View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0954_low_30 (Length: 295)

Name: NF0954_low_30
Description: NF0954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0954_low_30
NF0954_low_30
[»] chr2 (50 HSPs)
chr2 (51-234)||(33625185-33625368)
chr2 (58-172)||(38435075-38435185)
chr2 (64-163)||(33287550-33287645)
chr2 (94-172)||(19336942-19337020)
chr2 (94-172)||(42149709-42149787)
chr2 (58-160)||(9556430-9556528)
chr2 (64-162)||(37470192-37470286)
chr2 (94-172)||(9496021-9496099)
chr2 (94-172)||(23915742-23915820)
chr2 (58-172)||(33504346-33504457)
chr2 (58-172)||(26670891-26671001)
chr2 (58-159)||(26784402-26784499)
chr2 (99-163)||(37452284-37452348)
chr2 (101-172)||(6219127-6219198)
chr2 (64-159)||(19235046-19235137)
chr2 (96-162)||(31254445-31254511)
chr2 (94-162)||(8197600-8197668)
chr2 (94-162)||(8202360-8202428)
chr2 (57-162)||(18959033-18959134)
chr2 (57-162)||(19855584-19855685)
chr2 (96-163)||(21834711-21834778)
chr2 (100-175)||(26850396-26850470)
chr2 (94-149)||(38860333-38860388)
chr2 (58-162)||(45543132-45543231)
chr2 (94-172)||(12882094-12882172)
chr2 (96-162)||(13240822-13240888)
chr2 (94-143)||(12443139-12443188)
chr2 (119-172)||(36366816-36366869)
chr2 (96-158)||(45077884-45077948)
chr2 (94-130)||(1626350-1626386)
chr2 (94-162)||(12141699-12141767)
chr2 (114-162)||(13474273-13474321)
chr2 (59-172)||(43751996-43752105)
chr2 (94-129)||(12026097-12026132)
chr2 (111-162)||(32402672-32402723)
chr2 (58-162)||(44437780-44437880)
chr2 (94-132)||(3305898-3305936)
chr2 (94-132)||(19024333-19024371)
chr2 (176-206)||(19629323-19629353)
chr2 (94-132)||(43832253-43832291)
chr2 (96-161)||(2377210-2377275)
chr2 (96-153)||(11412865-11412921)
chr2 (111-172)||(36616860-36616921)
chr2 (111-172)||(36650614-36650675)
chr2 (58-132)||(42543358-42543428)
chr2 (94-131)||(45640615-45640652)
chr2 (92-132)||(2906082-2906122)
chr2 (94-130)||(7431980-7432016)
chr2 (94-162)||(9578773-9578840)
chr2 (94-162)||(37481676-37481744)
[»] chr8 (49 HSPs)
chr8 (58-157)||(35643670-35643765)
chr8 (58-162)||(30198325-30198425)
chr8 (94-172)||(16035776-16035854)
chr8 (94-175)||(24399835-24399916)
chr8 (58-162)||(17491713-17491813)
chr8 (94-172)||(30559848-30559926)
chr8 (94-172)||(30783091-30783169)
chr8 (95-160)||(36069758-36069823)
chr8 (63-171)||(38391943-38392047)
chr8 (96-163)||(41971848-41971915)
chr8 (114-172)||(29520824-29520882)
chr8 (114-172)||(43904714-43904772)
chr8 (95-172)||(490491-490568)
chr8 (58-132)||(4011206-4011276)
chr8 (94-162)||(16705902-16705971)
chr8 (94-163)||(33827815-33827884)
chr8 (58-172)||(35914650-35914760)
chr8 (68-162)||(39967558-39967648)
chr8 (96-172)||(42584516-42584592)
chr8 (58-162)||(32931084-32931183)
chr8 (60-172)||(35362699-35362807)
chr8 (94-172)||(7615640-7615718)
chr8 (94-172)||(14459050-14459128)
chr8 (64-163)||(23023354-23023449)
chr8 (58-160)||(18737199-18737296)
chr8 (58-160)||(18742084-18742181)
chr8 (58-160)||(18747048-18747145)
chr8 (94-158)||(79182-79246)
chr8 (110-162)||(3638392-3638444)
chr8 (116-168)||(10824242-10824294)
chr8 (94-162)||(11733902-11733970)
chr8 (95-159)||(16917339-16917403)
chr8 (114-162)||(21425221-21425269)
chr8 (58-171)||(28169515-28169624)
chr8 (96-172)||(33076282-33076357)
chr8 (94-161)||(2216443-2216508)
chr8 (58-158)||(10079970-10080066)
chr8 (59-122)||(12692339-12692402)
chr8 (122-177)||(21121329-21121384)
chr8 (71-132)||(39388918-39388976)
chr8 (58-157)||(45512558-45512654)
chr8 (70-161)||(5908781-5908868)
chr8 (114-172)||(31715995-31716053)
chr8 (94-172)||(45041365-45041442)
chr8 (58-132)||(38178349-38178419)
chr8 (58-94)||(5127393-5127429)
chr8 (94-162)||(9904941-9905009)
chr8 (94-162)||(10108968-10109036)
chr8 (94-130)||(16351533-16351569)
[»] chr7 (44 HSPs)
chr7 (58-160)||(1569139-1569237)
chr7 (58-172)||(45601599-45601709)
chr7 (70-172)||(21517429-21517527)
chr7 (58-172)||(28627982-28628092)
chr7 (58-172)||(38135262-38135372)
chr7 (92-152)||(30664721-30664781)
chr7 (58-172)||(26741943-26742055)
chr7 (96-162)||(27893622-27893688)
chr7 (64-162)||(12966145-12966239)
chr7 (100-172)||(36101826-36101898)
chr7 (95-162)||(37976391-37976458)
chr7 (96-162)||(5418224-5418289)
chr7 (96-158)||(28542007-28542069)
chr7 (94-172)||(35922408-35922486)
chr7 (77-172)||(36239845-36239936)
chr7 (94-155)||(24549754-24549815)
chr7 (102-162)||(33731997-33732057)
chr7 (112-172)||(34341444-34341504)
chr7 (65-172)||(9210753-9210856)
chr7 (94-132)||(30144930-30144968)
chr7 (119-172)||(2882785-2882838)
chr7 (58-172)||(40979977-40980087)
chr7 (94-159)||(42187596-42187660)
chr7 (94-162)||(19262517-19262585)
chr7 (94-161)||(28562425-28562493)
chr7 (64-161)||(36136893-36136986)
chr7 (94-150)||(43281986-43282042)
chr7 (58-162)||(22174123-22174223)
chr7 (96-163)||(28858202-28858269)
chr7 (94-129)||(29653638-29653673)
chr7 (117-172)||(30814174-30814229)
chr7 (114-157)||(33103101-33103144)
chr7 (95-156)||(34926587-34926645)
chr7 (58-162)||(47848797-47848896)
chr7 (94-172)||(14057633-14057711)
chr7 (94-172)||(14367661-14367739)
chr7 (58-121)||(30814771-30814830)
chr7 (94-172)||(40138997-40139075)
chr7 (114-172)||(40391872-40391930)
chr7 (94-172)||(47796201-47796279)
chr7 (114-162)||(5577546-5577594)
chr7 (102-162)||(30200023-30200083)
chr7 (71-156)||(43282545-43282626)
chr7 (63-128)||(46973720-46973781)
[»] chr6 (19 HSPs)
chr6 (58-172)||(34554-34664)
chr6 (94-172)||(24665966-24666044)
chr6 (58-162)||(9593767-9593867)
chr6 (58-162)||(33997603-33997703)
chr6 (94-172)||(8364711-8364789)
chr6 (58-172)||(5095957-5096067)
chr6 (70-172)||(31818666-31818764)
chr6 (94-162)||(6293451-6293519)
chr6 (94-160)||(1748006-1748072)
chr6 (94-159)||(31831920-31831986)
chr6 (92-162)||(35199682-35199751)
chr6 (94-171)||(43102-43179)
chr6 (112-161)||(33080319-33080368)
chr6 (113-172)||(3210557-3210616)
chr6 (137-172)||(7513039-7513074)
chr6 (94-160)||(14389222-14389288)
chr6 (94-159)||(655456-655521)
chr6 (94-131)||(1681611-1681648)
chr6 (58-132)||(1747730-1747800)
[»] chr4 (61 HSPs)
chr4 (97-172)||(25574982-25575057)
chr4 (97-172)||(44384988-44385063)
chr4 (60-152)||(50680865-50680953)
chr4 (94-171)||(26024900-26024977)
chr4 (94-162)||(30621260-30621328)
chr4 (100-172)||(55007907-55007979)
chr4 (60-172)||(37488216-37488324)
chr4 (58-161)||(7681970-7682069)
chr4 (58-162)||(47147496-47147594)
chr4 (94-162)||(42639079-42639147)
chr4 (94-161)||(2557732-2557799)
chr4 (58-162)||(13805324-13805424)
chr4 (94-172)||(40420263-40420339)
chr4 (58-162)||(47372774-47372874)
chr4 (58-162)||(53540413-53540513)
chr4 (94-152)||(26024988-26025046)
chr4 (105-163)||(31339690-31339748)
chr4 (65-160)||(45204900-45204991)
chr4 (94-172)||(51421885-51421963)
chr4 (97-177)||(27049221-27049301)
chr4 (114-162)||(34208328-34208376)
chr4 (94-162)||(37042723-37042791)
chr4 (58-162)||(20105577-20105677)
chr4 (94-157)||(31043227-31043290)
chr4 (115-162)||(34379579-34379626)
chr4 (99-162)||(41192221-41192284)
chr4 (62-162)||(50662515-50662611)
chr4 (94-161)||(56439631-56439698)
chr4 (94-132)||(29182607-29182645)
chr4 (111-172)||(5306468-5306529)
chr4 (70-132)||(10209171-10209229)
chr4 (119-172)||(29398984-29399037)
chr4 (58-132)||(31961355-31961425)
chr4 (58-132)||(45569098-45569168)
chr4 (99-172)||(55388260-55388333)
chr4 (94-162)||(934490-934558)
chr4 (98-162)||(6843774-6843838)
chr4 (94-142)||(7544602-7544650)
chr4 (94-158)||(21945701-21945765)
chr4 (94-162)||(26037564-26037632)
chr4 (58-159)||(34233086-34233183)
chr4 (58-171)||(49987531-49987640)
chr4 (96-172)||(53518372-53518448)
chr4 (116-172)||(55300582-55300638)
chr4 (70-162)||(8599000-8599088)
chr4 (70-162)||(21107127-21107215)
chr4 (101-152)||(44047440-44047491)
chr4 (117-172)||(51438623-51438678)
chr4 (96-162)||(31403093-31403159)
chr4 (96-162)||(31459151-31459217)
chr4 (96-162)||(32339716-32339782)
chr4 (94-160)||(42293326-42293392)
chr4 (94-172)||(50967077-50967154)
chr4 (77-163)||(21214644-21214726)
chr4 (93-162)||(22420776-22420844)
chr4 (58-132)||(31897517-31897587)
chr4 (94-162)||(33710079-33710150)
chr4 (58-132)||(46372147-46372217)
chr4 (94-162)||(2589227-2589295)
chr4 (114-162)||(26510563-26510611)
chr4 (96-160)||(40018250-40018314)
[»] chr1 (48 HSPs)
chr1 (70-162)||(40416506-40416594)
chr1 (97-172)||(43375647-43375722)
chr1 (94-172)||(52532665-52532743)
chr1 (64-162)||(3818915-3819009)
chr1 (94-171)||(8796364-8796441)
chr1 (94-161)||(990518-990585)
chr1 (58-158)||(6025728-6025824)
chr1 (58-162)||(38869005-38869105)
chr1 (96-163)||(13827638-13827707)
chr1 (94-172)||(27520256-27520334)
chr1 (96-162)||(29577202-29577267)
chr1 (94-172)||(41560384-41560462)
chr1 (58-172)||(9599443-9599553)
chr1 (92-161)||(10569131-10569200)
chr1 (58-160)||(42501231-42501329)
chr1 (94-171)||(51812664-51812741)
chr1 (94-162)||(39515927-39515995)
chr1 (105-172)||(5338879-5338946)
chr1 (114-172)||(6084150-6084208)
chr1 (64-163)||(8342939-8343034)
chr1 (94-132)||(12135862-12135900)
chr1 (71-162)||(29128919-29129006)
chr1 (70-132)||(8203223-8203281)
chr1 (70-132)||(19969301-19969359)
chr1 (115-172)||(25715375-25715432)
chr1 (58-132)||(30834066-30834136)
chr1 (58-172)||(36339853-36339962)
chr1 (116-157)||(39776959-39777000)
chr1 (71-172)||(7762486-7762583)
chr1 (116-172)||(28511850-28511906)
chr1 (114-162)||(52900701-52900749)
chr1 (101-172)||(27072536-27072607)
chr1 (111-162)||(40920588-40920639)
chr1 (96-163)||(50636238-50636305)
chr1 (58-96)||(5338847-5338885)
chr1 (94-144)||(8676942-8676992)
chr1 (94-172)||(12930360-12930438)
chr1 (96-162)||(17233830-17233896)
chr1 (94-132)||(28528510-28528548)
chr1 (114-172)||(34444531-34444589)
chr1 (94-172)||(39140670-39140748)
chr1 (94-159)||(1661574-1661639)
chr1 (103-172)||(31274450-31274519)
chr1 (58-172)||(32404575-32404685)
chr1 (122-162)||(2544776-2544816)
chr1 (96-132)||(10584986-10585022)
chr1 (114-162)||(11941639-11941687)
chr1 (114-162)||(14557743-14557791)
[»] chr5 (33 HSPs)
chr5 (58-162)||(9235172-9235270)
chr5 (70-163)||(30588582-30588671)
chr5 (58-162)||(12576919-12577019)
chr5 (94-172)||(7359310-7359387)
chr5 (94-172)||(14667926-14668004)
chr5 (94-172)||(43475394-43475472)
chr5 (60-162)||(14749432-14749530)
chr5 (62-162)||(11675656-11675753)
chr5 (59-171)||(6889117-6889225)
chr5 (94-172)||(7678633-7678710)
chr5 (111-172)||(20367065-20367126)
chr5 (97-172)||(418083-418158)
chr5 (116-163)||(43557891-43557938)
chr5 (94-163)||(23980099-23980168)
chr5 (94-163)||(35615438-35615507)
chr5 (97-161)||(17340496-17340560)
chr5 (94-162)||(38684635-38684703)
chr5 (94-162)||(43035136-43035204)
chr5 (58-162)||(6859504-6859604)
chr5 (64-172)||(29922413-29922517)
chr5 (94-171)||(38341479-38341552)
chr5 (137-172)||(42504296-42504331)
chr5 (117-163)||(15252802-15252848)
chr5 (64-163)||(27998570-27998665)
chr5 (94-132)||(28186864-28186902)
chr5 (70-132)||(2713079-2713137)
chr5 (58-132)||(18698917-18698987)
chr5 (96-129)||(28005692-28005725)
chr5 (96-149)||(39322138-39322191)
chr5 (65-162)||(28012-28105)
chr5 (92-132)||(2066150-2066190)
chr5 (92-132)||(4460360-4460400)
chr5 (67-132)||(15369886-15369947)
[»] chr3 (45 HSPs)
chr3 (96-172)||(36304123-36304199)
chr3 (96-162)||(19758044-19758110)
chr3 (58-172)||(39600730-39600840)
chr3 (70-159)||(40116530-40116615)
chr3 (94-162)||(49841771-49841839)
chr3 (93-172)||(29475840-29475919)
chr3 (94-161)||(45289151-45289218)
chr3 (96-162)||(19737141-19737207)
chr3 (94-172)||(23534619-23534697)
chr3 (114-172)||(40116387-40116445)
chr3 (99-172)||(29601052-29601125)
chr3 (58-172)||(54365024-54365134)
chr3 (102-162)||(55244441-55244501)
chr3 (94-162)||(37598229-37598297)
chr3 (117-172)||(40991609-40991664)
chr3 (96-155)||(44571584-44571643)
chr3 (72-131)||(36820067-36820122)
chr3 (58-162)||(54128501-54128602)
chr3 (137-209)||(51027756-51027835)
chr3 (120-172)||(40106669-40106721)
chr3 (96-132)||(41452829-41452865)
chr3 (96-172)||(41842572-41842648)
chr3 (94-158)||(43308717-43308781)
chr3 (70-162)||(45486908-45486999)
chr3 (57-162)||(45493751-45493852)
chr3 (94-129)||(33700338-33700373)
chr3 (137-172)||(39208806-39208841)
chr3 (96-151)||(48657398-48657453)
chr3 (94-172)||(49042091-49042170)
chr3 (94-128)||(2340810-2340844)
chr3 (58-172)||(33755393-33755501)
chr3 (114-160)||(38431023-38431069)
chr3 (96-162)||(39235295-39235361)
chr3 (77-132)||(46431768-46431819)
chr3 (94-172)||(50960686-50960764)
chr3 (139-172)||(2195273-2195306)
chr3 (94-159)||(37534264-37534329)
chr3 (114-163)||(37779052-37779101)
chr3 (58-172)||(41482186-41482298)
chr3 (58-172)||(42510065-42510175)
chr3 (94-162)||(19676140-19676208)
chr3 (58-94)||(31261065-31261101)
chr3 (112-172)||(32170578-32170638)
chr3 (94-162)||(42026595-42026663)
chr3 (96-160)||(50237695-50237759)
[»] scaffold0015 (1 HSPs)
scaffold0015 (58-172)||(66660-66771)
[»] scaffold0010 (1 HSPs)
scaffold0010 (94-172)||(160373-160451)
[»] scaffold0491 (1 HSPs)
scaffold0491 (58-160)||(3889-3986)
[»] scaffold0050 (1 HSPs)
scaffold0050 (58-172)||(58275-58385)
[»] scaffold0018 (1 HSPs)
scaffold0018 (70-132)||(178509-178567)
[»] scaffold0373 (1 HSPs)
scaffold0373 (98-162)||(2360-2424)
[»] scaffold1858 (1 HSPs)
scaffold1858 (120-176)||(920-976)


Alignment Details
Target: chr2 (Bit Score: 160; Significance: 3e-85; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 51 - 234
Target Start/End: Complemental strand, 33625368 - 33625185
Alignment:
Q  51 ggagcacagaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatga 150  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33625368 ggagcactgaggcagaggtagacctagaaaaactgtaagagaaagaaactattaagaaatatctagagattaatgagttggaaagtaatatggtttatga 33625269  T
Q  151 tagaacattatgaagtaatttgttcatttagtgggataagactttgttgttattgttgtatgtgtcatcgtgcttgtgtttgtg 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  33625268 tagaacattatgaagtaatttgttcatttagtgggataagactttgctgttattgttgtatgtgtcatcgtgcttgtgcttgtg 33625185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 38435075 - 38435185
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    |||||||||||||||||| ||||||||| |||||||    |||||||||||| ||||||||||||||| |||||| || ||| ||||||||||| |||||    
T  38435075 agaggcagaggtagacctagaaaaactacaagagaa----actattaagaaagatctagagattaatgtgttggatcgaaatttggtttatgattgaaca 38435170  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  38435171 ttatggcgtaatttg 38435185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 33287550 - 33287645
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||| |||||| |||||||||||||||||    |||||||||||| ||||||| ||||||||||| || || |||||||||||||||||||||||||||    
T  33287550 agaggaagacctagaaaaactataagagaa----actattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatga 33287645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 19337020 - 19336942
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||| |||||| || ||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||||    
T  19337020 agaaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttg 19336942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 42149787 - 42149709
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| |||||||||||| |||| ||||  | ||||||||||||||||||||||||||  ||||||||    
T  42149787 agaaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaacattatggcgtaatttg 42149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 9556528 - 9556430
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||| ||| |||||| |||||||||||||| |||    ||||||||||| |||||| ||||||||||||||| |   ||||||||||||||||||||    
T  9556528 agaggcaaaggaagaccttgaaaaactataagataaa----ctattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatagaaca 9556433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 37470286 - 37470192
