View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0953_low_34 (Length: 421)

Name: NF0953_low_34
Description: NF0953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0953_low_34
NF0953_low_34
[»] chr7 (45 HSPs)
chr7 (203-414)||(9625111-9625320)
chr7 (102-203)||(9623260-9623361)
chr7 (106-202)||(6719067-6719164)
chr7 (114-202)||(9125023-9125112)
chr7 (114-202)||(2465797-2465886)
chr7 (118-202)||(2941750-2941835)
chr7 (114-202)||(13125129-13125218)
chr7 (114-202)||(42515608-42515697)
chr7 (114-202)||(2193320-2193409)
chr7 (114-202)||(2465988-2466077)
chr7 (114-202)||(28495918-28496007)
chr7 (114-202)||(34405584-34405673)
chr7 (114-202)||(36422316-36422405)
chr7 (115-202)||(42515157-42515245)
chr7 (114-202)||(2189208-2189297)
chr7 (114-198)||(11517386-11517471)
chr7 (115-203)||(35474113-35474202)
chr7 (114-202)||(46425805-46425894)
chr7 (114-203)||(18833350-18833440)
chr7 (114-202)||(2611645-2611734)
chr7 (115-210)||(26421290-26421386)
chr7 (116-202)||(6747591-6747678)
chr7 (137-202)||(28495601-28495667)
chr7 (114-202)||(679881-679969)
chr7 (115-203)||(25182426-25182515)
chr7 (140-202)||(13122498-13122561)
chr7 (115-202)||(31406577-31406665)
chr7 (118-203)||(26421752-26421838)
chr7 (106-203)||(29357448-29357546)
chr7 (114-199)||(35527117-35527203)
chr7 (146-202)||(7646471-7646528)
chr7 (106-185)||(31743834-31743914)
chr7 (116-202)||(5406581-5406668)
chr7 (116-202)||(16192385-16192472)
chr7 (122-203)||(7461343-7461424)
chr7 (114-203)||(22529227-22529317)
chr7 (163-202)||(43776283-43776322)
chr7 (149-202)||(7646514-7646568)
chr7 (114-164)||(29039052-29039102)
chr7 (114-203)||(36015403-36015493)
chr7 (115-160)||(43233478-43233523)
chr7 (115-197)||(20966116-20966199)
chr7 (114-199)||(11372515-11372601)
chr7 (116-203)||(33316794-33316877)
chr7 (114-150)||(26957603-26957639)
[»] chr4 (55 HSPs)
chr4 (203-414)||(13611926-13612135)
chr4 (102-203)||(13613884-13613985)
chr4 (114-202)||(12691986-12692075)
chr4 (115-203)||(49998701-49998790)
chr4 (115-202)||(44471312-44471400)
chr4 (106-203)||(21220317-21220415)
chr4 (114-203)||(50398979-50399069)
chr4 (114-202)||(50398525-50398614)
chr4 (114-202)||(35871692-35871780)
chr4 (116-202)||(50814812-50814899)
chr4 (115-195)||(4127431-4127512)
chr4 (114-202)||(24628964-24629053)
chr4 (107-202)||(24629420-24629516)
chr4 (114-202)||(44470862-44470950)
chr4 (114-198)||(7678613-7678698)
chr4 (114-202)||(23942776-23942865)
chr4 (114-202)||(51331268-51331357)
chr4 (115-202)||(1645736-1645824)
chr4 (114-202)||(27026567-27026655)
chr4 (117-198)||(4185782-4185864)
chr4 (114-202)||(4127876-4127965)
chr4 (114-202)||(23350270-23350359)
chr4 (106-198)||(53996106-53996199)
chr4 (115-202)||(1464212-1464300)
chr4 (115-198)||(27029342-27029426)
chr4 (115-203)||(29628654-29628742)
chr4 (128-202)||(15306078-15306153)
chr4 (113-202)||(14571708-14571798)
chr4 (114-192)||(14572148-14572226)
chr4 (115-202)||(23943229-23943317)
chr4 (117-199)||(23091501-23091584)
chr4 (118-202)||(21067350-21067435)
chr4 (115-202)||(3169271-3169359)
chr4 (114-207)||(17628575-17628669)
chr4 (114-198)||(9423849-9423934)
chr4 (114-202)||(31817839-31817928)
chr4 (116-197)||(52048659-52048740)
chr4 (119-202)||(33764929-33765013)
chr4 (116-202)||(27578444-27578531)
chr4 (114-203)||(14351859-14351949)
chr4 (115-164)||(8467826-8467875)
chr4 (114-202)||(20306151-20306237)
chr4 (115-164)||(41869983-41870032)
chr4 (123-198)||(17029403-17029479)
chr4 (115-202)||(21067799-21067884)
chr4 (117-188)||(24271552-24271623)
chr4 (116-164)||(23976245-23976293)
chr4 (116-203)||(31817384-31817472)
chr4 (117-203)||(42838690-42838780)
chr4 (113-153)||(53391950-53391990)
chr4 (107-197)||(4186224-4186315)
chr4 (114-164)||(43928989-43929039)
chr4 (165-202)||(11828472-11828509)
chr4 (113-197)||(34554492-34554577)
chr4 (115-202)||(27578896-27578984)
[»] chr5 (39 HSPs)
chr5 (102-203)||(3886593-3886695)
chr5 (114-202)||(2193880-2193969)
chr5 (114-202)||(2474023-2474112)
chr5 (114-202)||(8642027-8642116)
chr5 (114-202)||(17445448-17445537)
chr5 (106-202)||(34371668-34371765)
chr5 (106-202)||(34372124-34372221)
chr5 (115-202)||(2474470-2474558)
chr5 (115-202)||(42788639-42788727)
chr5 (114-199)||(189132-189218)
chr5 (114-207)||(22556600-22556694)
chr5 (114-202)||(34867854-34867943)
chr5 (114-207)||(22557033-22557127)
chr5 (114-202)||(1821970-1822059)
chr5 (114-202)||(10927396-10927485)
chr5 (114-198)||(21886143-21886228)
chr5 (114-198)||(20039472-20039556)
chr5 (115-202)||(39147004-39147092)
chr5 (114-202)||(10926939-10927028)
chr5 (114-202)||(27646828-27646917)
chr5 (115-202)||(3887050-3887138)
chr5 (114-199)||(18304495-18304581)
chr5 (115-202)||(8391315-8391402)
chr5 (137-203)||(29680099-29680166)
chr5 (115-200)||(4673466-4673552)
chr5 (113-202)||(15513005-15513094)
chr5 (114-198)||(20858538-20858623)
chr5 (114-202)||(30684549-30684638)
chr5 (114-202)||(30719798-30719887)
chr5 (140-202)||(11757274-11757337)
chr5 (116-190)||(18750201-18750276)
chr5 (116-196)||(4657992-4658073)
chr5 (114-202)||(24182239-24182327)
chr5 (106-164)||(42429201-42429259)
chr5 (115-156)||(2058696-2058737)
chr5 (115-164)||(5066923-5066972)
chr5 (115-164)||(16370740-16370789)
chr5 (114-202)||(32574651-32574740)
chr5 (115-164)||(43356652-43356701)
[»] scaffold0499 (1 HSPs)
scaffold0499 (114-202)||(2044-2133)
[»] scaffold0020 (1 HSPs)
scaffold0020 (114-202)||(107456-107545)
[»] chr8 (40 HSPs)
chr8 (114-202)||(10844947-10845036)
chr8 (114-202)||(22026443-22026532)
chr8 (114-202)||(12827247-12827336)
chr8 (114-202)||(25144836-25144925)
chr8 (115-202)||(22548988-22549076)
chr8 (116-202)||(22548542-22548629)
chr8 (116-202)||(27925965-27926052)
chr8 (114-202)||(10844608-10844697)
chr8 (115-203)||(41659097-41659186)
chr8 (114-202)||(2044122-2044211)
chr8 (114-202)||(6464903-6464992)
chr8 (114-202)||(25147600-25147689)
chr8 (114-202)||(25148031-25148120)
chr8 (114-202)||(27022331-27022420)
chr8 (115-202)||(17103146-17103234)
chr8 (114-202)||(12100755-12100844)
chr8 (106-202)||(32292453-32292550)
chr8 (114-202)||(34308472-34308561)
chr8 (115-202)||(28453403-28453491)
chr8 (118-202)||(8080335-8080420)
chr8 (114-198)||(21316106-21316191)
chr8 (114-202)||(41913034-41913123)
chr8 (115-194)||(22840530-22840610)
chr8 (118-203)||(27819238-27819324)
chr8 (114-211)||(28375038-28375136)
chr8 (115-202)||(33852251-33852339)
chr8 (114-202)||(34308928-34309021)
chr8 (128-198)||(31283648-31283719)
chr8 (106-197)||(15819014-15819105)
chr8 (115-198)||(30527479-30527563)
chr8 (114-203)||(15567548-15567638)
chr8 (114-164)||(27021911-27021961)
chr8 (115-203)||(1297072-1297161)
chr8 (115-202)||(3745166-3745254)
chr8 (116-160)||(22705238-22705282)
chr8 (139-199)||(25307855-25307914)
chr8 (115-199)||(3744703-3744788)
chr8 (115-164)||(30334940-30334989)
chr8 (115-160)||(6466775-6466820)
chr8 (115-160)||(15568041-15568086)
[»] chr3 (40 HSPs)
chr3 (114-202)||(28561810-28561899)
chr3 (114-202)||(31284269-31284358)
chr3 (114-202)||(13150547-13150636)
chr3 (114-202)||(11180027-11180116)
chr3 (114-198)||(39653228-39653313)
chr3 (114-202)||(50347810-50347899)
chr3 (114-203)||(25239069-25239159)
chr3 (114-202)||(8067344-8067433)
chr3 (114-202)||(13150092-13150181)
chr3 (114-202)||(14814013-14814102)
chr3 (114-202)||(14820218-14820307)
chr3 (114-202)||(16811445-16811534)
chr3 (114-202)||(27187323-27187412)
chr3 (114-202)||(32227564-32227653)
chr3 (114-202)||(32386727-32386816)
chr3 (115-203)||(39641002-39641091)
chr3 (115-202)||(4067353-4067441)
chr3 (115-202)||(20885110-20885198)
