View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0956_low_10 (Length: 412)

Name: NF0956_low_10
Description: NF0956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0956_low_10
NF0956_low_10
[»] chr5 (16 HSPs)
chr5 (24-207)||(10152274-10152457)
chr5 (202-383)||(10152611-10152776)
chr5 (141-201)||(6109540-6109600)
chr5 (141-200)||(11700332-11700391)
chr5 (141-191)||(11457155-11457205)
chr5 (141-201)||(32172710-32172770)
chr5 (141-200)||(38047833-38047892)
chr5 (141-201)||(25079521-25079580)
chr5 (141-201)||(25137490-25137549)
chr5 (153-185)||(34205310-34205342)
chr5 (141-177)||(40499703-40499739)
chr5 (141-200)||(30515118-30515177)
chr5 (141-200)||(30555458-30555517)
chr5 (141-174)||(5531091-5531124)
chr5 (141-201)||(35960470-35960529)
chr5 (141-181)||(38338380-38338420)
[»] chr3 (13 HSPs)
chr3 (135-201)||(39311632-39311698)
chr3 (141-201)||(37273191-37273251)
chr3 (141-190)||(49772632-49772681)
chr3 (143-201)||(1810036-1810094)
chr3 (142-204)||(26603251-26603313)
chr3 (141-201)||(36646335-36646395)
chr3 (148-205)||(27294410-27294467)
chr3 (154-191)||(45535183-45535220)
chr3 (152-185)||(49845509-49845542)
chr3 (141-189)||(21574547-21574595)
chr3 (141-201)||(41452580-41452640)
chr3 (141-201)||(43115113-43115173)
chr3 (149-201)||(49254824-49254876)
[»] chr4 (12 HSPs)
chr4 (141-190)||(7730657-7730706)
chr4 (140-191)||(6987704-6987755)
chr4 (141-201)||(2996630-2996690)
chr4 (141-184)||(21953005-21953048)
chr4 (146-201)||(27123305-27123360)
chr4 (141-204)||(41097206-41097269)
chr4 (141-191)||(20656094-20656144)
chr4 (152-201)||(18628506-18628555)
chr4 (141-190)||(19429476-19429525)
chr4 (140-201)||(35507068-35507129)
chr4 (143-175)||(18630721-18630753)
chr4 (140-176)||(27725270-27725306)
[»] chr6 (17 HSPs)
chr6 (141-200)||(32917254-32917313)
chr6 (140-200)||(24631866-24631926)
chr6 (141-207)||(1669745-1669811)
chr6 (138-191)||(34939798-34939851)
chr6 (141-189)||(6310215-6310263)
chr6 (145-185)||(10616510-10616550)
chr6 (144-184)||(34404600-34404640)
chr6 (146-201)||(2460104-2460159)
chr6 (138-201)||(2732200-2732263)
chr6 (118-201)||(3181022-3181105)
chr6 (140-201)||(2455866-2455927)
chr6 (140-188)||(2027764-2027812)
chr6 (143-191)||(3289365-3289413)
chr6 (147-199)||(19752761-19752813)
chr6 (141-185)||(20377889-20377933)
chr6 (141-201)||(27595520-27595580)
chr6 (141-201)||(27693392-27693452)
[»] chr2 (13 HSPs)
chr2 (152-191)||(14316108-14316147)
chr2 (141-189)||(1741997-1742045)
chr2 (141-201)||(28803483-28803543)
chr2 (141-206)||(7283053-7283118)
chr2 (117-176)||(43065428-43065487)
chr2 (141-175)||(9878661-9878695)
chr2 (144-201)||(1318296-1318353)
chr2 (141-186)||(4550804-4550849)
chr2 (154-191)||(19629431-19629468)
chr2 (154-191)||(19826332-19826369)
chr2 (152-201)||(22878166-22878215)
chr2 (141-201)||(8017491-8017551)
chr2 (152-200)||(29429711-29429759)
[»] chr1 (19 HSPs)
chr1 (138-197)||(45327634-45327693)
chr1 (140-201)||(1662629-1662690)
chr1 (141-194)||(29007676-29007729)
chr1 (144-200)||(23373267-23373323)
chr1 (141-201)||(32515394-32515454)
chr1 (141-184)||(6262795-6262838)
chr1 (116-187)||(15579514-15579585)
chr1 (138-201)||(17420257-17420320)
chr1 (141-176)||(17631080-17631115)
chr1 (141-191)||(10439743-10439793)
chr1 (155-201)||(16980874-16980920)
chr1 (153-198)||(172775-172820)
chr1 (140-189)||(4549506-4549555)
chr1 (141-174)||(17628656-17628689)
chr1 (143-176)||(38867809-38867842)
chr1 (141-201)||(15581311-15581371)
chr1 (141-181)||(19412570-19412610)
chr1 (141-201)||(30418135-30418195)
chr1 (152-200)||(51730553-51730601)
[»] chr7 (13 HSPs)
chr7 (143-205)||(28844549-28844611)
chr7 (141-191)||(4966213-4966263)
chr7 (135-175)||(5939136-5939176)
chr7 (141-191)||(29574588-29574638)
chr7 (147-201)||(30535626-30535680)
chr7 (99-201)||(33894642-33894744)
chr7 (141-191)||(48157083-48157133)
chr7 (160-201)||(1431946-1431987)
chr7 (134-175)||(44989908-44989949)
chr7 (141-201)||(20553160-20553220)
chr7 (153-201)||(22387849-22387897)
chr7 (141-177)||(28340397-28340433)
chr7 (143-175)||(44686989-44687021)
[»] chr8 (15 HSPs)
chr8 (147-201)||(30191094-30191148)
chr8 (141-194)||(40071806-40071859)
chr8 (149-201)||(24326096-24326148)
chr8 (141-176)||(30987969-30988004)
chr8 (141-191)||(14949923-14949973)
chr8 (144-201)||(13000377-13000434)
chr8 (141-201)||(7918399-7918459)
chr8 (143-191)||(8558719-8558767)
chr8 (141-177)||(9540973-9541009)
chr8 (141-201)||(11569410-11569470)
chr8 (135-191)||(26479836-26479892)
chr8 (153-201)||(26499785-26499833)
chr8 (141-185)||(30259171-30259215)
chr8 (141-173)||(31875576-31875608)
chr8 (141-177)||(37740404-37740440)
[»] scaffold0141 (1 HSPs)
