View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0951_low_47 (Length: 241)
Name: NF0951_low_47
Description: NF0951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0951_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 24636663 - 24636889
Alignment:
| Q |
1 |
attatttttaccatgctaactaattgtacggatgtaattttcctgttgttggaaaataagtttgtttctctccttccatat--ataaacaattgttaacc |
98 |
Q |
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| T |
24636663 |
attatttttaccatgctaactaattgaacggatgtaattttccttttgttggaaaataagtttgtttctctccttccatatatataaacagttgttaacc |
24636762 |
T |
|
| Q |
99 |
aaagtattttgagtgctaaatttaatttatttgaaaaacctttcaaatcacaatgtaaagagttgaaattatggactgcccagcattcattcacacatca |
198 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
24636763 |
aaattattttgagtgctaaatttaatttatttgaaaaacctttcaaatcacaatgtaaagagttgaaattatggactgcccagtattcattcacacatca |
24636862 |
T |
|
| Q |
199 |
gaatgatgcctgatctaagtttgactt |
225 |
Q |
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||||||||||||||||||||||||||| |
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| T |
24636863 |
gaatgatgcctgatctaagtttgactt |
24636889 |
T |
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