chr3 (116-202)||(2911161-2911248)
chr3 (114-202)||(32227214-32227303)
chr3 (114-202)||(41472364-41472453)
chr3 (115-202)||(25238677-25238765)
chr3 (118-203)||(25802540-25802626)
chr3 (114-202)||(25230241-25230330)
chr3 (114-202)||(25237828-25237917)
chr3 (114-202)||(30529751-30529840)
chr3 (106-202)||(37045091-37045188)
chr3 (107-202)||(25248168-25248264)
chr3 (115-194)||(32796936-32797016)
chr3 (116-202)||(25230698-25230785)
chr3 (116-202)||(25238285-25238372)
chr3 (114-199)||(7493945-7494031)
chr3 (114-198)||(16810989-16811074)
chr3 (115-202)||(29224389-29224477)
chr3 (115-202)||(41474062-41474150)
chr3 (114-199)||(7477255-7477341)
chr3 (116-197)||(26309987-26310069)
chr3 (119-202)||(25802997-25803081)
chr3 (115-198)||(31103955-31104041)
chr3 (118-160)||(3890046-3890088)
[»] chr1 (39 HSPs)
chr1 (114-202)||(20054073-20054162)
chr1 (114-202)||(20054529-20054618)
chr1 (114-202)||(20054985-20055074)
chr1 (114-202)||(20055441-20055530)
chr1 (114-202)||(20055897-20055986)
chr1 (114-202)||(20056353-20056442)
chr1 (114-202)||(20057256-20057345)
chr1 (114-202)||(20057712-20057801)
chr1 (114-202)||(20845654-20845743)
chr1 (114-203)||(20056808-20056898)
chr1 (114-203)||(50002699-50002789)
chr1 (114-198)||(20060337-20060422)
chr1 (114-198)||(20061188-20061273)
chr1 (114-202)||(38340970-38341059)
chr1 (114-202)||(43057058-43057147)
chr1 (114-202)||(52250270-52250359)
chr1 (118-203)||(2634992-2635078)
chr1 (114-202)||(16451926-16452015)
chr1 (114-202)||(16461079-16461168)
chr1 (114-202)||(43057516-43057605)
chr1 (114-195)||(50002285-50002367)
chr1 (114-202)||(35759601-35759690)
chr1 (114-202)||(51372867-51372956)
chr1 (106-203)||(12883580-12883678)
chr1 (119-199)||(30872946-30873027)
chr1 (114-202)||(35760907-35760996)
chr1 (114-202)||(46693728-46693817)
chr1 (114-197)||(2328379-2328463)
chr1 (115-199)||(12728056-12728142)
chr1 (115-202)||(50003068-50003156)
chr1 (114-203)||(16907298-16907388)
chr1 (116-201)||(31822657-31822743)
chr1 (106-202)||(23180786-23180883)
chr1 (148-202)||(52250641-52250696)
chr1 (148-202)||(52250978-52251033)
chr1 (115-198)||(16440576-16440660)
chr1 (115-201)||(7548156-7548243)
chr1 (116-160)||(10820658-10820702)
chr1 (119-182)||(31823097-31823161)
[»] scaffold0047 (2 HSPs)
scaffold0047 (115-202)||(18128-18215)
scaffold0047 (114-202)||(17591-17680)
[»] chr2 (34 HSPs)
chr2 (116-202)||(30966756-30966843)
chr2 (116-202)||(1912591-1912677)
chr2 (114-202)||(8256590-8256679)
chr2 (114-202)||(29804746-29804835)
chr2 (114-202)||(41754353-41754442)
chr2 (114-203)||(33175022-33175112)
chr2 (114-199)||(33771065-33771151)
chr2 (114-202)||(5399810-5399899)
chr2 (106-202)||(11388244-11388340)
chr2 (114-202)||(24818390-24818479)
chr2 (114-202)||(25434049-25434138)
chr2 (114-202)||(30966298-30966387)
chr2 (114-202)||(33174567-33174656)
chr2 (115-202)||(16379002-16379090)
chr2 (113-199)||(18098874-18098961)
chr2 (115-203)||(16379458-16379547)
chr2 (114-202)||(25337990-25338079)
chr2 (106-202)||(38898905-38899002)
chr2 (115-203)||(1707106-1707195)
chr2 (106-202)||(11394591-11394686)
chr2 (113-203)||(83080-83171)
chr2 (114-202)||(29259613-29259702)
chr2 (115-202)||(30963713-30963801)
chr2 (115-199)||(8073957-8074042)
chr2 (114-202)||(15619962-15620051)
chr2 (115-196)||(13191039-13191121)
chr2 (106-203)||(27882918-27883016)
chr2 (114-202)||(20502087-20502175)
chr2 (117-164)||(1953222-1953269)
chr2 (114-160)||(30963299-30963345)
chr2 (115-202)||(30961876-30961964)
chr2 (114-164)||(15639798-15639848)
chr2 (115-160)||(18447954-18447999)
chr2 (162-199)||(32377712-32377749)
[»] scaffold0243 (1 HSPs)
scaffold0243 (114-202)||(1284-1373)
[»] scaffold0024 (1 HSPs)
scaffold0024 (114-202)||(105784-105873)
[»] chr6 (40 HSPs)
chr6 (114-202)||(13492396-13492485)
chr6 (114-202)||(13492853-13492942)
chr6 (115-196)||(7911943-7912025)
chr6 (114-203)||(15929646-15929736)
chr6 (114-202)||(13191506-13191595)
chr6 (114-202)||(16520032-16520121)
chr6 (114-202)||(17027524-17027613)
chr6 (114-202)||(20850385-20850474)
chr6 (114-202)||(20896681-20896770)
chr6 (115-202)||(2681209-2681297)
chr6 (115-202)||(6330905-6330993)
chr6 (114-197)||(3652550-3652634)
chr6 (115-202)||(9352127-9352215)
chr6 (113-202)||(17850981-17851071)
chr6 (114-202)||(11062349-11062438)
chr6 (114-202)||(20126175-20126264)
chr6 (114-198)||(20735759-20735844)
chr6 (115-202)||(7912375-7912463)
chr6 (114-189)||(27334225-27334301)
chr6 (114-189)||(27394965-27395041)
chr6 (115-202)||(17731102-17731194)
chr6 (114-202)||(17851438-17851527)
chr6 (114-198)||(23986314-23986399)
chr6 (114-198)||(9440306-9440391)
chr6 (114-198)||(28583027-28583112)
chr6 (116-202)||(2890832-2890919)
chr6 (115-201)||(23776506-23776592)
chr6 (115-198)||(2720560-2720645)
chr6 (114-202)||(21312035-21312124)
chr6 (115-202)||(21311580-21311668)
chr6 (114-188)||(15929263-15929338)
chr6 (116-190)||(17205405-17205479)
chr6 (149-202)||(28780209-28780263)
chr6 (106-183)||(31821704-31821782)
chr6 (114-197)||(1991617-1991701)
chr6 (115-198)||(14771716-14771800)
chr6 (114-199)||(28065831-28065920)
chr6 (106-203)||(9440849-9440947)
chr6 (116-203)||(33774994-33775084)
chr6 (114-198)||(20732642-20732727)
[»] scaffold0322 (1 HSPs)
scaffold0322 (114-202)||(19030-19119)
[»] scaffold0168 (1 HSPs)
scaffold0168 (114-202)||(2806-2895)
[»] scaffold0018 (1 HSPs)
scaffold0018 (114-202)||(10364-10453)
[»] scaffold0022 (4 HSPs)
scaffold0022 (115-202)||(162671-162759)
scaffold0022 (106-196)||(69814-69905)
scaffold0022 (146-202)||(163167-163224)
scaffold0022 (149-202)||(163127-163181)
[»] scaffold0333 (2 HSPs)
scaffold0333 (120-198)||(4631-4710)
scaffold0333 (120-202)||(5091-5174)
[»] scaffold0040 (1 HSPs)
scaffold0040 (114-202)||(2203-2292)
[»] scaffold0002 (1 HSPs)
scaffold0002 (114-202)||(154821-154910)
[»] scaffold0389 (1 HSPs)
scaffold0389 (137-202)||(13526-13592)
[»] scaffold0005 (2 HSPs)
scaffold0005 (114-192)||(245150-245228)
scaffold0005 (113-202)||(245578-245668)
[»] scaffold0557 (1 HSPs)
scaffold0557 (114-199)||(2169-2255)
[»] scaffold0664 (1 HSPs)
scaffold0664 (106-184)||(3993-4072)
[»] scaffold0391 (1 HSPs)
scaffold0391 (106-199)||(14797-14891)
[»] scaffold0007 (1 HSPs)
scaffold0007 (106-164)||(142306-142364)
[»] scaffold0088 (1 HSPs)
scaffold0088 (114-162)||(23737-23785)
[»] scaffold0277 (1 HSPs)
scaffold0277 (149-202)||(14695-14749)
[»] scaffold0036 (1 HSPs)
scaffold0036 (114-190)||(26134-26211)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 203 - 414
Target Start/End: Original strand, 9625111 - 9625320
Alignment:
Q  203 tctgaattctactgtgatttcttcttgaccaaagtataatatgaaacattgatttctatgcatcttttacgagaaaaagttggttataatgagaaaaagt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9625111 tctgaattctactgtgatttcttcttgaccaaagtataatatgaaacattgatttctatgcatcttttacgagaaaaagttggttataatgagaaaaact 9625210  T
Q  303 tcagctagagaaccgacatagaacgcaacgccaattgaattcagagagataagagaacaaatactctgccaagcccttttgggatcctgttagagtgagt 402  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||    
T  9625211 tcagctagagaaccgacatacaacgcaacgccaattgaattcagagagataagagaacaaatactctgccaagccctttttggatcctgtt--agtgagt 9625308  T
Q  403 gtttctgtgctc 414  Q
    ||||||||||||    
T  9625309 gtttctgtgctc 9625320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 9623260 - 9623361
Alignment:
Q  102 ggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9623260 ggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagttcattctataagaactccacagttaagcgt 9623359  T
Q  202 gt 203  Q
    ||    
T  9623360 gt 9623361  T

