View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0952_low_32 (Length: 232)
Name: NF0952_low_32
Description: NF0952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0952_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 7352102 - 7352195
Alignment:
| Q |
1 |
caaaacccatccagacataaacttttcaagaattatgaaattagtcaaatactggttgccggctagagttttgta-ataaccctatcacattcttc |
95 |
Q |
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| T |
7352102 |
caaaacccatccagacataaacttt-caagaattatgaaattagtcaaatattggttgccggctagagttttgtatataa-cctatcacattcttc |
7352195 |
T |
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