View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0953_high_66 (Length: 253)

Name: NF0953_high_66
Description: NF0953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0953_high_66
NF0953_high_66
[»] chr7 (29 HSPs)
chr7 (1-242)||(41189527-41189758)
chr7 (156-242)||(30941386-30941473)
chr7 (156-201)||(2362664-2362709)
chr7 (156-242)||(38956602-38956687)
chr7 (154-242)||(44895556-44895645)
chr7 (155-242)||(13152592-13152680)
chr7 (146-201)||(25192910-25192965)
chr7 (156-242)||(44189294-44189381)
chr7 (154-198)||(22918470-22918514)
chr7 (210-242)||(43942692-43942724)
chr7 (164-242)||(38073204-38073283)
chr7 (154-197)||(40112984-40113027)
chr7 (164-242)||(43025348-43025427)
chr7 (146-242)||(34978286-34978384)
chr7 (156-201)||(43159600-43159646)
chr7 (181-242)||(4292454-4292515)
chr7 (153-201)||(33845039-33845088)
chr7 (156-201)||(38861096-38861141)
chr7 (154-201)||(12007211-12007259)
chr7 (210-242)||(22541009-22541041)
chr7 (210-242)||(24532926-24532958)
chr7 (210-242)||(31445373-31445405)
chr7 (210-242)||(34507189-34507221)
chr7 (210-242)||(36703855-36703887)
chr7 (154-197)||(37352108-37352152)
chr7 (210-242)||(40854638-40854670)
chr7 (210-242)||(41018719-41018751)
chr7 (154-201)||(47448824-47448872)
chr7 (210-242)||(48145580-48145612)
[»] chr4 (41 HSPs)
chr4 (155-242)||(29175226-29175314)
chr4 (156-242)||(37997256-37997341)
chr4 (152-242)||(38134349-38134440)
chr4 (154-242)||(37297047-37297136)
chr4 (151-242)||(43174979-43175071)
chr4 (156-242)||(5622458-5622545)
chr4 (156-242)||(10250499-10250586)
chr4 (154-242)||(23369316-23369405)
chr4 (155-242)||(40348793-40348881)
chr4 (154-201)||(39478433-39478480)
chr4 (156-238)||(46634100-46634183)
chr4 (166-240)||(53801743-53801818)
chr4 (154-243)||(46212968-46213058)
chr4 (153-240)||(27051072-27051160)
chr4 (154-197)||(44539734-44539777)
chr4 (155-201)||(26910202-26910247)
chr4 (156-242)||(11068690-11068775)
chr4 (156-197)||(39440484-39440525)
chr4 (210-242)||(2109487-2109519)
chr4 (149-200)||(3316343-3316395)
chr4 (210-242)||(5249924-5249956)
chr4 (210-242)||(7632445-7632477)
chr4 (210-242)||(16019532-16019564)
chr4 (210-242)||(19232117-19232149)
chr4 (210-242)||(24509371-24509403)
chr4 (210-242)||(25123255-25123287)
chr4 (210-242)||(26732280-26732312)
chr4 (210-242)||(31559594-31559626)
chr4 (152-192)||(32079123-32079163)
chr4 (155-195)||(36177905-36177945)
chr4 (210-242)||(36177961-36177993)
chr4 (157-201)||(39731912-39731956)
chr4 (210-242)||(42490964-42490996)
chr4 (210-242)||(44257713-44257745)
chr4 (210-242)||(49585050-49585082)
chr4 (210-242)||(50721728-50721760)
chr4 (154-201)||(51255744-51255792)
chr4 (210-242)||(51930882-51930914)
chr4 (210-238)||(51986097-51986125)
chr4 (210-242)||(54000754-54000786)
chr4 (153-201)||(55609191-55609239)
[»] chr3 (43 HSPs)
chr3 (150-242)||(52326013-52326106)
chr3 (155-242)||(36670998-36671086)
chr3 (151-242)||(42358622-42358714)
chr3 (156-242)||(26014812-26014899)
chr3 (155-242)||(52939652-52939738)
chr3 (154-242)||(5114076-5114165)
chr3 (155-242)||(38926627-38926715)
chr3 (157-243)||(47472330-47472417)
chr3 (157-242)||(44855954-44856040)
chr3 (158-242)||(33939238-33939323)
chr3 (155-242)||(27541486-27541574)
chr3 (157-240)||(44413906-44413990)
chr3 (156-242)||(5244229-5244316)
chr3 (157-242)||(35597163-35597249)
chr3 (157-240)||(42357068-42357150)
chr3 (155-201)||(46623906-46623952)
chr3 (152-201)||(13735125-13735174)
chr3 (156-201)||(37503773-37503818)
chr3 (158-242)||(45711423-45711508)
chr3 (152-242)||(34456786-34456878)
chr3 (156-200)||(38671618-38671662)
chr3 (210-242)||(41505546-41505578)
chr3 (211-242)||(7668171-7668202)
chr3 (156-242)||(37302546-37302633)
chr3 (210-240)||(19149045-19149075)
chr3 (210-240)||(44413381-44413411)
chr3 (153-201)||(27168707-27168756)
chr3 (210-242)||(288781-288813)
chr3 (210-242)||(6093862-6093894)
chr3 (210-242)||(6178409-6178441)
chr3 (153-201)||(16479629-16479677)
chr3 (210-238)||(16969554-16969582)
chr3 (210-242)||(20547974-20548006)
chr3 (210-242)||(26452706-26452738)
chr3 (156-200)||(28539767-28539811)
chr3 (210-242)||(28700516-28700548)
chr3 (210-242)||(39629822-39629854)
chr3 (153-200)||(40367605-40367653)
chr3 (157-201)||(41308926-41308970)
chr3 (155-199)||(44813133-44813177)
chr3 (210-242)||(48405466-48405498)
chr3 (210-242)||(50314680-50314712)
chr3 (210-242)||(55322700-55322732)
[»] chr6 (17 HSPs)
chr6 (147-242)||(25811822-25811918)
chr6 (156-242)||(8098581-8098666)
chr6 (153-197)||(5694181-5694225)
chr6 (154-242)||(22079547-22079636)
chr6 (154-242)||(1156719-1156807)
chr6 (152-200)||(5570360-5570408)
chr6 (156-201)||(14817932-14817977)
chr6 (156-201)||(34047387-34047432)
chr6 (155-242)||(552792-552880)
chr6 (159-242)||(5080551-5080635)
chr6 (152-242)||(8645305-8645396)
chr6 (152-201)||(2242047-2242097)
chr6 (146-243)||(9083044-9083142)
chr6 (210-242)||(10335606-10335638)
chr6 (210-242)||(13423024-13423056)
chr6 (210-242)||(26595404-26595436)
chr6 (210-242)||(32316912-32316944)
[»] chr2 (22 HSPs)
chr2 (155-242)||(18254193-18254281)
chr2 (156-242)||(9760017-9760105)
chr2 (155-242)||(41042253-41042341)
chr2 (155-242)||(9207589-9207677)
chr2 (156-242)||(22888805-22888892)
chr2 (154-201)||(43487377-43487424)
chr2 (154-242)||(9194239-9194328)
chr2 (155-238)||(6511250-6511334)
chr2 (153-201)||(27490756-27490804)
chr2 (211-242)||(9990747-9990778)
chr2 (157-242)||(34945074-34945160)
chr2 (147-240)||(42421884-42421978)
chr2 (210-243)||(14328437-14328470)
chr2 (153-234)||(17388590-17388669)
chr2 (211-240)||(32477388-32477417)
chr2 (158-242)||(41195586-41195671)
chr2 (153-201)||(7648389-7648437)
chr2 (210-242)||(9647187-9647219)
chr2 (210-242)||(10472131-10472163)
chr2 (157-197)||(19109123-19109163)
chr2 (210-242)||(22416268-22416300)
chr2 (210-242)||(29449267-29449299)
[»] chr8 (21 HSPs)
chr8 (153-242)||(10692436-10692526)
chr8 (156-242)||(27325758-27325845)
chr8 (156-242)||(31249508-31249595)
chr8 (150-242)||(36660434-36660527)
chr8 (154-242)||(37449409-37449498)
chr8 (155-242)||(12898913-12899001)
chr8 (156-242)||(22719440-22719527)
chr8 (210-242)||(5277483-5277515)
chr8 (155-242)||(36816600-36816688)
chr8 (152-242)||(45405527-45405619)
chr8 (156-242)||(10902705-10902792)
chr8 (156-238)||(43397781-43397864)
chr8 (153-197)||(28772153-28772198)
chr8 (154-242)||(43715873-43715962)
chr8 (210-242)||(5740769-5740801)
chr8 (150-201)||(5771997-5772049)
chr8 (210-242)||(25830229-25830261)
chr8 (153-197)||(34810671-34810715)
chr8 (210-242)||(35067216-35067248)
chr8 (210-242)||(41639783-41639815)
chr8 (142-201)||(41955916-41955975)
[»] chr1 (35 HSPs)
chr1 (153-242)||(2571632-2571721)
chr1 (154-242)||(33100806-33100895)
chr1 (156-240)||(37685331-37685416)
chr1 (156-240)||(37700102-37700187)
chr1 (153-240)||(8350182-8350270)
chr1 (154-242)||(35369698-35369787)
chr1 (156-242)||(649768-649856)
chr1 (159-242)||(30735277-30735361)
chr1 (155-242)||(49065348-49065436)
chr1 (156-242)||(23645411-23645498)
chr1 (153-242)||(31088178-31088268)
chr1 (156-201)||(3159376-3159421)
chr1 (154-238)||(12657220-12657305)
chr1 (150-242)||(37619538-37619631)
chr1 (152-242)||(9987947-9988039)
chr1 (155-242)||(44519135-44519223)
chr1 (154-201)||(3982057-3982104)
chr1 (156-242)||(27465041-27465128)
chr1 (156-242)||(37275017-37275104)
chr1 (154-200)||(15083077-15083123)
chr1 (210-240)||(29359694-29359724)
chr1 (153-242)||(44914556-44914646)
chr1 (155-201)||(45333569-45333615)
chr1 (146-242)||(43775196-43775293)
chr1 (153-201)||(48983693-48983742)
chr1 (210-242)||(740939-740971)
chr1 (210-242)||(5771731-5771763)
chr1 (210-242)||(11597692-11597724)
chr1 (210-242)||(15470040-15470072)
chr1 (154-201)||(24806247-24806295)
chr1 (210-242)||(36954713-36954745)
chr1 (210-242)||(48261195-48261227)
chr1 (210-242)||(48470694-48470726)
chr1 (210-242)||(49660235-49660267)
chr1 (210-242)||(51718610-51718642)
[»] chr5 (23 HSPs)
chr5 (159-242)||(19521987-19522071)
chr5 (156-239)||(22649648-22649732)
chr5 (152-242)||(26791228-26791319)
chr5 (156-242)||(28306116-28306203)
chr5 (152-242)||(41321252-41321342)
chr5 (156-239)||(5721804-5721888)
chr5 (155-242)||(33037519-33037607)
chr5 (159-242)||(36738951-36739035)
chr5 (147-201)||(39807740-39807794)
chr5 (154-242)||(1274356-1274445)
chr5 (154-242)||(18660757-18660846)
chr5 (210-242)||(5168238-5168270)
chr5 (153-201)||(14051342-14051390)
chr5 (154-201)||(1079978-1080025)
chr5 (152-201)||(6758816-6758866)
chr5 (154-200)||(7076595-7076641)
chr5 (146-193)||(4434472-4434520)
chr5 (210-242)||(7287173-7287205)
chr5 (154-201)||(13089807-13089855)
chr5 (152-188)||(14923079-14923115)
chr5 (210-242)||(22098311-22098343)
chr5 (210-242)||(33958243-33958275)
chr5 (210-242)||(35649971-35650003)
[»] scaffold0067 (1 HSPs)
scaffold0067 (152-242)||(35519-35608)
[»] scaffold0098 (1 HSPs)
scaffold0098 (154-242)||(49293-49382)
[»] scaffold0056 (1 HSPs)
scaffold0056 (155-242)||(76603-76691)
[»] scaffold0041 (1 HSPs)
scaffold0041 (210-242)||(10947-10979)
[»] scaffold0034 (1 HSPs)
