334461)
chr3 (20-83)||(8352027-8352090)
chr3 (15-72)||(19349142-19349199)
chr3 (14-71)||(45056822-45056879)
chr3 (15-60)||(50286762-50286807)
chr3 (15-72)||(53192954-53193011)
chr3 (15-90)||(213034-213109)
chr3 (15-57)||(13803388-13803430)
chr3 (15-89)||(30786246-30786320)
chr3 (15-48)||(7899266-7899299)
chr3 (15-48)||(28969049-28969082)
chr3 (15-48)||(42464165-42464198)
chr3 (8-40)||(28548555-28548587)
[»] chr8 (32 HSPs)
chr8 (15-102)||(32878114-32878201)
chr8 (15-99)||(6029118-6029202)
chr8 (15-90)||(34900356-34900431)
chr8 (14-90)||(4246982-4247058)
chr8 (15-90)||(22200805-22200880)
chr8 (15-104)||(16385094-16385183)
chr8 (15-91)||(36484482-36484558)
chr8 (15-90)||(28875550-28875625)
chr8 (15-72)||(25022810-25022867)
chr8 (15-78)||(2871500-2871563)
chr8 (15-89)||(37372764-37372838)
chr8 (15-72)||(19436910-19436967)
chr8 (15-72)||(19573059-19573116)
chr8 (15-72)||(19947380-19947437)
chr8 (15-90)||(13422677-13422752)
chr8 (22-90)||(45216207-45216275)
chr8 (15-72)||(37669626-37669683)
chr8 (15-72)||(43770706-43770763)
chr8 (18-90)||(3892479-3892551)
chr8 (15-103)||(5540479-5540559)
chr8 (15-90)||(32425421-32425496)
chr8 (14-83)||(33123-33192)
chr8 (15-89)||(5817867-5817933)
chr8 (15-90)||(32638199-32638274)
chr8 (15-90)||(12579522-12579589)
chr8 (51-91)||(32760441-32760481)
chr8 (15-83)||(17702914-17702982)
chr8 (9-104)||(7412948-7413043)
chr8 (18-57)||(38389211-38389250)
chr8 (51-101)||(8170512-8170562)
chr8 (15-72)||(30804254-30804311)
chr8 (15-47)||(41098489-41098521)
[»] chr6 (19 HSPs)
chr6 (15-101)||(234833-234919)
chr6 (15-90)||(1035801-1035876)
chr6 (15-90)||(19128672-19128747)
chr6 (15-90)||(31186939-31187014)
chr6 (15-102)||(32018713-32018800)
chr6 (15-102)||(31738141-31738228)
chr6 (15-72)||(13607299-13607356)
chr6 (15-72)||(3213202-3213259)
chr6 (15-72)||(32130062-32130119)
chr6 (16-91)||(4153065-4153140)
chr6 (51-90)||(7187772-7187811)
chr6 (51-104)||(6707503-6707556)
chr6 (15-78)||(7255457-7255520)
chr6 (15-48)||(10893749-10893782)
chr6 (19-72)||(13060896-13060949)
chr6 (15-70)||(3299968-3300023)
chr6 (15-78)||(8357939-8357994)
chr6 (15-72)||(13044903-13044960)
chr6 (15-48)||(26327861-26327894)
[»] chr2 (37 HSPs)
chr2 (15-101)||(5371619-5371705)
chr2 (15-104)||(28746170-28746259)
chr2 (15-99)||(6496648-6496732)
chr2 (15-103)||(10574019-10574107)
chr2 (15-83)||(12819863-12819930)
chr2 (15-90)||(7877181-7877256)
chr2 (15-90)||(14216760-14216835)
chr2 (15-72)||(3564361-3564418)
chr2 (15-104)||(4562307-4562396)
chr2 (15-99)||(40431532-40431616)
chr2 (19-90)||(12206688-12206759)
chr2 (15-72)||(4169523-4169580)
chr2 (15-72)||(18301604-18301661)
chr2 (15-99)||(8482429-8482513)
chr2 (15-82)||(37354492-37354559)
chr2 (15-102)||(6125229-6125308)
chr2 (15-91)||(34146720-34146789)
chr2 (24-72)||(1006039-1006087)
chr2 (15-86)||(3545090-3545161)
chr2 (15-103)||(7806839-7806919)
chr2 (14-72)||(16562275-16562333)
chr2 (14-72)||(20537384-20537442)
chr2 (15-72)||(22571466-22571523)
chr2 (15-99)||(5588560-5588644)
chr2 (8-72)||(24586046-24586110)
chr2 (19-83)||(33737437-33737501)
chr2 (15-99)||(40536734-40536818)
chr2 (15-99)||(35342856-35342946)
chr2 (15-90)||(35997048-35997123)
chr2 (15-66)||(44157114-44157165)
chr2 (51-90)||(4356414-4356453)
chr2 (15-90)||(22485327-22485394)
chr2 (15-72)||(2319813-2319870)
chr2 (14-83)||(45157074-45157143)
chr2 (7-73)||(43215116-43215182)
chr2 (15-48)||(40307864-40307897)
chr2 (22-50)||(13995259-13995287)
[»] scaffold0177 (1 HSPs)
scaffold0177 (15-90)||(24882-24957)
[»] scaffold0836 (1 HSPs)
scaffold0836 (15-83)||(4978-5046)
[»] scaffold0640 (1 HSPs)
scaffold0640 (15-103)||(7416-7496)
[»] scaffold0005 (1 HSPs)
scaffold0005 (52-102)||(43585-43635)
[»] scaffold0060 (1 HSPs)
scaffold0060 (15-90)||(29637-29704)
[»] scaffold0240 (1 HSPs)
scaffold0240 (15-99)||(11138-11222)
[»] scaffold0285 (1 HSPs)
scaffold0285 (15-47)||(13937-13969)