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||| ||||||| |||||||||||||||||    |||||| || | |||||||||||||||||||||| || |||||||  |||||||||||||||||    
T  37470286 agaggaagacctgaaaaaactataagagaaa----ctattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatg 37470192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 9496021 - 9496099
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||| ||||| || ||||| ||||||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  9496021 agaaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttg 9496099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 23915820 - 23915742
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| ||||||||||||||||| ||||  | | ||||||||||||||||||| ||||  ||||||||    
T  23915820 agaaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaatttg 23915742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 33504346 - 33504457
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagatt-aatgagttggaacgtaatatggtttatgatagaac 156  Q
    ||||||||||  | |||| ||||||||||||||||||    ||||||||||| ||||||||||| ||| |||||||  | |||||||| |||||||||||    
T  33504346 agaggcagagaaaaacctagaaaaactataagagaaa----ctattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaac 33504441  T
Q  157 attatgaagtaatttg 172  Q
    ||||||  ||||||||    
T  33504442 attatggcgtaatttg 33504457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 26670891 - 26671001
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| ||||||  |||||||||||    ||||||||||||||||| || ||||||||||||||||||| |  |||||| |||||||||||| |    
T  26670891 agaggtagaggaagacctacaaaaactataa----aagaaactattaagaaagatttagagattaatgagttggaccaaaatatgatttatgatagaata 26670986  T
Q  158 ttatgaagtaatttg 172  Q
    | |||  ||||||||    
T  26670987 taatggtgtaatttg 26671001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 26784499 - 26784402
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||  |||||| ||||||||||||||||||    ||||||||||| || ||||||||||||||||| |  | |||||||| ||||||| ||||    
T  26784499 agaggcagagaaagacctagaaaaactataagagaaa----ctattaagaaagatatagagattaatgagttgaatagaaatatggtatatgataaaaca 26784404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 37452348 - 37452284
Alignment:
Q  99 ctattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||||||||| |  |||||||||||||||||||  | |||||||||||||||||||||||||||    
T  37452348 ctattaagaaagaattagagattaatgagttggacagaaatatggtttatgatagaacattatga 37452284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 6219127 - 6219198
Alignment:
Q  101 attaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||| |||| || ||||||||| ||||||||| || ||||||||||||||||||||||||||  ||||||||    
T  6219127 attaggaaagatttagagattagtgagttggaccgaaatatggtttatgatagaacattatggtgtaatttg 6219198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 19235137 - 19235046
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    ||||| |||||| ||||||||||||||||||    ||||| ||||| |||||||||||||||| |||||  | |||||||| | ||||||||||||    
T  19235137 agaggaagacctagaaaaactataagagaaa----ctattgagaaagatctagagattaatgatttggatagaaatatggtatttgatagaacatt 19235046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31254445 - 31254511
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| |||||||||||||||||||| |  | |||||| ||||||| |||||||||||    
T  31254445 aaactattaagaaagatctagagattaatgagttgaatagaaatatgatttatgacagaacattatg 31254511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 8197668 - 8197600
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| ||||| ||||||||||||||||  | |||||| | |||||||||| ||||||    
T  8197668 agaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatg 8197600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 8202428 - 8202360
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| ||||| ||||||||||||||||  | |||||| | |||||||||| ||||||    
T  8202428 agaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatg 8202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 18959033 - 18959134
Alignment:
Q  57 cagaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaac 156  Q
    |||||||||||| |||||| ||||||||| ||||||||    |||| | |||| |  | ||||||||||||||||| |  |||||||| |||||||||||    
T  18959033 cagaggcagaggaagacctagaaaaactacaagagaaa----ctataaggaaagacttggagattaatgagttggatcaaaatatggtctatgatagaac 18959128  T
Q  157 attatg 162  Q
    ||||||    
T  18959129 attatg 18959134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 19855584 - 19855685
Alignment:
Q  57 cagaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaac 156  Q
    |||||||||||| |||||| || |||||||||    ||||||||||||||||| ||| |||| |||||||| ||||  | || ||||| ||||||||| |    
T  19855584 cagaggcagaggaagacctagataaactataa----aagaaactattaagaaagatccagaggttaatgagctggatagaaacatggtatatgatagagc 19855679  T
Q  157 attatg 162  Q
    ||||||    
T  19855680 attatg 19855685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 21834711 - 21834778
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||||||| ||||||| || |||||||||||||||| |  ||| ||||||||||||||||| |||||    
T  21834711 aaactattaggaaatatttatagattaatgagttggatctaaatttggtttatgatagaacaatatga 21834778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 26850396 - 26850470
Alignment:
Q  100 tattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttgttc 175  Q
    |||||||| |||| |||| ||| |||||||||| || |||||||||||||||| |||||||||  |||||||||||    
T  26850396 tattaagatatatttagaaatttatgagttgga-cgaaatatggtttatgataaaacattatggcgtaatttgttc 26850470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 38860333 - 38860388
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatg 149  Q
    |||||||||||||||| ||||||||||| |||||||| | || |||||||||||||    
T  38860333 agaaactattaagaaagatctagagattcatgagttgtatcgcaatatggtttatg 38860388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 45543231 - 45543132
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||||||||||||||||||||||    ||||||  ||| || ||||| | |||||||| || |  |||||||||||||||||||||    
T  45543231 agaggtagaggaagacctggaaaaactataagagaaa----ctattagaaaagatttagaggt-aatgagttcgatccaaatatggtttatgatagaaca 45543137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 12882172 - 12882094
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||| || ||||||| ||||| ||||||||||||| |  |||||||||| |||||||||||| ||  ||||||||    
T  12882172 agaaactactaggaaatatttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttg 12882094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 13240888 - 13240822
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| ||||||||||||| |||||| | || ||| |||||||||||| | |||||||    
T  13240888 aaactattaagaaagatctagagattaacgagttgaatcgaaatttggtttatgataaaccattatg 13240822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 12443139 - 12443188
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatgg 143  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||    
T  12443139 agaaactattaagatatatttagagattaatgagttggatcgaaatatgg 12443188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 36366816 - 36366869
Alignment:
Q  119 attaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||| || |||||||||||| |||||||||||||  ||||||||    
T  36366816 attaatgagttggaccgaaatatggtttataatagaacattatggtgtaatttg 36366869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 45077884 - 45077948
Alignment:
Q  96 aaactattaagaaatatctagagattaat--gagttggaacgtaatatggtttatgatagaacat 158  Q
    |||||||||||||| || |||||||||||  |||||||| || ||||| ||||||||||||||||    
T  45077884 aaactattaagaaagatttagagattaatgagagttggatcgaaatatagtttatgatagaacat 45077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 1626350 - 1626386
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttg 130  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1626350 agaaactattaagaaagatctagagattaatgagttg 1626386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 12141699 - 12141767
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| |||| |  ||||||||||||| ||||| |  |||||||| |||||||||||||||||    
T  12141699 agaaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattatg 12141767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 13474321 - 13474273
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||||| || ||||||||||||||||  ||||||||    
T  13474321 tagagattaatgagttggatcggaatatggtttatgataatacattatg 13474273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 43752105 - 43751996
Alignment:
Q  59 gaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacat 158  Q
    |||||| ||| |||||| |||||||||| |||||||    |||||| |||| || | || |||||||||||||| || || ||||| ||||||||||||     
T  43752105 gaggcataggaagacctagaaaaactatcagagaaa----ctattaggaaagatttggaaattaatgagttggaccgaaagatggtgtatgatagaacac 43752010  T
Q  159 tatgaagtaatttg 172  Q
    ||||  ||||||||    
T  43752009 tatgttgtaatttg 43751996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 12026132 - 12026097
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagtt 129  Q
    |||||||||||||||| |||||||||||||||||||    
T  12026132 agaaactattaagaaagatctagagattaatgagtt 12026097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 32402672 - 32402723
Alignment:
Q  111 atctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||||||||  | |||| ||| |||||||||||||||||    
T  32402672 atctagagattaatgagttggatagaaataaggtatatgatagaacattatg 32402723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 44437880 - 44437780
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| || ||||||||| ||||||||||| ||||||    ||||||||||  |||||||||| |||||||||||    || ||||||| ||||||||||    
T  44437880 agaggtaggggtagacctagaaaaactatatgagaaa----ctattaagaaggatctagagataaatgagttggagaaaaacatggtttttgatagaaca 44437785  T
Q  158 ttatg 162  Q
     ||||    
T  44437784 ctatg 44437780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 3305936 - 3305898
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  3305936 agaaactataaagaaatatctagagattaacgagttgga 3305898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 19024333 - 19024371
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  19024333 agaaactattaagaaagatctaaagattaatgagttgga 19024371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 19629323 - 19629353
Alignment:
Q  176 atttagtgggataagactttgttgttattgt 206  Q
    |||||||||||||||||||||||||||||||    
T  19629323 atttagtgggataagactttgttgttattgt 19629353  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 43832253 - 43832291
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  43832253 agaaactattaagaaggatctagagattaatgagttgga 43832291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 2377210 - 2377275
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||||||| ||| || |||||| |||||||||||| |  | |||||| ||||||||||||||||    
T  2377210 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 2377275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 11412865 - 11412921
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatag 153  Q
    ||||||||| |||| || ||||||||||||||||||| |  |||||||||||||||||    
T  11412865 aaactattaggaaagat-tagagattaatgagttggatccaaatatggtttatgatag 11412921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 36616860 - 36616921
Alignment:
Q  111 atctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| || |  ||||| ||||||||||||||| ||| | ||||||||    
T  36616860 atctagagattaatgagttagatcaaaatatagtttatgatagaacactataatgtaatttg 36616921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 36650614 - 36650675
Alignment:
Q  111 atctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| || |  ||||| ||||||||||||||| ||| | ||||||||    
T  36650614 atctagagattaatgagttagatcaaaatatagtttatgatagaacactataacgtaatttg 36650675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 42543358 - 42543428
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| || ||||||||| |||||||||||||    ||||||||||| |||  |||||||||| |||||||||||    
T  42543358 agaggtaggggtagacctagaaaaactataag----agaaactattaggaaggatctagagataaatgagttgga 42543428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 45640652 - 45640615
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgg 131  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  45640652 agaaactattaagaaagatctagagattaataagttgg 45640615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 2906122 - 2906082
Alignment:
Q  92 aaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||||| || ||||||| |||||||||||    
T  2906122 aaagaaactattaagaaaaatgtagagatcaatgagttgga 2906082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 7432016 - 7431980
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttg 130  Q
    |||||||||||||||  ||||||||||||||||||||    
T  7432016 agaaactattaagaaggatctagagattaatgagttg 7431980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 9578840 - 9578773
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| |||| || || | |||||||||||||| | ||||||||||||| |||||| ||||||    
T  9578840 agaaactatta-gaaaaatttacaaattaatgagttggatcctaatatggtttattatagaatattatg 9578773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 37481744 - 37481676
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| |||||| ||| |||||||||||    |||||||| | |||||||| ||||||    
T  37481744 agaaactattaagaaagatctagcgataaatgagttggataaaaatatggtatttgatagaaaattatg 37481676  T

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Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 35643765 - 35643670
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| ||||||||||||||||||     |||||||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  35643765 agaggcagaggaagacctagaaaaactataagagaaat----tattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaaca 35643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 30198425 - 30198325
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    |||||||||||||||| | ||||||||||||||||||     |||||||||| || | ||||||||||||||||| || ||||||||||||||||||| |    
T  30198425 agaggcagaggtagacttagaaaaactataagagaaat----tattaagaaagatattgagattaatgagttggatcggaatatggtttatgatagaata 30198330  T
Q  158 ttatg 162  Q
    |||||    
T  30198329 ttatg 30198325  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 16035854 - 16035776
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||| ||||||||||||||||||||| | ||||||| || ||||||||||||| ||||||||||||| ||||||||    
T  16035854 agaaactgttaagaaatatctagagattacttagttggatcgaaatatggtttatggtagaacattatgacgtaatttg 16035776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 24399916 - 24399835
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttgttc 175  Q
    |||||||||||||||  |||| |||||||||||||||||  | ||||||||||||||||||| ||||||| || ||||||||    
T  24399916 agaaactattaagaaggatctcgagattaatgagttggattgaaatatggtttatgatagaatattatgatgtcatttgttc 24399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 17491813 - 17491713
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||| ||| |||||| |||||||| |||||||||    ||||||||||| |  | ||||||||||||||||| |  |||||||||||||||||||||    
T  17491813 agaggcacaggaagacctagaaaaactgtaagagaaa----ctattaagaaagacttggagattaatgagttggaccaaaatatggtttatgatagaaca 17491718  T
Q  158 ttatg 162  Q
    |||||    
T  17491717 ttatg 17491713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 30559848 - 30559926
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||| | |||| || ||||||||||||||||||| |   |||||||||||||||||||||||||| ||||||||    
T  30559848 agaaactatcaggaaagatttagagattaatgagttggatccatatatggtttatgatagaacattatgacgtaatttg 30559926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 30783169 - 30783091
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||| ||||| |||||||||||||||||||||| || |||| ||||||| ||| |||||||||| ||| ||||    