scaffold0034 (154-201)||(101931-101979)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 41189758 - 41189527
Alignment:
Q  1 ttatatgttgaggcaactcacaataagctggaatattctttaacttgattaattaaatgctcctttttggtgatggtgaaagaaattgcatatattatat 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41189758 ttatatgttgaggcaactcacaataagctggaatattccttaacttgattaattaaatgctcctttttggtgatggtgaaagaaattgcatatattatat 41189659  T
Q  101 tgctaacaatcttaatataggatcaatttattatgaaattgcataatttataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaa 200  Q
    ||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  41189658 tgctaacaatcttaatataggatc-----------aaattgcataatttataaaagagaaatgatatatgaacaaccattttttataatttttgtgacaa 41189570  T
Q  201 c-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |         |||||||||||||||||||||||||||||||||    
T  41189569 ctttctttctcatactcacattatctttttactttctctctct 41189527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 30941386 - 30941473
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  30941386 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 30941473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 2362664 - 2362709
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  2362664 gagaaatgatatatgaacaaccattttttacaacttttgtgacaac 2362709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 38956687 - 38956602
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| | || ||||||||||||||| ||| ||||||||        |||||||||||||||||||||||||||||||||    
T  38956687 gagaaatgatatttaaacaaccattttttacaactttagtgacaactttctct-catactcacattatctttttactttctctctct 38956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 44895645 - 44895556
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||         |||| |||| |||||||||||||||||||||||    
T  44895645 aagagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctatctcatattcacgttatctttttactttctctctct 44895556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 13152592 - 13152680
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||||||         ||||||||||||||| |||||||||||||||||    
T  13152592 agagaaatgatatttgaacaaccatttttgacaacttttgtgacaactttctctctcatactcacattatccttttactttctctctct 13152680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 25192965 - 25192910
Alignment:
Q  146 atttataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||| |||||||||||||||| |||| ||||||||||||||| |||||| |||||    
T  25192965 atttaaaaaagagaaatgatatttgaacaaccattttttacaacttttgtaacaac 25192910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 44189381 - 44189294
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| |||||||||||| || ||||||| ||||         |||||||||||||||||||||||||||||||||    
T  44189381 gagaaatgatatttgaacaaccattttttataacttttgtgtcaactttctctctcatactcacattatctttttactttctctctct 44189294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 22918514 - 22918470
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgac 198  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||    
T  22918514 aagagaaatgatatttgaacaaccattttttacaatttttatgac 22918470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 43942692 - 43942724
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||||||||||||||||||    
T  43942692 catactcacattatctttttactttctctctct 43942724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 38073204 - 38073283
Alignment:
Q  164 atatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||| ||||||||||||||| ||||||||||||         ||||||||||||||||||||| | |||||||||    
T  38073204 atatatgaacaaccattttttacaacttttgtgacaacttactctctcatactcacattatctttttattctctctctct 38073283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 40113027 - 40112984
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtga 197  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||    
T  40113027 aagagaaatgatatttgaacaactattttttacaatttttgtga 40112984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 43025348 - 43025427
Alignment:
Q  164 atatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||| |||| ||||||||||||||||||||||||||||         |||||||| |||||||||||||||| |||||||    
T  43025348 atatttgaacaaccattttttacaatttttgtgacaactttatctctcatactcatattatctttttactttttctctct 43025427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 34978286 - 34978384
Alignment:
Q  146 atttataaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||| |||| |||||||||||| |||| || || ||||| |||||||||||||||||         ||||||||||||||| |||||||||||||||||    
T  34978286 atttttaaatgagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacattatccttttactttctctctct 34978384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 43159646 - 43159600
Alignment:
Q  156 gagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||    
T  43159646 gagaaatgatatttgaacaaccattttttaacaatttttgtgacaac 43159600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 4292454 - 4292515
Alignment:
Q  181 ttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||| ||||||||||||        |||||||||||||| ||||||||||||||||||    
T  4292454 ttttacaacttttgtgacaacttctctctcatactcacattatgtttttactttctctctct 4292515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 33845039 - 33845088
Alignment:
Q  153 aaagagaaatgatatatgaataacca-ttttttacaatttttgtgacaac 201  Q
    ||||||||||||||| |||||||||| ||||| |||| ||||||||||||    
T  33845039 aaagagaaatgatatttgaataaccactttttgacaacttttgtgacaac 33845088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 38861096 - 38861141
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||| |||| || |||||||||||| ||||||||||||    
T  38861096 gagaaatgatatttgaacaatcattttttacaacttttgtgacaac 38861141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 12007259 - 12007211
Alignment:
Q  154 aagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  12007259 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaac 12007211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 22541041 - 22541009
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  22541041 catactcacattatatttttactttctctctct 22541009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 24532958 - 24532926
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  24532958 catactcacattatgtttttactttctctctct 24532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 31445373 - 31445405
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  31445373 catactcacattatatttttactttctctctct 31445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 34507221 - 34507189
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  34507221 catactcacattatatttttactttctctctct 34507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 36703887 - 36703855
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  36703887 catactcacattatttttttactttctctctct 36703855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 37352108 - 37352152
Alignment:
Q  154 aagagaaatgatatatgaataaccatttttt-acaatttttgtga 197  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||    
T  37352108 aagagaaatgatatttgaacaaccattttttgacaatttttgtga 37352152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 40854670 - 40854638
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  40854670 catactcacattatatttttactttctctctct 40854638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 41018719 - 41018751
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  41018719 catactcacattatatttttactttctctctct 41018751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 47448824 - 47448872
Alignment:
Q  154 aagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  47448824 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaac 47448872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 48145580 - 48145612
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  48145580 catactcacattatatttttactttctctctct 48145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 29175226 - 29175314
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||| || |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  29175226 agagaaatgatatatgaacaatcattttttacaatttttgtgacaactttttctctcatactcacattatctttttactttctctctct 29175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 37997256 - 37997341
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||    
T  37997256 gagaaatgatatttgaacaaccattttttacaacttttgtgacaac-tttctctcatactcacattatctttttactttctctctct 37997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 38134349 - 38134440
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||    
T  38134349 aaaagagaaatgatatttgaacaaccattttttacaatttttgtgacaactttctttctcatacttacattatctttttactttctttctct 38134440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 37297047 - 37297136
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaa-cnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||    
T  37297047 aagagaaatgatatttgaacaaccattttttacaacttttgtgacaattttctctctcatactcacattatctttttactttctctctct 37297136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 43174979 - 43175071