scaffold0141 (141-191)||(9741-9791)


Alignment Details
Target: chr5 (Bit Score: 143; Significance: 5e-75; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 10152274 - 10152457
Alignment:
Q  24 ttaacatatatgtgacagtgtataagttgtttcattcacaagagataaaatcaaattgnnnnnnngcacaagctataagttatcctagacaatttattga 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  10152274 ttaacatatatgtgacagtgtataagttgtttcattcacaagagataaaatcaaattgtttttttgcacaagctataagttatcctagacaatttattga 10152373  T
Q  124 aataaggcgggaaaaatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgacaaaa 207  Q
    ||||| |||| ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10152374 aataaagcggaaaaaacttatggacatgtcataagttgttttcataagctctccaaaatagtctcacatgtgcttatgacaaaa 10152457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 202 - 383
Target Start/End: Original strand, 10152611 - 10152776
Alignment:
Q  202 acaaaatcaagggtcataattcataaccaacaacaaccataatcacatgagactgacagttatgatctgatggttatgattgattgattgacagtgtnnn 301  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||              ||||||||||||||  |       
T  10152611 acaatatcaagggtcataattcataaccaacaacaaccttaatcacatgagactgacagttatgat--------------tgattgattgacagcataaa 10152696  T
Q  302 nnnnnctctttacaccgctttttacatcgagggtgtatatgaattaaatcctaaacctaaataaattaaatgataaactgaa 383  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10152697 aaa--ctctttacaccgctttttacatcgagggtgtatatgaattaaatcctaaacctaaatcaattaaatgataaactgaa 10152776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 6109540 - 6109600
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||| ||| |||||    
T  6109540 ttatggacatatcataatttttttccataagctctccaaaatattctcacaagtgtttatg 6109600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 11700391 - 11700332
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||||||||| ||||||||||||||||||| ||||||  |||||||||||| ||||||||    
T  11700391 ttatggacatgtcataagttgtttccataaactctcctcaatagtctcacaagtgcttat 11700332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 11457155 - 11457205
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  11457155 ttatggacatgtcataagttgtttccataagctcttcaaaacagtctcaca 11457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 32172710 - 32172770
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| |||||||||||||||||||||||||| |||   ||||||| |||||||||    
T  32172710 ttatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatg 32172770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 38047892 - 38047833
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||| |||| || |||||    
T  38047892 ttatggacatgtcataagttgtttccataagctctcccaaacagtcacacaagtacttat 38047833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 25079580 - 25079521
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||| ||||| |||||||||||||| |||| |||||| ||||||||||||| |||||||||    
T  25079580 ttatagacatgtcataagttgtttcgataaactctcc-aaatagtctcacaagtgcttatg 25079521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 25137549 - 25137490
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||| ||||| |||||||||||||| |||| |||||| ||||||||||||| |||||||||    
T  25137549 ttatagacatgtcataagttgtttcgataaactctcc-aaatagtctcacaagtgcttatg 25137490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 34205310 - 34205342
Alignment:
Q  153 cataagttgtttccataagctctccaaaatagt 185  Q
    |||||||||||||||||||||||||||||||||    
T  34205310 cataagttgtttccataagctctccaaaatagt 34205342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 40499739 - 40499703
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctcc 177  Q
    |||||||||| ||||||||||||||||||||||||||    
T  40499739 ttatggacatgtcataagttgtttccataagctctcc 40499703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 30515177 - 30515118
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||||||||| | ||||| |||||||||||||||||| ||||| ||||||| || |||||    
T  30515177 ttatggacatgtaataagatgtttccataagctctccgaaataatctcacaagtacttat 30515118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 30555517 - 30555458
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||||||||| | ||||| |||||||||||||||||| ||||| ||||||| || |||||    
T  30555517 ttatggacatgtaataagatgtttccataagctctccgaaataatctcacaagtacttat 30555458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 5531091 - 5531124
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctc 174  Q
    |||||||||||||||||||||||| |||||||||    
T  5531091 ttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 35960470 - 35960529
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| || ||||||| ||||||||||||||  ||||||||| |||| ||||||||    