T  30783169 agaaactatttagaaagatctagagattaatgagttggatcgaaatacggtttataataaaacattatgaggtagtttg 30783091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 36069758 - 36069823
Alignment:
Q  95 gaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    ||||||||||| |||||| ||||||||||||||||||   | ||||||||||||||||||||||||    
T  36069758 gaaactattaacaaatatttagagattaatgagttgggtagaaatatggtttatgatagaacatta 36069823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 38392047 - 38391943
Alignment:
Q  63 cagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||| |||||| ||||||||||| ||||||    | ||||||||| ||||| |||||||||||| ||| || |||||||| |||||||||| ||||||    
T  38392047 cagaggaagacctagaaaaactatatgagaaa----ccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatg 38391952  T
Q  163 aagtaattt 171  Q
      |||||||    
T  38391951 gcgtaattt 38391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 41971915 - 41971848
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||| ||||||| || |||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  41971915 aaactactaagaaagatttagagattaatgagttggactgaaatattgtttatgatagaacattatga 41971848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 29520824 - 29520882
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  29520824 tagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttg 29520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 43904772 - 43904714
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  43904772 tagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttg 43904714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 490491 - 490568
Alignment:
Q  95 gaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||| | |||| || |||||||| |||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  490491 gaaactataaggaaagatttagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttg 490568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 4011206 - 4011276
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||| |||||| |||||| |||||||||||||||||    |||||||||||| ||||| ||||||||||||||||    
T  4011206 agagacagaggaagacctagaaaaactataagagaa----actattaagaaagatctaaagattaatgagttgga 4011276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 16705902 - 16705971
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttat-gatagaacattatg 162  Q
    |||||||||||||||| | |||||||||||||||||||| || |||||||| ||| ||| ||||||||||    
T  16705902 agaaactattaagaaaaagctagagattaatgagttggatcgaaatatggtatatggatggaacattatg 16705971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 33827884 - 33827815
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||||| |||||| || |||||||||| ||||| |  ||||||||||||||||||||| |||||    
T  33827884 agaaactattaaaaaatatttatagattaatgaattggatctaaatatggtttatgatagaacaatatga 33827815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 35914760 - 35914650
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    |||| |||||| |||| | ||||||||||||||||||    |||||| |||| |  |  |||||||||||||||| |  |||||||||||||||||||||    
T  35914760 agagacagaggaagacatagaaaaactataagagaaa----ctattaggaaagacttgaagattaatgagttggaccaaaatatggtttatgatagaaca 35914665  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  35914664 ttatggcgtaatttg 35914650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 39967648 - 39967558
Alignment:
Q  68 gtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||| ||| ||||||||||||||||||    ||||||||||| |||||| |||||||||||||||  |  |||| ||||||| ||||||||||||    
T  39967648 gtaggcctagaaaaactataagagaaa----ctattaagaaagatctagcgattaatgagttggattgagatatagtttatgttagaacattatg 39967558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 42584516 - 42584592
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||| | |||| ||||| || ||||||| ||||| |  ||||||||||||||||||||||||||| ||||||||    
T  42584516 aaactataaggaaagatctataggttaatgatttggatccaaatatggtttatgatagaacattatgacgtaatttg 42584592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 32931084 - 32931183
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| ||||||  ||||||||| |||||||    |||||| |||| || | || |||||||||||||| || |||||||| ||||||||||||    
T  32931084 agaggcagaggaagacctaaaaaaactatcagagaaa----ctattaggaaagattttgaaattaatgagttgga-cgaaatatggtgtatgatagaaca 32931178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 35362807 - 35362699
Alignment:
Q  60 aggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    ||||||||| |||||| ||||||||||  ||||||    |||||| |||| || | || ||||||||||||||  | |||||||| ||||||||||||||    
T  35362807 aggcagaggaagacctagaaaaactatcggagaaa----ctattaggaaagatttggaaattaatgagttggactgaaatatggtgtatgatagaacatt 35362712  T
Q  160 atgaagtaatttg 172  Q
    |||  ||||||||    
T  35362711 atggcgtaatttg 35362699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 7615718 - 7615640
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||| |||||||||| || || | |||||||||||||| || ||||| |||||||||| || ||||||| ||||||||    
T  7615718 agaaaatattaagaaaaatttaaaaattaatgagttggatcgaaatatagtttatgataaaatattatgatgtaatttg 7615640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 14459050 - 14459128
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || | |||||||||||||| || |  ||||||||||||||| ||||||||||  ||||||||    
T  14459050 agaaactattaggaaagatttggagattaatgagttagaccaaaatatggtttatgatggaacattatggtgtaatttg 14459128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 23023354 - 23023449
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||| |||||| ||||||||||||||||||    ||| ||||||| ||||| ||||||||||||||||  | || ||| | |||||||||| |||||||    
T  23023354 agaggaagacctagaaaaactataagagaaa----ctactaagaaagatctacagattaatgagttggataggaacatgatatatgatagaatattatga 23023449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 18737296 - 18737199
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||||||||||  |||||||||||||||||    ||||| ||||| |||   ||||||||||||||||    ||||||||||||||| |||||    
T  18737296 agaggcagaggtagaccta-aaaaactataagagaaa----ctatttagaaaaatcattagattaatgagttggattaaaatatggtttatgatcgaaca 18737202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 18742181 - 18742084
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||||||||||  |||||||||||||||||    ||||| ||||| |||   ||||||||||||||||    ||||||||||||||| |||||    
T  18742181 agaggcagaggtagaccta-aaaaactataagagaaa----ctatttagaaaaatcattagattaatgagttggattaaaatatggtttatgattgaaca 18742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 18747145 - 18747048
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||||||||||  |||||||||||||||||    ||||| ||||| |||   ||||||||||||||||    ||||||||||||||| |||||    
T  18747145 agaggcagaggtagaccta-aaaaactataagagaaa----ctatttagaaaaatcattagattaatgagttggattaaaatatggtttatgattgaaca 18747051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 79182 - 79246
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacat 158  Q
    |||||||||||||||| ||||||||||||||||| ||||  | |||||||  | |||||||||||    
T  79182 agaaactattaagaaagatctagagattaatgagctggatagaaatatggcctgtgatagaacat 79246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 3638444 - 3638392
Alignment:
Q  110 tatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||||||||||  | ||||| || |||||||||||||||||    
T  3638444 tatctagagattaatgagttggacagaaatatagtatatgatagaacattatg 3638392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 10824294 - 10824242
Alignment:
Q  116 gagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaa 168  Q
    ||||||||||| ||||| |  |||||||||| |||||||||||||||||||||    
T  10824294 gagattaatgaattggaccaaaatatggtttttgatagaacattatgaagtaa 10824242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 11733902 - 11733970
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| |||||| ||||||||||||||||||| ||  | |||||||| | ||||||| |||||||    
T  11733902 agaaactataaagaaaaatctagagattaatgagttagatagaaatatggtatgtgatagagcattatg 11733970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 16917339 - 16917403
Alignment:
Q  95 gaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    |||||||| ||| || || |||||||||||||||||||  | |||||||| ||||||||||||||    
T  16917339 gaaactatcaaggaagatttagagattaatgagttggatagaaatatggtatatgatagaacatt 16917403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 21425221 - 21425269
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||||| || |||||| ||||||||||| |||||||    
T  21425221 tagagattaatgagttggatcgaaatatgatttatgatagaccattatg 21425269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 28169515 - 28169624
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| ||||||  ||||||||||||||||    ||||||| |||| || | |||||||||||||||||    |||||||||||||||| || |    
T  28169515 agaggtagaggaagacctaaaaaaactataagagaa----actattaggaaagattttgagattaatgagttggattcaaatatggtttatgataaaata 28169610  T
Q  158 ttatgaagtaattt 171  Q
    |||||  |||||||    
T  28169611 ttatggtgtaattt 28169624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 33076282 - 33076357
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||| ||| || ||||||||||||||||| | |  |||||||||||| |||||| ||||||| ||||||||    
T  33076282 aaactattaa-aaagatttagagattaatgagttgtaccaaaatatggtttataatagaatattatgatgtaatttg 33076357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 2216443 - 2216508
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||||||||||||  || ||||||| ||||||||||| | ||||||| ||||||||||||||||||    
T  2216443 agaaactattaagaag-atttagagatcaatgagttggatcctaatatg-tttatgatagaacattat 2216508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 10080066 - 10079970
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| || ||||||||||| |||    || |||||||| ||||||||||||||||||||||  | |||||| | | ||||||||||    
T  10080066 agaggtagaggaagacctagagaaactataagaaaaa----ctgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatagaaca 10079971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 12692402 - 12692339
Alignment:
Q  59 gaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagatta 122  Q
    |||||||||| ||| || |||||||| |||||||||  ||||||||||||| | ||||||||||    
T  12692402 gaggcagaggaagagctagaaaaactgtaagagaaactaactattaagaaagacctagagatta 12692339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 21121329 - 21121384
Alignment:
Q  122 aatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttgttcat 177  Q
    ||||||||||| | |||||||||||||||||||||| ||||  |||||||| ||||    
T  21121329 aatgagttggatcctaatatggtttatgatagaacactatggcgtaatttgatcat 21121384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 39388918 - 39388976
Alignment:
Q  71 gacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| ||||||||||||   | ||||||||||| |||| ||||||||||||||||||||||    
T  39388918 gacctagaaaaactataa---agagaaactattaggaaagatctagagattaatgagttgga 39388976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 45512654 - 45512558
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga-acgtaatatggtttatgatagaac 156  Q
    ||||||||||| |||||| ||||||||||||||||||    |||||| |||| |  | |||||||||||||| ||  |  ||||||||||||||||||||    
T  45512654 agaggcagaggaagacctagaaaaactataagagaaa----ctattaggaaagacttggagattaatgagttcgatccaaaatatggtttatgatagaac 45512559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 5908781 - 5908868
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||| |||||||||||||||||    |||||||| ||| ||| |  ||||||||||||||| |  |||||| ||||||||||||| ||||    
T  5908781 agacctagaaaaactataagagaa----actattaaaaaagatccaaggattaatgagttggatcaaaatatgatttatgatagaaccttat 5908868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 31715995 - 31716053
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| ||||||| |  ||||||||||| ||||||||||||||  ||||||||    
T  31715995 tagagattaattagttggatccaaatatggtttaagatagaacattatggcgtaatttg 31716053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 45041442 - 45041365
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || ||||| ||||||||||||| |  |||||||||||||||||  |||||||  ||||||||    
T  45041442 agaaactattaggaaagatttagaggttaatgagttggatc-caatatggtttatgatagcgcattatggcgtaatttg 45041365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 38178419 - 38178349
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| ||||| |||||| ||||||||||||||    ||||||||||| ||| | ||||| ||||||||||||||    
T  38178419 agaggtagaggaagacctagaaaaactataaga----gaaactattaacaaagacctagacattaatgagttgga 38178349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 5127429 - 5127393
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaa 94  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  5127429 agaggcagaggtaggcctagaaaaactataagagaaa 5127393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 9905009 - 9904941
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||| ||| || |||| |||||||| ||||| |  |||| ||||||||||| |||||||||    
T  9905009 agaaactattaataaagatttagaaattaatgatttggatcaaaataaggtttatgataaaacattatg 9904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 10108968 - 10109036
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||| ||||||| ||||||||||||| ||||| ||  |  ||||| | |||||||||||||||||    
T  10108968 agaaactaataagaaagatctagagattaacgagtttgatagagatatgttatatgatagaacattatg 10109036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 16351533 - 16351569
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttg 130  Q
    |||||||||||||||  ||||||||||||||||||||    
T  16351533 agaaactattaagaaggatctagagattaatgagttg 16351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 1569139 - 1569237
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    |||||||||||||| ||| ||||||||||||||| ||    ||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||    
T  1569139 agaggcagaggtagtcctagaaaaactataagagtaa----ctattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaaca 1569234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 45601599 - 45601709
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| ||||||||||||||||||    | ||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||    
T  45601599 agaggtagaggaagacctagaaaaactataagagaaa----ccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaaca 45601694  T
Q  158 ttatgaagtaatttg 172  Q
     ||||  ||||||||    
T  45601695 ctatggtgtaatttg 45601709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 21517527 - 21517429
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaat 169  Q
    |||||| ||||||||||||||||||    ||||||| |||||| ||||||||||| ||||||| |  |||||| ||||||||| |||||||||| |||||    
T  21517527 agacctagaaaaactataagagaaa----ctattaaaaaatatttagagattaataagttggatccaaatatgatttatgatataacattatgacgtaat 21517432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 28628092 - 28627982
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| ||||||||||||||||||    |||||| |||| || |||||||||||||||||||    ||| |||||||||||||||||    
T  28628092 agaggtagaggaagacctagaaaaactataagagaaa----ctattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaaca 28627997  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  28627996 ttatggcgtaatttg 28627982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 38135372 - 38135262
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||| | |||||| |||||| |||||||||||    ||||||| ||| || ||||||||||||||||||| || ||||||| ||||||||||| |    
T  38135372 agaggcagatgaagacctagaaaaagtataagagaaa----ctattaaaaaagatttagagattaatgagttggaccgaaatatgggttatgatagaata 38135277  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  38135276 ttatggcgtaatttg 38135262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 30664721 - 30664781
Alignment:
Q  92 aaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgata 152  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||    