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Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 6719164 - 6719067
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  6719164 gaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccagagttaagcgtg 6719067  T

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Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 9125023 - 9125112
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9125023 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 9125112  T

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Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2465797 - 2465886
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2465797 gcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2465886  T

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Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 2941835 - 2941750
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2941835 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2941750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 13125218 - 13125129
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  13125218 gcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13125129  T

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Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 42515608 - 42515697
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42515608 gcttataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 42515697  T

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Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2193320 - 2193409
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttct-ttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  2193320 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaagcgtg 2193409  T

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Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2465988 - 2466077
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||| ||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2465988 gcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2466077  T

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Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 28495918 - 28496007
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  28495918 gcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 28496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 34405673 - 34405584
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  34405673 gcttataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 34405584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 36422316 - 36422405
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  36422316 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 36422405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 42515157 - 42515245
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  42515157 cttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactccacagttaagcgtg 42515245  T

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Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2189208 - 2189297
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||    
T  2189208 gcttataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtg 2189297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 11517471 - 11517386
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||||||    
T  11517471 gcttataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataagaactccgcagttaag 11517386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 35474202 - 35474113
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||  ||| || |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  35474202 cttataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgt 35474113  T

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Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 46425805 - 46425894
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||||||    
T  46425805 gcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacagttaagcgtg 46425894  T

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Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 18833350 - 18833440
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||    
T  18833350 gcttatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataagaactccacagttaagcgtgt 18833440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 2611734 - 2611645
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||    
T  2611734 gcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaactccatagttaagcgtg 2611645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 26421386 - 26421290
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcat-cttctttcggtagctcattctataagaactccacagttaagcgtgtctgaatt 210  Q
    ||||||||||||| ||||||| |||||||||||||||||||||  || |||||||||  ||||| ||||||||||||||||||| ||||| ||||||    
T  26421386 cttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaaacgtgtttgaatt 26421290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 6747678 - 6747591
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||  |||| |||| |||||||||||||||||||    
T  6747678 ttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcctattccataaaaactccacagttaagcgtg 6747591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 28495667 - 28495601
Alignment:
Q  137 acctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  28495667 acctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacagttaagcgtg 28495601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 679881 - 679969
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||| ||||||  |||||| ||||| ||||||||||||||||||||||||    
T  679881 gcttataagaattgttgg-tactacctatatcaacaagatgcatattctttttggtagcccattccataagaactccacagttaagcgtg 679969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 25182426 - 25182515
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||  |||||||| ||||||| ||||||||| |||||||||| ||||    
T  25182426 cttataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaagtgtgt 25182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 13122561 - 13122498
Alignment:
Q  140 tatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13122561 tatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 31406665 - 31406577
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||| ||||||||||| |   ||||||||||||||||||||||||| |||||||||| | ||  ||||||||||||||||||||||||    
T  31406665 cttattagaattgtttggtgttacctatatcaacaagatgcatcttcttttcggtagcccgtttcataagaactccacagttaagcgtg 31406577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 26421838 - 26421752
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||| | |||  |||||| |||||||||| ||||||||| ||||||| ||||| ||||||||| |||||||||||||||    
T  26421838 ataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaactacacagttaagcgtgt 26421752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 29357546 - 29357448
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| || |||||||||||||||| ||| | ||||||||||||||||||||||| ||||| |||| | ||  ||||||||| ||||||||| |||||    
T  29357546 gaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaaccgtgt 29357448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 35527203 - 35527117
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| | | ||||||||||||||||||||| ||| |||| ||||  ||||| ||| |||||||||||||||||    
T  35527203 gcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagc 35527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 7646528 - 7646471
Alignment:
Q  146 aacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  7646528 aacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtg 7646471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 31743914 - 31743834
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaa 185  Q
    |||||| ||||||||||||| ||||| | | | ||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  31743914 gaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttcttttcggtagcccattccataagaa 31743834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 5406668 - 5406581
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||  ||| ||| || ||  | ||||||||||||||||||||||||    
T  5406668 ttataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaagcgtg 5406581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 16192385 - 16192472
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||  ||||| ||||||||||||||||||| ||| |||||| ||||| |||||||||  ||||| |||||||    
T  16192385 ttataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaactatacagtgaagcgtg 16192472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 7461424 - 7461343
Alignment:
Q  122 gaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||| | |||||| |||||||| ||||||| ||| ||||| |||||| |||||||||| ||||||||||||||    
T  7461424 gaattgtttgatactaactatataaacaagatacatcttctttttggtagttcattc-ataagaactctacagttaagcgtgt 7461343  T

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Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 22529317 - 22529227
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||| |||||| ||| | |||||| |||||||||||||||| |||| ||| ||||||  | ||||||| |||||||||||||||    
T  22529317 gcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagttaagcgtgt 22529227  T

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Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 43776322 - 43776283
Alignment:
Q  163 ttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43776322 ttcggtagctcattccataagaactccacagttaagcgtg 43776283  T

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Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 7646514 - 7646568
Alignment:
Q  149 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  7646514 aagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtg 7646568  T

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Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 29039102 - 29039052
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||| |||||||||||| ||| |||||||||||||| |||||||||||||    
T  29039102 gcttacaagaattgtttggtactacctatatcaacaacatgcatcttcttt 29039052  T

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Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 36015493 - 36015403
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||| |||||||||||| ||| || |||||||||||||||| ||||| |||   |||| ||||| ||||||||| ||||||||| |||||    
T  36015493 gcttaaaagaattgtttggtactacatatatcaacaagatgcctcttcttttaaatagcccattccataagaacttcacagttaaacgtgt 36015403  T

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Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 43233478 - 43233523
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||    
T  43233478 cttataagaattgtttggtactatctatatcaacaagatgcatctt 43233523  T

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Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 20966116 - 20966199
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaa 197  Q
    |||||||||||| |||  ||  ||||||| |||||||||| || || ||| ||||||||||||| ||||||||| |||||||||    
T  20966116 cttataagaattattttgtaatacctataccaacaagatgtatattattttcggtagctcattccataagaacttcacagttaa 20966199  T

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Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 11372515 - 11372601
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| ||| |||| || ||||| ||||||| ||  ||| |||||||||  | |||||||||||| ||||||||    
T  11372515 gcttataagaattgtttggtactacctgtaccaacatgatgcatgttatttttggtagctcaaaccataagaactccaaagttaagc 11372601  T

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Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 33316794 - 33316877
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| |  || |||||||||||||||  |||  |||||||||| ||  |||||||||||||||| |||| |||||    
T  33316794 ttataagaattgtttgacaatacttatatcaacaagatg--tct--tttcggtagcccaaactataagaactccacaattaaacgtgt 33316877  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 26957639 - 26957603
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaa 150  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  26957639 gcttataagaattgtttggtactacctatatcaacaa 26957603  T