T  35960470 ttatggacatgtcgtaagttgcttccataagctctctcaaatagtctgacat-tgcttatg 35960529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 38338380 - 38338420
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaa 181  Q
    |||||||||| ||||||| ||||||| ||||||||||||||    
T  38338380 ttatggacatgtcataagctgtttccgtaagctctccaaaa 38338420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 39311698 - 39311632
Alignment:
Q  135 aaaaatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||| |||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  39311698 aaaaatttgtggaaatatcataaactgtttccataagctctccaaaatagtctcacaagtgcttatg 39311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 37273191 - 37273251
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||  |||||||||    
T  37273191 ttatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatg 37273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 49772681 - 49772632
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcac 190  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||    
T  49772681 ttatggacatctcataagttgtttccataagctctcctaaacagtctcac 49772632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 1810036 - 1810094
Alignment:
Q  143 atggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||| ||||||||||||||| |||||||||  ||||||||||||| ||| |||||    
T  1810036 atggacatgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattatg 1810094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 26603251 - 26603313
Alignment:
Q  142 tatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgaca 204  Q
    ||||||||| ||||||||||||||||| |||||  | ||| | ||||||||||||||||||||    
T  26603251 tatggacatgtcataagttgtttccatgagctccaccaaacaatctcacatgtgcttatgaca 26603313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 36646395 - 36646335
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||||| ||| |||| ||||    
T  36646395 ttatggacatgccataagtggtttccataagctctcccaaatagtcttacaagtgcctatg 36646335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 27294410 - 27294467
Alignment:
Q  148 catatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgacaa 205  Q
    |||||||| ||||||||| || |||||||  ||| ||||||||| |||||||||||||    
T  27294410 catatcatgagttgtttctatgagctctctcaaacagtctcacaagtgcttatgacaa 27294467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 45535220 - 45535183
Alignment:
Q  154 ataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  45535220 ataagttgtttccataagttctcccaaatagtctcaca 45535183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 49845542 - 49845509
Alignment:
Q  152 tcataagttgtttccataagctctccaaaatagt 185  Q
    |||||||||||||||||||||||||| |||||||    
T  49845542 tcataagttgtttccataagctctcccaaatagt 49845509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 21574547 - 21574595
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctca 189  Q
    ||||| |||| ||||||||||||| |||||||||||| ||| |||||||    
T  21574547 ttatgaacatgtcataagttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 41452580 - 41452640
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||| |||||||||||||||||||| ||||| ||||  ||||| ||||||| || ||||||    
T  41452580 ttatagacatatcataagttgtttctataaggtctctcaaatactctcacaagtacttatg 41452640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 43115113 - 43115173
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| ||||||||||||||||||| |||| | ||| | ||||||| ||| |||||    
T  43115113 ttatggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatg 43115173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 49254824 - 49254876
Alignment:
Q  149 atatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||| ||||||| |||||| ||||  ||||||||| |||||||||||||    
T  49254824 atatcatatgttgttttcataaggtctcacaaatagtctgacatgtgcttatg 49254876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 7730657 - 7730706
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcac 190  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7730657 ttatggacatgtcataagttgtttccttaagctctccaaaatagtctcac 7730706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 6987755 - 6987704
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  6987755 tttatggacatgtcataagttgtatccataagctctcccaaacagtctcaca 6987704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 2996630 - 2996690
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| ||||||||||||| |||||||||||  ||| ||||||| | |||||||||    
T  2996630 ttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatg 2996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 21953005 - 21953048