Alignment Details
Target: chr4 (Bit Score: 171; Significance: 9e-92; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 103 - 345
Target Start/End: Original strand, 12205831 - 12206073
Alignment:
Q  103 gtatgaagtgattgtgcacctagcgtgacagaggtgccacacttatatagtcattggggatcagtaatgactgttggatgataagattgtaaatgaggtc 202  Q
    ||||||| ||||||||||||| | ||||||||  |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  12205831 gtatgaaatgattgtgcacctggtgtgacagatttgccacacatatatagtcattagggatcagtaatgaccgttggatgataagattgtaaatgaggtc 12205930  T
Q  203 ttcttgagaccccgttctatgccatgatgagcccatattgatttgtgcgagcgttcttgacaagcgttgtgcctgtttgtaggtattaagtagatgggtc 302  Q
    | |||||||  ||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12205931 tacttgagataccgttatgtgccatgatgagcccatattgatttgtacgagcgttcttgacaagtgttgtgcctgtttgtaggtattaagtagatgggtc 12206030  T
Q  303 attatgaggccactgatggttcattattcgaccattgtgaacc 345  Q
    ||| || ||||||| ||||||||||||||||||||||||||||    
T  12206031 attgtggggccactaatggttcattattcgaccattgtgaacc 12206073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 43509497 - 43509409
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  43509497 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcacagg 43509409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 8063157 - 8063082
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8063157 tatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 8063082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 38491838 - 38491763
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38491838 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 38491763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 31945827 - 31945753
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31945827 tatcgtatcttaatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 31945753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 52122277 - 52122189
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  52122277 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacagg 52122189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 1177497 - 1177572
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  1177497 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcagtgcagtatcgtatccgtatcgtatctcgtatc 1177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 39958320 - 39958407
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  39958320 tatcgtatcttgatttttgaaattttttcgtatcagcgtatcggtgcagtatcgtatccgtatcgtatctcgtattcggacttcacag 39958407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 5325077 - 5324987
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggta 105  Q
    ||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5325077 tatcgtatcttgatttttgaaattttttcgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacaggta 5324987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 51859313 - 51859402
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||| ||||| || ||||||||||    
T  51859313 tatcgtatcttgatttttgaaattttcccgtgtcggcgtatcggtgcagtatcgtatctgtatcgtatcttgtatccaggcttcacaggt 51859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 40694588 - 40694664
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  40694588 tatcgtatcttaatttttgaaattttcccgtatcaacgtattcgtgcagtattgtatccgtatcgtatctcgtatct 40694664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19739167 - 19739242
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||    
T  19739167 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtgtcgtatccgtatcgtatctcgtatc 19739242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 24784989 - 24785064
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  24784989 tatcgtatcttgatttttgaaaattttccgtatcaacgtatcggtgcagtattgtatctgtatcgtatctcgtatc 24785064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 24823277 - 24823202
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  24823277 tatcgtatcttgatttttgaaaattttccgtatcaacgtatcggtgcagtattgtatctgtatcgtatctcgtatc 24823202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 42472226 - 42472151
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||   |||||||||||||| |||||||||||||||||||||||||    
T  42472226 tatcgtatcttgatttttgaaatttttccgtattggcgtatcggtgcagtgtcgtatccgtatcgtatctcgtatc 42472151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 3402635 - 3402559
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||| ||||||| || |||| |||||||||| || |||||||||||||||||||||||||||    
T  3402635 atatcgtatcttgatttttaaaatttttccatatcgacgtatcggtacaatatcgtatccgtatcgtatctcgtatc 3402559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 42630055 - 42629980
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||| |||||    
T  42630055 tatcgtatcttaatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatctatatcgtatcttgtatc 42629980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 258684 - 258627
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  258684 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 53324733 - 53324790
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  53324733 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 53324790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 36511530 - 36511456
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||||| |||| |||||||||| ||||  |||||| |||||||||||||||||||||| |||||||||    
T  36511530 tatcgtatcttgacttttaaaattttcccatatcggcgtatcagtgcagtatcgtatccgtatcgcatctcgtat 36511456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 10258561 - 10258625
Alignment:
Q  8 ccaacaatatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||| |||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||    
T  10258561 ccaaccatatcgtatcttgatttttgaaattttttcgtattgacgtatcggtgcagtatcgtatc 10258625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 44521624 - 44521568
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtat 71  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  44521624 tatcgtatcttgatttttgaaatttttccgtatagacgtatcggtgcagtatcgtat 44521568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 6070981 - 6070911
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctc 85  Q
    ||||||||||| |||||| ||||||| | |||||||||||||| ||||||| |||||| ||||||||||||    
T  6070981 tatcgtatctttattttttaaatttttctgtatcaacgtatcgatgcagtaacgtatctgtatcgtatctc 6070911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 14796096 - 14796146
Alignment:
Q  52 gtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  14796096 gtatcggtgcagtatcgtatccgtatcgtatctcgtatctgggcttcacag 14796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 52573681 - 52573748
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||    
T  52573681 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtatcgtatccgtatcgtatctcgtatc 52573748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 28377557 - 28377614
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||    
T  28377557 tatcgtatcttgatttttgaaattttctcgtatcggcgtatcagtgcagtatcgtatc 28377614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 46431540 - 46431483
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||  |||||| || ||||||||||||||||||||    
T  46431540 tatcgtatcttgatttttgaaattttttcgtatcgacatatcggtgcagtatcgtatc 46431483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 31227549 - 31227623
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||||||||||||| | |||||   ||||||||||||||||||||  |||||||||||||||||    
T  31227549 tatcgtatcttaatttttgaaatttttc-gtatcggagtatcggtgcagtatcgtatatgtatcgtatctcgtatc 31227623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 24793307 - 24793238
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    ||||||||||||||||||||||||||    | ||   ||||||||||||||||||||| ||||||||||||||||||    
T  24793307 tatcgtatcttgatttttgaaatttt----tttc---gtatcggtgcagtatcgtatctgtatcgtatctcgtatct 24793238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 3108884 - 3108818
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||||||||||||||||||      |||  |||| |||||||||||||||||||||||||||||||||    
T  3108884 tatcgtatcttgatttttgaaatttt------tca--gtattggtgcagtatcgtatccgtatcgtatctcgtat 3108818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 17892812 - 17892860
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||    
T  17892812 cgtatcggtgcaatatcgtatccgtatcgtatctcgtatccaggcttca 17892860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 27982452 - 27982520
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    ||||||||||||| |||| ||||||| ||||||||  |||||||||  |||||||||| ||||||||||    
T  27982452 tatcgtatcttgaattttaaaatttttccgtatcactgtatcggtgtcgtatcgtatctgtatcgtatc 27982520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 7952738 - 7952681
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| || ||||  |||||| |||| ||||||||||    
T  7952738 tatcgtatcttgatttttgaaatttttccatatcggcgtatcagtgccgtatcgtatc 7952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 44121472 - 44121415
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||| | |||| |||||||| |||||| |||||||||| ||||||||||||    
T  44121472 tatcgtatcttaaattttaaaattttctcgtatcgacgtatcggtacagtatcgtatc 44121415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 51675305 - 51675361
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||| |||||||||||||||||||| ||||||| | ||||||||||||| ||||    
T  51675305 tatcgtattttgatttttgaaattttccc-tatcaacatgtcggtgcagtatcatatc 51675361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 25699953 - 25700037
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    ||||||||||||| |||| |||||||||| ||||  | |||| |||| |||||||||| ||||| ||||  |||||||| |||||    
T  25699953 tatcgtatcttgaattttaaaattttcccttatcggcatatcagtgccgtatcgtatcagtatcatatcatgtatctaggcttca 25700037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 52721988 - 52722021
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    ||||||||||||||||||||||||||||| ||||    
T  52721988 tatcgtatcttgatttttgaaattttcccatatc 52722021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 2586891 - 2586927
Alignment:
Q  53 tatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||||||||||||| || |||||||    
T  2586891 tatcggtgcagtatcgtatccgtatcataactcgtat 2586927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 36944242 - 36944290
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||| ||||||||||||||||||||||||| || ||||  |||||||    
T  36944242 cgtatcagtgcagtatcgtatccgtatcgtatttcatatccggacttca 36944290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 1042640 - 1042551
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  1042640 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcacaggt 1042551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 12103489 - 12103576
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  12103489 tatcgtatcttgatttttgaaatttttccgtatcagcgtatcggtgcagtatcgtatccgtatcgtatctcgtatctgggcttcacag 12103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 19511212 - 19511299
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  19511212 tatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatctgtatcgtatctcgtatccaggcttcacag 19511299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 40096715 - 40096803
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  40096715 tatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacagg 40096803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 4292214 - 4292301
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| || ||||||||    
T  4292214 tatcgtatcttgatttttgaaattttcccatatcaacgtatcggtgcagtatcgtatccatatcgtatcacgtatccaggcttcacag 4292301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 48154567 - 48154642
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  48154567 tatcgtatcttgatttttgaaattttctcgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 48154642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 9249796 - 9249708
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||  | |||||||||    
T  9249796 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatccgtatcgtatctcgtatccgggcttcacagg 9249708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 9283346 - 9283258
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||  | |||||||||    
T  9283346 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatccgtatcgtatctcgtatccgggcttcacagg 9283258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 25970137 - 25970225
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||  | |||||||||    
T  25970137 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatccgtatcgtatctcgtatccgggcttcacagg 25970225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 26773152 - 26773064
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| || |||||||||    
T  26773152 tatcgtatcttgatttttaaaattttcccgtatcgacgtatcagtgcagtatcgtatccgtatcgtttctcgtatccaggcttcacagg 26773064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 34122205 - 34122116
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    ||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||||||||||||||||  | ||||||||||    
T  34122205 tatcgtatcttgatttttgaaattttttcgtatcgacgtatcagtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacaggt 34122116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 42897448 - 42897537
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||  | ||||||||||    
T  42897448 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtgtcgtatccgtatcgtatctcgtatccgggcttcacaggt 42897537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 554492 - 554420
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgt 87  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  554492 tatcgtatcttgatttttgaaattttcccgtatcggcgtatcggtgcagtattgtatccgtatcgtatctcgt 554420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 27554917 - 27554842
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  27554917 tatcgtatcttaatttttgaaatttttccgtatcagcgtatcggtgcagtatcgtatacgtatcgtatctcgtatc 27554842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 36413885 - 36413960
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||||    
T  36413885 tatcgtatcttgatttttgaaattttcccgtatcgacgtatcagtgcagtatcatattcgtatcgtatctcgtatc 36413960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 47237806 - 47237731
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||    
T  47237806 tatcgtatcttgatttttgaaattttcccatattaacatatcggtgcagtatcgtatctgtatcgtatctcgtatc 47237731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 26973575 - 26973664
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| |||||||  ||||||  ||||||||||||| ||||||||||||||||||  | ||||||||||    
T  26973575 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcaatgcagtatcgtattcgtatcgtatctcgtatccgggcttcacaggt 26973664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 38065232 - 38065316
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||| || |||||  |||||||    
T  38065232 tatcgtatcttgatttttgaaatttttccgtatcggcatatcggtgcagtatcgtatccgtatcgtaccttgtatccggacttca 38065316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 39521622 - 39521696
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||| ||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  39521622 tatcgtat-ttgatttttgaaatttttccgtatcgacgtatcgatgcagtatcatatccgtatcgtatctcgtatc 39521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 21180355 - 21180430
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| | |||||||| ||| |||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  21180355 tatcgtatcttaaattttgaaagttttccgtatcagcgtatcgatgcagtatcgtatccgtatcatatctcgtatc 21180430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 47718748 - 47718678
Alignment:
Q  19 gtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||||||||| |||| ||| |||  ||||||||||||||||||||||| |||||||||||||||    
T  47718748 gtatcttgatttttgaattttttccgcatcggcgtatcggtgcagtatcgtatccttatcgtatctcgtat 47718678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 16563815 - 16563758
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  16563815 tatcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgcaatattgtatc 16563758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 16601847 - 16601904
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  16601847 tatcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgcaatattgtatc 16601904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 27397177 - 27397120
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  27397177 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 27397120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 26843630 - 26843574
Alignment:
Q  16 atcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  26843630 atcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 26843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 8029354 - 8029411
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||||    
T  8029354 tatcgtatcttgatttttgaaattttcccatatcggcgtatcagtgcagtatcgtatc 8029411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 24956760 - 24956834
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||| |  ||||  ||||||| ||||||||||||||  |||||||||||||||||    
T  24956760 tatcgtatcttgatttttgaaatttccttgtattgacgtatcagtgcagtatcgtat-tgtatcgtatctcgtatc 24956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 34238622 - 34238702
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| |||||        |||||||||| |||||||||||||||||||||||||  | |||||||||    
T  34238622 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtgtcgtatccgtatcgtatctcgtatccgggcttcacagg 34238702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 48163974 - 48164041
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||        ||||||||||||||||||||||| ||||||||||||    
T  48163974 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtatcgtatccgtattgtatctcgtatc 48164041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 35160399 - 35160456
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||| ||||||| ||||||| |||||||| ||||||||| ||||    
T  35160399 tatcgtatcttgatttttaaaatttttccgtatcgacgtatcgatgcagtatcatatc 35160456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 11830777 - 11830813
Alignment:
Q  53 tatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||||||||||||||||||||||||    
T  11830777 tatcggtgcagtatcgtatccgtatcgtatctcgtat 11830813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 23078676 - 23078612
Alignment:
Q  26 gatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||  |||||| | |||||||| ||||||||||||||||| ||||||||||||    
T  23078676 gatttttgaaactttttcgtatcgatgtatcggtacagtatcgtatccgtattgtatctcgtatc 23078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 16851386 - 16851425
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  16851386 cgtatcggtgcagtatcgtatccatatcgtatctcgtatc 16851425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 21409903 - 21409970
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| || ||||        |||||||||||||| |||||||||||||||||||    
T  21409903 tatcgtatcttgatttttgaaatttttccatatc--------ggtgcagtatcgtacccgtatcgtatctcgtatc 21409970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 36661518 - 36661580
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctc 85  Q
    |||||||||||||||||||||||||| |||||||        || ||||||||||||||||||||||||||    
T  36661518 tatcgtatcttgatttttgaaatttttccgtatc--------ggcgcagtatcgtatccgtatcgtatctc 36661580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 11705128 - 11705227
Alignment:
Q  125 gcgtgacagaggtgccacacttatatagtcattggggatcagtaatgactgttggatgataagattgtaaatgaggtcttcttgagaccccgttctatgc 224  Q
    ||||| ||||| |||||||||||||||| ||| |  || |||||||||| |||| ||||||||||| ||  |||| || || ||||||||| ||| ||||    
T  11705128 gcgtggcagagatgccacacttatatagacatcgaagaccagtaatgaccgttgaatgataagattataggtgagatcgtcatgagaccccattccatgc 11705227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 27354516 - 27354555
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  27354516 cgtatcgatgcagtatcgtatccgtatcgtatcttgtatc 27354555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 36757564 - 36757513
Alignment:
Q  52 gtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||| || |||||||||| ||||||||||||||||  |||||||||||    
T  36757564 gtatcggtacaatatcgtatccatatcgtatctcgtatccggacttcacagg 36757513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 36767088 - 36767037
Alignment:
Q  52 gtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||| || |||||||||| ||||||||||||||||  |||||||||||    
T  36767088 gtatcggtacaatatcgtatccatatcgtatctcgtatccggacttcacagg 36767037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 29188910 - 29188853
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||| | |||| |||||||||||||||  |||||| |||| ||||||||||    
T  29188910 tatcgtatcttaaatttttaaattttcccgtatcgccgtatcagtgccgtatcgtatc 29188853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 35136544 - 35136601
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||| ||||| |||||||||| ||| || ||||| ||||||||||| ||||||||||    
T  35136544 tatcgcatcttaatttttgaaaattttccttatcagcgtatcggtgccgtatcgtatc 35136601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 7e-37; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 37346416 - 37346330
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcaca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  37346416 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcaca 37346330  T