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Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 203 - 414
Target Start/End: Complemental strand, 13612135 - 13611926
Alignment:
Q  203 tctgaattctactgtgatttcttcttgaccaaagtataatatgaaacattgatttctatgcatcttttacgagaaaaagttggttataatgagaaaaagt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13612135 tctgaattctactgtgatttcttcttgaccaaagtataatatgaaacattgatttctatgcatcttttacgagaaaaagttggttataatgagaaaaact 13612036  T
Q  303 tcagctagagaaccgacatagaacgcaacgccaattgaattcagagagataagagaacaaatactctgccaagcccttttgggatcctgttagagtgagt 402  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||    
T  13612035 tcagctagagaaccgacatacaacgcaacgccaattgaattcagagagataagagaacaaatactctgccaagccctttttggatcctgtt--agtgagt 13611938  T
Q  403 gtttctgtgctc 414  Q
    ||||||||||||    
T  13611937 gtttctgtgctc 13611926  T

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Target: chr4; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 13613985 - 13613884
Alignment:
Q  102 ggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13613985 ggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagttcattctataagaactccacagttaagcgt 13613886  T
Q  202 gt 203  Q
    ||    
T  13613885 gt 13613884  T

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Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 12692075 - 12691986
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12692075 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 12691986  T

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Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 49998701 - 49998790
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  49998701 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 49998790  T

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Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 44471400 - 44471312
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  44471400 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 44471312  T

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Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 21220415 - 21220317
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||    
T  21220415 gaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacacagttaagcgtgt 21220317  T

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Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 50399069 - 50398979
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  50399069 gcttataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 50398979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 50398614 - 50398525
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  50398614 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaagcgtg 50398525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 35871692 - 35871780
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||    
T  35871692 gcttatatgaattgtttggtaccacctatatcaacaagatgcatttcttttcggtagctcattccataagaactccacagttaagcgtg 35871780  T

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Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 50814899 - 50814812
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 50814812  T

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Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 4127512 - 4127431
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtt 195  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  4127512 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtt 4127431  T

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Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 24629053 - 24628964
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  24629053 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtg 24628964  T

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Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 24629516 - 24629420
Alignment:
Q  107 aaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||||||    
T  24629516 aaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtg 24629420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 44470950 - 44470862
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| |  ||| ||||||| ||||||||||||||||||||||||    
T  44470950 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctgttcgtaactcattccataagaactccacagttaagcgtg 44470862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 7678698 - 7678613
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  7678698 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacagttaag 7678613  T

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Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 23942865 - 23942776
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||| ||||| ||||||||||||||||||||||||    
T  23942865 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagttaagcgtg 23942776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 51331357 - 51331268
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| | ||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  51331357 gcttataagaattgtttggtactatctatatcaacaagatacatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 51331268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 1645824 - 1645736
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  1645824 cttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 1645736  T