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatag 184  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||    
T  21953005 ttatggacatgtcataagttctttccataagctctcccaaatag 21953048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 27123360 - 27123305
Alignment:
Q  146 gacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||||| || ||||||    
T  27123360 gacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatg 27123305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 41097269 - 41097206
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgaca 204  Q
    |||||||||| |||| ||||||||| |||||||||||  || ||||||||| |||||| |||||    
T  41097269 ttatggacatgtcattagttgtttctataagctctcccgaacagtctcacaagtgcttttgaca 41097206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 20656094 - 20656144
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||| |||||||||||| ||| ||||||| | |||||||||||||    
T  20656094 ttatggacatgtcataagttgttgccagaagctctactaaatagtctcaca 20656144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 18628555 - 18628506
Alignment:
Q  152 tcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||||| |||||||||||| ||| ||||||||| ||| |||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatg 18628506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 19429525 - 19429476
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcac 190  Q
    |||||||||| ||||||||| | |||||||||||||| ||| ||||||||    
T  19429525 ttatggacatgtcataagttttctccataagctctcccaaacagtctcac 19429476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 35507129 - 35507068
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||| ||||||   |||||| |||||||||| | |||| ||||||||||||||||    
T  35507129 tttatggacatgtcataaaccgtttccgtaagctctcccagataggctcacatgtgcttatg 35507068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 18630721 - 18630753
Alignment:
Q  143 atggacatatcataagttgtttccataagctct 175  Q
    |||| ||||||||||||||||||||||||||||    
T  18630721 atgggcatatcataagttgtttccataagctct 18630753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 27725270 - 27725306
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctc 176  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  27725270 tttatggacatgtcataagttatttccataagctctc 27725306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 32917254 - 32917313
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||| ||||    
T  32917254 ttatggacatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttat 32917313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 24631926 - 24631866
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||||||||||||||| |||||||||||||| |||| | ||||||| ||||| ||||||||    
T  24631926 tttatggacatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 24631866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 1669811 - 1669745
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgacaaaa 207  Q
    |||| ||||| ||||||||||||| |||||||||||| || |||||| ||| |||| ||||||||||    
T  1669811 ttatagacatgtcataagttgttttcataagctctcccaattagtcttacaagtgcatatgacaaaa 1669745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 34939798 - 34939851
Alignment:
Q  138 aatttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||| ||| |||||    
T  34939798 aatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcaca 34939851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 6310263 - 6310215
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctca 189  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  6310263 ttatagacatgtcataagttgttttcataagctctccaaaatagcctca 6310215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 10616550 - 10616510
Alignment:
Q  145 ggacatatcataagttgtttccataagctctccaaaatagt 185  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  10616550 ggacatgtcataagttgtttccataagctctcccaaatagt 10616510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 34404600 - 34404640
Alignment:
Q  144 tggacatatcataagttgtttccataagctctccaaaatag 184  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  34404600 tggacatgtcataagttgtttccataagctctcccaaatag 34404640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 2460159 - 2460104
Alignment:
Q  146 gacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||||| || ||||||    
T  2460159 gacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatg 2460104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 2732263 - 2732200
Alignment:
Q  138 aatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||||| ||||| || |||||||||||||| | | ||| ||||||||| |||||||||    
T  2732263 aatttatggacagatcattagctgtttccataagcttttccaaacagtctcacaagtgcttatg 2732200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 3181105 - 3181022
