View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0953_low_79 (Length: 276)
Name: NF0953_low_79
Description: NF0953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0953_low_79 |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 29789755 - 29790001
Alignment:
| Q |
1 |
agggtagcctttaatccggggaaataaaaaatattgaatgggtcatgcatcgttttctaatttatgagtgacgtacaagttgcacatgcaattgaaagtg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29789755 |
agggtagcctttaatccggggaaataaaaaatattgaatgggtcatgcatcgttttctaatttatgagtgacgtacaagttgcacatgcaattgaaagtg |
29789854 |
T |
|
| Q |
101 |
accctttaaatagaacataacagcaaatctaaatctcacttatgatgcttggtttgtttaaccattgtaagcaaacaatcatattaatctactttaatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29789855 |
accctttaaatagaacataacagcaaatctaaatctcacttatgatgcttggtttgtttaaccattgtaagcaaacaatcatattaatctactttaatta |
29789954 |
T |
|
| Q |
201 |
attgttcatgtgcaacataccccacgtcgtgcatcttgccttccaac |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29789955 |
attgttcatgtgcaacataccccacgtcgtgcatcttgccttccaac |
29790001 |
T |
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