View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0954_low_35 (Length: 239)

Name: NF0954_low_35
Description: NF0954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0954_low_35
NF0954_low_35
[»] chr6 (8 HSPs)
chr6 (11-174)||(1646980-1647143)
chr6 (11-174)||(23998200-23998363)
chr6 (11-174)||(16380539-16380702)
chr6 (11-174)||(16648135-16648298)
chr6 (11-174)||(14130421-14130584)
chr6 (11-174)||(16099961-16100130)
chr6 (11-106)||(23025912-23026007)
chr6 (25-164)||(14643667-14643803)
[»] chr3 (8 HSPs)
chr3 (11-174)||(15611820-15611983)
chr3 (11-174)||(8272659-8272822)
chr3 (11-174)||(30139523-30139686)
chr3 (11-174)||(30149074-30149237)
chr3 (11-174)||(13965612-13965775)
chr3 (11-167)||(15948730-15948886)
chr3 (11-174)||(6151113-6151276)
chr3 (11-174)||(25768035-25768198)
[»] scaffold0225 (1 HSPs)
scaffold0225 (11-174)||(25513-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-174)||(15027-15190)
scaffold0162 (11-174)||(11198-11361)
[»] chr8 (10 HSPs)
chr8 (11-174)||(16875559-16875722)
chr8 (11-174)||(21848801-21848964)
chr8 (11-174)||(22436457-22436620)
chr8 (11-169)||(20650819-20650977)
chr8 (11-174)||(23155506-23155667)
chr8 (28-169)||(23902323-23902464)
chr8 (11-174)||(21195004-21195166)
chr8 (37-117)||(16414302-16414382)
chr8 (27-155)||(19869866-19869994)
chr8 (54-142)||(24631173-24631261)
[»] chr7 (12 HSPs)
chr7 (11-174)||(7825977-7826140)
chr7 (11-174)||(27105804-27105967)
chr7 (11-174)||(27172358-27172521)
chr7 (11-174)||(17925727-17925890)
chr7 (11-167)||(13378969-13379123)
chr7 (11-174)||(4442005-4442168)
chr7 (11-174)||(13458112-13458275)
chr7 (25-166)||(15716947-15717088)
chr7 (25-164)||(17143320-17143459)
chr7 (25-155)||(39190-39320)
chr7 (107-164)||(12204904-12204961)
chr7 (107-164)||(14262349-14262406)
[»] chr5 (4 HSPs)
chr5 (11-174)||(23507686-23507849)
chr5 (11-174)||(24583212-24583375)
chr5 (11-174)||(21935391-21935554)
chr5 (49-164)||(20250525-20250640)
[»] chr1 (7 HSPs)
chr1 (11-174)||(20829485-20829648)
chr1 (11-174)||(20927157-20927320)
chr1 (11-174)||(20527156-20527319)
chr1 (11-169)||(41215949-41216107)
chr1 (33-162)||(21200994-21201123)
chr1 (19-125)||(22133857-22133963)
chr1 (11-80)||(35930918-35930987)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-174)||(42377-42540)
[»] chr2 (7 HSPs)
chr2 (11-174)||(24829749-24829912)
chr2 (38-174)||(22279824-22279960)
chr2 (11-167)||(25130335-25130491)
chr2 (11-174)||(24568229-24568392)
chr2 (11-174)||(22760130-22760293)
chr2 (25-164)||(10037907-10038046)
chr2 (25-164)||(10098292-10098431)
[»] scaffold0302 (2 HSPs)
scaffold0302 (11-174)||(7272-7435)
scaffold0302 (11-174)||(330-493)
[»] chr4 (3 HSPs)
chr4 (11-166)||(15291179-15291334)
chr4 (36-174)||(12340911-12341049)
chr4 (107-164)||(15323315-15323372)
[»] scaffold0266 (1 HSPs)
scaffold0266 (11-169)||(7885-8043)
[»] scaffold0218 (2 HSPs)
scaffold0218 (11-166)||(1976-2131)
scaffold0218 (15-174)||(26446-26605)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-174)||(26290-26453)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-174)||(8850-9013)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-174)||(5830-5995)
[»] scaffold1488 (1 HSPs)
scaffold1488 (11-166)||(827-982)
[»] scaffold0170 (1 HSPs)
scaffold0170 (11-174)||(34204-34367)
[»] scaffold0120 (1 HSPs)
scaffold0120 (11-174)||(24295-24458)
[»] scaffold0610 (1 HSPs)
scaffold0610 (11-169)||(6953-7111)
[»] scaffold0561 (1 HSPs)
scaffold0561 (11-174)||(7029-7192)
[»] scaffold0692 (1 HSPs)
scaffold0692 (11-174)||(1908-2071)
[»] scaffold0467 (1 HSPs)
scaffold0467 (11-174)||(1645-1808)
[»] scaffold0008 (2 HSPs)
scaffold0008 (11-174)||(132513-132676)
scaffold0008 (11-122)||(25938-26049)
[»] scaffold0876 (1 HSPs)
scaffold0876 (11-169)||(970-1128)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-149)||(6888-7026)
[»] scaffold0387 (1 HSPs)
scaffold0387 (11-174)||(16177-16340)
[»] scaffold0021 (3 HSPs)
scaffold0021 (11-174)||(21871-22034)
scaffold0021 (11-174)||(31447-31610)
scaffold0021 (69-174)||(7333-7438)
[»] scaffold0092 (1 HSPs)
scaffold0092 (25-162)||(238-375)
[»] scaffold0462 (1 HSPs)
scaffold0462 (11-115)||(2117-2221)
[»] scaffold0635 (1 HSPs)
scaffold0635 (34-164)||(9024-9154)
[»] scaffold0719 (1 HSPs)
scaffold0719 (37-95)||(4785-4843)
[»] scaffold0465 (1 HSPs)
scaffold0465 (11-69)||(13649-13707)
[»] scaffold0058 (1 HSPs)
scaffold0058 (28-86)||(76630-76688)
[»] scaffold0827 (1 HSPs)
scaffold0827 (67-140)||(5259-5332)
[»] scaffold0730 (1 HSPs)
scaffold0730 (107-164)||(121-178)
[»] scaffold0585 (1 HSPs)
scaffold0585 (107-164)||(5209-5266)
[»] scaffold0029 (1 HSPs)
scaffold0029 (107-164)||(114688-114745)
[»] scaffold0026 (1 HSPs)
scaffold0026 (107-164)||(50939-50996)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 1646980 - 1647143
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 1647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 23998363 - 23998200
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23998200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 16380539 - 16380702
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16380702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 16648135 - 16648298
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16648298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 14130584 - 14130421
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    || || ||||||||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtg 14130421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 16100130 - 16099961
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||  ||||||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  111 tgcgccaggtgtct------ttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    || |||||||||||      ||||||| || |||||||||||||||||||| ||| ||||||||| ||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtg 16099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 106  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 14643667 - 14643803
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| |||||||||| ||||| ||||| |||||||| || ||||||||||  || |||||||||||||||||||| ||  || ||||||  |||||||    
T  14643667 gtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtgtct 14643763  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    | |||||||| ||||||||||| || ||||||||| ||||    
T  14643764 tcatggaatatatgaatagaatcttccatccttatttgga 14643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 15611983 - 15611820
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 15611820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 8272659 - 8272822
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 8272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 30139686 - 30139523
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 30149237 - 30149074
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 13965612 - 13965775
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 13965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 15948730 - 15948886
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccg 167  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccg 15948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 6151113 - 6151276