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Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 27026567 - 27026655
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||| ||||||||| |  |||||||||||    
T  27026567 gcttataagaattgtttgatactacctatatcaacaagatgcatctttttttggtagcccattccataagaactacgtagttaagcgtg 27026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 4185782 - 4185864
Alignment:
Q  117 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||    
T  4185782 tataagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaagaactctacagttaag 4185864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 4127965 - 4127876
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||  |||| ||||||||| || |||||||||||    
T  4127965 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagagttaagcgtg 4127876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 23350359 - 23350270
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||| ||| ||||||||| || |||||||||||    
T  23350359 gcttataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcatagttaagcgtg 23350270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 53996199 - 53996106
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||    
T  53996199 gaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaactccacagttaag 53996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 1464212 - 1464300
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||| || ||||||    
T  1464212 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtg 1464300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 27029342 - 27029426
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||| |||| ||| || |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  27029342 cttataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaag 27029426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 29628742 - 29628654
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| ||| ||||||||||||||||||  ||||  || |||||| ||||| |||||||||||||||||||||||||    
T  29628742 cttataagaattgtttggtactacctatatcaacaagatgtgtctttgtttggtagcccattccataagaactccacagttaagcgtgt 29628654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 15306153 - 15306078
Alignment:
Q  128 tttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  15306153 tttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 15306078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 14571798 - 14571708
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||||  |  | ||||||||||||||||||||||||    
T  14571798 tgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtg 14571708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 14572226 - 14572148
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccaca 192  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |  | ||||||||||||||    
T  14572226 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttcggtagcctaaaccataagaactccaca 14572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 23943317 - 23943229
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| || | |||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  23943317 cttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtg 23943229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 23091584 - 23091501
Alignment:
Q  117 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagc 199  Q
    ||||| ||||||||| ||| || ||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  23091584 tataaaaattgtttggtactacatatattaacaagatgcatcttctttctggtagcttattctataaaaactccacagttaagc 23091501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 21067350 - 21067435
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||| |||| |||| ||| || ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||||    
T  21067350 ataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtactccacaattaagcgtg 21067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 3169271 - 3169359
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||| ||| |||| | || || |||||||||||||| |||||||||    
T  3169271 cttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacacttaagcgtg 3169359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 17628575 - 17628669
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctga 207  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||| |||| ||  | ||||||| ||||||||| |||||| ||||    
T  17628575 gcttataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttgagcgtgcctga 17628669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 9423934 - 9423849
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaag 198  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||| ||||| ||||||| | |||| |||||    
T  9423934 gcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaatttcacaattaag 9423849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 31817928 - 31817839
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||| ||||||||||||||||| |||||||||  ||||  ||||||||| || |||||||||||    
T  31817928 gcttataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaacttcatagttaagcgtg 31817839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 52048740 - 52048659
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaa 197  Q
    |||||||||||||||||||| || ||||  |||||||||||||||| ||  |||  |||||| |||||||||||||||||||    
T  52048740 ttataagaattgtttgatactacgtatactaacaagatgcatcttcattttgtaagtcattccataagaactccacagttaa 52048659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 33764929 - 33765013
Alignment:
Q  119 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| | | ||||||| ||||||||||||||||| |||  |||||||||| |||||||||| |||| |||||||||    
T  33764929 taagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcacacttaagcgtg 33765013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 27578531 - 27578444
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| |||| | | ||||||||||||||||||||||||| |||||||| | ||  | |||||||||||| |||||||||||    
T  27578531 ttataagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtg 27578444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 14351859 - 14351949
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||| ||||| || |||| ||| | ||||||||||||||||||||||| ||| |||| |  |||| |||||||||||||||||||||||||    
T  14351859 gcttgtaagagttttttggtactatctatatcaacaagatgcatcttctttttggtatcctattccataagaactccacagttaagcgtgt 14351949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 8467875 - 8467826
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  8467875 cttataagaattgtttggtactacctataccaacaagatgcatcttcttt 8467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20306237 - 20306151
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||  ||| |||| | ||||  ||||||||| ||| ||||||||||    
T  20306237 gcttataagaattgtttggtactatctatatcaacaagatgcatct--ttttggtatcccatttcataagaactacacggttaagcgtg 20306151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 41869983 - 41870032
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  41869983 cttataagaattgtatgatactacctatatcaacaagacgcatcttcttt 41870032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 17029403 - 17029479
Alignment:
Q  123 aattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaag 198  Q
    ||||||||  ||| ||||||||||||||||||||| || |||| |||| || |||| ||||||||||||||||||||    
T  17029403 aattgtttagtactacctatatcaacaagatgcatattacttttggtaccttattccataagaactccacagttaag 17029479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 21067799 - 21067884
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| | | ||||||||||||||||| ||  || ||| |||||  ||||| ||||||||| ||||||||||||||    
T  21067799 cttataagaattgtttggtgctacctatatcaacaagataca--tttttttggtagtccattccataagaacttcacagttaagcgtg 21067884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 24271623 - 24271552
Alignment:
Q  117 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactc 188  Q
    |||||||||| |||||||| |||||||  |||||||||||| || ||| |||||| ||||| ||||||||||    
T  24271623 tataagaattatttgatactacctatacgaacaagatgcatattttttgggtagcccattccataagaactc 24271552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 23976293 - 23976245
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    |||||||||||||||| ||| |||||||  |||||||||||||||||||    
T  23976293 ttataagaattgtttggtactacctatactaacaagatgcatcttcttt 23976245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 31817472 - 31817384
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| ||||||||| ||| ||||||| |||||| |||||||||| |||| | ||| |||||  ||||||||| ||| ||||||||||    
T  31817472 ttataataattgtttggtactacctataccaacaaaatgcatcttcttttccgcagcccattccttaagaactctacaattaagcgtgt 31817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 42838690 - 42838780
Alignment:
Q  117 tataagaattgtttgataccacctatatcaacaagatgcatct---tctttcggtagctcattctataagaac-tccacagttaagcgtgt 203  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||||   | ||||| ||| |||||| |||||||| | |||||||||||||||    
T  42838690 tataaaaattgtttggtactacctatatcaacaaaatgcatctttctttttcgatagttcattccataagaactttcacagttaagcgtgt 42838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 53391950 - 53391990
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagat 153  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  53391950 tgcttataaaaattgtttgataccatctatatcaacaagat 53391990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 4186224 - 4186315
Alignment:
Q  107 aaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 197  Q
    ||||| |||||||||||||  |||| ||| ||||| || |||||||| ||||||| ||| |||||| ||||  ||||||||| |||||||||    
T  4186224 aaggaatgcttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaactacacagttaa 4186315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 43929039 - 43928989
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||| |||||||||||| ||| || |||| ||||||||||||||||||||    
T  43929039 gcttacaagaattgtttggtactacatataccaacaagatgcatcttcttt 43928989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 11828509 - 11828472
Alignment:
Q  165 cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  11828509 cggtagctccttccataagaactccacagttaagcgtg 11828472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 34554492 - 34554577
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaa 197  Q
    |||||||||||||||||||| || ||||||| || |||||||||| ||  ||| |||||  ||||| ||||||||| || ||||||    
T  34554492 tgcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaacttcatagttaa 34554577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 27578984 - 27578896
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| || ||||||||  |||  ||||||| |||| ||||| |  || ||||||||| ||||||||||||||    
T  27578984 cttataagaattgtttggtactacatatatcaattagacacatcttcttttcagtagccctatccataagaactacacagttaagcgtg 27578896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 3886695 - 3886593
Alignment:
Q  102 ggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcg 200  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  3886695 ggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcg 3886596  T
Q  201 tgt 203  Q
    |||    
T  3886595 tgt 3886593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2193880 - 2193969
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2193880 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2193969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2474023 - 2474112
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2474023 gcttataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2474112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 8642116 - 8642027
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8642116 gcttataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 8642027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 17445537 - 17445448
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctt-tcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  17445537 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccacagttaagcgtg 17445448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 34371668 - 34371765
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  34371668 gaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaagcgtg 34371765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 34372124 - 34372221
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  34372124 gaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtg 34372221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 2474470 - 2474558
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2474470 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2474558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 42788727 - 42788639
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  42788727 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccacagttaagcgtg 42788639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 189132 - 189218
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  189132 gcttataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaagc 189218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 22556600 - 22556694
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctga 207  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||    
T  22556600 gcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtggctga 22556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 34867854 - 34867943
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||| |||||||||||    
T  34867854 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccatagttaagcgtg 34867943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 22557033 - 22557127
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctga 207  Q
    ||||||| |||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||    
T  22557033 gcttatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtgcctga 22557127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 1821970 - 1822059
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||| |||||||||    
T  1821970 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaagcgtg 1822059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 10927485 - 10927396
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||| ||||    
T  10927485 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaaacgtg 10927396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 21886228 - 21886143
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  21886228 gcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaaagttaag 21886143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 20039556 - 20039472
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||||| ||||| |||||||||| |||||||||    
T  20039556 gcttataagaattgtttggtactacctatatcaacaagatgcattttcttttggtagcccattccataagaactctacagttaag 20039472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 39147004 - 39147092
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||||| || ||||| |||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  39147004 cttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 39147092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 10927028 - 10926939
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| |||| |||||  ||||| ||||||||||||||||||| ||||    
T  10927028 gcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactccacagttaaacgtg 10926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 27646917 - 27646828
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||| ||| |||||| ||||  ||||||||||||||||||||||||    
T  27646917 gcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagttaagcgtg 27646828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 3887138 - 3887050
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||    
T  3887138 cttatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaagcgtg 3887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 18304495 - 18304581
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||  ||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||    
T  18304495 gcttatataaattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaattccacagttaagc 18304581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 8391402 - 8391315
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||    
T  8391402 cttataagaattgtttggtact-cctgtatcaacaagatgcatcttcttttcggtagctaattccataagaactccatagttaagcgtg 8391315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 29680166 - 29680099
Alignment:
Q  137 acctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||||||||||| ||| |||||| ||||  |||||||||||||||||||||||||    
T  29680166 acctatatcaacaagatgcatcttctttttggtagcccattacataagaactccacagttaagcgtgt 29680099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 4673552 - 4673466
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcg 200  Q
    |||||||||||| |||| || ||||| |||||||||||||||| ||| ||| ||||  |||||| ||||||||||||||||||||||    
T  4673552 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaagcg 4673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 15513094 - 15513005
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| | ||| ||| ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| |||| ||||    
T  15513094 tgcttataagaattgttgg-tactaccaatatcaacaagatgcatcttctttttggtatctcattccataagaactccacaattaaacgtg 15513005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 20858623 - 20858538
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||    ||||||||||||||||| |||||||| | ||||||||||| |||||||||||| |||||||    
T  20858623 gcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaag 20858538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 30684638 - 30684549
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| |||||||||| ||| | |||||  |||||||||||||||| ||||||||| |||  | ||||||||||||||||||||||||    
T  30684638 gcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgtg 30684549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 30719887 - 30719798
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| |||||||||| ||| |||||||  |||||||||||||||| ||||||||| |||  | |||||||||||||| |||||||||    
T  30719887 gcttatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgtg 30719798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 11757337 - 11757274
Alignment:
Q  140 tatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| ||||||||||||| |||||| ||| || ||||||||||||||||||||||||    
T  11757337 tatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtg 11757274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 18750276 - 18750201
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcca 190  Q
    |||||| ||||||||| ||| ||||||| ||| ||||||||||||| ||||||||||| |||| ||||||||||||    
T  18750276 ttataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactcca 18750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 4658073 - 4657992
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtta 196  Q
    |||||||| ||||||||||| ||||||| |||||| |||||||||| ||| |||||  ||||| ||||||||| ||||||||    
T  4658073 ttataagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataagaacttcacagtta 4657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 24182327 - 24182239
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||||||||||||||| | ||  | |||| ||||  |||||||||||||    
T  24182327 gcttataagaattatttggtactatctataccaacaagatgcatcttctttcggtaccccaaaccataataacttaacagttaagcgtg 24182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 42429201 - 42429259
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    |||||||  ||||||||||||||||| ||| |||| ||||||||| |||||| ||||||    
T  42429201 gaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattcttt 42429259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 2058737 - 2058696
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgca 156  Q
    |||||| |||||||||| ||| ||||||||||||||||||||    
T  2058737 cttatatgaattgtttggtactacctatatcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 5066972 - 5066923
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||||||||||||| ||  | ||||||||||||||||||| ||||||    
T  5066972 cttataagaattgtttggtattatctatatcaacaagatgcattttcttt 5066923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 16370789 - 16370740
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||||||||||||| ||| || ||||||||||||| | |||||||||    
T  16370789 cttataagaattgtttggtactacttatatcaacaagacgtatcttcttt 16370740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 32574740 - 32574651
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| |||||||||| ||| |||||||  ||||| ||||||||| |||| |||||| ||  |||||| |||| || |||||||||||    
T  32574740 gcttataggaattgtttggtactacctatacaaacaaaatgcatctttcttttggtagcccaaactataataacttcatagttaagcgtg 32574651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 43356701 - 43356652
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||||||||||||| ||| ||||| | |||||| |||||||||||||    
T  43356701 cttataagaattgtttggtacaacctaaaccaacaatatgcatcttcttt 43356652  T

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Target: scaffold0499 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 2133 - 2044
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2133 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2044  T

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Target: scaffold0020 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 107545 - 107456
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  107545 gcttataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 107456  T

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Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 10844947 - 10845036
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  10844947 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 10845036  T

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Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 22026443 - 22026532
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22026443 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 22026532  T

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Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 12827336 - 12827247
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12827336 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 12827247  T

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Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 25144836 - 25144925
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  25144836 gcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 25144925  T

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Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 22549076 - 22548988
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  22549076 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaagcgtg 22548988  T

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Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 22548629 - 22548542
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  22548629 ttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaagcgtg 22548542  T

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Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 27925965 - 27926052
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  27925965 ttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 27926052  T

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Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 10844697 - 10844608
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||| ||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10844697 gcttataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 10844608  T

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Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 41659186 - 41659097
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||    
T  41659186 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaagcgtgt 41659097  T

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Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2044122 - 2044211
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||| ||||| |||| |||||||||||||||||||    
T  2044122 gcttataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacagttaagcgtg 2044211  T

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Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 6464992 - 6464903
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||||||||||    
T  6464992 gcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataacaactccacagttaagcgtg 6464903  T

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Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 25147600 - 25147689
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||    
T  25147600 gcttataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaatcgtg 25147689  T

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Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 25148031 - 25148120
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| |   ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  25148031 gcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtg 25148120  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 27022420 - 27022331
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||  |||||| ||||||||| ||||||||||||||||||||||||    
T  27022420 gcttataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactccacagttaagcgtg 27022331  T

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Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 17103146 - 17103234
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  17103146 cttataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataagaactccacggttaagcgtg 17103234  T

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Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 12100755 - 12100844
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||| ||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||    
T  12100755 gcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataagaacttcacagttaagcgtg 12100844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 32292453 - 32292550
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| ||||||||||||||||||| ||| | ||||||||||||| ||||||||| ||| | |||| ||||| ||||||||||||||||||||||||    
T  32292453 gaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaactccacagttaagcgtg 32292550  T