Alignment:
Q  151 taaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||| |||         |||||||||||||| ||||||||||||||||||    
T  43174979 taaaagagaaatgatatttgaacaaccattttttacaacttttgtgataactttctctctcatactcacattatttttttactttctctctct 43175071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 5622458 - 5622545
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         ||||||||||||||||||||||||| |||||||    
T  5622458 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctttcatactcacattatctttttactttttctctct 5622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 10250586 - 10250499
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  10250586 gagaaatgatatttgaacaactattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 10250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 23369405 - 23369316
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||         | ||||||||||||||||||||||| |||||||    
T  23369405 aagagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcttactcacattatctttttactttatctctct 23369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 40348793 - 40348881
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| || ||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||    
T  40348793 agagaaatgatatttgaacaatcattttttataatttttgtgacaattttctctctcatactcacattatctttttactttctctctct 40348881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 39478433 - 39478480
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  39478433 aagagaaatgatatatgaacaactattttttacaacttttgtgacaac 39478480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 46634100 - 46634183
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctct 238  Q
    |||||||||||| |||| || |||||||||||| ||||||||||||         |||||||||||||||||||||||||||||    
T  46634100 gagaaatgatatttgaacaatcattttttacaacttttgtgacaactttatctctcatactcacattatctttttactttctct 46634183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 53801818 - 53801743
Alignment:
Q  166 atatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctct 240  Q
    ||||||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||    
T  53801818 atatgaacaaccattttttacaacttttgtgacaactttttttttcatactcacattatctttttactttctctct 53801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 46212968 - 46213058
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctctg 243  Q
    |||||||||||||| |||| ||| |||||||| |||||||||||||||         | ||||||||||||||||||||||| ||||||||    
T  46212968 aagagaaatgatatttgaacaactattttttataatttttgtgacaactttttctctcgtactcacattatctttttactttttctctctg 46213058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 27051160 - 27051072
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctct 240  Q
    ||||||||||||||| | || |||||||||||| ||||||||||| |||         |||||||||||||||||||||| ||||||||    
T  27051160 aaagagaaatgatatttaaacaaccattttttataatttttgtgataactttctctctcatactcacattatctttttaccttctctct 27051072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 44539734 - 44539777
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtga 197  Q
    |||||||||||||| |||| |||||||||||| |||||||||||    
T  44539734 aagagaaatgatatttgaacaaccattttttataatttttgtga 44539777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 26910202 - 26910247
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  26910202 agagaaatgatatttgaa-aaccattttttacaacttttgtgacaac 26910247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 11068690 - 11068775
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||| ||||| |||| || |||||||||||| |||| |||||||        |||| ||||||||||||||||||||||||||||    
T  11068690 gagaaacgatatttgaacaatcattttttacaacttttttgacaactttctct-catattcacattatctttttactttctctctct 11068775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 39440484 - 39440525
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtga 197  Q
    |||||||||||| |||| ||||||||||||||| ||||||||    
T  39440484 gagaaatgatatttgaacaaccattttttacaacttttgtga 39440525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 2109487 - 2109519
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  2109487 catactcacattatgtttttactttctctctct 2109519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 3316343 - 3316395
Alignment:
Q  149 tataaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaa 200  Q
    ||||||||||||||||| | |||||||||||||||| |||| |||||| ||||    
T  3316343 tataaaagagaaatgatttttgaataaccattttttgacaacttttgtaacaa 3316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 5249924 - 5249956
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  5249924 catactcacattatgtttttactttctctctct 5249956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 7632477 - 7632445
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  7632477 catactcacattatatttttactttctctctct 7632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 16019532 - 16019564
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  16019532 catactcacattatatttttactttctctctct 16019564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 19232149 - 19232117
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  19232149 catactcacattatatttttactttctctctct 19232117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 24509403 - 24509371
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  24509403 catactcacattatttttttactttctctctct 24509371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 25123287 - 25123255
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||| ||||||||||||||||||||||||||||    
T  25123287 catagtcacattatctttttactttctctctct 25123255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 26732280 - 26732312
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||| |||||||||||    
T  26732280 catactcacattatctttttattttctctctct 26732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 31559594 - 31559626
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  31559594 catactcacattatatttttactttctctctct 31559626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 32079123 - 32079163
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttt 192  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  32079123 aaaagagaaatgatatttgtataaccattttgtacaatttt 32079163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 36177905 - 36177945
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgt 195  Q
    ||||||||||||| |||| ||||||||||||||| ||||||    
T  36177905 agagaaatgatatttgaacaaccattttttacaacttttgt 36177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 36177961 - 36177993
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||||||||| |||||    
T  36177961 catactcacattatctttttactttctttctct 36177993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 39731956 - 39731912
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||| || | |||||||||||| |||||||||||||||    
T  39731956 agaaatgatatttggacaaccattttttataatttttgtgacaac 39731912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 42490964 - 42490996
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  42490964 catactcacattatgtttttactttctctctct 42490996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 44257745 - 44257713
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  44257745 catactcacattatatttttactttctctctct 44257713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 49585050 - 49585082
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  49585050 catactcacattatatttttactttctctctct 49585082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 50721760 - 50721728
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  50721760 catactcacattatatttttactttctctctct 50721728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 51255744 - 51255792
Alignment:
Q  154 aagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  51255744 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaac 51255792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 51930882 - 51930914
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  51930882 catactcacattatatttttactttctctctct 51930914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 51986097 - 51986125
Alignment:
Q  210 catactcacattatctttttactttctct 238  Q
    |||||||||||||||||||||||||||||    
T  51986097 catactcacattatctttttactttctct 51986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 54000754 - 54000786
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||| |||||||||||||||||    
T  54000754 catactcacattatcattttactttctctctct 54000786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 55609239 - 55609191
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||| || | ||||||||| ||||| ||||||||||||    
T  55609239 aaagagaaatgatatttgtacaaccattttgtacaacttttgtgacaac 55609191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 52326013 - 52326106
Alignment:
Q  150 ataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||||         ||| |||||||||||||||||||||||||||||    
