View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0951_low_8 (Length: 428)
Name: NF0951_low_8
Description: NF0951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0951_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 87 - 416
Target Start/End: Complemental strand, 26578537 - 26578209
Alignment:
| Q |
87 |
tctcacaaacctttatgactcactgtattaatccatccatatttaaacaaatttttctttatatgtataaagttaattattaaaatgtacaaactatgtg |
186 |
Q |
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| T |
26578537 |
tctcacaaacctttatgactcactgtattaatccatccatatttaaacaaatttttctttatatatataaagttaattattaaaatgtacaaactatgtg |
26578438 |
T |
|
| Q |
187 |
aacatttatttccatttcaaatttgtctataatactatgannnnnnnnnaatgattgtatataatgaaatgtaacagatggagatgagaatttcatgtcc |
286 |
Q |
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| T |
26578437 |
aacatttatttccatttcaaatttgtctataatactatgatttttttt-aatgattatatataatgaaatgtaacagatggagatgagaatttcatgtcc |
26578339 |
T |
|
| Q |
287 |
ctaacacaacctcatgatcaaaataagaactataatgcatctctagatcatgatattggctacacttccaacactctatgggctaattcttcttcaaggt |
386 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578338 |
ctaacacaacctcatgatcaaaataagaactataatgcatctctagaacatgatattggctacacttccaacactctatgggctaattcttcttcaaggt |
26578239 |
T |
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| Q |
387 |
accannnnnnnaatttcttggtttaatatt |
416 |
Q |
| |
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|||| ||||||||||||||||||| |
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| T |
26578238 |
accatttttttaatttcttggtttaatatt |
26578209 |
T |
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