T  30664721 aaagaaactattaagaaagatctagagattaatgagttggatcataacatggtttatgata 30664781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 26742055 - 26741943
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||| | |||||||||| | ||| |  |||||||| ||||||| | || || ||||||||||| || |||||||||||||||||||||    
T  26742055 agaggcagaggaagacgtagaaaaactatcaaagata--aactattaggaaatatttggaaataaatgagttggaccgaaatatggtttatgatagaaca 26741958  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  26741957 ttatggcgtaatttg 26741943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 27893688 - 27893622
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| || |||||||||||||| |||| || |||||| |||||||||||||||||||    
T  27893688 aaactattaagaaagatttagagattaatgagctggaccgaaatatgttttatgatagaacattatg 27893622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 12966145 - 12966239
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||| |||||| |||||||||||||||||    ||||||||||||||| ||||||||||||| |||||  | |||||||| ||||||| | |||||||    
T  12966145 agaggaagacctagaaaaactataagagaa----actattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattatg 12966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 36101898 - 36101826
Alignment:
Q  100 tattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||| |||| || || |||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||    
T  36101898 tattatgaaagatttatagattaatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttg 36101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 37976391 - 37976458
Alignment:
Q  95 gaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||| || |||| || ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  37976391 gaaactaatatgaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattatg 37976458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 5418224 - 5418289
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| ||  |||| ||||||||||||| || ||||||||||||||||||||||||||    
T  5418224 aaactattaagaaagattaagag-ttaatgagttggaccgaaatatggtttatgatagaacattatg 5418289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 28542069 - 28542007
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacat 158  Q
    |||||||||||||| || |||||||||||||||||||  | | ||||||||||||||||||||    
T  28542069 aaactattaagaaagatttagagattaatgagttggattgaactatggtttatgatagaacat 28542007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 35922408 - 35922486
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| || ||||| ||||||||||| | |  |||||| ||||||||||||||||||||  |||||||    
T  35922408 agaaactattaagaaagatttagaggttaatgagttgaatctaaatatgatttatgatagaacattatgacctaatttg 35922486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 36239936 - 36239845
Alignment:
Q  77 gaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||    |||||||||| |||| || |||||||||| |||||||| |  |||||| |||||||||||||||||||  ||||||||    
T  36239936 gaaaaactataaga----gaaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttg 36239845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 24549815 - 24549754
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaa 155  Q
    |||||||||||||||| ||||||||||||||||||||||  | |||||||| | ||||||||    
T  24549815 agaaactattaagaaagatctagagattaatgagttggattgaaatatggtatttgatagaa 24549754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 33731997 - 33732057
Alignment:
Q  102 ttaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||| ||||| ||||||||||||  || || ||||||||||||||||||||||||||    
T  33731997 ttaagaaagatctaaagattaatgagtgagatcgaaatatggtttatgatagaacattatg 33732057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 34341504 - 34341444
Alignment:
Q  112 tctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||| |||||||||||  | ||||||||||||||||||||||||||  ||||||||    
T  34341504 tctagagatgaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttg 34341444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 9210856 - 9210753
Alignment:
Q  65 gaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaa 164  Q
    |||| |||||| | ||||||||||||    |||||| ||| |||| || ||||| ||||||||||||| |  |||||||||||||||| |||||||||      
T  9210856 gaggaagacctaggaaaactataaga----gaaacttttaggaaaaatttagaggttaatgagttggatccaaatatggtttatgatacaacattatggc 9210761  T
Q  165 gtaatttg 172  Q
    ||||||||    
T  9210760 gtaatttg 9210753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 30144930 - 30144968
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  30144930 agaaactattaagaaagatctagagattaatgagttgga 30144968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 2882838 - 2882785
Alignment:
Q  119 attaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||| || || |||||||||||||||||||||||  ||||||||    
T  2882838 attaatgagttggatcgaaacatggtttatgatagaacattatggcgtaatttg 2882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 40980087 - 40979977
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| | ||||||||||||||||    ||||||  ||| || ||||| | ||||||||||| |  |||||||||||||||||||||    
T  40980087 agaggtagaggaagacctaggaaaactataagagaaa----ctattagaaaagatttagaggtcaatgagttggatccaaatatggtttatgatagaaca 40979992  T
Q  158 ttatgaagtaatttg 172  Q
     ||||  ||||||||    
T  40979991 ctatggcgtaatttg 40979977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 42187596 - 42187660
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    ||||||||||| ||||||| ||||||||||| ||||||| |  ||| |||||||||||||||||||    
T  42187596 agaaactattaggaaatatttagagattaattagttggatccaaat-tggtttatgatagaacatt 42187660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 19262585 - 19262517
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||| ||||  ||||||||||||||||||||||  |  ||||| | |||||||||||||||||    
T  19262585 agaaactatttagaagcatctagagattaatgagttggatagggatatgatatatgatagaacattatg 19262517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 28562493 - 28562425
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatgg-tttatgatagaacattat 161  Q
    ||||||||||| |||| || |||||||||| |||||||| | |||||||| ||||||||| ||||||||    
T  28562493 agaaactattatgaaagatttagagattaacgagttggatcctaatatggttttatgatataacattat 28562425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 36136893 - 36136986
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    ||||| |||||| ||||||||||||||||||    |||||  |||| || ||||  ||||||| ||||| |  |||||||||||||||||||||||||    
T  36136893 agaggaagacctagaaaaactataagagaaa----ctatttggaaagatttagatgttaatgaattggatccaaatatggtttatgatagaacattat 36136986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 43281986 - 43282042
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatga 150  Q
    |||||| |||||| || |||||||||||||||||||||| |  ||||||||||||||    
T  43281986 agaaacaattaagtaagatctagagattaatgagttggatcaaaatatggtttatga 43282042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 22174123 - 22174223
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| | || | ||||||||||||||||||    |||| || ||| |||||||||||||||| || ||  | |||||||| | ||||||||||    
T  22174123 agaggcagaggaaaacgtagaaaaactataagagaaa----ctataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaaca 22174218  T
Q  158 ttatg 162  Q
    |||||    
T  22174219 ttatg 22174223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 28858202 - 28858269
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||||||| |||||||||||||| |||||||  | |||||  | ||||||||||| ||||||    
T  28858202 aaactattaagaaagatctagagattaataagttggatagaaatattttatatgatagaacgttatga 28858269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 29653673 - 29653638
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagtt 129  Q
    |||||||||||||||| |||||||||||||||||||    
T  29653673 agaaactattaagaaagatctagagattaatgagtt 29653638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 30814229 - 30814174
Alignment:
Q  117 agattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||| ||||||| || |||||| |||||||||||||||||| | ||||||||    
T  30814229 agattaattagttggatcgaaatatgttttatgatagaacattatcacgtaatttg 30814174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 33103101 - 33103144
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||||||||| | || |||||||||||||||||||||    
T  33103101 tagagattaatgagttgaatcggaatatggtttatgatagaaca 33103144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 34926645 - 34926587
Alignment:
Q  95 gaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaac 156  Q
    ||||||||||||||| ||||||||||    |||||||| || ||||||||||||||||||||    
T  34926645 gaaactattaagaaagatctagagata---gagttggatcgaaatatggtttatgatagaac 34926587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 47848797 - 47848896
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| ||| || ||||||||||||||||||    |||||  |||| || | | |||||||||| |||| |  |||||||||||||||||||||    
T  47848797 agaggcagaggaagaactagaaaaactataagagaaa----ctattg-gaaagatttggggattaatgagctggatccaaatatggtttatgatagaaca 47848891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 14057633 - 14057711
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || ||||| |||||| ||| ||    ||||||||||||||||||||||||||  ||||||||    
T  14057633 agaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttg 14057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 14367661 - 14367739
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || ||||| |||||| ||| ||    ||||||||||||||||||||||||||  ||||||||    
T  14367661 agaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttg 14367739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 30814830 - 30814771
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagatt 121  Q
    ||||||||||| |||||| |||| |||||||||    ||||||||||||||| |||||||||||    
T  30814830 agaggcagaggaagacctagaaacactataaga----gaaactattaagaaagatctagagatt 30814771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 40139075 - 40138997
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| ||||||||||||||| ||| ||  | ||||||   |||||||||| ||||||| || |||||    
T  40139075 agaaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatgatagaatattatgacgtcatttg 40138997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 40391930 - 40391872
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||| |||||| ||||||| || ||||||| ||||||||||||||||||  ||||||||    
T  40391930 tagaaattaataagttggaccgaaatatggcttatgatagaacattatggcgtaatttg 40391872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 47796279 - 47796201
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||| |||||| |||| || |||| |||||| |||||||  | ||||||||||||||||||| ||||||  ||||||||    
T  47796279 agaacctattaggaaagatttagaaattaataagttggactgaaatatggtttatgatagaatattatggcgtaatttg 47796201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 5577594 - 5577546
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||| |||||||||||| |  | ||||||||||||||||||||||||    
T  5577594 tagagactaatgagttggatccaagtatggtttatgatagaacattatg 5577546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 30200083 - 30200023
Alignment:
Q  102 ttaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||| ||||||||||||||||||| ||    |||||||| ||||||||| |||||||    
T  30200083 ttaagaaagatctagagattaatgagtttgatataaatatggtatatgatagaccattatg 30200023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 43282545 - 43282626
Alignment:
Q  71 gacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaac 156  Q
    ||||| |||||||||||||||||    ||||||||| ||  ||| ||| ||| ||||||||| || |||||||||||| |||||||    
T  43282545 gacctagaaaaactataagagaa----actattaagtaagttcttgaggttattgagttggatcgaaatatggtttattatagaac 43282626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 46973720 - 46973781
Alignment:
Q  63 cagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagt 128  Q
    ||||| ||||||| |||||||| ||||||||    |||||||| ||| ||||||||||||||||||    
T  46973720 cagagatagaccttgaaaaactgtaagagaa----actattaataaacatctagagattaatgagt 46973781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 34664 - 34554
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| ||||||||||||||||||    | ||||||||| ||||| ||||||||||||||||  | |||||||||||||||||||||    
T  34664 agaggcagaggaagacctagaaaaactataagagaaa----ccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaaca 34569  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  34568 ttatggcgtaatttg 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 24665966 - 24666044
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| ||||| | ||||||||||| || |||||||||||||||||||||||||||  |||||||    
T  24665966 agaaactattaagaaatatttagaggtcaatgagttggatcgaaatatggtttatgatagaacattatgacttaatttg 24666044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 9593867 - 9593767
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| |||||| |||||||||||    |||||| |||| |  ||||||||||||||||||| |  |||||||||||||||||||||    
T  9593867 agaggtagaggaagacctagaaaaattataagagaaa----ctattaggaaagacttagagattaatgagttggatcccaatatggtttatgatagaaca 9593772  T
Q  158 ttatg 162  Q
    |||||    
T  9593771 ttatg 9593767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 33997703 - 33997603
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| | ||||||||||||||||    |||||||||||   ||||||||||||||||||||  | ||||||||  ||||| |||||    
T  33997703 agaggcagaggaagaccttggaaaactataagagaaa----ctattaagaaaagcctagagattaatgagttggatagaaatatggtacatgattgaaca 33997608  T
Q  158 ttatg 162  Q
    |||||    
T  33997607 ttatg 33997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 8364711 - 8364789
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| || |||| |||||| |||||||  | || |||||||||||||||||||||||  ||||||||    
T  8364711 agaaactattaagaaagatttagaaattaataagttggactgaaacatggtttatgatagaacattatggcgtaatttg 8364789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 5095957 - 5096067
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| ||||||||| ||||||||    || ||| |||| || ||| | ||||||||||||| |  |||||||||||||||||||||    
T  5095957 agaggtagaggaagacctagaaaaactagaagagaaa----ctcttaggaaagatttagtggttaatgagttggatcaaaatatggtttatgatagaaca 5096052  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  5096053 ttatggcgtaatttg 5096067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 31818666 - 31818764
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaat 169  Q
    |||||| |||||||||||||||||    ||||||| ||||  | | ||||||||||||||||| |  | ||||||||||||||||||||||||  |||||    
T  31818666 agacctagaaaaactataagagaa----actattaggaaaggtttggagattaatgagttggatcaaagtatggtttatgatagaacattatgtcgtaat 31818761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 6293519 - 6293451
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| |||||||||||| ||||||||||| ||  | |||||||| ||||||||| |||||||    
T  6293519 agaaactattaggaaatatctagatattaatgagttagatagaaatatggtatatgatagagcattatg 6293451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 1748072 - 1748006
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    |||||||| ||||||| || |||||||||||||||||||  | ||||| || |||||||||||||||    
T  1748072 agaaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacatta 1748006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 31831986 - 31831920
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatgg-tttatgatagaacatt 159  Q
    |||||||||||||||| |||||||||||| ||||||||| |  || |||| ||||||||||||||||    
T  31831986 agaaactattaagaaagatctagagattactgagttggatccaaacatggttttatgatagaacatt 31831920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 35199751 - 35199682
Alignment:
Q  92 aaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||| |||| ||||||||||||||||||| ||  | ||||| || |||||||||||||||||    