T  52326013 ataaaggagaaatgatatttgaataaccattttttacaacttttgtgacaactttctctctcatgctcacattatctttttactttctctctct 52326106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 36671086 - 36670998
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||    
T  36671086 agagaaatgatatttgaacaaccattttttacaatttttgtgacaactttttctctcatactcacattatctttttactttttctctct 36670998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 42358714 - 42358622
Alignment:
Q  151 taaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||         ||||||||||||||||||||||||| |||||||    
T  42358714 taaaagagaaatgatatacgaacaaccatttttgacaatttttgtgacaactttctctctcatactcacattatctttttactttatctctct 42358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 26014812 - 26014899
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  26014812 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 26014899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 52939652 - 52939738
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||        ||||||||||| |||||||||||||||||||||    
T  52939652 agagaaatgatatttgaacaaccattttttacaacttttgtgacaac-tttctctcatactcacatgatctttttactttctctctct 52939738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 5114076 - 5114165
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||||         || ||||||||||||||||||||||||||||||    
T  5114076 aagagaaatgatatttgaacaaccattttttacaatttttttgacaactttctctctcacactcacattatctttttactttctctctct 5114165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 38926627 - 38926715
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| |||||||||||||||  |||||||||||         |||||||||||||||||||||||||||||||||    
T  38926627 agagaaatgatatttgaacaaccattttttacaacgtttgtgacaactttctctctcatactcacattatctttttactttctctctct 38926715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 47472330 - 47472417
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctctg 243  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||| |||||||||||||||||||||||||    
T  47472330 agaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcatattatctttttactttctctctctg 47472417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 44855954 - 44856040
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||         ||||||||||||| |||||||||||||||||||    
T  44855954 agaaatgatatttgaataacaattttttacaacttttgtgacaactttctcactcatactcacattacctttttactttctctctct 44856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 33939238 - 33939323
Alignment:
Q  158 gaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||| |||| |||||||||||| |||||||||||||||         |||| ||||||||||||||||||||||||||||    
T  33939238 gaaatgatatttgaacaaccattttttataatttttgtgacaactttctctctcatattcacattatctttttactttctctctct 33939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 27541574 - 27541486
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||||||          |||||||||||||||||||||||||||||||||    
T  27541574 agagaaatgatatttgaacaaccattttttacaactttagtgacaattttctctctcatactcacattatctttttactttctctctct 27541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 44413990 - 44413906
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctct 240  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||         |||||||||||||||||||||| ||||||||    
T  44413990 agaaatgatatatgaacaacaattttttacaacttttgtgacaactttctctctcatactcacattatctttttaccttctctct 44413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 5244229 - 5244316
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| |||||| |||||||| ||||||||||||         |||||||||||||| ||||||||||||||||||    
T  5244229 gagaaatgatatttgaacaaccatattttacaacttttgtgacaactttctctctcatactcacattatttttttactttctctctct 5244316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 35597163 - 35597249
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||| |||| || |||||||||||||||| ||||||||         |||||||||||||| ||||||||||||||||||    
T  35597163 agaaatgatatttgaacaaacattttttacaattttagtgacaactttctctctcatactcacattatttttttactttctctctct 35597249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 42357150 - 42357068
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctct 240  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||        ||||||||||| ||||||||||| |||||||    
T  42357150 agaaatgatatttgaacaaccattttttacaacttttgtgacaac-tttctctcatactcacatgatctttttactctctctct 42357068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 46623906 - 46623952
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  46623906 agagaaatgatatttgaacaaccattttttacaacttttgtgacaac 46623952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 13735125 - 13735174
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||| |||||| |||| |||| ||||||||||||||||||||||||||||    
T  13735125 aaaatagaaataatatttgaacaaccattttttacaatttttgtgacaac 13735174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 37503818 - 37503773
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||    
T  37503818 gagaaatgatatttgaataatcattttttataatttttgtgacaac 37503773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 45711508 - 45711423
Alignment:
Q  158 gaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||| |||| ||| ||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||    
T  45711508 gaaatgatatttgaacaacaattttttacaacttttgtgacaattttctctctcatactcacattatctttttactttctctctct 45711423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 34456786 - 34456878
Alignment:
Q  152 aaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||| |||||||||| ||||| |||| |||||||| |||         |||||||| ||||||||||||||||||||||||    
T  34456786 aaaagagaaatgatatttgaataaccactttttgacaacttttgtgataactttctctctcatactcatattatctttttactttctctctct 34456878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 38671618 - 38671662
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaa 200  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||    
T  38671618 gagaaatgatatttgaacaaccattttttataatttttgtgacaa 38671662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 41505546 - 41505578
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||||||||||||||||||    
T  41505546 catactcacattatctttttactttctctctct 41505578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 242
Target Start/End: Complemental strand, 7668202 - 7668171
Alignment:
Q  211 atactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||||||||||||||    
T  7668202 atactcacattatctttttactttctctctct 7668171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 37302546 - 37302633
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| | || ||||||||||||||| ||||||||||||         |||| |||||||| |||||||||||||||||||    
T  37302546 gagaaatgatattttaacaaccattttttacaacttttgtgacaactttctctctcatattcacattacctttttactttctctctct 37302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 19149045 - 19149075
Alignment:
Q  210 catactcacattatctttttactttctctct 240  Q
    |||||||||||||||||||||||||||||||    
T  19149045 catactcacattatctttttactttctctct 19149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 44413411 - 44413381
Alignment:
Q  210 catactcacattatctttttactttctctct 240  Q
    |||||||||||||||||||||||||||||||    
T  44413411 catactcacattatctttttactttctctct 44413381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 27168756 - 27168707
Alignment:
Q  153 aaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    ||||||||||||||| |||| ||||||||||| | |||||||||||||||    
T  27168756 aaagagaaatgatatttgaacaaccattttttaataatttttgtgacaac 27168707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 288781 - 288813
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  288781 catactcacattatttttttactttctctctct 288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 6093894 - 6093862
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||| |||||||||||||||||||||||||    
T  6093894 catactcgcattatctttttactttctctctct 6093862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 6178441 - 6178409
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  6178441 catactcacattatgtttttactttctctctct 6178409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 16479629 - 16479677
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||| || | ||||||||| ||||| ||||||||||||    
T  16479629 aaagagaaatgatatttgtacaaccattttgtacaacttttgtgacaac 16479677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 16969582 - 16969554
Alignment:
Q  210 catactcacattatctttttactttctct 238  Q
    |||||||||||||||||||||||||||||    
T  16969582 catactcacattatctttttactttctct 16969554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 20548006 - 20547974
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||| |||||||||||||||||||||||    
T  20548006 catactcacgttatctttttactttctctctct 20547974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 26452738 - 26452706
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  26452738 catactcacattatatttttactttctctctct 26452706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 28539811 - 28539767