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Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 6915924 - 6915835
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  6915924 tatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacaggt 6915835  T

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Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 36363125 - 36363036
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  36363125 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacaggt 36363036  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 38331495 - 38331583
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  38331495 tatcgtatcttgatttttgaaattttaccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacagg 38331583  T

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Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 3427903 - 3427990
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  3427903 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcacag 3427990  T

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Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28948266 - 28948191
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28948266 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 28948191  T

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Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 52894763 - 52894688
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52894763 tatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 52894688  T

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Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 8133225 - 8133300
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  8133225 tatcgtatcttgatttttgaaattttaccgtatcgacgtatcagtgcagtatcgtatccgtatcgtatctcgtatc 8133300  T

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Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 37104696 - 37104771
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37104696 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 37104771  T

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Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 30324763 - 30324851
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||  | |||||||||    
T  30324763 tatcgtatcttaatttttgaaatttttccgtatcaacgtatcgatgcagtatcgtatccgtatcatatctcgtatccgggcttcacagg 30324851  T

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Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 10822911 - 10822985
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  10822911 tatcgtatcttgatttttgaaatttctccgtatcaacgtatcggtacagtattgtatccgtatcgtatctcgtat 10822985  T

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Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 20409171 - 20409084
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||| |||||||  | |||||||||||||||||||| |||||||||||||||| | | ||||||||    
T  20409171 tatcgtatcttgatttttgaaatttttccgtatcggcatatcggtgcagtatcgtatctgtatcgtatctcgtatatgggcttcacag 20409084  T

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Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 25257659 - 25257734
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||||||| |||||||||||    
T  25257659 tatcgtatcttgatttttgaaatttttccatatcggcgtatcggtgcagtatcgtatccgtatcatatctcgtatc 25257734  T

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Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 13012448 - 13012391
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13012448 tatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatc 13012391  T