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||    
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtg 6151276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 25768198 - 25768035
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||| || || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 25768035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 25676 - 25513
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 25513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 15190 - 15027
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 11198 - 11361
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 16875559 - 16875722
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16875722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 21848801 - 21848964
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21848964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 22436620 - 22436457
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtg 22436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 20650819 - 20650977
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgtt 169  Q
    ||||||||||||||| || || || ||||||||||||||| ||||||||||||||||||    
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgtt 20650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 23155506 - 23155667
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtg 23155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 23902464 - 23902323
Alignment:
Q  28 aaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttta 127  Q
    |||| ||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  128 tggaataaatgaatagaatatttcatccttatctggaccgtt 169  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgtt 23902323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 21195004 - 21195166
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| | ||| ||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    || |||||||  ||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21195104 tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 21195166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 16414382 - 16414302
Alignment:
Q  37 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 117  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16414382 gatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 19869994 - 19869866
Alignment:
Q  27 gaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttt 126  Q
    |||| |||| |||||||| || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||    
T  19869994 gaagtcggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgttt 19869895  T
Q  127 atggaataaatgaatagaatatttcatcc 155  Q
    ||||| || ||||| ||||| || |||||    
T  19869894 atggagtatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 24631173 - 24631261
Alignment:
Q  54 gttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaata 142  Q
    |||| |||| |||||| | ||||||||||||||||| ||| ||||||| ||  |||||| || |||  | ||||||||||| |||||||    
T  24631173 gttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaata 24631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 7826140 - 7825977
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 27105804 - 27105967
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 27172521 - 27172358
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 17925890 - 17925727
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtg 17925727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccg 167  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 4442168 - 4442005
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||||||  ||||||||| |||||| |||||||||||||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| ||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtg 4442005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 13458275 - 13458112
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||| ||||||| ||||||||| | ||||||||| |||| | ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||| || ||| |||| ||||    
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtg 13458112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 15716947 - 15717088
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||  || |||||| |||  ||||||    
T  15716947 gtgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtct 15717046  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    | |||||||| |||||||||||||| ||||||| ||||||||    
T  15717047 tcatggaatatatgaatagaatattccatccttttctggacc 15717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 17143320 - 17143459
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    ||||||||| |||| ||||| || ||||| ||  |||||||||||||||||||||| ||||||| |||| ||||||| ||  ||||| |||| |||||||    
T  17143320 gtgaaggcgaaggacatatctaagactgcattttgaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtct 17143419  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    | |||||||| ||||||||||| || ||||||||| ||||    
T  17143420 tcatggaatatatgaatagaatcttccatccttatttgga 17143459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 39190 - 39320
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| |||| |||||||  || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |    
T  39190 gtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagttt 39289  T
Q  125 ttatggaataaatgaatagaatatttcatcc 155  Q
    ||||||| || ||||| ||||| || |||||    
T  39290 ttatggagtatatgaacagaattttccatcc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 12204904 - 12204961
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctgga 12204961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 14262349 - 14262406
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctgga 14262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 23507849 - 23507686
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 24583375 - 24583212
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24583212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 21935391 - 21935554
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 20250525 - 20250640
Alignment:
Q  49 actgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatat 148  Q
    |||||||| ||||| ||||||||||| |||||||||| | | ||||||||||| ||| |||| | | |||||  |||||||||||| |||||||| || |    
T  20250525 actgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattt 20250624  T
Q  149 ttcatccttatctgga 164  Q
    | ||||||||| ||||    
T  20250625 tccatccttatttgga 20250640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 20829485 - 20829648
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 20829648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 20927320 - 20927157
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtg 20927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 20527319 - 20527156
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||| |||||| |||||||| || |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtg 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 41215949 - 41216107
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||| | | |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgtt 169  Q
    |||||||||||| || ||| |||| |||||||||||||||||||||| |||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgtt 41216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 21200994 - 21201123