Alignment:
Q  118 tattgaaataaggcgggaaaaatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||||| ||| || || ||||  |||| ||||||||||||| ||| ||||||   ||||||||||||| |||||||||    
T  3181105 tattgaaataagccggaaataacttataaacatttcataagttgtttacattagctctttcaaatagtctcacaagtgcttatg 3181022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 2455866 - 2455927
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||| ||| |||||||||||||||||||||||| | ||| | |||| || |||||||||    
T  2455866 tttatgggcatgtcataagttgtttccataagctcttctaaacaatctcgcaagtgcttatg 2455927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 2027812 - 2027764
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctc 188  Q
    ||||| ||||| |||||||||||||| ||||||||||| ||| ||||||    
T  2027812 tttattgacatgtcataagttgtttctataagctctcccaaacagtctc 2027764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 3289365 - 3289413
Alignment:
Q  143 atggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||||||| | | |||| |||||||||||||||| ||||||||    
T  3289365 atggacatatcataggctatttctataagctctccaaaatcgtctcaca 3289413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 19752813 - 19752761
Alignment:
Q  147 acatatcataagttgtttccataagctctccaaaatagtctcacatgtgctta 199  Q
    |||||||||| |||||||  ||||||||||  ||||||||||||| |||||||    
T  19752813 acatatcatacgttgtttttataagctctctcaaatagtctcacaagtgctta 19752761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 20377933 - 20377889
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagt 185  Q
    |||| ||||| ||||||||||||| |||||||||||| |||||||    
T  20377933 ttatagacatgtcataagttgttttcataagctctcctaaatagt 20377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 27595580 - 27595520
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||| |||||||||||||||||||  ||||| ||| ||||||| | |||||||||    
T  27595580 ttatgaacatgtcataagttgtttccataaattctcccaaacagtctcataagtgcttatg 27595520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 27693452 - 27693392
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||| |||||||||||||||||||  ||||  ||||||||||||| || ||||||    
T  27693452 ttatgaacatgtcataagttgtttccataaattctctcaaatagtctcacaagtacttatg 27693392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 14316147 - 14316108
Alignment:
Q  152 tcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14316147 tcataagttgtttccataagctctccaaaatagtctcaca 14316108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 1742045 - 1741997
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctca 189  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  1742045 ttatgcacatgtcataagttgtttccataagctctcccaaatagtctca 1741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 28803543 - 28803483
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| |||||||||||||||||| | ||||  ||| |||||||||||||||||||    
T  28803543 ttatggacatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatg 28803483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 7283053 - 7283118
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgacaaa 206  Q
    ||||||||||||||||||||||||||| |||||   | ||||||||||||| ||| ||||| ||||    
T  7283053 ttatggacatatcataagttgtttccaaaagctaatccaaatagtctcacaagtgtttatgtcaaa 7283118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 43065487 - 43065428
Alignment:
Q  117 ttattgaaataaggcgggaaaaatttatggacatatcataagttgtttccataagctctc 176  Q
    |||||||||||||  |  || ||||||||||||| ||||||||||||| |||||||||||    
T  43065487 ttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 9878695 - 9878661
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctct 175  Q
    |||||||||| ||||||||||||||||||||||||    
T  9878695 ttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 1318296 - 1318353
Alignment:
Q  144 tggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||| ||||||| ||||| |||||||||||  ||| ||||||||| |||||||||    
T  1318296 tggacatgtcataagatgttttcataagctctcacaaacagtctcacaagtgcttatg 1318353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 4550804 - 4550849
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtc 186  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||    
T  4550804 ttatgaacatgtcataagttgtttccataagctctcccaaacagtc 4550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 19629431 - 19629468
Alignment:
Q  154 ataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  19629431 ataagttgtttccataagttctcccaaatagtctcaca 19629468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 19826332 - 19826369
Alignment:
Q  154 ataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  19826332 ataagttgtttccataagttctcccaaatagtctcaca 19826369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 22878166 - 22878215
Alignment:
Q  152 tcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||| ||||||||||||| ||||| ||| ||||||||| |||||||||    
T  22878166 tcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatg 22878215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 8017491 - 8017551
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||||||||||| ||||| |||||| ||||| ||||| || |||| |||||||||    
T  8017491 ttatgaacatatcataagctgttttcataagttctcccaaataatcgcacaagtgcttatg 8017551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 29429759 - 29429711
Alignment:
Q  152 tcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    |||| ||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  29429759 tcattagttgtttctataagctctcccaaacagtctcacaagtgcttat 29429711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 45327634 - 45327693
Alignment:
Q  138 aatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgct 197  Q
    ||||||||||||| ||||||||||||||||||||||| || || |||||||||| |||||    
T  45327634 aatttatggacatgtcataagttgtttccataagctcccccaactagtctcacaagtgct 45327693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 1662629 - 1662690
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||| ||||||||||||||| |||||||||  |||||||||| ||||| ||||||    
T  1662629 tttatggacatgtcataagttgtttccgtaagctctcgcaaatagtctcgcatgtacttatg 1662690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 29007729 - 29007676
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgt 194  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  29007729 ttatgaacatatcataaattgtttccaaaagctatccaaaacagtctcacatgt 29007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 23373323 - 23373267
Alignment:
Q  144 tggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    ||||||| |||||||||||||| ||||||||||| ||| | ||||||| ||||||||    
T  23373323 tggacatgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttat 23373267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 32515454 - 32515394
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||| ||||| ||||| | |||||||||||||||||| ||| ||||||||| |||||||||    
T  32515454 ttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttatg 32515394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 6262795 - 6262838
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatag 184  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||    
T  6262795 ttatggacatatcataagttattttcataagctctcccaaatag 6262838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 15579514 - 15579585
Alignment:
Q  116 tttattgaaataaggcgggaaaaatttatggacatatcataagttgtttccataagctctccaaaatagtct 187  Q
    ||||| ||||||||  | ||| || |||||||||| |||||||||||||||| ||||||||| ||| |||||    
T  15579514 tttatggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaacagtct 15579585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 17420257 - 17420320
Alignment:
Q  138 aatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||||| | ||||||||||| |||||||||| ||||| ||||| ||| ||| |||||    
T  17420257 aatttatggacatgtaataagttgttttcataagctcttcaaaacagtctaacaagtgtttatg 17420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 17631115 - 17631080
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctc 176  Q
    |||||||||| |||||||||||||||||||||||||    
T  17631115 ttatggacatgtcataagttgtttccataagctctc 17631080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 10439743 - 10439793
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||| |||||  |||||| |||||||||||| |||||||||||||    
T  10439743 ttatggacatgtcatagtttgttttcataagctctcccaaatagtctcaca 10439793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 16980874 - 16980920
Alignment:
Q  155 taagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||||||||||||||||||  ||||||||||||| || ||||||    
T  16980874 taagttgtttccataagctctctcaaatagtctcacaagtacttatg 16980920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 172820 - 172775
Alignment:
Q  153 cataagttgtttccataagctctccaaaatagtctcacatgtgctt 198  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||||    
T  172820 cataagttgtttccataagctctccaaaacaatttcacaagtgctt 172775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 4549555 - 4549506
Alignment:
Q  140 tttatggacatatcataagttgtttccataagctctccaaaatagtctca 189  Q
    ||||| ||||| |||||||||||||| ||||||||||| ||| |||||||    
T  4549555 tttatagacatgtcataagttgtttctataagctctcccaaacagtctca 4549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 17628656 - 17628689
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctc 174  Q