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Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 29862318 - 29862402
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||||||||| |||| || ||||||| || |||||||||||| |||||||||||||||||  |||||||    
T  29862318 tatcgtatcttgatttttgaaatttttccgtttcgacgtatcagtacagtatcgtatctgtatcgtatctcgtatccggacttca 29862402  T

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Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 34432018 - 34431943
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||| ||| ||| || |||||| ||||||||||||||||||||||||||| |||||||||||    
T  34432018 tatcgtatcttgatttttaaaaattttccatatcaatgtatcggtgcagtatcgtatccgtatcatatctcgtatc 34431943  T

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Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9782162 - 9782236
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| |||||| |||||||||||||| ||||||    
T  9782162 tatcgtatcttgatttttgaaattttcccgtatcggcgtatcagtgtagtatcatatccgtatcgtatatcgtat 9782236  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 31652875 - 31652818
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  31652875 tatcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgcaatatcgtatc 31652818  T

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Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 29168465 - 29168540
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||| |||  |||||||||||    
T  29168465 tatcgtatcttaatttttgaaattttcctgtatcgacgtatcggtgcaatatcgtatccatattatatctcgtatc 29168540  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 32380659 - 32380585
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||| ||||||||||||||||||||| ||||||| |||||||  ||||||||| ||| |||||||||||||||||    
T  32380659 tatcatatcttgatttttgaaatttttccgtatcgacgtatcattgcagtatcatatacgtatcgtatctcgtat 32380585  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 4027426 - 4027369
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  4027426 tatcgtatcttgatttttgaaaattttccgtatcgacgtatcggtgcagtatcgtatc 4027369  T

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Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 38218881 - 38218938
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  38218881 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcagtgcagtatcgtatc 38218938  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 5985234 - 5985292
Alignment:
Q  16 atcgtatcttgatttttgaaattttcccgtatcaacgtatcg--gtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  5985234 atcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgtgcagtatcgtatc 5985292  T

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Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 33040896 - 33040971
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||||||||||||| ||| ||  |||||||||| ||||||| |||||| |||||||||||||||    
T  33040896 tatcgtatcttaatttttgaaatttttccgcatagacgtatcggttcagtatcatatccgcatcgtatctcgtatc 33040971  T

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Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 34096152 - 34096073
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    ||||||||||||||||||||||||||||||     || |||| ||||| ||||||||||||||||||||| |||||  |||||||    
T  34096152 tatcgtatcttgatttttgaaattttcccg-----acatatcagtgcaatatcgtatccgtatcgtatcttgtatccggacttca 34096073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 2472320 - 2472246
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||| ||||||||  ||||| || |||  |||||||||| ||||||||||||||||||||||    
T  2472320 tatcgtatcttgatttttaaaattttct-gtatcgacatattagtgcagtatcatatccgtatcgtatctcgtatc 2472246  T

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Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 1037062 - 1037100
Alignment:
Q  52 gtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1037062 gtatcggtgcagtatcgtatccgtatcgtatctcgtatc 1037100  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 1043968 - 1044006
Alignment:
Q  52 gtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1043968 gtatcggtgcagtatcgtatccgtatcgtatctcgtatc 1044006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 2364894 - 2364968
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||| |||||| ||| |||   ||||||||||||| |||||||||||||||||||| |||||| ||||    
T  2364894 tatcgtatcttaatttttaaaacttttatgtatcaacgtatcagtgcagtatcgtatccgtattgtatcttgtat 2364968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 43190306 - 43190373
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||| ||||    
T  43190306 tatcgtatcttgatttttgaaattttcc--------cgtatcggtgcagtatcgtatccgtatcatatctcctatc 43190373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 3703886 - 3703829
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||| ||||||||||||||  |||||| |||||||||||||||||| ||||    
T  3703886 tatcgtatcttaatttttgaaattttttcgtatcgacgtatcggtgcagtatcatatc 3703829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 10764153 - 10764210
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||  | ||||| |||||| |||||||||||||||    
T  10764153 tatcgtatcttgatttttgaaattttttcatatcagcgtatcagtgcagtatcgtatc 10764210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 28658461 - 28658404
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||| ||| |||||||  | ||| ||||||||||||||||    
T  28658461 tatcgtatcttgatttttgaaaattttccgtatcggcatataggtgcagtatcgtatc 28658404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 38949231 - 38949270
Alignment:
Q  63 gtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  38949231 gtatcgtacccgtatcgtatctcgtatctggacttcacag 38949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 14334815 - 14334848
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||| |||||||||    
T  14334815 tatcgtatcttgatttttgaaattctcccgtatc 14334848  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 36551922 - 36551955
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  36551922 tatcgtatcttgatttttgaaatttttccgtatc 36551955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 24852080 - 24852120
Alignment:
Q  62 agtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  24852080 agtatcgtatccgtatcgcatctcgtatccggacttcacag 24852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 10657504 - 10657593
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  10657504 tatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcacaggt 10657593  T

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Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 39689788 - 39689713
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39689788 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 39689713  T

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Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 25750123 - 25750211
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||  | |||||||||    
T  25750123 tatcgtatcttgatttttgaaattttcctgtatcgacgtatcgatgcagtatcgtatccgtatcgtatctcgtatccgggcttcacagg 25750211  T

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Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 27938676 - 27938760
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  27938676 tatcgtatcttgatttttaaaattttcccgtatcgacgtatcggtgcagtatcgtatccgtattgtatctcgtatccggacttca 27938760  T

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Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 1638853 - 1638778
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  1638853 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 1638778  T

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Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 30776895 - 30776820
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  30776895 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatccgtatcgtatctcgtatc 30776820  T

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Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 30919203 - 30919278
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30919203 tatcgtatcttgatttttgaattttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 30919278  T

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Target: chr5; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 32707239 - 32707164
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32707239 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 32707164  T

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Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 41392307 - 41392220
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  41392307 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcagtgcagtatcgtatccgtatcgtatctcgtatctgggcttcacag 41392220  T

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Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 7629563 - 7629638
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||||||    
T  7629563 tatcgtatcttgatttttgaaattttcccgtgtcaatgtatcggtgcagtattatatccgtatcgtatctcgtatc 7629638  T

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Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 17137780 - 17137694
Alignment:
Q  19 gtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggta 105  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||  |||||||||||||    
T  17137780 gtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcatatctatatcgtatctcgtatccggacttcacaggta 17137694  T

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Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 1795910 - 1795986
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||||| |||||    
T  1795910 atatcgtatcttgatttttgaaattttcccttatcggcgtatcagtgcagtatcgtatccgtatcgtatcttgtatc 1795986  T

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Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 9793356 - 9793427
Alignment:
Q  19 gtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||    
T  9793356 gtatcttgatttttgaaattttgccgtatcgacatatcggtgcagtatcgtatccgtatcgcatctcgtatc 9793427  T

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Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 34032883 - 34032953
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctc 85  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||    
T  34032883 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcgatgcagtatcgtatccatatcgtatctc 34032953  T

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Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 26794052 - 26793965
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||| ||||||| ||||||  |||||||| || |||||||||||||||||||||||| |||| || ||||||||    
T  26794052 tatcgtatcttgatttttaaaatttttccgtattgacgtatcgatgtagtatcgtatccgtatcgtatctcttatcaaggcttcacag 26793965  T

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Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21252001 - 21252077
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||| | ||||  || ||||||||||||||||||| ||||| ||||||||||||    
T  21252001 atatcgtatcttgatttttgaaatttttctgtattgacatatcggtgcagtatcgtatacgtattgtatctcgtatc 21252077  T

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Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 7977707 - 7977781
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||||||||||||| |  ||||  ||||||||||||||||||||||| ||||||||| |||||    
T  7977707 tatcgtatcttgatttttgaaatttttctctatcggcgtatcggtgcagtatcgtatccatatcgtatcacgtat 7977781  T

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Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 35745995 - 35745938
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  35745995 tatcgtatcttgatttttgaaattttctcgtatcgacgtatcggtgcagtaccgtatc 35745938  T