T  35199751 aaagaaactattaggaaagatctagagattaatgagttagatagaaatat-gtatatgatagaacattatg 35199682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 43179 - 43102
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaattt 171  Q
    |||||||||||| ||| ||||||||| |||||||||||| |  ||||| ||||||||||||  ||||||  |||||||    
T  43179 agaaactattaataaagatctagagagtaatgagttggatcaaaatatagtttatgatagagtattatggtgtaattt 43102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 33080319 - 33080368
Alignment:
Q  112 tctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    ||||||||||||||||||| | || |||||||||||||||| ||||||||    
T  33080319 tctagagattaatgagttgtatcgaaatatggtttatgatataacattat 33080368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 3210616 - 3210557
Alignment:
Q  113 ctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||||  | ||||||  ||||||||||||||||||  ||||||||    
T  3210616 ctagagattaatgagttggatggaaatatgagttatgatagaacattatggtgtaatttg 3210557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 7513074 - 7513039
Alignment:
Q  137 aatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||||||||||| ||||||||    
T  7513074 aatatggtttatgatagaacattatgacgtaatttg 7513039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 14389288 - 14389222
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    ||||||| |||||||| || ||||||||||| |||| || |  |||||||||||||||| |||||||    
T  14389288 agaaactcttaagaaagatttagagattaataagttagatccaaatatggtttatgatataacatta 14389222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 655521 - 655456
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    ||||||||||| ||||  | | ||||||||||| ||||| || |||||||||||||| ||||||||    
T  655521 agaaactattaggaaaactttcgagattaatgaattggaccgaaatatggtttatgacagaacatt 655456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 1681648 - 1681611
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgg 131  Q
    |||||||||||||||  |||||||||||||||||||||    
T  1681648 agaaactattaagaaggatctagagattaatgagttgg 1681611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 1747800 - 1747730
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||||| |||||| ||||||| ||||||||||    ||  ||||||  ||||||||||||||||||||||    
T  1747800 agaggcagaggaagacctagaaaaaccataagagaaa----ctggtaagaaggatctagagattaatgagttgga 1747730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 25574982 - 25575057
Alignment:
Q  97 aactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| ||  ||||||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttg 25575057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 44384988 - 44385063
Alignment:
Q  97 aactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||| |||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||    
T  44384988 aactattaagaaagatctagagattaataagttggatattaatatggtttatgatagaacattatgatgtaatttg 44385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 50680865 - 50680953
Alignment:
Q  60 aggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgata 152  Q
    |||||||||||||||| ||||||||||||||||||     |||| ||||| |||||||||||||||||||||| || ||||||||||||||||    
T  50680865 aggcagaggtagacctagaaaaactataagagaaat----tatttagaaagatctagagattaatgagttggatcggaatatggtttatgata 50680953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 26024977 - 26024900
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaattt 171  Q
    |||||||||||||||| |||||||||||||||||||||| ||  | |||||||||||||||||||||||  |||||||    
T  26024977 agaaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattt 26024900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 30621328 - 30621260
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| || |||||||||||| |||||| || ||||||||||||||||||||||||||    
T  30621328 agaaactattaagaaagatttagagattaatgtgttggaccgaaatatggtttatgatagaacattatg 30621260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 55007907 - 55007979
Alignment:
Q  100 tattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||| || ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||    
T  55007907 tattaagaaagatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttg 55007979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 37488216 - 37488324
Alignment:
Q  60 aggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    |||||||||||||||| |||||||||||||||||    |||||||||||| ||||||| |||||| |||| || |  ||||||||| |||||||| ||||    
T  37488216 aggcagaggtagacctagaaaaactataagagaa----actattaagaaagatctagaaattaataagtttgatcaaaatatggttaatgatagagcatt 37488311  T
Q  160 atgaagtaatttg 172  Q
    |||  ||||||||    
T  37488312 atggcgtaatttg 37488324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 7682069 - 7681970
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||||||||||||||||||    |||||||| |||||| ||||| ||||||||||||| ||  | |||||||| |||||||| |||    
T  7682069 agaggcagaggaagacctggaaaaactataaga----gaaactatcaagaaaaatctatagattaatgagttagatagaaatatggtatatgataggaca 7681974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 47147496 - 47147594
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| |||||||||||     ||||||||||||||||| ||||||||||||||||||||||  |  ||||| | ||||||||||||    
T  47147496 agaggcagaggaagacctagaaaaactata----gaagaaactattaagaaagatctagagattaatgagttggatag--atatgatatatgatagaaca 47147589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 42639147 - 42639079
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| |||||| |||||||||||||||  | |||||||| | |||||||||||||||    
T  42639147 agaaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatg 42639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 2557799 - 2557732
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||||||||||||  ||||  ||||||| |||||||| || |||||||||||||||||||||||||    
T  2557799 agaaactattaagaaggatctgaagattaacgagttggatcgaaatatggtttatgatagaacattat 2557732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 13805424 - 13805324
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| | |||| ||||||||||||||||||    |||| |||||| || | |||| |||| |||||||  | |||||||||||||||||||||    
T  13805424 agaggcagaggaaaacctagaaaaactataagagaaa----ctatgaagaaagattttgagagtaataagttggacggaaatatggtttatgatagaaca 13805329  T
Q  158 ttatg 162  Q
    |||||    
T  13805328 ttatg 13805324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 40420339 - 40420263
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||| ||| ||  |||||||||||||||| | | ||||||||||||||||||||||||| || ||||||||    
T  40420339 agaaactattaaaaaaaat--agagattaatgagttgaatcctaatatggtttatgatagaacattacgacgtaatttg 40420263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 47372774 - 47372874
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    |||||||||||||||| ||  ||||||||||||||||    ||| ||| ||| ||| ||||||||||||||||||  | |||||||| ||| ||||||||    
T  47372774 agaggcagaggtagacttgagaaaactataagagaaa----ctactaataaagatccagagattaatgagttggatagaaatatggtatattatagaaca 47372869  T
Q  158 ttatg 162  Q
    |||||    
T  47372870 ttatg 47372874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 53540413 - 53540513
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| |||||||||||||| |||    |||||| |||| |  | |||||||||||||||||    |||||||||||||||||||||    
T  53540413 agaggcagaggaagacctagaaaaactataagataaa----ctattaggaaagacttggagattaatgagttggacaaaaatatggtttatgatagaaca 53540508  T
Q  158 ttatg 162  Q
    |||||    
T  53540509 ttatg 53540513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 26025046 - 26024988
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgata 152  Q
    |||||||||||||||| |||||||||||||||||||||| ||  | |||||||||||||    
T  26025046 agaaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgata 26024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 31339690 - 31339748
Alignment:
Q  105 agaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||||    
T  31339690 agaattatctagagattaatgagttggatcgaaatatggtacatgatagaacattatga 31339748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 45204991 - 45204900
Alignment:
Q  65 gaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    |||| |||||| ||||||||||||||||||    |||||| |||| || ||||| ||||| ||||||| |  ||||||||||||||||||||||||    
T  45204991 gaggaagacctagaaaaactataagagaaa----ctattaggaaagatttagagtttaataagttggatccaaatatggtttatgatagaacatta 45204900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 51421885 - 51421963
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || ||||| ||||||| ||||| |  || |||||||||||||||||||||||| ||||||||    
T  51421885 agaaactattaggaaagatttagaggttaatgaattggatccaaaaatggtttatgatagaacattatgacgtaatttg 51421963  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 27049301 - 27049221
Alignment:
Q  97 aactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttgttcat 177  Q
    ||||||||||||| || || |||||||||||||||  |  ||||||||||||||| ||||||||||  |||||||| ||||    
T  27049301 aactattaagaaagatttatagattaatgagttggttccaaatatggtttatgatcgaacattatggcgtaatttggtcat 27049221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 34208376 - 34208328
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  34208376 tagagattaatgagttggatccaaatatggtttatgatagaacattatg 34208328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 37042791 - 37042723
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| |||||||||||| |||||||||  | |||| ||| | |||||||||||||||    
T  37042791 agaaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatg 37042723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 20105677 - 20105577
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||| ||||| |  ||||||||||||    ||||||| | ||||||| ||||||||||| ||||||||||  | |||||||| |||||||| |||    
T  20105677 agaggcagatgtagatccagaaaaactataa----aagaaacgactaagaaagatctagagattgatgagttggactgaaatatggtatatgataggaca 20105582  T
Q  158 ttatg 162  Q
    |||||    
T  20105581 ttatg 20105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 31043227 - 31043290
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||| || ||||||||||||||||||| |  |||||||||| ||||||||||    
T  31043227 agaaactattaggaaagatttagagattaatgagttggatccaaatatggtttgtgatagaaca 31043290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 34379579 - 34379626
Alignment:
Q  115 agagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||    
T  34379579 agagattaatgagttggaccgaaatatggtttatgatagaatattatg 34379626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 41192221 - 41192284
Alignment:
Q  99 ctattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||| |||||| ||||||||||||||||||||||  | |||||||| |||| ||||||||||||    
T  41192221 ctataaagaaagatctagagattaatgagttggatagaaatatggtatatggtagaacattatg 41192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 50662515 - 50662611
Alignment:
Q  62 gcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||||||| ||| |||||| |||||||||||     |||| | ||| ||||||||||||||||||| || || ||||||||||||||||  |||||||    
T  50662515 gcagaggtagtcctagaaaaattataagagaaat----tatttaaaaagatctagagattaatgagtttgatcgaaatatggtttatgataacacattat 50662610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 56439698 - 56439631
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    ||||||||||| |||| || | || |||||| ||||||| || |||||||||||||||||||||||||    
T  56439698 agaaactattatgaaagatttggaaattaattagttggatcgaaatatggtttatgatagaacattat 56439631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 29182607 - 29182645
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  29182607 agaaactattaagaagtatctagagattaatgagttgga 29182645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 5306468 - 5306529
Alignment:
Q  111 atctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||||||||| |  |||||||||||||| | |||||||||  ||||||||    
T  5306468 atctagagattaatgagttggatccaaatatggtttatgacataacattatggcgtaatttg 5306529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 10209171 - 10209229
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||| |||||||||||||||||    |||||||||||  ||||||||||||||||||||||    
T  10209171 agacctagaaaaactataagagaa----actattaagaaggatctagagattaatgagttgga 10209229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 29398984 - 29399037
Alignment:
Q  119 attaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  29398984 attaacgagttggaacgaaataaggtttatgatagaacattatggcgtaatttg 29399037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 31961425 - 31961355
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| || ||||||||| ||||||||||||||||||    |||||| |||| |||||||||| |||||||||||    
T  31961425 agaggtaggggtagacctagaaaaactataagagaaa----ctattaggaaagatctagagataaatgagttgga 31961355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 45569168 - 45569098
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||||| |||||| |||| | |||||||||||    ||||||||||| |||||||||| |||||||||||    
T  45569168 agaggcagaggaagacctagaaacattataagagaaa----ctattaagaaaaatctagagatcaatgagttgga 45569098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 55388333 - 55388260
Alignment:
Q  99 ctattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| || | |||||||||||||| || || |||||| |||||||||||||||| ||  ||||||||    
T  55388333 ctattaagaaagatttggagattaatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttg 55388260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 934558 - 934490
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||  |||||||||||||||||||||  |   |||| | |||||||||||||||||    
T  934558 agaaactattaagaaagttctagagattaatgagttggatagggttatgatatatgatagaacattatg 934490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 6843774 - 6843838
Alignment:
Q  98 actattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||| ||||||||||||||||||| ||  | |||||| | ||| |||||||||||||    
T  6843774 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatg 6843838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 7544650 - 7544602
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatg 142  Q
    |||||||||||||||| ||||||||||||||||||| || || ||||||    
T  7544650 agaaactattaagaaagatctagagattaatgagtttgatcgaaatatg 7544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 21945765 - 21945701
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacat 158  Q
    ||||||||||| |||| || | || ||||||||||||||  | ||||||||||||||||||||||    
T  21945765 agaaactattaggaaagatttggaaattaatgagttggactgaaatatggtttatgatagaacat 21945701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 26037632 - 26037564
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| |||| || ||||| | ||||||||||| |  ||||||||||||||||||||| ||||    
T  26037632 agaaactattaggaaagatttagaggtgaatgagttggatccaaatatggtttatgatagaacactatg 26037564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 34233183 - 34233086
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| | |||| |||||||||| |||||||    ||||| | ||| | ||||||||||||||||| || |  |||| ||||||||||||||||    
T  34233183 agaggcagaggaaaacctagaaaaactatcagagaaa----ctattcataaagacctagagattaatgagttagatcaaaataaggtttatgatagaaca 34233088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 49987531 - 49987640
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| |||||||||||||    |||||||||||||||| |  | ||||| |||||| |||| |  | ||||||| |||||||| ||    
T  49987531 agaggcagaggaagacctagaaaaactataag----agaaactattaagaaagacttggagataaatgagatggatccaactatggttcatgatagagca 49987626  T
Q  158 ttatgaagtaattt 171  Q
    |||||  |||||||    
T  49987627 ttatggcgtaattt 49987640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 53518448 - 53518372
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||| || |||| || ||||| ||||||||||||| |  ||||||||||||||||||||| ||||  ||||||||    