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaa 200  Q
    |||||||||||| |||| ||| |||||||| ||||||||||||||    
T  28539811 gagaaatgatatttgaacaactattttttataatttttgtgacaa 28539767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 28700516 - 28700548
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  28700516 catactcacattatgtttttactttctctctct 28700548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 39629854 - 39629822
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  39629854 catactcacattatgtttttactttctctctct 39629822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 40367605 - 40367653
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttt-tacaatttttgtgacaa 200  Q
    ||||||||||||||| |||||||| ||||||  ||||||||||||||||    
T  40367605 aaagagaaatgatatttgaataactatttttaaacaatttttgtgacaa 40367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 41308926 - 41308970
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||| |||| |||||||||||| || ||||||||||||    
T  41308926 agaaatgatatttgaacaaccattttttataacttttgtgacaac 41308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 44813133 - 44813177
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgaca 199  Q
    ||||||||||||| | || ||| ||||||||||||||||||||||    
T  44813133 agagaaatgatatttaaacaactattttttacaatttttgtgaca 44813177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 48405466 - 48405498
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  48405466 catactcacattatgtttttactttctctctct 48405498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 50314680 - 50314712
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  50314680 catactcacattatgtttttactttctctctct 50314712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 55322732 - 55322700
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  55322732 catactcacattatgtttttactttctctctct 55322700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 25811918 - 25811822
Alignment:
Q  147 tttataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||| ||| |||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  25811918 tttaaaaatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 25811822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 8098666 - 8098581
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||        |||||||||||| ||||||||||||||||||||    
T  8098666 gagaaatgatatttgaacaaccattttttacaacttttgtgacaac-tttctctcatactcacattttctttttactttctctctct 8098581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 5694225 - 5694181
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtga 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  5694225 aaagagaaatgatatttgaataaccattttttacaatttttgtga 5694181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 22079636 - 22079547
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||         || ||||||||||| ||||||||||||||||||    
T  22079636 aagagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcacactcacattatgtttttactttctctctct 22079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 1156719 - 1156807
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| ||||||||||||||| |||||||| ||          ||||||||||||| ||||||||||||||||||    
T  1156719 aagagaaatgatatttgaacaaccattttttacaacttttgtgataattttttttttatactcacattatttttttactttctctctct 1156807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 5570408 - 5570360
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaa 200  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  5570408 aaaaaagaaatgatatttgaacaaccattttttacaatttttgtgacaa 5570360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 14817932 - 14817977
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  14817932 gagaaatgatatttgaacaactattttttacaatttttgtgacaac 14817977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 34047387 - 34047432
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||    
T  34047387 gagaaatgatatttgaacaaccattttttacaacttttgtgacaac 34047432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 552792 - 552880
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| || |||||||||||| || |||||||||         |||| ||||||||||||||||||||||||||||    
T  552792 agagaaatgatatttgaacaaacattttttacaacttatgtgacaactttgtctctcatattcacattatctttttactttctctctct 552880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 5080635 - 5080551
Alignment:
Q  159 aaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||||         |||||||||||||| ||||||||||||||||||    
T  5080635 aaatgatatttgaacaaccactttttacaacttttgtgacaactttctctttcatactcacattatttttttactttctctctct 5080551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 8645305 - 8645396
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||| |||| |||  ||||| |||| ||||||||||||         ||||||||||||||| |||||||||||||||||    
T  8645305 aaaagagaaatgatatttgaacaacactttttgacaacttttgtgacaactttctctctcatactcacattatccttttactttctctctct 8645396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 2242097 - 2242047
Alignment:
Q  152 aaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||||| |||| || |||||||| |||||||||||||||||    
T  2242097 aaaagagaaatgatatttgaacaatcattttttgacaatttttgtgacaac 2242047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 9083142 - 9083044
Alignment:
Q  146 atttataaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctctg 243  Q
    |||||| ||||||||||||||| || ||||| ||||||| ||||||||||||| ||         ||||||||||||||  ||||||||||| ||||||    
T  9083142 atttattaaagagaaatgatatttgtataactattttttaacaatttttgtgataatttctctctcatactcacattataattttactttctttctctg 9083044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 10335606 - 10335638
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  10335606 catactcacattatttttttactttctctctct 10335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 13423024 - 13423056
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  13423024 catactcacattatatttttactttctctctct 13423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 26595404 - 26595436
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  26595404 catactcacattatgtttttactttctctctct 26595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 32316944 - 32316912
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||||||| |||||||    
T  32316944 catactcacattatctttttactttatctctct 32316912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 18254281 - 18254193
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  18254281 agagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 18254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 9760017 - 9760105
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaa-tttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||    
T  9760017 gagaaatgatatttgaacaaccattttttacaactttttgtgacaactttctctctcatactcacattatctttttactttctctctct 9760105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 41042253 - 41042341
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  41042253 agagaaatgatatttgaacaaccatttttaacaacttttgtgacaactttttctctcatactcacattatctttttactttctctctct 41042341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 9207589 - 9207677
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| || |||||||||||| ||||||||||||         |||||||||||||| ||||||||||||||||||    
T  9207589 agagaaatgatatttgaacaatcattttttacaacttttgtgacaactttctctctcatactcacattatttttttactttctctctct 9207677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 22888892 - 22888805
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||         ||||||||||||| |||||||||||| ||||||    
T  22888892 gagaaatgatatttgaacaaccatttttgacaatttttgtgacaactttctctctcatactcacattacctttttactttcactctct 22888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 43487377 - 43487424
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||    
T  43487377 aagagaaatgatatttgaacaaccattttttataatttttgtgacaac 43487424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 9194239 - 9194328
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||| ||||||||| || | ||| |||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||    
T  9194239 aagataaatgatatttggacaactattttttacaatttttgtgacatctttctctctcatactcacattatctttttactttctctctct 9194328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 6511250 - 6511334
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctct 238  Q
    ||||||||||||| |||| ||||||||||||||| ||| ||||||||         ||||||||||||||||||||| |||||||    
T  6511250 agagaaatgatatttgaacaaccattttttacaactttagtgacaactttctctctcatactcacattatctttttattttctct 6511334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 27490804 - 27490756
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||| |||| |||||||||| |||| ||||||||||||    
T  27490804 aaagagaaatgatatttgaacaaccatttttgacaacttttgtgacaac 27490756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 242
Target Start/End: Original strand, 9990747 - 9990778
Alignment:
Q  211 atactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||||||||||||||    