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Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 42365702 - 42365628
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||||| ||||| ||||||||| || ||||| ||||||| | |||||||||| ||||||||||    
T  42365702 tatcgtatcttgatttttaaaattgtcccgtatcgacatatcgatgcagtaacatatccgtatcatatctcgtat 42365628  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 14836845 - 14836914
Alignment:
Q  20 tatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||||||||||||| |  |||| |||||||  ||||||||| |||||||||||||||||||||    
T  14836845 tatcttgatttttgaaatttttctatatcgacgtatcaatgcagtatcatatccgtatcgtatctcgtat 14836914  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 18001529 - 18001476
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  18001529 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacaggt 18001476  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 43357361 - 43357304
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||    
T  43357361 tatcgtatcttgatttttgtaattttcccatatcgacgtatcagtgcagtatcgtatc 43357304  T

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Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 26716792 - 26716867
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||| || ||||||||||||||| |||||| |||||||||||||||||  |||  ||||||||||| |||||    
T  26716792 tatcgtatattaatttttgaaattttctcgtatcgacgtatcggtgcagtattatatatgtatcgtatcttgtatc 26716867  T

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Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 26986532 - 26986607
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||| || ||||||||||||||| |||||| |||||||||||||||||  |||  ||||||||||| |||||    
T  26986532 tatcgtatattaatttttgaaattttctcgtatcgacgtatcggtgcagtattatatatgtatcgtatcttgtatc 26986607  T

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Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 33830649 - 33830716
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||        |||||||||||||||||| |||||||||||||||||    
T  33830649 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtatcgtatctgtatcgtatctcgtatc 33830716  T

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Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 5985537 - 5985480
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||| |||||||||||||||  |||||| ||| |||||||||||    
T  5985537 tatcgtatcttgatttttaaaattttcccgtatcggcgtatcagtgtagtatcgtatc 5985480  T

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Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 11907836 - 11907893
Alignment:
Q  27 atttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatct 84  Q
    |||||||||||||| ||||||| |||||||  ||||||||||||||| ||||||||||    
T  11907836 atttttgaaatttttccgtatcgacgtatcaatgcagtatcgtatccatatcgtatct 11907893  T

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Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 1921298 - 1921357
Alignment:
Q  15 tatcgtatcttgatttttgaaa--ttttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||  |||| ||||||| ||||||||||| |||||||||||    
T  1921298 tatcgtatcttgatttttgaaatttttttccgtatcgacgtatcggtgtagtatcgtatc 1921357  T

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Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 22738370 - 22738446
Alignment:
Q  16 atcgtatcttgatttttgaaattttcccgta-tcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    |||||||||||||||||||||||||  |||| ||  ||||||| |||||||||||||| ||||  ||||||||||||    
T  22738370 atcgtatcttgatttttgaaattttttcgtattcggcgtatcgttgcagtatcgtatctgtattatatctcgtatct 22738446  T

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Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 21317725 - 21317788
Alignment:
Q  20 tatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    |||||| | |||| ||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  21317725 tatcttaaattttaaaattttcccgtagcgacgtatcggtgccgtatcatatccgtatcgtatc 21317788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 12190937 - 12190994
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||| |||| ||||||| |||||||||||||||| ||| |||| |||||    
T  12190937 tatcgtatcttgaattttaaaatttttccgtatcaacgtatcgatgccgtattgtatc 12190994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 30284178 - 30284121
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||| |  |||| | ||||| |||||||||||||||||||||||    
T  30284178 tatcgtatcttgatttttaatttttttctgtatcgacgtatcggtgcagtatcgtatc 30284121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 3701604 - 3701671
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||| |||||||||||| || |||||        ||||||||||||||||||||||||||| |||||    
T  3701604 tatcgtatcttgagttttgaaatttttccatatca--------gtgcagtatcgtatccgtatcgtatcttgtatc 3701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 41233834 - 41233868
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatca 49  Q
    |||||||||||||||||||||||||| ||||||||    
T  41233834 tatcgtatcttgatttttgaaatttttccgtatca 41233868  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 41233867 - 41233905
Alignment:
Q  61 cagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  41233867 cagtatcgtatccgtatcgtttctcgtatccagacttca 41233905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 5722537 - 5722594
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||   |  |||||| || ||||||||||||||||||||    
T  5722537 tatcgtatcttgatttttgaaaaaatttcgtatcgacatatcggtgcagtatcgtatc 5722594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 32625335 - 32625368
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  32625335 tatcgtatcttgatttttgaaatttttccgtatc 32625368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 39796544 - 39796511
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  39796544 tatcgtatcttgatttttgaaatttttccgtatc 39796511  T

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Target: scaffold0250 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 6186 - 6272
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  6186 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcatatccgtatcgtatctcgtatccaggcttcaca 6272  T

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Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 1678743 - 1678654
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  1678743 tatcgtatcttgatttttgaaattttaccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccggacttcacaggt 1678654  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 28882140 - 28882053
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  28882140 tatcgtatcttcatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatctgtatcgtatctcgtatccaggcttcacag 28882053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 37996362 - 37996286
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  37996362 atatcgtatcttgatttttgaaatttttccatatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 37996286  T

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Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 1529079 - 1529154
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1529079 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 1529154  T

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Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 7328272 - 7328347
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7328272 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 7328347  T

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Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 39664935 - 39665022
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||  ||||||||||    
T  39664935 tatcgtatcttgatttttgaaattttcccgtatcgacgtatcagtacagtatcgtatccgtatcgtatctcgtatccggacttcacag 39665022  T

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Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 40499442 - 40499517
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40499442 tatcgtatcttgatttttgaaatttttccgtatcaacatatcggtgcagtatcgtatccgtatcgtatctcgtatc 40499517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 42230414 - 42230501
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  42230414 tatcgtatcttgatttttgaaattttctcgtatcgacgtatcggtgcagtatcgtatccgtatcatatctcgtatccaggcttcacag 42230501  T

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Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 28705795 - 28705884
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  28705795 tatcatatcttgatttttgaaattttgccgcatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccggacttcacaggt 28705884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 22289296 - 22289212
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||  |||||||    
T  22289296 tatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatctgtatcatatctcgtatcaggacttca 22289212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 52684961 - 52685036
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  52684961 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatcttgtatc 52685036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 25936138 - 25936063
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||||||||||||||||    
T  25936138 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctgtatcgtatctcgtatc 25936063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35390403 - 35390478
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35390403 tatcgtatcttaatttttaaaattttcccatatcaacgtatcggtgcagtatcatatccgtatcgtatctcgtatc 35390478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 22311387 - 22311463
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||| |||||    
T  22311387 atatcgtatcttgatttttgaaattttctcatatcaacgtatcggtacagtatcgtatccgtatcatatcttgtatc 22311463  T

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Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 22610337 - 22610261
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    |||||||||||||||||||||| ||| | |||||  |||||||||||||||||||||||||||||||||||||||||    
T  22610337 tatcgtatcttgatttttgaaaattttctgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 22610261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 33241392 - 33241449
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33241392 tatcgtatcttgatttttgaaattttcccgtattaacgtatcggtgcagtatcgtatc 33241449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 10224210 - 10224123
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||| ||||||| ||||||  |||||||| || |||||||||||||||||||||||| |||| || ||||||||    
T  10224210 tatcgtatcttgatttttaaaatttttccgtattgacgtatcgatgtagtatcgtatccgtatcgtatctcttatcaaggcttcacag 10224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 21005847 - 21005772
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||| |||||||||||||||||||||  | |||| |||||||||||||||||| ||||||||||||||||||||||    
T  21005847 tatcctatcttgatttttgaaattttttcatatcgacgtatcggtgcagtatcatatccgtatcgtatctcgtatc 21005772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 13748098 - 13748024
Alignment:
Q  16 atcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||| ||||||||||||||| |||| || || ||||||| ||||||||||||||||||||||    
T  13748098 atcgtatcttgatttttaaaattttcccgtatcgacgtttcagtacagtatcttatccgtatcgtatctcgtatc 13748024  T