T  53518448 aaactaataggaaagatttagaggttaatgagttggatctaaatatggtttatgatagaacactatggcgtaatttg 53518372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 55300582 - 55300638
Alignment:
Q  116 gagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||  |  |||||| |||||||||||||||| ||||||||||||    
T  55300582 gagattaatgagttggttcaaaatatgttttatgatagaacattttgaagtaatttg 55300638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 8599088 - 8599000
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||| ||||||||||||||||||    ||||||||||| ||||| |  |||||||||| ||| | |||| ||| | |||||||||||||||    
T  8599088 agacctagaaaaactataagagaaa----ctattaagaaagatctaaatgttaatgagttagaaagaaataaggtatttgatagaacattatg 8599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 21107127 - 21107215
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||| |||||||||||||||||    ||||||| ||||  | ||| ||||||| ||||||| |  |||||||||||||||||||| |||||    
T  21107127 agacctagaaaaactataagagaa----actattaggaaagttttagtgattaattagttggatccaaatatggtttatgatagaactttatg 21107215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 44047491 - 44047440
Alignment:
Q  101 attaagaaatatctagagattaatgagttggaacgtaatatggtttatgata 152  Q
    ||||||||| ||||||||||||||||||||||   ||||||||| |||||||    
T  44047491 attaagaaagatctagagattaatgagttggataataatatggtatatgata 44047440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 51438623 - 51438678
Alignment:
Q  117 agattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||| | |||||||||||| ||| |||||||||  ||||||||    
T  51438623 agattaatgagttggaatgaaatatggtttataatataacattatggcgtaatttg 51438678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 31403159 - 31403093
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| |||| |||||||||||||| |||||||  | ||| |||| ||||||||| |||||||    
T  31403159 aaactattatgaaagatctagagattaattagttggatagaaatgtggtatatgatagagcattatg 31403093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31459151 - 31459217
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| |||| || ||||||||||||||||||| |  |||||||| | |||| ||||||||||    
T  31459151 aaactattaggaaagatttagagattaatgagttggatcccaatatggtgtgtgattgaacattatg 31459217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 32339716 - 32339782
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| ||||||||||| ||||||||  |  ||||| | |||||||||| ||||||    
T  32339716 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 32339782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 42293392 - 42293326
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    |||||||||||||||| ||||||| ||||||||||| ||  |  ||||||| ||||||||| |||||    
T  42293392 agaaactattaagaaagatctagaaattaatgagttagatagacatatggtatatgatagagcatta 42293326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 50967154 - 50967077
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| | |||||||| |||||||||||| | | |||||| ||||| |||| ||||||  ||||||||    
T  50967154 agaaactattaagaaaga-ctagagatcaatgagttggaatgcagtatggtatatgaaagaaaattatgtcgtaatttg 50967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 21214726 - 21214644
Alignment:
Q  77 gaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||||||||||||    |||||||||||||||  |||| ||| ||||||||||||  | |||||| | ||||||||| ||||||||    
T  21214726 gaaaaactataaga----gaaactattaagaaaggtctatagagtaatgagttggagagaaatatgatgtatgatagagcattatga 21214644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 22420844 - 22420776
Alignment:
Q  93 aagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||| |||||| ||||||||||||||||||||||  |  |||||||  |||||||| |||||||    
T  22420844 aagaaactat-aagaaagatctagagattaatgagttggatagagatatggtaaatgatagagcattatg 22420776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 31897587 - 31897517
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| || ||||||||| ||||||||||||||    |||||||||| |||  |||||||||| |||||||||||    
T  31897587 agaggtaggggtagacctagaaaaactataaga----gaaactattaggaaggatctagagataaatgagttgga 31897517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 33710079 - 33710150
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtt---tatgatagaacattatg 162  Q
    ||||||||||||||   ||||||||||||||||||||||  | |||||||||   | |||||||||||||||    
T  33710079 agaaactattaagactgatctagagattaatgagttggatagaaatatggttctatttgatagaacattatg 33710150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 46372147 - 46372217
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| || ||||||||| |||||||||||||    ||||||||||| |||  |||||||||| |||||||||||    
T  46372147 agaggtaggggtagacctagaaaaactataag----agaaactattaggaaggatctagagataaatgagttgga 46372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 2589227 - 2589295
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| ||||   ||||||||||||||||||||||    |||||||||| |||||||||| ||||    
T  2589227 agaaactatcaagatggatctagagattaatgagttggatgaaaatatggtttttgatagaacactatg 2589295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 26510563 - 26510611
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||||| |  ||||||||||  ||||||||||||||    
T  26510563 tagagattaatgagttggatccaaatatggtttgcgatagaacattatg 26510611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 40018314 - 40018250
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    ||||| |||||||| |||||||||| |||||||||||  |  ||||| | |||||||||||||||    
T  40018314 aaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacatta 40018250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 40416506 - 40416594
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||| |||||||||||||| |||    ||||||||||| ||||| |||||||||||||||| || ||||||||||||||||||||||||||    
T  40416506 agacctagaaaaactataagacaaa----ctattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatg 40416594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 43375722 - 43375647
Alignment:
Q  97 aactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||| || ||||||||||||||||||| || ||||||||| |||||||||||||||||  |||||||    
T  43375722 aactattaagaaagatttagagattaatgagttggaccgaaatatggttcatgatagaacattatgacataatttg 43375647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 52532743 - 52532665
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || |||| ||||||||||||||||  ||||||||||||||||||||||||||  ||||||||    
T  52532743 agaaactattaggaaagatttagaaattaatgagttggaacaaaatatggtttatgatagaacattatggcgtaatttg 52532665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 3819009 - 3818915
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||| |||||| ||||||||||||||||||    ||||||||||| || ||||||||||||||||| |  | ||||||||||||||| ||||||||||    
T  3819009 agaggaagaccttgaaaaactataagagaaa----ctattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattatg 3818915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 8796364 - 8796441
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaattt 171  Q
    |||||||||||||||| ||||||| |||||||| |||||  | ||||||||||||||||||||||||||  |||||||    
T  8796364 agaaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaattt 8796441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 990585 - 990518
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||||||| ||| | |||||||||||||||||||||| |   ||||||||||||||||||||||||    
T  990585 agaaactattgagatagatctagagattaatgagttggatcaacatatggtttatgatagaacattat 990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 6025728 - 6025824
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| |||||||||||||||| |    ||| ||| ||| ||||||||||||||||||||||  | |||||||| | ||||||||||    
T  6025728 agaggcagaggaagacctagaaaaactataagagata----ctagtaaaaaagatctagagattaatgagttggatagaaatatggtatctgatagaaca 6025823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 38869005 - 38869105
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||| | |||||| ||||||||||||||||||     |||||||||| |||||| |||||||| ||||||  |  ||||||| ||||||||||||    
T  38869005 agaggcagaagaagacctagaaaaactataagagaaat----tattaagaaagatctagcgattaatgggttggatagatatatggtatatgatagaaca 38869100  T
Q  158 ttatg 162  Q
    |||||    
T  38869101 ttatg 38869105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 13827707 - 13827638
Alignment:
Q  96 aaactattaagaaata--tctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||||||| |  |||||||||||||||||||||  | |||||||| ||||||||||||||||||    
T  13827707 aaactattaagaaaaaagtctagagattaatgagttggatagaaatatggtatatgatagaacattatga 13827638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 27520334 - 27520256
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||  ||| || |||||||||||||| |||| |  |||||| |||||||||||||||||||| ||||||||    
T  27520334 agaaactattagaaaaaatttagagattaatgagctggatccaaatatgatttatgatagaacattatgatgtaatttg 27520256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 29577267 - 29577202
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| ||||||||||||||||| |||| |  ||||||| ||||||||||||||||||    
T  29577267 aaactattaagaaagatctagagattaatgagctggatcaaaatatgg-ttatgatagaacattatg 29577202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 41560384 - 41560462
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| || | || ||||||||||||||||||| |  ||||||| ||||||||||||||||||  ||||||||    
T  41560384 agaaactattaggatacatttagagattaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttg 41560462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 9599553 - 9599443
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| ||||||||| ||||||||    |||||| ||||||| ||||| |||||||||| || |   |||||||||||||||||||     
T  9599553 agaggtagaggaagacctagaaaaactacaagagaaa----ctattaggaaatatttagagtttaatgagtttgatccagatatggtttatgatagaacg 9599458  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  9599457 ttatggcgtaatttg 9599443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 10569200 - 10569131
Alignment:
Q  92 aaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    |||||||||||||||||| |||||||||||||| || ||||  | ||||| || ||||||||||||||||    
T  10569200 aaagaaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaacattat 10569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 42501231 - 42501329
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| | |||| ||||||||||||||||||     |||||||||| ||||| ||||||||||||||||  | |||||||  ||||||||||||    
T  42501231 agaggtagaggaaaacctagaaaaactataagagaaat----tattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaaca 42501326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 51812664 - 51812741
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaattt 171  Q
    ||||||| |||||||| |||||||  |||||||||| || || ||||||||||||||||||| ||||||  |||||||    
T  51812664 agaaacttttaagaaagatctagatgttaatgagttagatcgaaatatggtttatgatagaatattatgccgtaattt 51812741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 39515995 - 39515927
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||| | ||||| |||||||||||||| |  ||||||| ||||| ||||||||||||    
T  39515995 agaaactattaagaaaaacctagaaattaatgagttggatcaaaatatggattatggtagaacattatg 39515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 5338879 - 5338946
Alignment:
Q  105 agaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||| |||||||||||||||||||||| || ||| || ||||| |||||||||||||  ||||||||    
T  5338879 agaaagatctagagattaatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttg 5338946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 6084150 - 6084208
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| ||||  ||||||||    
T  6084150 tagagattaatgagttggatcaaaatatggtttatgatagaacaatatggcgtaatttg 6084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 8343034 - 8342939
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||| |||||| |||||||||||||||||| ||    |||| ||| ||||||||||||||||||||||  | ||||| || | |||| |||||||||||    
T  8343034 agaggaagacctagaaaaactataagagaaacaa----ttaataaagatctagagattaatgagttggatagaaatatagtatttgatggaacattatga 8342939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 12135862 - 12135900
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  12135862 agaaactattaagaaaaatctagagattaatgagttgga 12135900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 29128919 - 29129006
Alignment:
Q  71 gacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||| |||||||||||||||||    ||||||| |||| || ||||| ||||  ||||||| |  ||||||||||||||||||||||||||    
T  29128919 gacctagaaaaactataagagaa----actattaggaaagatttagaggttaacaagttggatccaaatatggtttatgatagaacattatg 29129006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 8203281 - 8203223
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||| ||||||||||||||||||    ||||||| ||| ||||||||||||||||||||||    
T  8203281 agacctagaaaaactataagagaaa----ctattaaaaaagatctagagattaatgagttgga 8203223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 19969359 - 19969301
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||| ||||||||||||||||||    ||||||| ||| ||||||||||||||||||||||    
T  19969359 agacctagaaaaactataagagaaa----ctattaacaaagatctagagattaatgagttgga 19969301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 25715432 - 25715375
Alignment:
Q  115 agagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| | || ||||||||||||||||||| ||||||  ||||||||    
T  25715432 agagattaatgagttgaaccgaaatatggtttatgatagaatattatggcgtaatttg 25715375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 30834136 - 30834066
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| ||||| |||||| ||||| ||||||||||||    |||||| |||| ||||||||||||||||||||||    
T  30834136 agagggagaggaagacctagaaaagctataagagaaa----ctattacgaaagatctagagattaatgagttgga 30834066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 36339962 - 36339853
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| |||||||||| |||||||    |||||| |||| || | || ||||||||||||||  | || |||||| |||||| ||||    
T  36339962 agaggtagaggaagacctagaaaaactatcagagaaa----ctattaggaaagattt-gaaattaatgagttggacagaaacatggttaatgataaaaca 36339868  T
Q  158 ttatgaagtaatttg 172  Q
    |||||||||||||||    
T  36339867 ttatgaagtaatttg 36339853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 39777000 - 39776959
Alignment:
Q  116 gagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  39777000 gagattaatgagttggatcgaaatatggtttatgatagaaca 39776959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 7762583 - 7762486
Alignment:
Q  71 gacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatt 170  Q
    ||||| ||||||||||||||||||    ||||||  ||| || ||||  ||||||||||||| |  |||||||||||| |||||||||||||  ||||||    
T  7762583 gacctagaaaaactataagagaaa----ctattagaaaagatttagatgttaatgagttggatctaaatatggtttataatagaacattatggtgtaatt 7762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 28511906 - 28511850
Alignment:
Q  116 gagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||| |  || |||||||||||||||||||||||  ||||||||    
T  28511906 gagattaatgagttggaccaaaacatggtttatgatagaacattatggcgtaatttg 28511850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 52900749 - 52900701
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||||||||  | ||||||||||||||||||||| ||||    
T  52900749 tagagattaatgagttggactgaaatatggtttatgatagaacactatg 52900701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 27072607 - 27072536
Alignment:
Q  101 attaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||| |||| || |||| ||||| ||||||||  | ||||||||||||||||||||||||||  ||||||||    
T  27072607 attaggaaagatttagaaattaaagagttggacagaaatatggtttatgatagaacattatggcgtaatttg 27072536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 40920639 - 40920588
Alignment:
Q  111 atctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||||||||||  | |||||||| |||||||||| ||||||    