T  9990747 atactcacattatctttttactttctctctct 9990778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 34945160 - 34945074
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||| |||| || ||||||||| ||||||| |||||||         ||||||||||| |||||||||||||||||||||    
T  34945160 agaaatgatatttgaacaatcattttttataatttttatgacaactttctctctcatactcacatgatctttttactttctctctct 34945074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 42421978 - 42421884
Alignment:
Q  147 tttataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaa-cnnnnnnnncatactcacattatctttttactttctctct 240  Q
    |||| ||| ||||||||||||  ||| ||||||||||||||| |||||||||||          |||||||||||| ||||||||||||||||||    
T  42421978 tttacaaatgagaaatgatattcgaacaaccattttttacaacttttgtgacaattttgtcactcatactcacattttctttttactttctctct 42421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 14328437 - 14328470
Alignment:
Q  210 catactcacattatctttttactttctctctctg 243  Q
    |||||||||||||| |||||||||||||||||||    
T  14328437 catactcacattatatttttactttctctctctg 14328470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 17388669 - 17388590
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttacttt 234  Q
    ||||||||||||||| |||| || |||||||| ||| ||||||||||||         ||||||||||||||||||||||||    
T  17388669 aaagagaaatgatatttgaacaatcattttttgcaacttttgtgacaactttctct--atactcacattatctttttacttt 17388590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 240
Target Start/End: Original strand, 32477388 - 32477417
Alignment:
Q  211 atactcacattatctttttactttctctct 240  Q
    ||||||||||||||||||||||||||||||    
T  32477388 atactcacattatctttttactttctctct 32477417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 41195586 - 41195671
Alignment:
Q  158 gaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||| ||||||| ||||||| |||| |||||||||||          ||||||||||||| |||||||||||||||||||    
T  41195586 gaaatgatatttgaataatcatttttgacaacttttgtgacaattttctctctcatactcacattacctttttactttctctctct 41195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 7648389 - 7648437
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||| |||| | |||||| | |||||||||||||||||    
T  7648389 aaagagaaatgatatttgaacatccatttgtgacaatttttgtgacaac 7648437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 9647187 - 9647219
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||| ||||||||||||||||||||||||    
T  9647187 catactcatattatctttttactttctctctct 9647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 10472163 - 10472131
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  10472163 catactcacattatatttttactttctctctct 10472131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 19109163 - 19109123
Alignment:
Q  157 agaaatgatatatgaataaccattttttacaatttttgtga 197  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  19109163 agaaatgatatttgaacaactattttttacaatttttgtga 19109123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 22416268 - 22416300
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||| ||||||||||||||||||||||||||    
T  22416268 catacttacattatctttttactttctctctct 22416300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 29449267 - 29449299
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  29449267 catactcacattatatttttactttctctctct 29449299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 10692436 - 10692526
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||||         |||||||||||||||||||||||||||||||||    
T  10692436 aaagagaaatgatatttgaacaatcattttttataatttttgtgacaactttatctctcatactcacattatctttttactttctctctct 10692526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 27325758 - 27325845
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         ||||||||||| |||||||||||||||||||||    
T  27325758 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacatgatctttttactttctctctct 27325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 31249595 - 31249508
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||    
T  31249595 gagaaatgatatttgaacaaccattttttacaacttttgtgacaattttttctctcatactcacattatctttttactttctctctct 31249508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 36660527 - 36660434
Alignment:
Q  150 ataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||| ||||||||| |||| |||||||||||| ||||||||| |||||         |||||| ||||||||||||||||||||||||||    
T  36660527 ataaaagataaatgatatgtgaacaaccattttttataatttttgtaacaactttctctctcatacttacattatctttttactttctctctct 36660434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 37449498 - 37449409
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| | || ||||||||||||||| ||||||||||||         ||||||||||||||||||||||||||| |||||    
T  37449498 aagagaaatgatatttcaacaaccattttttacaacttttgtgacaactttttctctcatactcacattatctttttactttctgtctct 37449409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 12899001 - 12898913
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||| |||| ||||||||||||||||| || ||||||||||||         ||||||||||||||||||||||||| |||||||    
T  12899001 agagaaatcatatttgaataaccattttttataaattttgtgacaactttttctctcatactcacattatctttttactttatctctct 12898913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 22719440 - 22719527
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaa-cnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||          ||| |||||||||||||||||||||||||||||    
T  22719440 gagaaatgatatttgaacaaccattttttacaacttttgtgacaattttctctctcatgctcacattatctttttactttctctctct 22719527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 5277515 - 5277483
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||||||||||||||||||    
T  5277515 catactcacattatctttttactttctctctct 5277483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 36816688 - 36816600
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaa-cnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||  ||||||||| |||||||||| |||| ||||||||||| |        ||||||||||||||||||||||||| |||||||    
T  36816688 agagaaagaatatatgaacaaccatttttgacaacttttgtgacaatcttctctatcatactcacattatctttttactttttctctct 36816600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 45405527 - 45405619
Alignment:
Q  152 aaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||| | ||||||||||| | |||||||||||||||         |||| ||||||||| ||||||||||||||||||    
T  45405527 aaaagagaaatgatatatgtacaaccattttttaataatttttgtgacaactttttctttcatattcacattatatttttactttctctctct 45405619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 10902705 - 10902792
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| ||||||||||||||| | ||||||||| |||||         || ||||||||||| ||||||||||||||||||    
T  10902705 gagaaatgatatttgaataaccatttttgataatttttgtaacaactttctctctcacactcacattatgtttttactttctctctct 10902792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 43397781 - 43397864
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctct 238  Q
    |||||||||||| |||| ||||||||||||||| |||||| |||||         |||||||||||||| ||||||||||||||    
T  43397781 gagaaatgatatttgaacaaccattttttacaacttttgttacaactttctctctcatactcacattatttttttactttctct 43397864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 28772198 - 28772153
Alignment:
Q  153 aaagagaaatgatatatgaataaccatttttt-acaatttttgtga 197  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||    
T  28772198 aaagagaaatgatatttgaacaaccattttttgacaatttttgtga 28772153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 43715873 - 43715962
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| || | ||||||||| || || ||||||||||||         |||||||||||||| ||||||||||||||||||    
T  43715873 aagagaaatgatatttgtacaaccattttctaaaacttttgtgacaactttctctctcatactcacattatatttttactttctctctct 43715962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 5740801 - 5740769
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  5740801 catactcacattatgtttttactttctctctct 5740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 5772049 - 5771997
Alignment:
Q  150 ataaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||||||| |||| ||||||||||| |||| |||||| |||||    
T  5772049 ataaaagagaaatgatatttgaacaaccattttttgacaacttttgtaacaac 5771997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 25830261 - 25830229
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  25830261 catactcacattatatttttactttctctctct 25830229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 34810715 - 34810671
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtga 197  Q
    ||||||||||||||| |||| ||||||||||||||| | ||||||    
T  34810715 aaagagaaatgatatttgaacaaccattttttacaactcttgtga 34810671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 35067216 - 35067248
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  35067216 catactcacattatatttttactttctctctct 35067248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 41639815 - 41639783
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  41639815 catactcacattatatttttactttctctctct 41639783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 41955916 - 41955975
