View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0951_low_6 (Length: 464)
Name: NF0951_low_6
Description: NF0951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0951_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 9 - 436
Target Start/End: Complemental strand, 36374263 - 36373824
Alignment:
| Q |
9 |
agcagagacaggcaacctgttagctaccaccaacaaacgttgtttgcgaggcctatcatccgcaaacaacgtttccgctacctcttcctcattatcattc |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
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| T |
36374263 |
agcagagacaggcaacctgttagctaccaccaacaaacgttgtttgcgaggcctatcatccgcaaacaacgtttccgcgacctcttcctcattgtcattc |
36374164 |
T |
|
| Q |
109 |
tcatttatgaatgaatcactgtaaagttgctctccctctttgccaccatctcttccgtcctcggccgattgagtataccggctcgatttccttagctctc |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
36374163 |
tcatttatgaatgaatcactgtaaagttgctctccctctttgccaccatctcttccgtcctcggccgattgagtataccggctcgatttccttagttctc |
36374064 |
T |
|
| Q |
209 |
tttctctcaaaagcctttccaatctcgacctcggtgttaaaggaagactgtgattgttcccctgcatacgcctgacctgaaattttccattatttgaact |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36374063 |
tttctctcaaaagcctttccaatctcgacctcggtgttaaaggaagactgtgattgttcccctgcatacgcctgacctgaaattttccattatttgaact |
36373964 |
T |
|
| Q |
309 |
tattttacagtccagtacaaaataacagtcgataatgttcaatctatgaagcact------------gacacagacgtcagacacaatactggtacaaat |
396 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |
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| T |
36373963 |
tattttacagtccagtacaaaataacagtcgataatgtttaatctatgaagcactgacagagacactgacacagacgtcagacacaatattggtacaaat |
36373864 |
T |
|
| Q |
397 |
tttgaaaaattgaagtaatcacacgtgccgtgtccgtgct |
436 |
Q |
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|||||||||||||||||||||||| ||||||||||||||| |
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| T |
36373863 |
tttgaaaaattgaagtaatcacacttgccgtgtccgtgct |
36373824 |
T |
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