T  40920639 atctagagattaatgagttggatagaaatatggtatatgatagaatattatg 40920588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 50636238 - 50636305
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||||| | |||||||||||| |||||||||    |||||||| ||||||||| ||||||||    
T  50636238 aaactattaagataaatctagagattattgagttggataaaaatatggtatatgatagagcattatga 50636305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 5338847 - 5338885
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaaga 96  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  5338847 agaggcagaagtagacctagaaaaactataagagaaaga 5338885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 8676992 - 8676942
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggt 144  Q
    |||||||||||| ||| || ||||||||||||||||||| || ||||||||    
T  8676992 agaaactattaaaaaagatttagagattaatgagttggaccgaaatatggt 8676942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 12930438 - 12930360
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||| ||||| |||| || || |||||| ||||||||| |  |||||| |||||||||||| ||||||| ||||||||    
T  12930438 agaaattattatgaaaaatttaaagattagtgagttggatccaaatatgatttatgatagaagattatgacgtaatttg 12930360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 17233896 - 17233830
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| ||| || ||||| |||||||||  | |||||||| ||||||||| |||||||    
T  17233896 aaactattaagaaagatccagcgattattgagttggataggaatatggtatatgatagagcattatg 17233830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 28528510 - 28528548
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  28528510 agaaactattaagaaggatctagagattaatgagttgga 28528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 34444531 - 34444589
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| |  |||||||||||| ||| |||||||||  ||||||||    
T  34444531 tagagattaatgagttggatccaaatatggtttataataaaacattatggtgtaatttg 34444589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 39140670 - 39140748
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || ||||| ||||| ||||||| |  ||||||||||  ||||||||||||||  ||||||||    
T  39140670 agaaactattaggaaaaatttagaggttaattagttggatccaaatatggtttcagatagaacattatggcgtaatttg 39140748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 1661574 - 1661639
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    ||||||||||| |||| || |||| ||||| |||||||| || ||| |||||| ||||||||||||    
T  1661574 agaaactattaggaaagatttagaaattaacgagttggaccgaaatgtggtttgtgatagaacatt 1661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 31274519 - 31274450
Alignment:
Q  103 taagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||| ||||||||||| ||||||| ||  | |||||||||||||||| ||| |||||  ||||||||    
T  31274519 taagaaagatctagagatttatgagttagattgaaatatggtttatgatataacgttatggcgtaatttg 31274450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 32404685 - 32404575
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| ||||||  |||||||||||||||||    |||||| |||| || ||||||||||||||||  | |  || ||||||||||||| ||||    
T  32404685 agaggtagaggaagacctacaaaaactataagagaaa----ctattaggaaagatttagagattaatgagttaaatccaaacatggtttatgatataaca 32404590  T
Q  158 ttatgaagtaatttg 172  Q
    | |||  ||||||||    
T  32404589 taatggcgtaatttg 32404575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 2544776 - 2544816
Alignment:
Q  122 aatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| || |||||||||||| |||||||||||||    
T  2544776 aatgagttggagcgaaatatggtttataatagaacattatg 2544816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 10585022 - 10584986
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  10585022 aaactattaagaaagatccagagattaatgagttgga 10584986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 11941687 - 11941639
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| ||||||||| || | |||||||||||||| |||||||||    
T  11941687 tagagattattgagttggatcggagtatggtttatgataaaacattatg 11941639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 14557743 - 14557791
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||| |||||||||||||| || ||| | ||||||||||||||||||||    
T  14557743 tagaaattaatgagttggaccgaaatgtagtttatgatagaacattatg 14557791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 9235172 - 9235270
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| |||||||||      | |||||||||||||||| || |||||||||||||| |||| || |||||||||||||||||||||    
T  9235172 agaggcagaggaagacctagaaaaacta------agagaaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaaca 9235265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 30588582 - 30588671
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||| ||||||||||||||||||     | |||||||| |||||||||| ||||||||||| || |||||||||||| ||||||||||||||    
T  30588582 agacctagaaaaactataagagaaat----tgttaagaaagatctagagatgaatgagttggatcgaaatatggtttataatagaacattatga 30588671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 12577019 - 12576919
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| ||||||||| |||| |||    ||||||||||| |||||||||||||||||||| |  | |||||||| ||||||||| ||    
T  12577019 agaggcagaggaagacctagaaaaactacaagataaa----ctattaagaaagatctagagattaatgagttgaatagaaatatggtatatgatagacca 12576924  T
Q  158 ttatg 162  Q
    |||||    
T  12576923 ttatg 12576919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 7359387 - 7359310
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||| ||||| |||||||||||||| ||||||| || ||||||||||| |||| |||||||||| ||||||||    
T  7359387 agaaactatttagaaaaatctagagattaataagttggatcgaaatatggtttacgata-aacattatgacgtaatttg 7359310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 14667926 - 14668004
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||| ||| ||||||| |||||||||||||||||||||| |  | ||||||||||||||||||||||||  ||||||||    
T  14667926 agaagctactaagaaagatctagagattaatgagttggatccaagtatggtttatgatagaacattatggtgtaatttg 14668004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 43475394 - 43475472
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| ||| |||||||||||||||||| || |||||| |||||| |||||| |||||  ||||||||    
T  43475394 agaaactattaagaaagatccagagattaatgagttggatcgaaatatgatttatggtagaacgttatggtgtaatttg 43475472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 14749432 - 14749530
Alignment:
Q  60 aggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    ||||||||| |||||| ||||||||||||||||||    |||| |||||  ||||||||||||| ||||||||  | |||||||||| |||||||||| |    
T  14749432 aggcagaggaagacctagaaaaactataagagaaa----ctatcaagaaggatctagagattaacgagttggatagaaatatggtttttgatagaacact 14749527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 11675656 - 11675753
Alignment:
Q  62 gcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaa-tatggtttatgatagaacatta 160  Q
    ||||||| ||||||| |||||||||||||||||    |||||| || | || |||||||||||||||||||   ||| ||||||||||||||||||||||    
T  11675656 gcagaggaagacctgtaaaaactataagagaaa----ctattaggacagatttagagattaatgagttggattttaaatatggtttatgatagaacatta 11675751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 6889117 - 6889225
Alignment:
Q  59 gaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacat 158  Q
    |||| ||||| || ||| |||||||||||||||||    ||||||| |||| || ||||||||||| ||||||  |  ||||||||||||||||||||||    
T  6889117 gaggaagaggaaggcctagaaaaactataagagaa----actattaggaaagatttagagattaattagttgggccaaaatatggtttatgatagaacat 6889212  T
Q  159 tatgaagtaattt 171  Q
    ||||  |||||||    
T  6889213 tatggcgtaattt 6889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 7678633 - 7678710
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||| ||||| |||||||||||||||||||||| || |||| ||||||| ||| |||||||||| ||| ||||    
T  7678633 agaaactatttagaaagatctagagattaatgagttggatcgaaatacggtttataata-aacattatgaggtagtttg 7678710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 20367065 - 20367126
Alignment:
Q  111 atctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||||||||| |  |||||||||||||| | |||||||||| ||||||||    
T  20367065 atctagagattaatgagttggatccaaatatggtttatgacataacattatgacgtaatttg 20367126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 418158 - 418083
Alignment:
Q  97 aactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||| ||| |||| || ||||||||||||||||||| |  ||| ||||||||||||||||||||||  ||||||||    
T  418158 aacttttaggaaagatttagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttg 418083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 43557938 - 43557891
Alignment:
Q  116 gagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||    
T  43557938 gagattattgagttggatcgaaatatggtttatgatagaacattatga 43557891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 23980099 - 23980168
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||| ||||  || || |||||||||||||||| |  ||||||||||||||||||||| |||||    
T  23980099 agaaactattgagaatgatttatagattaatgagttggatctaaatatggtttatgatagaacaatatga 23980168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 35615438 - 35615507
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||| | ||| || |||||||||||||||||||    ||||| |||||||||||||||||||||    
T  35615438 agaaactattcataaaaatttagagattaatgagttggataaaaatatagtttatgatagaacattatga 35615507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 17340560 - 17340496
Alignment:
Q  97 aactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    ||||||||||||| || ||||| |||||||||| || |  |||||||||||||||| ||||||||    
T  17340560 aactattaagaaagatttagaggttaatgagtttgatccaaatatggtttatgatataacattat 17340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 38684635 - 38684703
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||| |||||||| |||||||||||||| |||||||  | ||||||||   |||||||||||||||    
T  38684635 agaaacttttaagaaagatctagagattaattagttggatagaaatatggtacttgatagaacattatg 38684703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 43035136 - 43035204
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| |||| || | || ||| |||||||||| || |||||||| |||||||||||||||||    
T  43035136 agaaactattaggaaaaatttggaaatttatgagttggaccgaaatatggtgtatgatagaacattatg 43035204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 6859504 - 6859604
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| ||||||||||||||||||    |||||| |||| || || |||||| | | ||||  |  |||||||||||||||||||||    
T  6859504 agaggaagaggaagacctagaaaaactataagagaaa----ctattaggaaagatttacagattagttacttgggccaaaatatggtttatgatagaaca 6859599  T
Q  158 ttatg 162  Q
    |||||    
T  6859600 ttatg 6859604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 29922413 - 29922517
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||| ||| || |||||||||||||||||    |||||||||||| || ||||||||||  |||||||  | ||  ||||||| ||||||||||||||     
T  29922413 agaggaagatctagaaaaactataagagaa----actattaagaaagatttagagattaacaagttggactgaaacctggtttacgatagaacattatgg 29922508  T
Q  164 agtaatttg 172  Q
     ||||||||    
T  29922509 cgtaatttg 29922517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 38341552 - 38341479
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaattt 171  Q
    |||||||||||||||  || |||||||||||   ||||| || | ||||||||||||||||||||||||| |||||||    
T  38341552 agaaactattaagaag-atatagagattaat---ttggatcgaagtatggtttatgatagaacattatgacgtaattt 38341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 42504331 - 42504296
Alignment:
Q  137 aatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||||||||||| ||||||||    
T  42504331 aatatggtttatgatagaacattatgacgtaatttg 42504296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 15252848 - 15252802
Alignment:
Q  117 agattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||||| |||||||| || |||| ||||||||||||||||||||||    
T  15252848 agattaacgagttggatcgaaatagggtttatgatagaacattatga 15252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 27998570 - 27998665
Alignment:
Q  64 agaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    ||||| |||||| ||||||||||||||||||    ||| ||||||| ||||| ||||||||||||| ||  | || ||| | |||||||||| |||||||    
T  27998570 agaggaagacctagaaaaactataagagaaa----ctactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatattatga 27998665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 28186902 - 28186864
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||||| || |||||||||||||||||||    
T  28186902 agaaactattaagaaagatttagagattaatgagttgga 28186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 2713079 - 2713137
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||| |||||||||||||||||    |||||||||||  |||||||||| |||||||||||    
T  2713079 agacctagaaaaactataagagaa----actattaagaaggatctagagatgaatgagttgga 2713137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 18698917 - 18698987
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||||| | |||| ||||||||||||||||| |    ||| |||||| |||||||||||| |||||||||    
T  18698917 agaggcagaggaatacctagaaaaactataagagaatg----tatcaagaaagatctagagattagtgagttgga 18698987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 28005692 - 28005725
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagtt 129  Q
    |||||||||||||| |||||||||||||||||||    
T  28005692 aaactattaagaaagatctagagattaatgagtt 28005725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 39322191 - 39322138
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatg 149  Q
    |||||||||||||| ||||| ||||||||||||||||  | ||||| |||||||    
T  39322191 aaactattaagaaagatctaaagattaatgagttggatagaaatatagtttatg 39322138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 28012 - 28105
Alignment:
Q  65 gaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||| |||||| |||||||||||||||||    ||||||| |||| || ||||| ||||| ||||||| |  |||||| ||| |||||||||| ||||    
T  28012 gaggaagacctagaaaaactataagagaa----actattaggaaagatttagaggttaataagttggatccaaatatgatttctgatagaacactatg 28105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 2066150 - 2066190
Alignment:
Q  92 aaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  2066150 aaagaaactactaaaaaagatctagagattaatgagttgga 2066190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 4460360 - 4460400
Alignment:
Q  92 aaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||| |||||||||||| | ||||||||||||||||||||    
T  4460360 aaagagactattaagaaagacctagagattaatgagttgga 4460400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 15369947 - 15369886
Alignment:
Q  67 ggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||| |||||| |||||||||||    ||||||||||| ||||| |||| |||||||||||    
T  15369947 ggtagacctagaaaaagtataagagaaa----ctattaagaaaaatctaaagataaatgagttgga 15369886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 36304123 - 36304199
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||| |||||||||||||||||||||| |  ||||||||||||||||| ||||||||  ||||||||    
T  36304123 aaactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaatttg 36304199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 19758044 - 19758110
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| ||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  19758044 aaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgatagaacattatg 19758110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 39600840 - 39600730
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| ||||||||||||||||||    ||||||||||| || ||||| ||||||||||||| |  ||| ||||||| |||||||||    
T  39600840 agaggtagaggaagacctagaaaaactataagagaaa----ctattaagaaagatttagaggttaatgagttggatccaaatctggtttacgatagaaca 39600745  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  39600744 ttatggtgtaatttg 39600730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 40116615 - 40116530
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    |||||| ||||||||||||||||||    |||||| || | || ||||||||||||||||||| || |||||||||||||||||||||||    