Alignment:
Q  142 cataatttataaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||| ||||||||||||||||| || ||||||||||||| |||| |||| |||||||    
T  41955916 cataattt-taaaagagaaatgatatttgtataaccattttttaacaacttttatgacaac 41955975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 2571632 - 2571721
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||        |||| |||||||||| ||||||||| |||||||    
T  2571632 aaagagaaatgatatttgaacaaccattttttacaacttttgtgacaacttctctctcatagtcacattatccttttactttttctctct 2571721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 33100806 - 33100895
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| ||||||||||||||| |||| |||||||         |||||||||||||||||||||||||||||||||    
T  33100806 aagagaaatgatatttgaacaaccattttttacaacttttttgacaactttctctctcatactcacattatctttttactttctctctct 33100895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 37685331 - 37685416
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctct 240  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||    
T  37685331 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctct 37685416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 37700187 - 37700102
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctct 240  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||    
T  37700187 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctct 37700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8350270 - 8350182
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctct 240  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||         ||||||||||| |||||||||||||||||||    
T  8350270 aaagagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacatgatctttttactttctctct 8350182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 35369698 - 35369787
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| || |||||||||||| ||||||||||||         |||||||||||| ||||||||||||||||||||    
T  35369698 aagagaaatgatatttgaacaatcattttttacaacttttgtgacaactttctatctcatactcacattgtctttttactttctctctct 35369787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 649768 - 649856
Alignment:
Q  156 gagaaatgatatatgaataaccatttttt-acaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 649856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 30735361 - 30735277
Alignment:
Q  159 aaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||| ||||||||||||||||||    
T  30735361 aaatgatatttgaacaaccattttttacaacttttgtgacaactttttctctcatactcacattatttttttactttctctctct 30735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 49065436 - 49065348
Alignment:
Q  155 agagaaatgatatatgaataaccatttttt-acaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||| ||||||| ||||| |||||||||||        |||||||||||||| ||||||||||||||||||    
T  49065436 agagaaatgatatttgaacaactattttttgacaatatttgtgacaacttttctttcatactcacattatgtttttactttctctctct 49065348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 23645411 - 23645498
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| || | ||||||||||||||| |||| |||||||         |||||||||||||||||||||||||||||||||    
T  23645411 gagaaatgatatttggacaaccattttttacaacttttttgacaactttatctctcatactcacattatctttttactttctctctct 23645498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 31088178 - 31088268
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||| |||| |||| |||||||||||| || |||||||| |||         |||||||||||||||||||||||||||||||||    
T  31088178 aaagagaaataatatttgaacaaccattttttataacttttgtgataactttttctctcatactcacattatctttttactttctctctct 31088268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 3159376 - 3159421
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||    
T  3159376 gagaaatgatatttgaacaaccattttttacaacttttgtgacaac 3159421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 12657220 - 12657305
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctct 238  Q
    |||||||||||||| |||| || |||||||||||||||||| || |||         |||||||||||||||||||||||||||||    
T  12657220 aagagaaatgatatttgaacaatcattttttacaatttttgagataactttctctctcatactcacattatctttttactttctct 12657305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 37619538 - 37619631
Alignment:
Q  150 ataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||| || | |||||||||| | || ||||||||||||         ||||||||||||||||||||| |||||||||||    
T  37619538 ataaaagagaaatgatatttggacaaccatttttgataacttttgtgacaactttctctctcatactcacattatctttttaatttctctctct 37619631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 9987947 - 9988039
Alignment:
Q  152 aaaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||| |||| ||||| ||||| |||| ||||||||||||         |||||||||||||| ||||||||||||||||||    
T  9987947 aaaagagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttctctttcatactcacattatatttttactttctctctct 9988039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 44519223 - 44519135
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||| |||||||||| |||| |||| |||||||          ||||| ||||||||||||||||||||||||||    
T  44519223 agagaaatgatatatgaacaaccatttttgacaacttttatgacaactttctctcttatacttacattatctttttactttctctctct 44519135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 3982104 - 3982057
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||||| |||| |||| |||||||||| ||||||||||||    
T  3982104 aagagaaatgatatttgaacaacctttttttacaacttttgtgacaac 3982057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 27465128 - 27465041
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| | || ||||||||||||||| ||||||||||||         ||||||||||| ||||||||||||| |||||||    
T  27465128 gagaaatgatatttaaacaaccattttttacaacttttgtgacaactttctctctcatactcacatgatctttttactttgtctctct 27465041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 37275104 - 37275017
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| |||||||||||| || |||||||| |||         ||||||||||||||||||||||||||| |||||    
T  37275104 gagaaatgatatttgaacaaccattttttataacttttgtgataactttctctttcatactcacattatctttttactttctttctct 37275017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 15083123 - 15083077
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaa 200  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||||    
T  15083123 aagagaaatgatatttgaacaaccatttttgacaacttttgtgacaa 15083077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 29359694 - 29359724
Alignment:
Q  210 catactcacattatctttttactttctctct 240  Q
    |||||||||||||||||||||||||||||||    
T  29359694 catactcacattatctttttactttctctct 29359724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 44914646 - 44914556
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||||| | || || |||||||||||||||| ||||||||         || |||||||||||||||||| |||||||||||    
T  44914646 aaagagaaatgatattttaacaaacattttttacaattttagtgacaactttctgcctcagactcacattatctttttattttctctctct 44914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 45333569 - 45333615
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||| |||| || |||||||||||| ||||||||||||    
T  45333569 agagaaatgatatttgaacaatcattttttacaacttttgtgacaac 45333615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 43775196 - 43775293
Alignment:
Q  146 atttataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||| ||| |||| |||||||| |||| |||||||||| | ||| |||||||||||         ||||||| |||||||||||||||||||||||||    
T  43775196 atttttaatagaggaatgatatttgaacaaccatttttgataatgtttgtgacaactttctttctcatactcgcattatctttttactttctctctct 43775293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 48983742 - 48983693
Alignment:
Q  153 aaagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    ||||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  48983742 aaagagaaatgatatttgaacaaccattttttgacaacttttgtgacaac 48983693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 740971 - 740939
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  740971 catactcacattatatttttactttctctctct 740939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 5771763 - 5771731
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||| |||||||||||||||||    
T  5771763 catactcacattatcattttactttctctctct 5771731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 11597692 - 11597724
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  11597692 catactcacattatgtttttactttctctctct 11597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 15470072 - 15470040
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||| |||||||||||    
T  15470072 catactcacattatctttttattttctctctct 15470040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 24806295 - 24806247
Alignment:
Q  154 aagagaaatgatatatgaataacca-ttttttacaatttttgtgacaac 201  Q
    |||||||||||||| |||||||||| ||||| |||| ||||||||||||    
T  24806295 aagagaaatgatatttgaataaccactttttgacaacttttgtgacaac 24806247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 36954713 - 36954745
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  36954713 catactcacattatgtttttactttctctctct 36954745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 48261195 - 48261227
