View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0956_high_11 (Length: 264)
Name: NF0956_high_11
Description: NF0956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0956_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 56357634 - 56357822
Alignment:
| Q |
33 |
gaatattaaccattttcttaatggaaaaatagctcaaaacctgaggagtggcttgaatgtttgaagcagctcctccaatctcaatgtttctaaagacacc |
132 |
Q |
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| T |
56357634 |
gaatattaaccattttcttaatggaaaaatagctcaaaacctgaggagtggcttgaatgtttgaagcagctcctccaatctcaatgtttctaaagacacc |
56357733 |
T |
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| Q |
133 |
tgtttcagggttgaaagagacaagacactttgtaaaggaacgagaatcagaatcagctgtgacccacatttctccagaagtgttgaatc |
221 |
Q |
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| T |
56357734 |
tgtttcagggttgaaagagacaagacactttgtaaaggaacgagaatcagaatcagctgtgacccacatttctccagaagtgttgaatc |
56357822 |
T |
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