    |||||||||| |||||||||||||||||||||||    
T  17628656 ttatggacatgtcataagttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 38867842 - 38867809
Alignment:
Q  143 atggacatatcataagttgtttccataagctctc 176  Q
    |||||||||||||||||| |||||||||||||||    
T  38867842 atggacatatcataagttatttccataagctctc 38867809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 15581311 - 15581371
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||| ||||| ||||||||||||||||| |||||| | ||| | ||||||| |||||||||    
T  15581311 ttatagacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatg 15581371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 19412610 - 19412570
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaa 181  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  19412610 ttatggacatgtcataagttgtttccataaactctctaaaa 19412570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 30418195 - 30418135
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||| |||||||||||||||||||| ||| | ||||| || |||  |||||||||    
T  30418195 ttatggacatgtcataagttgtttccataaggtctaccaaatattcccactagtgcttatg 30418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 51730553 - 51730601
Alignment:
Q  152 tcataagttgtttccataagctctccaaaatagtctcacatgtgcttat 200  Q
    ||||||| ||||||||||||||||||| || ||||||||  ||||||||    
T  51730553 tcataaggtgtttccataagctctccacaacagtctcactagtgcttat 51730601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 28844549 - 28844611
Alignment:
Q  143 atggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatgacaa 205  Q
    |||||||| ||||||||||||| || ||||||||| ||| ||| |||||||||||||||||||    
T  28844549 atggacatgtcataagttgttttcagaagctctcctaaacagtatcacatgtgcttatgacaa 28844611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 4966213 - 4966263
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| |||||||||    
T  4966213 ttatggacatatcataagtggtttctataagctctcctaaacagtctcaca 4966263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 5939136 - 5939176
Alignment:
Q  135 aaaaatttatggacatatcataagttgtttccataagctct 175  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  5939136 aaaagtttatggacatatcatcagttgtttccataagctct 5939176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 29574638 - 29574588
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||||||    
T  29574638 ttatggacatgtcataagctgtttccataagttctccgaaacagtctcaca 29574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 30535626 - 30535680
Alignment:
Q  147 acatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||||||||||| |||||| ||||||||| |||||| || ||| |||||    
T  30535626 acatatcataagttgttttcataagttctccaaaacagtctctcaagtgtttatg 30535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 33894642 - 33894744
Alignment:
Q  99 taagttatcctagacaatttattgaaataaggcgggaaaaatttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgctt 198  Q
    |||| |||||| || | ||||||||||||||  |  || || |||||||||| ||||| | ||||| |||||||||||  ||| ||||||||| ||||||    
T  33894642 taagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgctt 33894741  T
Q  199 atg 201  Q
    |||    
T  33894742 atg 33894744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 48157133 - 48157083
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||||||||  ||||||||||||| ||||||||||| ||| |||||||||    
T  48157133 ttatggacatggcataagttgtttctataagctctcccaaacagtctcaca 48157083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 1431987 - 1431946
Alignment:
Q  160 tgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||||||||||| ||| ||||||||| |||||||||    
T  1431987 tgtttccataagctctcctaaacagtctcacaagtgcttatg 1431946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 44989949 - 44989908
Alignment:
Q  134 gaaaaatttatggacatatcataagttgtttccataagctct 175  Q
    ||||||||||||||||| ||||||| | ||||||||||||||    
T  44989949 gaaaaatttatggacatgtcataagctatttccataagctct 44989908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 20553160 - 20553220
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||| || |||| ||||||||||||||||||  || ||||||||| |||||||||    
T  20553160 ttatgaacatgtcgtaagctgtttccataagctctcctgaacagtctcacaagtgcttatg 20553220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 22387897 - 22387849
Alignment:
Q  153 cataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| |||||    
T  22387897 cataagttgttttcataagctctcccaaacagtctcacacgtgtttatg 22387849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 28340433 - 28340397
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctcc 177  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  28340433 ttatggacatgtcataagttgttttcataagctctcc 28340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 44686989 - 44687021