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Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 19421953 - 19422027
Alignment:
Q  16 atcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||| || |||| ||||||| |||||||||||||| |||||| |||||||||||    
T  19421953 atcgtatcttgatttttgaaatttttccatatcgacgtatcagtgcagtatcgtattcgtatcatatctcgtatc 19422027  T

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Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 29916309 - 29916366
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29916309 tatcgtatcttgatttttgaaattttcccatatcatcgtatcggtgcagtatcgtatc 29916366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 29965462 - 29965519
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29965462 tatcgtatcttgatttttgaaattttcccatatcatcgtatcggtgcagtatcgtatc 29965519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 2123258 - 2123311
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  2123258 cgtatcggtacagtatcgtatccgtatcgtatctcgtatctaggcttcacaggt 2123311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 52501319 - 52501262
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  52501319 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 52501262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 19877820 - 19877744
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||| |||||||||||||| ||||||||   ||||| | |||||| |||||||||||||||||||||||    
T  19877820 atatcgtatcttaatttttgaaatttttccgtatcagtctatcgatacagtattgtatccgtatcgtatctcgtatc 19877744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 41741746 - 41741675
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcg 86  Q
    |||||||| |||||||||||||||||| |||||| |||||||  ||||||||| |||| |||||||||||||    
T  41741746 tatcgtatattgatttttgaaattttctcgtatcgacgtatcaatgcagtatcatatctgtatcgtatctcg 41741675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 7754626 - 7754712
Alignment:
Q  18 cgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||| |||| ||||||||||||||| |||||||||||| ||||| ||||||||| |||||  |||||| | ||||| ||||    
T  7754626 cgtatcttgaattttaaaattttcccgtatcgacgtatcggtgccgtatcatatccgtattgtatcatgtatctgggcttcataggt 7754712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 13352800 - 13352746
Alignment:
Q  18 cgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  13352800 cgtatcttgatttttgaaatttttccatatcaacgtatctgtgcagtatcgtatc 13352746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 45348092 - 45348149
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||    
T  45348092 tatcgtattttgatttttgaaattttcccgtatcgacgtatcagtacagtatcgtatc 45348149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 45532121 - 45532064
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||    
T  45532121 tatcgtatctttatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 45532064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 52121821 - 52121888
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||    
T  52121821 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtatcgtatccgtaccgtatctcgtatc 52121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 48333459 - 48333516
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||| ||||||||||||||||||||  ||| ||| |||||||||||||||||||||||    
T  48333459 tatcatatcttgatttttgaaatttatccgcatcgacgtatcggtgcagtatcgtatc 48333516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 48334404 - 48334461
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||  | ||||| |||||||||| ||||||||||||    
T  48334404 tatcgtatcttgatttttgaaatttatctgtatcgacgtatcggtacagtatcgtatc 48334461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 8352090 - 8352027
Alignment:
Q  20 tatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    |||||||| ||||||||||||| ||||||| |||||||||   ||||||||||||| |||||||    
T  8352090 tatcttgaattttgaaattttcacgtatcatcgtatcggtatcgtatcgtatccgtgtcgtatc 8352027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 19349199 - 19349142
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| |||| || || |||| ||| |||||||||||    
T  19349199 tatcgtatcttgatttttgaaattttaccgtgtcgacatatcagtgtagtatcgtatc 19349142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 45056879 - 45056822
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtat 71  Q
    ||||||||||||||||||||||||||| | ||||| ||||||  |||||||| |||||    
T  45056879 atatcgtatcttgatttttgaaatttttctgtatcgacgtattagtgcagtaacgtat 45056822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 50286807 - 50286762
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtg 60  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  50286807 tatcgtatcttaatttttgaatttttcccgtatcaacgtattggtg 50286762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 53192954 - 53193011
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||| ||||  ||||||  || |||||||||||||||||||    
T  53192954 tatcgtatcttgatttttgaatttttttcgtatcggcgaatcggtgcagtatcgtatc 53193011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 213034 - 213109
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||| ||| ||||||||||||||||| ||||||| |||||  | ||||||||| |||  |||||||||||| ||||    
T  213034 tatcatatattgatttttgaaatttttccgtatcgacgtactgatgcagtatcatatttgtatcgtatctcatatc 213109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 13803430 - 13803388
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcg 57  Q
    |||||| |||||| ||||||||||||||||||||| |||||||    
T  13803430 tatcgtttcttgaattttgaaattttcccgtatcagcgtatcg 13803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 30786320 - 30786246
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||| | || |||| ||||| | || ||||| || ||||| ||||||| ||||||||||||||    
T  30786320 tatcgtatcttgatttataaattttttccgtaccgacatatcgttgtagtatagtatccgaatcgtatctcgtat 30786246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 7899299 - 7899266
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  7899299 tatcgtatcttgatttttgaaatttttccgtatc 7899266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 28969049 - 28969082
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  28969049 tatcgtatcttgatttttgaaatttttccgtatc 28969082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 42464198 - 42464165
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  42464198 tatcgtatcttgatttttgaaatttttccgtatc 42464165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 28548555 - 28548587
Alignment:
Q  8 ccaacaatatcgtatcttgatttttgaaatttt 40  Q
    ||||| |||||||||||||||||||||||||||    
T  28548555 ccaaccatatcgtatcttgatttttgaaatttt 28548587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 32878114 - 32878201
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  32878114 tatcgtatcttgatttttgaaattttcccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcacag 32878201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 6029118 - 6029202
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6029118 tatcgtatcttgatttttgaaatttttctgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatccagacttca 6029202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 34900431 - 34900356
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34900431 tatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 34900356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 4246982 - 4247058
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  4246982 atatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatctgtatcgtatctcgtatc 4247058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 22200880 - 22200805
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  22200880 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 22200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 16385094 - 16385183
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||  | ||||||||||    
T  16385094 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcatatctcgtatccgggcttcacaggt 16385183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 36484482 - 36484558
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    |||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  36484482 tatcgtatcttgatttttgaaaattttccgtatcgacgtatcagtgcagtatcgtatccgtatcgtatctcgtatct 36484558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28875625 - 28875550
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  28875625 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcgatgcagtatcgtatccgtatcgtatctcgtatc 28875550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 25022810 - 25022867
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25022810 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 25022867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 2871563 - 2871500
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatc 78  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  2871563 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatc 2871500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 37372764 - 37372838
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    |||||||||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| |||||||||||    
T  37372764 tatcgtatcttgatttttgaaattttcctgtatcaacatattgatgcagtatcgtatccgtattgtatctcgtat 37372838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 19436910 - 19436967
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19436910 tatcgtatcttgatttttgaaattttcccgtatcaatgtatcggtgcagtatcgtatc 19436967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 19573059 - 19573116
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19573059 tatcgtatcttgatttttgaaattttcccgtatcaatgtatcggtgcagtatcgtatc 19573116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 19947437 - 19947380
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19947437 tatcgtatcttgatttttgaaattttcacgtatcaacgtatcggtgcagtatcgtatc 19947380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 13422677 - 13422752
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||| ||| ||| || ||||  ||||||||||||||||||||||||||||||||||||||||    
T  13422677 tatcgtatcttgatttttaaaaattttccatatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 13422752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 45216275 - 45216207
Alignment:
Q  22 tcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||||||||||||||    
T  45216275 tcttgatttttgaaatttttctatatcgacgtatcagtgcagtatcgtatccgtatcgtatctcgtatc 45216207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 37669626 - 37669683
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  37669626 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 37669683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 43770763 - 43770706
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  43770763 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 43770706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 3892479 - 3892551
Alignment:
Q  18 cgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||| |||||||||||||| |||||||||| |||||||||| |||||||| ||||||  ||||||||||    
T  3892479 cgtatcttaatttttgaaatttttccgtatcaacatatcggtgcaatatcgtattcgtatcaaatctcgtatc 3892551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 5540479 - 5540559
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||  | |||||||||    
T  5540479 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacagg 5540559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 32425421 - 32425496