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  48261195 catactcacattatgtttttactttctctctct 48261227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 48470694 - 48470726
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||||||||||||||||||    
T  48470694 catactcacattacctttttactttctctctct 48470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 49660235 - 49660267
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  49660235 catactcacattatttttttactttctctctct 49660267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 51718642 - 51718610
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||||||| ||||||||||    
T  51718642 catactcacattatctttttaccttctctctct 51718610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 19522071 - 19521987
Alignment:
Q  159 aaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  19522071 aaatgatatttgaacaaccattttttacaacttttgtgacaactttctctttcatactcacattatctttttactttctctctct 19521987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 22649732 - 22649648
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaa-cnnnnnnnncatactcacattatctttttactttctctc 239  Q
    |||||||||||| |||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  22649732 gagaaatgatatttgaacaaccattttttacaatttttgtgacaattttctctctcatactcacattatctttttactttctctc 22649648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 26791319 - 26791228
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||||||         ||| |||||||||||||||||||||||||||||    
T  26791319 aaaagagaaataatatttgaacaaccattttttacaacttttgtgacaactttctctctcatgctcacattatctttttactttctctctct 26791228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 28306203 - 28306116
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||         ||||||||||||||||| |||||||||||||||    
T  28306203 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttatctctcatactcacattatcttcttactttctctctct 28306116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 41321252 - 41321342
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||    
T  41321252 aaaagagaaatgatatatgaacaatca-tttttacaatttttgtgacaactttctttctcatactcacattatctttgtactttctctctct 41321342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 5721888 - 5721804
Alignment:
Q  156 gagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctc 239  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||         |||||| |||||||||||||||||||||||    
T  5721888 gagaaatgatatttgaacaactattttttacaatttttgtgacaactttatctctcatactgacattatctttttactttctctc 5721804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 33037519 - 33037607
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||||||         ||||||||||||||||||||||||| |||||||    
T  33037519 agagaaatgatatttgaacaaccattttttacaacttttatgacaactttctctctcatactcacattatctttttactttttctctct 33037607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 36738951 - 36739035
Alignment:
Q  159 aaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    ||||||||||||||  |||||||||||||| | ||||||||||         |||||||||||||||||||||||||||||||||    
T  36738951 aaatgatatatgaaccaccattttttacaactcttgtgacaactttctctctcatactcacattatctttttactttctctctct 36739035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 39807794 - 39807740
Alignment:
Q  147 tttataaaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||| ||| |||||||||||| |||| |||||||||||||||||||| |||||||    
T  39807794 tttaaaaatgagaaatgatatttgaacaaccattttttacaatttttatgacaac 39807740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 1274356 - 1274445
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| |||||||||| |||| ||||||||||||         ||||||||||||| |||||||||| ||||||||    
T  1274356 aagagaaatgatatttgaacaaccatttttgacaacttttgtgacaactttatctttcatactcacattacctttttacttcctctctct 1274445  T

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Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 18660757 - 18660846
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaa-cnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||||          ||||||||| |||||||||||||||||||||||    
T  18660757 aagagaaatgatatttgaacaaccatttttgacaacttttgtgacaattttctctctcatactcacgttatctttttactttctctctct 18660846  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 5168238 - 5168270
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||||||||||||||||||    
T  5168238 catactcacattatctttttactttctctctct 5168270  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 14051390 - 14051342
Alignment:
Q  153 aaagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||||    
T  14051390 aaagagaaatgatatttgaaaaatcattttttataatttttgtgacaac 14051342  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 1080025 - 1079978
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaac 201  Q
    |||||||||||||| |||| ||  ||||||||||||||||||||||||    
T  1080025 aagagaaatgatatttgaacaattattttttacaatttttgtgacaac 1079978  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 6758866 - 6758816
Alignment:
Q  152 aaaagagaaatgatatatgaataaccatttt-ttacaatttttgtgacaac 201  Q
    ||||||||||||||||||| | ||||||||| | |||||||||||||||||    
T  6758866 aaaagagaaatgatatatgtacaaccattttctaacaatttttgtgacaac 6758816  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 7076641 - 7076595
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaa 200  Q
    |||||||||||||| |||| || ||||||||| ||||||||||||||    
T  7076641 aagagaaatgatatttgaacaatcattttttataatttttgtgacaa 7076595  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 4434472 - 4434520
Alignment:
Q  146 atttataaaagagaaatgatatatgaataaccatttttt-acaattttt 193  Q
    |||||||||||||||||||||| || | ||||||||||| |||||||||    
T  4434472 atttataaaagagaaatgatatttgtacaaccattttttgacaattttt 4434520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 7287205 - 7287173
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  7287205 catactcacattatatttttactttctctctct 7287173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 13089855 - 13089807
Alignment:
Q  154 aagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  13089855 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaac 13089807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 14923079 - 14923115
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaa 188  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14923079 aaaagagaaatgatatttgaacaaccattttttacaa 14923115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 22098311 - 22098343
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  22098311 catactcacattatatttttactttctctctct 22098343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 33958275 - 33958243
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  33958275 catactcacattatatttttactttctctctct 33958243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 35650003 - 35649971
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| ||||||||||||||||||    
T  35650003 catactcacattatgtttttactttctctctct 35649971  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 35519 - 35608
Alignment:
Q  152 aaaagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnncatactcacattatctttttactttctctctct 242  Q
    |||| ||||||||||| |||| ||||||||||||||| |||||||| |||        |||||||| ||||||||||||||||||||||||    
T  35519 aaaaaagaaatgatatttgaacaaccattttttacaacttttgtgataac-tctctctcatactcatattatctttttactttctctctct 35608  T

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Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 49293 - 49382
Alignment:
Q  154 aagagaaatgatatatgaataaccattttttacaatttttgtgacaacnnnnnnnn-catactcacattatctttttactttctctctct 242  Q
    |||||||||||||| |||| |||||||||||| || |||| |||||||         |||||||||||||||||||||||||||| ||||    
T  49293 aagagaaatgatatttgaacaaccattttttataacttttatgacaactttctctctcatactcacattatctttttactttctcactct 49382  T

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Target: scaffold0056 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 76691 - 76603
Alignment:
Q  155 agagaaatgatatatgaataaccattttttacaatttttgtgacaac-nnnnnnnncatactcacattatctttttactttctctctct 242  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||||         ||||| ||||||||||||| |||||||||||||    
T  76691 agagaaatgatatttgaacaactattttttataatttttgtgacaactttctctctcatacccacattatcttttcactttctctctct 76603  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 10979 - 10947
Alignment:
Q  210 catactcacattatctttttactttctctctct 242  Q
    |||||||||||||||||||||||||||||||||    
T  10979 catactcacattatctttttactttctctctct 10947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 101979 - 101931
Alignment:
Q  154 aagagaaatgatatatgaataaccatttttt-acaatttttgtgacaac 201  Q
    |||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  101979 aagagaaatgatatctgaacaaccattttttgacaacttttgtgacaac 101931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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