Alignment:
Q  33 ggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaa 132  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||  ||||||| ||||||    
T  21200994 ggaggatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaa 21201093  T
Q  133 taaatgaatagaatatttcatccttatctg 162  Q
    || |||||||||||||||||||||||||||    
T  21201094 tatatgaatagaatatttcatccttatctg 21201123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  19 attagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 118  Q
    ||||| || |||||||| ||||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  119 gtgtctt 125  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatga 80  Q
    ||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 42540 - 42377
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 42377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 24829749 - 24829912
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 22279960 - 22279824
Alignment:
Q  38 atatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaat 137  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  22279960 atatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacat 22279861  T
Q  138 gaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  22279860 gaatagaatattttatccttatctggaccgttttgtg 22279824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 25130491 - 25130335
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccg 167  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||  ||||||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccg 25130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 24568229 - 24568392
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| ||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||  |||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24568392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 22760130 - 22760293
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| |||||||||||||| | ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||| ||||||||| ||||| || ||||||||||||||||||||||| |||||||||| ||||    
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtg 22760293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 10037907 - 10038046
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| | |||||||| | ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||    
T  10037907 gtgaagacagaggatattttcaaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtct 10038006  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    | |||||||| ||||||||||| || ||||||||| ||||    
T  10038007 tcatggaatacatgaatagaatcttccatccttatttgga 10038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 10098292 - 10098431
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| | |||||||| | ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||    
T  10098292 gtgaagacagaggatattttcaaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtct 10098391  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    | |||||||| ||||||||||| || ||||||||| ||||    
T  10098392 tcatggaatacatgaatagaatcttccatccttatttgga 10098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 7435 - 7272
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 493 - 330
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||| |||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 15291179 - 15291334
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggacc 15291334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 12340911 - 12341049
Alignment:
Q  36 ggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataa 135  Q
    ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||     
T  12340911 ggatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatat 12341010  T
Q  136 atgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||| ||||| ||||||| ||||||| ||| ||||    
T  12341011 atgaataggatattccatccttttctggactgttttgtg 12341049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 15323372 - 15323315
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| ||||||||||| ||||||||||| || ||| ||||||||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctgga 15323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 7885 - 8043
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgtt 169  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 1976 - 2131
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 26605 - 26446
Alignment:
Q  15 tcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcg 114  Q
    |||||| || ||||||||||| ||||||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  115 ccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 26290 - 26453
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtg 26453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 8850 - 9013
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||||||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||    
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtg 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 5830 - 5995
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  111 tgcgccaggtgtcttta-tggaataaatgaat-agaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||||| || |||| |||||| |||||||||||||||||||||||||||| ||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtg 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 827 - 982
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||| ||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggacc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 34367 - 34204
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 34204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 24458 - 24295
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||||| |||||||||| |||| || |||||||||||||||||||||||||||||||||| ||||    
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 6953 - 7111
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgtt 169  Q
    ||| ||||||||||| || || || ||||||| ||||||||||||||||||||||||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgtt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 7029 - 7192
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtg 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 1908 - 2071
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| ||| ||||    
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtg 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 1645 - 1808
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| |||||||| || ||| |||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 1808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 132513 - 132676
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtg 132676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||| |||||| ||||||||||| |||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  ||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  111 tgcgccaggtgt 122  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 970 - 1128
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||| | |||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgtt 169  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgtt 1128  T