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||    ||| ||||||||||| |||||||||||||||| |||||    
T  32425421 tatcgtatcttgatttttgaaatttttccgtatcggtatattggtgcagtatcatatccgtatcgtatcttgtatc 32425496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 33123 - 33192
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| | ||||||||||||||||| ||||||    
T  33123 atatcatattttgatttttgaaattttcccgtatcgtcgtatcagagcagtatcgtatccgtagcgtatc 33192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 5817933 - 5817867
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtat 89  Q
    ||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||    
T  5817933 tatcgtatcttgatttttgaaattttcccgtatc--------ggtgcagtattgtatccgtatcgtatctcgtat 5817867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 32638274 - 32638199
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||   |||||||||  ||||| ||| |||||| |||||||||||    
T  32638274 tatcgtatcttgatttttgaaatttttccgtatcggtgtatcggtgttgtatcatattcgtatcttatctcgtatc 32638199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 12579589 - 12579522
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||        |||||||||| |||||||||||||||||||||||    
T  12579589 tatcgtatcttgatttttgaaatttttccgtatc--------ggtgcagtattgtatccgtatcgtatctcgtatc 12579522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 32760441 - 32760481
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  32760441 cgtatcgatgcagtatcgtatccgtatcgtatctcgtatct 32760481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 17702914 - 17702982
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    ||||||||||||| |||| |||||||| | |||| ||||||| |||  |||||||||| ||||||||||    
T  17702914 tatcgtatcttgaattttaaaattttctcatatcgacgtatcagtgttgtatcgtatctgtatcgtatc 17702982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 7412948 - 7413043
Alignment:
Q  9 caacaatatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    ||||| ||| ||||||| ||||||||| |||| ||||||| | |||| | |||||||||||||||  ||||||| || ||||  ||||||| ||||    
T  7412948 caacagtattgtatcttaatttttgaattttttccgtatcgaagtattgatgcagtatcgtatccacatcgtatgtcatatccggacttcataggt 7413043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 38389211 - 38389250
Alignment:
Q  18 cgtatcttgatttttgaaattttcccgtatcaacgtatcg 57  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  38389211 cgtatcttgatttttgaaatttttccatatcaacgtatcg 38389250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 8170562 - 8170512
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcaca 101  Q
    ||||||| ||||||||||||||||||| ||||||| ||||  |||||||||    
T  8170562 cgtatcgatgcagtatcgtatccgtattgtatctcctatccggacttcaca 8170512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 30804311 - 30804254
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||| |||| || ||||||| ||||| ||||||||| | ||||||||||    
T  30804311 tatcgtatcttgaattttaaagttttcccatatcagcgtatcggtaccgtatcgtatc 30804254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 41098521 - 41098489
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtat 47  Q
    |||||||||||||||||||||||||| ||||||    
T  41098521 tatcgtatcttgatttttgaaatttttccgtat 41098489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 234833 - 234919
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| || |||||||    
T  234833 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcaatgcagtatcgtatccgtatcgtatctcgtatccaggcttcaca 234919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 1035876 - 1035801
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1035876 tatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 1035801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19128672 - 19128747
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  19128672 tatcttatcttgatttttgaaattttcacgtatcaacgtatcagtgtagtatcgtatccgtatcgtatctcgtatc 19128747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 31187014 - 31186939
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  31187014 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcatatc 31186939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 32018713 - 32018800
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||||||||||| || |||||||    
T  32018713 tatcgtattttgatttttgaaatttttccgtatctacgtattggtgcattatcgtatccgtatcgtatctcgtatctggatttcacag 32018800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 31738228 - 31738141
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    ||||||||||||||||||||||||||| ||||||   |||||||||||||||||||| ||||| |||||||||||| || ||||||||    
T  31738228 tatcgtatcttgatttttgaaattttcacgtatcggtgtatcggtgcagtatcgtattcgtattgtatctcgtatccaggcttcacag 31738141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 13607356 - 13607299
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  13607356 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 13607299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 3213202 - 3213259
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  3213202 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatc 3213259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 32130119 - 32130062
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  32130119 tatcgtatcttgatttttgaaattttccgatatcaacgtatcggtgtagtatcgtatc 32130062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 4153140 - 4153065
Alignment:
Q  16 atcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    |||||||||| |||||||||| ||| | ||||||  ||||||||||||||||||| | ||||||||||||||||||    
T  4153140 atcgtatcttaatttttgaaaattttctgtatcagtgtatcggtgcagtatcgtacctgtatcgtatctcgtatct 4153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 7187811 - 7187772
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7187811 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 7187772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 6707556 - 6707503
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||||||||||    
T  6707556 cgtatcggtgcaatatcgtatccgtatcgtatctcgtatccgggcttcacaggt 6707503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 7255457 - 7255520
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatc 78  Q
    |||||||| || |||||||||||||| | ||||  |||||||||||||||||||||| ||||||    
T  7255457 tatcgtattttaatttttgaaatttttctgtatagacgtatcggtgcagtatcgtattcgtatc 7255520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 10893782 - 10893749
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    ||||||||||||||||||||||||||||||||||    
T  10893782 tatcgtatcttgatttttgaaattttcccgtatc 10893749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 13060949 - 13060896
Alignment:
Q  19 gtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||| |||||||| || |||| |||||||||||||||||| ||||    
T  13060949 gtatcttgattttcgaaatttttccatatcgacgtatcggtgcagtatcatatc 13060896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 3299968 - 3300023
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgta 70  Q
    ||||||||||| |||||| ||||||| || |||||||||||| || ||||||||||    
T  3299968 tatcgtatcttaatttttaaaatttttccatatcaacgtatcagtacagtatcgta 3300023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 8357939 - 8357994
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatc 78  Q
    |||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||    
T  8357939 tatcgtatcttgatttttgaaatttttc--------cgtatcggtgcagtatcgtatccgtatc 8357994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 13044960 - 13044903
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||| |||| |||  | |||| |||||||||||||||||| ||||    
T  13044960 tatcgtatcttgattttcgaaaatttttcatatcgacgtatcggtgcagtatcatatc 13044903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 26327861 - 26327894
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  26327861 tatcgtatcttgatttttgaaatttttccgtatc 26327894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 5371619 - 5371705
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcaca 101  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  5371619 tatcgtatcttgatttttgaaattttcccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcatatccagacttcaca 5371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 28746259 - 28746170
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||  | ||||||||||    
T  28746259 tatcgtatcttgatttttgaaattttcccgtatcggcgtatcagtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacaggt 28746170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6496732 - 6496648
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  6496732 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatccgtatcgtatctcgtatatggacttca 6496648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 10574019 - 10574107
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  | |||||||||    
T  10574019 tatcatatcttgatttttgaaattttcccgtatcagcgtatcggtgcagtatcatatccgtatcgtatctcgtatccgggcttcacagg 10574107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 12819863 - 12819930
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12819863 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagta-cgtatccgtatcgtatc 12819930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 7877181 - 7877256
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||    
T  7877181 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtgtcgtatccgtatcgtatctcgtatc 7877256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 14216835 - 14216760
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||||||||||||||||||||||| |||||  | ||||||||| |||||||||||||||||||||||||||||    
T  14216835 tatcgtatcttgatttttgaaattttctcgtattgatgtatcggtgtagtatcgtatccgtatcgtatctcgtatc 14216760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 3564361 - 3564418
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3564361 tatcgtatcttgatttttgaaattttctcgtatcaacgtatcggtgcagtatcgtatc 3564418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 4562307 - 4562396
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacaggt 104  Q
    |||||||||||||||||||||||||| || |||| ||||||||||| ||||||||||||||||| ||||| |||||  | ||||||||||    
T  4562307 tatcgtatcttgatttttgaaatttttccatatcgacgtatcggtgtagtatcgtatccgtatcatatcttgtatccgggcttcacaggt 4562396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 40431616 - 40431532
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||||  ||||||||| ||||||||||||  |||||||    
T  40431616 tatcgtatcttgatttttaaaatttttccgtatcgacgtatcggtgcagtattatatccgtattgtatctcgtatccggacttca 40431532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 12206688 - 12206759
Alignment:
Q  19 gtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  12206688 gtatcttaatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcatatcttgtatc 12206759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 4169580 - 4169523
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  4169580 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 4169523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 18301604 - 18301661
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18301604 tatcgtatcttgatttttgaaattttcccgtatcgacatatcggtgcagtatcgtatc 18301661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 8482513 - 8482429
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||| ||||||||||||||||||||||||||||| || |||||||| | |||||||||| ||||||||||| |||| || |||||    
T  8482513 tatcctatcttgatttttgaaattttcccgtatcgacatatcggtgtaatatcgtatccatatcgtatctcttatccaggcttca 8482429  T