T  40116615 agacctagaaaaactataagagaaa----ctattaggatagatttagagattaatgagttggaccgaaatatggtttatgatagaacatt 40116530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 49841771 - 49841839
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||| ||| ||||| |||||||||||||||| || |||||||| |||||||||||||||||    
T  49841771 agaaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattatg 49841839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 29475840 - 29475919
Alignment:
Q  93 aagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||| | ||||  ||||||||    
T  29475840 aagaaactattaagaaagatctagagattaatgagttggattgaaatattgtttatgatagaaaactatggcgtaatttg 29475919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 45289218 - 45289151
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattat 161  Q
    ||||||||||| |||| || ||||||||||||||||||| |  |||||||||||||||||||||||||    
T  45289218 agaaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattat 45289151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 19737141 - 19737207
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| ||||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||    
T  19737141 aaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgataaaacattatg 19737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 23534697 - 23534619
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||    
T  23534697 agaaactattaggaaagacttagagattaatgagttggactgtaatatgatttatgatagaacattatggcgtaatttg 23534619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 40116445 - 40116387
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||||    
T  40116445 tagagattaatgagttggaccgaaatatggtttatgatagaacattatggcgtaatttg 40116387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 29601052 - 29601125
Alignment:
Q  99 ctattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| || |||||||||||||||||||    ||||| ||||||||||||||||||||| ||||||||    
T  29601052 ctattaagaaagatttagagattaatgagttggattcaaatatagtttatgatagaacattatgatgtaatttg 29601125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 54365134 - 54365024
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| ||||||||||||||||||    |||||| |||| |  | |||||||||| ||| || |  |||||||||||||||||||||    
T  54365134 agaggcagaggaagacctagaaaaactataagagaaa----ctattaggaaagacttggagattaatgtgttagaccaaaatatggtttatgatagaaca 54365039  T
Q  158 ttatgaagtaatttg 172  Q
     ||||| ||||||||    
T  54365038 ctatgacgtaatttg 54365024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 55244441 - 55244501
Alignment:
Q  102 ttaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||| ||||||||||||||||||||||  | |||||||| |||||||||||||||||    
T  55244441 ttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaacattatg 55244501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 37598297 - 37598229
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||||| ||||||||||||||||||||||||  |   |||| | |||||||||||||||||    
T  37598297 agaaactattaagatatatctagagattaatgagttggataggggtatgatatatgatagaacattatg 37598229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 40991609 - 40991664
Alignment:
Q  117 agattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  40991609 agattaatgagttggaccaaaatatggtttatgatagaacattatggtgtaatttg 40991664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 44571584 - 44571643
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaa 155  Q
    ||||||| | ||||||| ||||||||||||||||||| |  |||||||||||||||||||    
T  44571584 aaactataaggaaatatttagagattaatgagttggatccaaatatggtttatgatagaa 44571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 36820122 - 36820067
Alignment:
Q  72 acctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgg 131  Q
    |||| ||||||||||||||||||    ||||||||||| |||||||||||||||||||||    
T  36820122 acctagaaaaactataagagaaa----ctattaagaaagatctagagattaatgagttgg 36820067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 54128501 - 54128602
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||| ||||| |||||| |||||||||| |   | ||||||||| | |||| || ||||| | ||||||||||| |  |||||||||||||||||||||    
T  54128501 agaggtagaggaagacctagaaaaactatta---agagaaactataaggaaagatttagaggtcaatgagttggacccaaatatggtttatgatagaaca 54128597  T
Q  158 ttatg 162  Q
    |||||    
T  54128598 ttatg 54128602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 51027756 - 51027835
Alignment:
Q  137 aatatggtttatgatagaacattatgaagtaatttgtt-------catttagtgggataagactttgttgttattgttgt 209  Q
    ||||||||||||||||||||||||||| |||||||| |       ||  |||||||||||||||| ||||||||||||||    
T  51027756 aatatggtttatgatagaacattatgacgtaatttgatctgaccccacatagtgggataagacttagttgttattgttgt 51027835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 40106721 - 40106669
Alignment:
Q  120 ttaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||| |  |||||||||||||||||||||||||||  |||||||    
T  40106721 ttaatgagttggatccaaatatggtttatgatagaacattatgacataatttg 40106669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 41452865 - 41452829
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  41452865 aaactattaagaaagatctagagattaatgagttgga 41452829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 41842648 - 41842572
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||| |||| | |||||||| |||||||||| ||  | |||||||||| |||||||||||||||  ||||||||    
T  41842648 aaactataaagatagatctagaggttaatgagttagattgaaatatggtttttgatagaacattatggtgtaatttg 41842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 43308717 - 43308781
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacat 158  Q
    |||||||||||||||| |||||||||||||| |||||||  |  ||||| | |||||||||||||    
T  43308717 agaaactattaagaaaaatctagagattaatcagttggatagagatatgatatatgatagaacat 43308781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 45486999 - 45486908
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacg---taatatggtttatgatagaacattatg 162  Q
    |||||| ||||||||||||||||||    |||||| |||| |  | ||||||||||| |||||||    |||||||||||||||||||||||||||    
T  45486999 agacctagaaaaactataagagaaa----ctattatgaaagactttgagattaatgacttggaaccaaataatatggtttatgatagaacattatg 45486908  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 45493852 - 45493751
Alignment:
Q  57 cagaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaac 156  Q
    |||||||||||| | |||| || |||||||||    ||||||||||||||||| ||| |||| |||||||| ||||  | || ||||| ||||||||| |    
T  45493852 cagaggcagagggatacctagataaactataa----aagaaactattaagaaagatccagaggttaatgagctggatagaaacatggtatatgatagagc 45493757  T
Q  157 attatg 162  Q
    ||||||    
T  45493756 attatg 45493751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 33700338 - 33700373
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagtt 129  Q
    |||| |||||||||||||||||||||||||||||||    
T  33700338 agaagctattaagaaatatctagagattaatgagtt 33700373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 172
Target Start/End: Original strand, 39208806 - 39208841
Alignment:
Q  137 aatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||||||||||| ||||||||    
T  39208806 aatatggtttatgatagaacattatgacgtaatttg 39208841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 48657453 - 48657398
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgat 151  Q
    |||||||||||||| ||||| |||||||||||||| | || ||||| |||||||||    
T  48657453 aaactattaagaaaaatctatagattaatgagttgtatcgaaatatagtttatgat 48657398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 49042091 - 49042170
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatgg-tttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| || ||||| ||||||||||||| |  ||||||| |||||||||||||| ||||  ||||||||    
T  49042091 agaaactattaggaaagatttagaggttaatgagttggatccaaatatggttttatgatagaacactatggcgtaatttg 49042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 2340844 - 2340810
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagt 128  Q
    |||||||||||||||| ||||||||||||||||||    
T  2340844 agaaactattaagaaagatctagagattaatgagt 2340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 33755501 - 33755393
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| | |||| ||||||||||||||    |||||||||| |||| |  ||||||||||||||||||| |   ||||||||  |||  |||||    
T  33755501 agaggcagaggaaaacctagaaaaactataaga----gaaactattaggaaaaacttagagattaatgagttggaccaagatatggtt--tgagtgaaca 33755408  T
Q  158 ttatgaagtaatttg 172  Q
    |||||| ||||||||    
T  33755407 ttatgacgtaatttg 33755393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 38431023 - 38431069
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    ||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  38431023 tagaggttaatgagttggatccaaatatggtttatgatagaacatta 38431069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 39235295 - 39235361
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||| |||| || ||||  ||||||||||||| |  ||||||||||| ||||||||||||||    
T  39235295 aaactattaggaaagatttagaagttaatgagttggatctaaatatggtttacgatagaacattatg 39235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 46431819 - 46431768
Alignment:
Q  77 gaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    ||||||||||||||    ||||||||||| ||| ||||||||||||||||||||||    
T  46431819 gaaaaactataaga----gaaactattaaaaaagatctagagattaatgagttgga 46431768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 50960764 - 50960686
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| ||||  | ||||||||||||||||||| |  |||||||| ||| ||||| |||||||  ||||||||    
T  50960764 agaaactattaggaaaggtttagagattaatgagttggatccaaatatggtgtatcatagaccattatggtgtaatttg 50960686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 2195273 - 2195306
Alignment:
Q  139 tatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||||||||||||||| ||||||||    
T  2195273 tatggtttatgatagaacattatgatgtaatttg 2195306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 37534329 - 37534264
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatt 159  Q
    |||||||||||||||| |||| ||||||||||| || ||  | ||||| ||||||||| |||||||    
T  37534329 agaaactattaagaaagatcttgagattaatgaatttgattgaaatatagtttatgattgaacatt 37534264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 37779052 - 37779101
Alignment:
Q  114 tagagattaatgagttggaacgtaatatggtttatgatagaacattatga 163  Q
    |||||||||||||| | || |  |||||||||||||||||||||||||||    
T  37779052 tagagattaatgagctagatccgaatatggtttatgatagaacattatga 37779101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 41482298 - 41482186
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaata-tctagagattaatgagttggaacgtaatatggtttatgatagaac 156  Q
    ||||||||||| |||||| |||||||| | |   | ||||||||||| |||| | | | ||||||||||||||| | |  ||| ||||||||||||||||    
T  41482298 agaggcagaggaagacctagaaaaactttta---agagaaactattaggaaagactttggagattaatgagttgaaccaaaatctggtttatgatagaac 41482202  T
Q  157 attatgaagtaatttg 172  Q
    ||||||  ||||||||    
T  41482201 attatggcgtaatttg 41482186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 42510175 - 42510065
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||| ||| |||||| |||||||||| |||||||    | |||| |||| || | || || ||||||||||| |  ||||||||||||||| |||||    
T  42510175 agaggcaaaggaagacctagaaaaactatcagagaaa----ccattaggaaagatttggaaataaatgagttggaccaaaatatggtttatgattgaaca 42510080  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  42510079 ttatggcgtaatttg 42510065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 19676208 - 19676140
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||| |||| || ||||| ||||||||||||| |  |||||| | ||||||||| |||||||    
T  19676208 agaaactattaggaaaaatttagaggttaatgagttggatccaaatatgctgtatgatagagcattatg 19676140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 31261101 - 31261065
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaa 94  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  31261101 agaggcagaggaagacctagaaaaactataagagaaa 31261065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 32170578 - 32170638
Alignment:
Q  112 tctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||||| |||||||  | |||||||| ||||||| ||||||||||  |||||||    
T  32170578 tctagagattaataagttggatagaaatatggtctatgatataacattatgacataatttg 32170638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 42026663 - 42026595
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    ||||||||||||||   || ||| |||||||||||| ||  | |||||||| |||||||||||||||||    
T  42026663 agaaactattaagattgatatagggattaatgagttagatagaaatatggtatatgatagaacattatg 42026595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 50237759 - 50237695
Alignment:
Q  96 aaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacatta 160  Q
    |||||||||||||| ||  |||||||| |||||||||  | ||||| || |||||||||||||||    
T  50237759 aaactattaagaaagattcagagattattgagttggatagaaatattgtatatgatagaacatta 50237695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 66660 - 66771
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga-acgtaatatggtttatgatagaac 156  Q
    ||||||||||| |||||| |||||| |||||    || ||| |||||||||| ||||||||||||||||||| || | | ||||||| ||||||||||||    
T  66660 agaggcagaggaagacctagaaaaattataa----aaaaaattattaagaaagatctagagattaatgagttagataggaaatatggcttatgatagaac 66755  T
Q  157 attatgaagtaatttg 172  Q
    ||||||  ||||||||    
T  66756 attatggcgtaatttg 66771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 160451 - 160373
Alignment:
Q  94 agaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttg 172  Q
    ||||||||||| |||| ||  ||| ||||||||||| || || ||||||||||||||||||||||||||  ||||||||    
T  160451 agaaactattaggaaagattaagaaattaatgagttcgaccgaaatatggtttatgatagaacattatggcgtaatttg 160373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 3986 - 3889
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||||||||||  |||||||||||||||||    ||||| ||||| |||   ||||||||||||||||    ||||||||||||||| |||||    
T  3986 agaggcagaggtagaccta-aaaaactataagagaaa----ctatttagaaaaatcattagattaatgagttggattaaaatatggtttatgattgaaca 3892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 58385 - 58275
Alignment:
Q  58 agaggcagaggtagacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaaca 157  Q
    ||||||||||| |||||| ||||||| ||||||||||    || ||| |||| |  | ||||| ||||||||||| |   ||||||||||||||||||||    
T  58385 agaggcagaggaagacctagaaaaacgataagagaaa----ctgttaggaaaaacttggagatcaatgagttggaccaagatatggtttatgatagaaca 58290  T
Q  158 ttatgaagtaatttg 172  Q
    |||||  ||||||||    
T  58289 ttatgtcgtaatttg 58275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 178567 - 178509
Alignment:
Q  70 agacctggaaaaactataagagaaagaaactattaagaaatatctagagattaatgagttgga 132  Q
    |||||| ||||||||||||||||||    ||||||||||| || |||||||||||||||||||    
T  178567 agacctagaaaaactataagagaaa----ctattaagaaagatatagagattaatgagttgga 178509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 2424 - 2360
Alignment:
Q  98 actattaagaaatatctagagattaatgagttggaacgtaatatggtttatgatagaacattatg 162  Q
    |||||||||||| ||||||||||||||||||| ||  | |||||| | ||| |||||||||||||    
T  2424 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatg 2360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1858 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1858
Description:

Target: scaffold1858; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 976 - 920
Alignment:
Q  120 ttaatgagttggaacgtaatatggtttatgatagaacattatgaagtaatttgttca 176  Q
    ||||||||||||| || |||||||||||| ||| |||||||||   |||||||||||    
T  976 ttaatgagttggaccgaaatatggtttataataaaacattatggcataatttgttca 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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