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Target: chr8; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 34308561 - 34308472
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||| |||||||||    
T  34308561 gcttataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaagcgtg 34308472  T

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Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 28453403 - 28453491
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||||||  |||||| ||||| |||||||||| |||||||||||||    
T  28453403 cttataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataagaactctacagttaagcgtg 28453491  T

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Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 8080420 - 8080335
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| ||||| ||||||||| ||||||||||||||    
T  8080420 ataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttcacagttaagcgtg 8080335  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 21316191 - 21316106
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||| || |||| ||||||||||  ||||||||||||||||||||    
T  21316191 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataagaactccacagttaag 21316106  T

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Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 41913034 - 41913123
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| | | ||||||||||||||||||| ||||| ||| |||||| ||||| ||||||||||| ||||||||||||    
T  41913034 gcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataagaactccgcagttaagcgtg 41913123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 22840610 - 22840530
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagt 194  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||    
T  22840610 cttataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataagaactccacagt 22840530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 27819324 - 27819238
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||| ||| |||||||||||||| |||||||||| ||||  |||||||||| |||| ||||||||||||||| ||||    
T  27819324 ataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaactccacagttaagtgtgt 27819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 28375136 - 28375038
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctgaattc 211  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||| ||| |||| | || || |||||||||||  |||||||    
T  28375136 gcttataagaattgtttggtactacctacatcaacaagatgcatcttcttttcggtagctctttccataacagcttcatagttaagcgtgcttgaattc 28375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 33852339 - 33852251
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| |||||||| ||||||||| |||||| ||| |||||| ||||| ||||||||| |||| |||||||||    
T  33852339 cttataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataagaacttcacaattaagcgtg 33852251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 34309021 - 34308928
Alignment:
Q  114 gcttataagaattgtttgataccacctatat----caacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| |||||| ||| ||||||||    |||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||    
T  34309021 gcttataagaactgtttggtactacctatatatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacagttaagcgtg 34308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 31283719 - 31283648
Alignment:
Q  128 tttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 198  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaag 31283648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 15819105 - 15819014
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 197  Q
    |||||| |||||| || ||||||||| ||| || |||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||||    
T  15819105 gaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaact-cacagttaa 15819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 30527563 - 30527479
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    ||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |||||| ||||  ||||||||||||||||||||    
T  30527563 cttataagaattgtttggtaccacttacatcaataagatacatcttcttttgggtagcccatttcataagaactccacagttaag 30527479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 15567638 - 15567548
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||||| || || |||| ||||||||| ||||||| ||| ||||| |||||  ||||||||||| ||||||| |||||    
T  15567638 gcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactccgcagttaatcgtgt 15567548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 27021961 - 27021911
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  27021961 gcttataagaattgtttggtactacttatatcaacaagatgcatcttcttt 27021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 1297072 - 1297161
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| ||| ||||||| |||||||||  || ||| |||||||| | |||| ||||||||||||| ||||||| ||||    
T  1297072 cttataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccattatataagaactccatagttaagtgtgt 1297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 3745166 - 3745254
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||| |||||  ||| ||||||| |||||| |||||||||| ||| |||||| ||||| |||| ||||||||||| |||||||    
T  3745166 cttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacagtcaagcgtg 3745254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 22705238 - 22705282
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  22705238 ttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 25307855 - 25307914
Alignment:
Q  139 ctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||||| |||||| ||| |||||| |||||| ||||||||||||||||||||    
T  25307855 ctatatcaacaagatacatctttttt-ggtagcccattctgtaagaactccacagttaagc 25307914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 3744703 - 3744788
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| || ||||||| |||||| ||||| |||| ||| |||||| ||||  |||||||||| ||| ||||||    
T  3744703 cttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaagc 3744788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 30334989 - 30334940
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  30334989 cttataaaaattgtttgatactacctataccaacaagatacatcttcttt 30334940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 6466775 - 6466820
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    ||||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  6466775 cttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 15568086 - 15568041
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||||    
T  15568086 cttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 28561810 - 28561899
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28561810 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 28561899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 31284358 - 31284269
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31284358 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 31284269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 13150636 - 13150547
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  13150636 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 11180116 - 11180027
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  11180116 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 11180027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 39653228 - 39653313
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  39653228 gcttataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgagaactccacagttaag 39653313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 50347810 - 50347899
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  50347810 gcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtg 50347899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 25239159 - 25239069
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  25239159 gcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgt 25239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 8067344 - 8067433
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatc-ttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||  ||| |||||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||    
T  8067344 gcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaagcgtg 8067433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 13150181 - 13150092
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| |||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  13150181 gcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtg 13150092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 14814013 - 14814102
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||| ||||||||| ||| ||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  14814013 gcttataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtg 14814102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 14820218 - 14820307
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  14820218 gcttataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtg 14820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 16811445 - 16811534
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| |||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  16811445 gcttataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccacagttaagcgtg 16811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 27187412 - 27187323
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||  ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  27187412 gcttataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 27187323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 32227564 - 32227653
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  32227564 gcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 32227653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 32386816 - 32386727
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||    
T  32386816 gcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataagaactccacagttaagcgtg 32386727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 39641002 - 39641091
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  39641002 cttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgt 39641091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 4067441 - 4067353
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  4067441 cttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcgtg 4067353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 20885198 - 20885110
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||  ||||| ||||| |||||||||||||| |||||||||    
T  20885198 cttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaactccacaattaagcgtg 20885110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 2911161 - 2911248
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| ||||||||||||  ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  2911161 ttataaaaattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataagaactccacagttaagcgtg 2911248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 32227303 - 32227214
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  32227303 gcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtg 32227214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 41472364 - 41472453
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||| ||||    
T  41472364 gcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactccacggttaaacgtg 41472453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 25238765 - 25238677
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| | || |||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  25238765 cttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 25238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 25802626 - 25802540
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||| ||||| ||||||| |||||||||||||||||    
T  25802626 ataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgt 25802540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 25230330 - 25230241
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| |||| ||| ||||||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||| |||||    
T  25230330 gcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtg 25230241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 25237917 - 25237828
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| |||| ||| ||||||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||| |||||    
T  25237917 gcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtg 25237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 30529751 - 30529840
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||| || |||||||||||    
T  30529751 gcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaacttcatagttaagcgtg 30529840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 37045091 - 37045188
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| ||||||||||||||||||| ||  ||||||||||||||| ||||||||| ||| |||| |  |||| ||||||||||||||||||||||||    
T  37045091 gaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactccacagttaagcgtg 37045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 25248168 - 25248264
Alignment:
Q  107 aaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||| |||||||| ||| ||||||    
T  25248168 aaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataataactccacggttcagcgtg 25248264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 32797016 - 32796936
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagt 194  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||| ||||| ||||||||||||||||    
T  32797016 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagt 32796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 25230785 - 25230698
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||| ||| |||||||||    
T  25230785 ttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtg 25230698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 25238372 - 25238285
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||| ||| |||||||||    
T  25238372 ttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtg 25238285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 7493945 - 7494031
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||| |||| ||| || |||||||||||||||||||||| |||||||||| ||  | |||||||||||||| ||||||    
T  7493945 gcttataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataagaactccacatttaagc 7494031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 16810989 - 16811074
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    ||||||||||||||||   ||| | ||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  16810989 gcttataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctcattccataagaacttcacatttaag 16811074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 29224389 - 29224477
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| |||||||  |||||||||||||||| |||||||||| ||  | ||||||||| |||| |||||||||    
T  29224389 cttataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaagcgtg 29224477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 41474062 - 41474150
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||  ||||||||||||||||  || ||| ||| ||| | ||||||||||| ||||||||||| |||||||    
T  41474062 cttataagaattgtttgatacttcctatatcaacaagattgatattctttttggtggatcattctataaaaactccacagtcaagcgtg 41474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 7477255 - 7477341
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||| |||| ||| || |||||||||||||| ||||||| |||||||||| ||  | |||||||||||||| ||||||    
T  7477255 gcttataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataagaactccacatttaagc 7477341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 26310069 - 26309987
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaa 197  Q
    ||||||||||| |||| ||| || |||| ||| ||||||||||||||||  |||||||||||| || ||||||| ||||||||    
T  26310069 ttataagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactcgacagttaa 26309987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 25803081 - 25802997
Alignment:
Q  119 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||| ||| |||||||  ||||||||| |||||| |||||||| | ||||  |||||||||||  |||||||||||    
T  25803081 taagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataagaactccgtagttaagcgtg 25802997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 31104041 - 31103955
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtag--ctcattctataagaactccacagttaag 198  Q
    ||||||||||||||||||||| | ||||| |||| |||||||| ||| ||| |||||  ||||||| ||||||||| |||| |||||    
T  31104041 cttataagaattgtttgatactatctataccaactagatgcattttctttttggtagctctcattccataagaacttcacatttaag 31103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 3890046 - 3890088
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctt 3890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20054162 - 20054073
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20054162 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20054073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20054618 - 20054529
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20054618 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20054529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20055074 - 20054985
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20055074 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20054985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20055530 - 20055441
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20055530 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20055441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20055986 - 20055897
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20055986 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20055897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20056442 - 20056353
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20056442 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20056353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20057345 - 20057256
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20057345 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20057256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20057801 - 20057712
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20057801 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20057712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20845743 - 20845654
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20845743 gcttataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20845654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 20056898 - 20056808
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  20056898 gcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 20056808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 50002789 - 50002699
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  50002789 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaagcgtgt 50002699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 20060422 - 20060337
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20060422 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaag 20060337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 20061273 - 20061188
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20061273 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaag 20061188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 38340970 - 38341059
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  38340970 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaagcgtg 38341059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 43057147 - 43057058
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  43057147 gcttagaagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtg 43057058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 52250270 - 52250359
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  52250270 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 52250359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 2634992 - 2635078
Alignment:
Q  118 ataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2634992 ataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataagaactccacagttaagcgtgt 2635078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 16452015 - 16451926
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  16452015 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtg 16451926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 16461168 - 16461079
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  16461168 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtg 16461079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 43057605 - 43057516
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  43057605 gcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtg 43057516  T

