View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0954_low_38 (Length: 213)
Name: NF0954_low_38
Description: NF0954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0954_low_38 |
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Alignment Details
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 6693202 - 6693342
Alignment:
| Q |
1 |
agaattacaccaaacactcacttttaaagaaattttgaatattcttaactgttagtattggagcatcctatctctacaaaagagggcggaaaaagaagtc |
100 |
Q |
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| T |
6693202 |
agaattacaccaaacactcacttttaaagaaattttgaatattcttaactgttagtattggagcatcctatctctacaaaagagggcggaaaaagaagtc |
6693301 |
T |
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| Q |
101 |
gaaaaaactatacctcagtcctggccatctctgctgctcca |
141 |
Q |
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| T |
6693302 |
gaaaaaactatacctcagtcctggccatctctggtgctcca |
6693342 |
T |
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