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Target: scaffold0369 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatt 149  Q
    ||| |||||||||||||||||||| ||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

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Target: scaffold0387 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 16340 - 16177
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| |||||  |||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    |||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtg 16177  T

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Target: scaffold0021 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 21871 - 22034
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 22034  T

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Target: scaffold0021; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 31447 - 31610
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttctgtg 174  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 31610  T

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Target: scaffold0021; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 7438 - 7333
Alignment:
Q  69 tggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  169 tctgtg 174  Q
    | ||||    
T  7338 tttgtg 7333  T

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Target: scaffold0092 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 375 - 238
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||||||||  ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  375 gtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 276  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctg 162  Q
    | || || || |||||||||||||||||||||||||||    
T  275 tcatagagtatatgaatagaatatttcatccttatctg 238  T

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Target: scaffold0462 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  111 tgcgc 115  Q
    |||||    
T  2121 tgcgc 2117  T

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Target: scaffold0635 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 9154 - 9024
Alignment:
Q  34 gaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaat 133  Q
    |||||||| | ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| |||||||    
T  9154 gaggatattttcaaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaat 9055  T
Q  134 aaatgaatagaatatttcatccttatctgga 164  Q
    | ||||||||||| || ||||||||| ||||    
T  9054 acatgaatagaatcttccatccttatttgga 9024  T

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Target: scaffold0719 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 4843 - 4785
Alignment:
Q  37 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgcc 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  4843 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

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Target: scaffold0465 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtat 69  Q
    ||||||||||||  ||||||||  | |||||||||||||| ||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 76688 - 76630
Alignment:
Q  28 aaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattc 86  Q
    ||||||||| |||||||||||||||| ||||| || || |||||||||| ||| |||||    
T  76688 aaggcggagtatatatccaaaactgcattccggactagatatggacactttgaatattc 76630  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaa 140  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

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Target: scaffold0730 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 121 - 178
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||||||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctgga 178  T

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Target: scaffold0585 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 5209 - 5266
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctgga 5266  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 114745 - 114688
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| |||| |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctgga 114688  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 50996 - 50939
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| ||||| |||||||| || ||||||||||| |||||| | ||||||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctgga 50939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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