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Target: chr1; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 50002367 - 50002285
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtt 195  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  50002367 gcttataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtt 50002285  T

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Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 35759690 - 35759601
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||| ||||    
T  35759690 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtg 35759601  T

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Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 51372956 - 51372867
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||  ||| ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  51372956 gcttataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataagaactccacagttaagcgtg 51372867  T

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Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 12883580 - 12883678
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| | ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||| |||| ||||||||||||||| ||||    
T  12883580 gaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaaactccacagttaagtgtgt 12883678  T

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Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 30873027 - 30872946
Alignment:
Q  119 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||  |||||||||||||||||||| ||||||    
T  30873027 taagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataagaactccacaattaagc 30872946  T

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Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 35760996 - 35760907
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||| || ||||||||  |||||||||||    
T  35760996 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaagcgtg 35760907  T

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Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 46693817 - 46693728
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||  |||| |||||||||||||||||||    
T  46693817 gcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaagcgtg 46693728  T

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Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 2328379 - 2328463
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 197  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||| ||| |||||| ||||| |||||||||||||||||||    
T  2328379 gcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 2328463  T

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Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 12728056 - 12728142
Alignment:
Q  115 cttataagaattgtttgat-accacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  12728056 cttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccacagttaagc 12728142  T

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Target: chr1; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 50003156 - 50003068
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| ||||||| | ||| ||||||||||||||||||||||||| |||| ||||||||||| | ||||||| ||||||||||||||    
T  50003156 cttataataattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcacagttaagcgtg 50003068  T

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Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 16907298 - 16907388
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||| |||| || |  ||||||| |||||||||| ||||||||||||    
T  16907298 gcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaagaactccatagttaagcgtgt 16907388  T

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Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 31822743 - 31822657
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgt 201  Q
    ||||||||||| |||| ||| || ||||||||||| |||||||||| ||||||||||||| || | |||||||||||||||||||||    
T  31822743 ttataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccacagttaagcgt 31822657  T

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Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 23180786 - 23180883
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttct-ttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| || |||||||||||| ||| ||| |||||||||||||||||| ||||||| |||| |||| ||||| ||||||| |||||| |||||||||    
T  23180786 gaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaattaagcgtg 23180883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 52250641 - 52250696
Alignment:
Q  148 caagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52250641 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 52250696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 52250978 - 52251033
Alignment:
Q  148 caagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52250978 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 52251033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 16440660 - 16440576
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||| |||||| ||| ||| ||| ||||||||||||| ||| ||| ||||||||||||||||| |||| || |||||||    
T  16440660 cttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtagctcattctataataacttcaaagttaag 16440576  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 7548156 - 7548243
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgt 201  Q
    ||||||| ||||||||| ||  | ||||||||||||||||||| ||| ||| |||||| ||||  |||||||||||||| ||||||||    
T  7548156 cttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaactccacaattaagcgt 7548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 10820658 - 10820702
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    |||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  10820658 ttataagaattgtttggtactacctatatcaataagatacatctt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 31823161 - 31823097
Alignment:
Q  119 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataa 182  Q
    |||||||| |||| ||| ||||||||||| || |||||||||| ||| |||||||||||| ||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtagctcattccataa 31823097  T

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Target: scaffold0047 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 18215 - 18128
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  18215 cttataagaattgtttgatactacctatatcaacaagatgcatctttttttggtagctaattccataagaactccacagttaagcgtg 18128  T

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Target: scaffold0047; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 17680 - 17591
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||| |||| |||||| ||| ||||||||| |  ||||||||||||||||||||||||    
T  17680 gcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaactccacagttaagcgtg 17591  T

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Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 30966756 - 30966843
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30966756 ttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 30966843  T

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Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 1912591 - 1912677
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  1912591 ttataagaattgtttggtactacctatatcaacaagatgcatcttcttttggtagcccattccataagaactccacagttaagcgtg 1912677  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 8256590 - 8256679
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8256590 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 8256679  T

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Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 29804746 - 29804835
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  29804746 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 29804835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 41754353 - 41754442
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41754353 gcttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 41754442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 33175022 - 33175112
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||    
T  33175022 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtgt 33175112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 33771065 - 33771151
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  33771065 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagc 33771151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 5399899 - 5399810
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||    
T  5399899 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtg 5399810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 11388244 - 11388340
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| |||||| || ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  11388244 gaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 11388340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 24818390 - 24818479
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  24818390 gcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtg 24818479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 25434138 - 25434049
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||    
T  25434138 gcttataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaactccacagttaagcgtg 25434049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 30966298 - 30966387
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||    
T  30966298 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaagcgtg 30966387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 33174567 - 33174656
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  33174567 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtg 33174656  T

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Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 16379002 - 16379090
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  16379002 cttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtg 16379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 18098961 - 18098874
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||||    
T  18098961 tgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccatagttaagc 18098874  T

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Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 16379458 - 16379547
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  16379458 cttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgt 16379547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 25338079 - 25337990
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||    
T  25338079 gcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtg 25337990  T

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Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 38899002 - 38898905
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||| | ||||  ||||||||||||||||||||||||    
T  38899002 gaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataagaactccacagttaagcgtg 38898905  T

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Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 1707106 - 1707195
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| |||   |||||||||||||||||||| ||||    
T  1707106 cttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccacagttaagagtgt 1707195  T

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Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 11394591 - 11394686
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| |||||| || ||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||    
T  11394591 gaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtg 11394686  T

