View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0955_low_1 (Length: 502)
Name: NF0955_low_1
Description: NF0955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0955_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 66 - 455
Target Start/End: Complemental strand, 28030785 - 28030396
Alignment:
| Q |
66 |
aaaatatcccctacttgcactttcaactcccaaaattacaaggtggactagctgcttaatgctctcaaggaactggacctcataatatatgattgattgg |
165 |
Q |
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| T |
28030785 |
aaaatatcccctacttacactttcaactcccaaaattacaaggtggactagctgcttaatgctctcaaggaactggacctcataatatatgattgattag |
28030686 |
T |
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| Q |
166 |
ttgaataatttagtttgttgaataatcactcataatatatggttgcccaaagttactgtatctgttttacgatttctctagattaccatatatgcataat |
265 |
Q |
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| T |
28030685 |
ttgcataatttagtttgttgaataatcactcataatatatggttgcccaaagttactgtatctgttttacgatttctctagactacctaccatgcataat |
28030586 |
T |
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| Q |
266 |
aaatggttgcttagttgaataatttagttagttttgctaataattggcacttgccatcataaaaaataaattaataattgtcagttggataattttactt |
365 |
Q |
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| T |
28030585 |
aaatggttgcttagttgaataatttagttagttttgctaataattggcacttgccatcataaaaaataaattaataattggcacttggataattttactt |
28030486 |
T |
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| Q |
366 |
ctttctatgggagaagcttaaccggatattcattttatttatcacaagtttgtgagactcaaatttcttttgttatttttcaaagaataa |
455 |
Q |
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| T |
28030485 |
ctttctatgggagaagcttaaccggatattcattttatttatcacaagtttgtgagactcaaatttcttttgttatttttcaaagaataa |
28030396 |
T |
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