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Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 37354559 - 37354492
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtat 82  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| | ||||||    
T  37354559 tatcgtatcttgaattttaaagttttcccgtatcaacgtatcggtgcagtatcgtatccatttcgtat 37354492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 6125229 - 6125308
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||| || ||||||||    
T  6125229 tatcgtatcttgatttttgaaatttttccgta--------tcggtgcagtatcgtatccgtatcgtatctcgtatccaggcttcacag 6125308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 34146720 - 34146789
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatct 91  Q
    |||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||||||||    
T  34146720 tatcgtatcttgatttttgaaatttttccgt-------tatcggtgcagtatcgtatccgtatcgtatctcgtatct 34146789  T

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Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 1006039 - 1006087
Alignment:
Q  24 ttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1006039 ttgatttttgaaattttcacgtatcaacgtatcggtgcagtatcgtatc 1006087  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 3545161 - 3545090
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcg 86  Q
    ||||||||||||| ||||||||||||    ||||||| ||| ||||||||||||||||||||||||||||||    
T  3545161 tatcgtatcttgagttttgaaatttttttatatcaacatattggtgcagtatcgtatccgtatcgtatctcg 3545090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 7806919 - 7806839
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||  | |||||||||    
T  7806919 tatcgtatcttgatttttgaaattttcccgtatc--------ggtgcagtatcgtattcgtatcgtatctcgtatccgggcttcacagg 7806839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 16562275 - 16562333
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||    
T  16562275 atatcgtatcttgatttttgaaatttttccgtattggcgtatcggtgcagtatcgtatc 16562333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 20537384 - 20537442
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    ||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||    
T  20537384 atatcgtattttgatttttgaaattttcccgtatcggcgtatcagtgcagtatcgtatc 20537442  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 22571466 - 22571523
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||    
T  22571466 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcagtgcagtatcgtatc 22571523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 5588560 - 5588644
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||| |||||||||||| ||||||||||  ||| ||  |||||||||||||||||||| |||||||||||| ||||  |||||||    
T  5588560 tatcatatcttgattttggaaattttccaatattaatatatcggtgcagtatcgtatctgtatcgtatctcatatccggacttca 5588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 24586046 - 24586110
Alignment:
Q  8 ccaacaatatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||||| |||||||||| ||||||||||||||| |||||||| | ||||||||||||||| ||||    
T  24586046 ccaacagtatcgtatctcgatttttgaaatttttccgtatcagcatatcggtgcagtatcatatc 24586110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 33737501 - 33737437
Alignment:
Q  19 gtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    ||||||||| |||| ||||||||||||||| |||||||||||  ||||||||||||| |||||||    
T  33737501 gtatcttgaattttaaaattttcccgtatcgacgtatcggtggcgtatcgtatccgtgtcgtatc 33737437  T

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Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 40536734 - 40536818
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    ||||||||||||||||||||||||||  ||||||  |||||| |||| |||||| ||| ||||||||||| |||||  |||||||    
T  40536734 tatcgtatcttgatttttgaaattttttcgtatcggcgtatcagtgccgtatcgaatctgtatcgtatcttgtatccggacttca 40536818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 35342856 - 35342946
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatc------ggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    |||||||||||||||||||||||||| |||||||  ||||||      ||||||||||| |||| |||||||||||||||||  |||||||    
T  35342856 tatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcaggtgcagtatcatatctgtatcgtatctcgtatccggacttca 35342946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35997048 - 35997123
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||| |||||||||  ||| ||||  ||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  35997048 tatcgtaccttgattttaaaaaatttcttgtatcgacgtatcggtgcagtatcgtatccgtttcgtatctcatatc 35997123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 44157114 - 44157165
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtat 66  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  44157114 tatcgtatcttgatttttgaaatttttctgtatcgacgtatcggtgcagtat 44157165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 4356414 - 4356453
Alignment:
Q  51 cgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  4356414 cgtatcgatgcagtatcgtatccgtatcgtatctcgtatc 4356453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 22485327 - 22485394
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||| ||||||||||    
T  22485327 tatcgtatcttgatttttgaaatttctccgtatca--------gtgcagtatcgtatccgtatcgcatctcgtatc 22485394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 2319813 - 2319870
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 72  Q
    |||| |||||||||||||||||||||  |||||| |||||||  ||||||||||||||    
T  2319813 tatcatatcttgatttttgaaattttttcgtatcgacgtatcaatgcagtatcgtatc 2319870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 45157143 - 45157074
Alignment:
Q  14 atatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    |||||||||||||| |||||||| ||||||||||   | ||||||||  ||||||||||||| |||||||    
T  45157143 atatcgtatcttgaattttgaaaatttcccgtattggcatatcggtgtcgtatcgtatccgtgtcgtatc 45157074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 43215116 - 43215182
Alignment:
Q  7 tccaacaatatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatcc 73  Q
    |||||| |||||||||||| | |||| |||||||||| |||||||||||| |||  |||| ||||||    
T  43215116 tccaaccatatcgtatcttaaattttaaaattttcccatatcaacgtatcagtgttgtattgtatcc 43215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 40307897 - 40307864
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatc 48  Q
    |||||||||||||||||||||||||| |||||||    
T  40307897 tatcgtatcttgatttttgaaatttttccgtatc 40307864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 13995287 - 13995259
Alignment:
Q  22 tcttgatttttgaaattttcccgtatcaa 50  Q
    |||||||||||||||||||||||||||||    
T  13995287 tcttgatttttgaaattttcccgtatcaa 13995259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 24957 - 24882
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24957 tatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 5046 - 4978
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatc 83  Q
    ||||||||||||| |||| ||||||||| ||||| |||||||| ||||||||||||||| |||||||||    
T  5046 tatcgtatcttgaattttaaaattttcctgtatcgacgtatcgatgcagtatcgtatccctatcgtatc 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 7496 - 7416
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacagg 103  Q
    |||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||  | |||||||||    
T  7496 tatcgtatcttgatttttgaaatttttccgtatc--------ggtgcagtatcgtatccgtatcgtatctcgtatccgggcttcacagg 7416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 43635 - 43585
Alignment:
Q  52 gtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttcacag 102  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  43635 gtatcggtgcagtatcgtatccgtatcgtatctcgtatctgggcttcacag 43585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 29704 - 29637
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatc 90  Q
    |||||||||||||||||||||||||| |||||||        ||| ||||||||||||||||||||||||||||||    
T  29704 tatcgtatcttgatttttgaaatttttccgtatc--------ggtacagtatcgtatccgtatcgtatctcgtatc 29637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 11138 - 11222
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatccgtatcgtatctcgtatctagacttca 99  Q
    ||||||||||||| |||| |||||||||| ||||  | |||| |||| |||||||||| ||||| ||||  |||||||| |||||    
T  11138 tatcgtatcttgaattttaaaattttcccttatcggcatatcagtgccgtatcgtatcagtatcatatcatgtatctaggcttca 11222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 13937 - 13969
Alignment:
Q  15 tatcgtatcttgatttttgaaattttcccgtat 47  Q
    |||||||||||||||||||||||||| ||||||    
T  13937 tatcgtatcttgatttttgaaatttttccgtat 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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