Alignment:
Q  143 atggacatatcataagttgtttccataagctct 175  Q
    |||||||| ||||||||||||||||||||||||    
T  44686989 atggacatgtcataagttgtttccataagctct 44687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 30191148 - 30191094
Alignment:
Q  147 acatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||| |||||||||||||||||||||||||| ||| ||||| ||| |||||||||    
T  30191148 acatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatg 30191094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 40071806 - 40071859
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgt 194  Q
    ||||| |||| |||||||||||||||||||||||||| ||| | ||||||||||    
T  40071806 ttatgaacatgtcataagttgtttccataagctctcccaaacactctcacatgt 40071859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 24326096 - 24326148
Alignment:
Q  149 atatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||||||  |||||||||||||||||| ||| ||||||||| |||||||||    
T  24326096 atatcataaactgtttccataagctctcccaaacagtctcacaagtgcttatg 24326148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 30988004 - 30987969
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctc 176  Q
    |||||||||| |||||||||||||||||||||||||    
T  30988004 ttatggacatgtcataagttgtttccataagctctc 30987969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 14949923 - 14949973
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||||| ||||||||| ||| |||||||||||| ||| |||||||||    
T  14949923 ttatggacatgtcataagttattttcataagctctcctaaacagtctcaca 14949973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 13000434 - 13000377
Alignment:
Q  144 tggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||||| |||||||||||| |||||| ||||   ||||||||||||| |||||||||    
T  13000434 tggacatgtcataagttgttaccataaactcttgcaaatagtctcacaagtgcttatg 13000377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 7918459 - 7918399
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||| || |||||||||| |||||||||||| ||| |||||| ||| ||||||||    
T  7918459 ttatgaacatgtcttaagttgttttcataagctctcccaaacagtctctcatctgcttatg 7918399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 8558719 - 8558767
Alignment:
Q  143 atggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    |||||||| ||| |||||||||||||||||||||| ||| || ||||||    
T  8558719 atggacatgtcacaagttgtttccataagctctcccaaacagcctcaca 8558767  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 9541009 - 9540973
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctcc 177  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  9541009 ttatggacatgtcataagatgtttccataagctctcc 9540973  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 11569470 - 11569410
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    ||||| |||| ||||||| |||||||||||||||||  ||| ||||||||| ||| |||||    
T  11569470 ttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatg 11569410  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 26479836 - 26479892
Alignment:
Q  135 aaaaatttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||| |||| |||||  ||||||||||||||||||||||||  ||||||| |||||    
T  26479836 aaaaacttatagacatgacataagttgtttccataagctctcgcaaatagtttcaca 26479892  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 26499785 - 26499833
Alignment:
Q  153 cataagttgtttccataagctctccaaaatagtctcacatgtgcttatg 201  Q
    |||||| ||||| ||||| |||| ||||||||||||||| |||||||||    
T  26499785 cataagctgttttcataacctctacaaaatagtctcacaagtgcttatg 26499833  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 30259171 - 30259215
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagt 185  Q
    |||| ||||||||||||| |||||||||||||||||  |||||||    
T  30259171 ttatagacatatcataagctgtttccataagctctctcaaatagt 30259215  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 31875608 - 31875576
Alignment:
Q  141 ttatggacatatcataagttgtttccataagct 173  Q
    |||||||||| ||||||||||||||||||||||    
T  31875608 ttatggacatgtcataagttgtttccataagct 31875576  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 37740440 - 37740404
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctcc 177  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  37740440 ttatggacatgtcataagttgtttccataaactctcc 37740404  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 9791 - 9741
Alignment:
Q  141 ttatggacatatcataagttgtttccataagctctccaaaatagtctcaca 191  Q
    ||||||||| ||| ||||||||||||||| ||||||| ||| |||||||||    
T  9791 ttatggacacatcgtaagttgtttccataggctctcccaaacagtctcaca 9741  T

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