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Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 83080 - 83171
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||| ||||| ||| ||||||| |||||||||| ||||| |||  |||||||||||| |||||||||| ||||||||||||||    
T  83080 tgcttataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataagaactctacagttaagcgtgt 83171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 29259702 - 29259613
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| | ||||||||| ||| || |||||||||||||||||||||| |||||||||||||||  ||||||||| || |||||||||||    
T  29259702 gcttattaaaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaagcgtg 29259613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 30963801 - 30963713
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||||| |||||| ||  | |||| |||||||||||||||||||    
T  30963801 cttataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataataactccacagttaagcgtg 30963713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 8073957 - 8074042
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagc 199  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||  ||||| ||||  |||||||||||| || |||||    
T  8073957 cttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccatagataagc 8074042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 15619962 - 15620051
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||||||  || | | || || |||||||||||||| |||||||||    
T  15619962 gcttataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtg 15620051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 13191039 - 13191121
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtta 196  Q
    ||||||||||||||||| ||| || |||| ||||||||||||||||| ||| |||||  |||| ||||||||||||| |||||    
T  13191039 cttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactccatagtta 13191121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 27883016 - 27882918
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcg-gtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| ||||||||||||||||||| ||  | ||||||||| ||||||||||||||||   ||||  | ||| |||||||||||||| ||||||||||    
T  27883016 gaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaactccacaattaagcgtgt 27882918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 20502087 - 20502175
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| |||   ||||||||||||||||| |||| ||| |||||| ||||  ||||||||| |||| |||| ||||    
T  20502087 gcttataagaattgtttggtactttctatatcaacaagatgcttctttttttggtagcccatttcataagaacttcacaattaaacgtg 20502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 1953222 - 1953269
Alignment:
Q  117 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  1953222 tataagaattgtttggtactacctatatcaactagatgcatcttcttt 1953269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 30963345 - 30963299
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  30963345 gcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 30961964 - 30961876
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcat-cttctttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||| ||| ||| ||| |||||||||||||||||||||  || ||||||||||  |  | ||||||||||||||||||| ||||    
T  30961964 cttataagatttgattggtactacctatatcaacaagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtg 30961876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 15639798 - 15639848
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    ||||||| |||||||||| ||| |||||||||||||| || ||||||||||    
T  15639798 gcttataggaattgtttggtactacctatatcaacaacatacatcttcttt 15639848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 18447999 - 18447954
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatctt 160  Q
    ||||||||||||||||| ||| || | |||||||||||||||||||    
T  18447999 cttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 32377749 - 32377712
Alignment:
Q  162 tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||| | |||||||||||||||||||    
T  32377749 tttcggtagctcattccaaaagaactccacagttaagc 32377712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 1284 - 1373
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1284 gcttataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 105784 - 105873
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  105784 gcttataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 105873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 13492396 - 13492485
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  13492396 gcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtg 13492485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 13492853 - 13492942
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  13492853 gcttataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 7911943 - 7912025
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtta 196  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7911943 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 7912025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 15929646 - 15929736
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||| |||| ||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  15929646 gcttataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 15929736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 13191595 - 13191506
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||    
T  13191595 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaagcgtg 13191506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 16520032 - 16520121
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| ||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16520032 gcttatgagatttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 16520121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 17027613 - 17027524
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  17027613 gcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 17027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 20850385 - 20850474
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  20850385 gcttataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaagcgtg 20850474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20896770 - 20896681
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||    
T  20896770 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactccacggttaagcgtg 20896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 2681297 - 2681209
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  2681297 cttataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaagcgtg 2681209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 6330993 - 6330905
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  6330993 cttataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 6330905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 3652550 - 3652634
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 197  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||    
T  3652550 gcttataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataagaactccacagttaa 3652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 9352127 - 9352215
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||| | ||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  9352127 cttataatatttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 9352215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 17850981 - 17851071
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||| ||||||  |||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  17850981 tgctgataagatatgtttggtactacctttatcaacaagatgcatcttctttctggtagcccattctataagaactccacagttaagcgtg 17851071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 11062349 - 11062438
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  11062349 gcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 11062438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 20126264 - 20126175
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||| |||||| |||||||||    
T  20126264 gcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaattccacaattaagcgtg 20126175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 20735759 - 20735844
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||||||    
T  20735759 gcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtccattctataaaaactccatagttaag 20735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 7912375 - 7912463
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||| |||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||| ||||    
T  7912375 cttatatgaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaaacgtg 7912463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 27334225 - 27334301
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcc 189  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  27334225 gcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27334301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 27394965 - 27395041
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcc 189  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  27394965 gcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27395041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 17731194 - 17731102
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagat----gcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  17731194 cttataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattctttaagaactccacatttaagcgtg 17731102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 17851438 - 17851527
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||  |||||| ||| |||| |||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||    
T  17851438 gcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaactccacaattaagcgtg 17851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 23986399 - 23986314
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||  | ||||||||| ||||||||||    
T  23986399 gcttataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttcacagttaag 23986314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 9440391 - 9440306
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||||||| | ||| || |||||||||||||||||| ||| ||||||||||||| || ||||||||| ||||||||||    
T  9440391 gcttataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataagaacttcacagttaag 9440306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 28583027 - 28583112
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 198  Q
    ||||||||||||| |||||||| | |||||||||||||||||||| ||||| |||||| |||||| ||||||| ||||||| ||||    
T  28583027 gcttataagaattatttgatacgatctatatcaacaagatgcatcatctttccggtagttcattccataagaaatccacagctaag 28583112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 2890919 - 2890832
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||| |  || ||||||||||| ||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  2890919 ttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataagaactccacagttaagcgtg 2890832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 23776506 - 23776592
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgt 201  Q
    ||||||||||| || || ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||| ||||||||    
T  23776506 cttataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcaca-ttaagcgt 23776592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 2720645 - 2720560
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc--ggtagctcattctataagaactccacagttaag 198  Q
    ||||||||||||||||| ||| |||||||| |||||||  |||||| |||   |||||||||||| ||||||||||||||||||||    
T  2720645 cttataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataagaactccacagttaag 2720560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 21312035 - 21312124
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| ||| |||||| ||||  ||||||| |||| |||||| ||||    
T  21312035 gcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataagaaatccatagttaaacgtg 21312124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 21311580 - 21311668
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||  ||||| || |||||||| ||||||| ||| || ||||||||| ||||||||||| ||||||||||||    
T  21311580 cttataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaactccgcagttaagcgtg 21311668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 15929263 - 15929338
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactc 188  Q
    |||||||||||||||||| ||   |||||||||| ||||||||| ||| |||||||||||||||| ||||||||||    
T  15929263 gcttataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataagaactc 15929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 17205405 - 17205479
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactcca 190  Q
    |||||||||||||||| ||| |||| || ||||||||| |||||| ||| |||||| ||||| ||||||||||||    
T  17205405 ttataagaattgtttggtactacctttaccaacaagattcatcttgttttggtagcccattccataagaactcca 17205479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 28780209 - 28780263
Alignment:
Q  149 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  28780209 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtg 28780263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 31821782 - 31821704
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatc-ttctttcggtagctcattctataag 183  Q
    |||||| |||||||||||||| |||| ||| | |||||||||||||||||||| || ||| |||||||||||| |||||    
T  31821782 gaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 1991617 - 1991701
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaa 197  Q
    ||||| |||||||||||| ||  || ||| | ||||||||||||||||||| ||||||||||||  ||||||||| |||||||||    
T  1991617 gcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacagttaa 1991701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 14771800 - 14771716
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaag 198  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||| ||||||  ||||    |||| ||||||||||||||||||||    
T  14771800 cttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacagttaag 14771716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 28065920 - 28065831
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttc----ggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| ||| | || ||||||||||||||||||| |||     ||||||| |||| |||||||||||||| ||||||    
T  28065920 gcttataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaactccacaattaagc 28065831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 9440947 - 9440849
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 203  Q
    |||||| |||||||||||||| |||| ||| || | |||||||||||||||| ||| |||| ||||| ||  | ||||||||| |||||||||| ||||    
T  9440947 gaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtagcccaaaccataagaacttcacagttaagtgtgt 9440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 33775084 - 33774994
Alignment:
Q  116 ttataagaattgtttgataccacctatatcaacaaga--tgcatcttctttcgg-tagctcattctataagaactccacagttaagcgtgt 203  Q
    ||||||||||||| || | | ||||||||||||||||  ||||||||||||  | |||  ||||| |||||||||||||||||||| ||||    
T  33775084 ttataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataagaactccacagttaagtgtgt 33774994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 20732642 - 20732727
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    ||||||||||||| |||| ||| |||||||| || || |||||| ||| |||||||||| ||||| |||| ||||| || ||||||    
T  20732642 gcttataagaattatttggtactacctatattaataatatgcatattcttttcggtagcccattcaataaaaactctacggttaag 20732727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 19030 - 19119
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  19030 gcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 19119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2806 - 2895
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  2806 gcttataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtg 2895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 10364 - 10453
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  10364 gcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtg 10453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 5e-26; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 162759 - 162671
Alignment:
Q  115 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  162759 cttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaagcgtg 162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 69905 - 69814
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatc-ttctttcggtagctcattctataagaactccacagtta 196  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||||| |||||||| || ||||  |||||||||| ||||||||||||||||||    
T  69905 gaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataagaactccacagtta 69814  T

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Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 163167 - 163224
Alignment:
Q  146 aacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  163167 aacaagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtg 163224  T

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Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 163181 - 163127
Alignment:
Q  149 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  163181 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtg 163127  T

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Target: scaffold0333 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 4631 - 4710
Alignment:
Q  120 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 198  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  4631 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataagaactccacagttaag 4710  T

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Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 5091 - 5174
Alignment:
Q  120 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  5091 aagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 5174  T

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Target: scaffold0040 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 2292 - 2203
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||||| | |||||||||||    
T  2292 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaatagttaagcgtg 2203  T

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Target: scaffold0002 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 154821 - 154910
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||| | ||| |||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  154821 gcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtg 154910  T

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Target: scaffold0389 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 13592 - 13526
Alignment:
Q  137 acctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13592 acctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13526  T

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Target: scaffold0005 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 245150 - 245228
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccaca 192  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |  | ||||||||||||||    
T  245150 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttcggtagcctaaaccataagaactccaca 245228  T

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Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 245578 - 245668
Alignment:
Q  113 tgcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||||  |  | ||||||||||||||||||||||||    
T  245578 tgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtg 245668  T

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Target: scaffold0557 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 2169 - 2255
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||||||||||||||| |||  ||||||| |||||||||||||||| ||| |||||| |||||  ||||||||||||||||||||    
T  2169 gcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacagttaagc 2255  T

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Target: scaffold0664 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 4072 - 3993
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataaga 184  Q
    |||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||| ||| |||||| |||| |||||||    
T  4072 gaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggtagcccattttataaga 3993  T

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Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 14797 - 14891
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 199  Q
    |||||| ||||||||||||||||||| ||  ||||||||||| |||||||||| || ||||||||  |||||  ||||||||| |||||||||||    
T  14797 gaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcacagttaagc 14891  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 142364 - 142306
Alignment:
Q  106 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 164  Q
    |||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  142364 gaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 142306  T

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Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 23737 - 23785
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttct 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23737 gcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

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Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 14749 - 14695
Alignment:
Q  149 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 202  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  14749 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtg 14695  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 26134 - 26211
Alignment:
Q  114 gcttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcca 190  Q
    |||||||  |||| |||| ||| || |||||||||| ||||||||||| ||| ||||||||||| |||||||||||||    
T  26134 gcttatacaaattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactcca 26211  T

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