View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0956_low_23 (Length: 253)

Name: NF0956_low_23
Description: NF0956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0956_low_23
NF0956_low_23
[»] chr6 (31 HSPs)
chr6 (60-216)||(56014-56170)
chr6 (59-216)||(12322705-12322862)
chr6 (61-216)||(54807-54961)
chr6 (59-216)||(12321560-12321718)
chr6 (59-216)||(24235532-24235690)
chr6 (61-216)||(22058180-22058336)
chr6 (60-210)||(34762181-34762331)
chr6 (61-216)||(22056482-22056638)
chr6 (59-206)||(24234327-24234475)
chr6 (131-206)||(6000582-6000657)
chr6 (131-209)||(24914509-24914587)
chr6 (132-198)||(33483767-33483833)
chr6 (61-117)||(14328647-14328703)
chr6 (61-117)||(14421657-14421713)
chr6 (59-117)||(24325741-24325799)
chr6 (59-108)||(3063493-3063542)
chr6 (144-209)||(5999793-5999858)
chr6 (61-101)||(24387778-24387818)
chr6 (59-107)||(29942454-29942502)
chr6 (57-117)||(31851754-31851814)
chr6 (61-107)||(7922317-7922363)
chr6 (61-107)||(10344050-10344096)
chr6 (61-107)||(13114398-13114444)
chr6 (133-198)||(11424830-11424895)
chr6 (60-117)||(20754574-20754631)
chr6 (59-92)||(22574056-22574089)
chr6 (59-119)||(24062165-24062223)
chr6 (62-107)||(30381567-30381612)
chr6 (55-83)||(16129539-16129567)
chr6 (73-117)||(19412402-19412446)
chr6 (61-117)||(23270210-23270266)
[»] chr2 (57 HSPs)
chr2 (55-216)||(16670493-16670654)
chr2 (58-216)||(18250791-18250950)
chr2 (58-216)||(23834578-23834736)
chr2 (60-216)||(18249630-18249786)
chr2 (131-216)||(16671705-16671790)
chr2 (59-216)||(23835675-23835831)
chr2 (60-216)||(38937410-38937566)
chr2 (131-216)||(44368286-44368371)
chr2 (60-216)||(1902929-1903086)
chr2 (60-216)||(1904310-1904467)
chr2 (61-216)||(7576325-7576480)
chr2 (131-210)||(41305952-41306031)
chr2 (61-216)||(44366867-44367023)
chr2 (131-216)||(38813646-38813731)
chr2 (131-210)||(5970664-5970743)
chr2 (131-216)||(38937000-38937085)
chr2 (131-209)||(38815002-38815080)
chr2 (139-198)||(22292557-22292616)
chr2 (61-209)||(38935945-38936092)
chr2 (131-209)||(21903995-21904073)
chr2 (58-198)||(7577696-7577837)
chr2 (131-206)||(38876060-38876135)
chr2 (131-205)||(38876934-38877008)
chr2 (131-210)||(19684272-19684351)
chr2 (59-117)||(44241095-44241153)
chr2 (139-206)||(10355232-10355299)
chr2 (131-206)||(36565306-36565381)
chr2 (62-117)||(38210865-38210920)
chr2 (60-106)||(16577359-16577405)
chr2 (60-117)||(30371384-30371441)
chr2 (61-109)||(5970763-5970810)
chr2 (62-117)||(22466982-22467038)
chr2 (60-107)||(19493459-19493506)
chr2 (59-114)||(19686183-19686238)
chr2 (60-107)||(22116154-22116201)
chr2 (139-198)||(22293464-22293523)
chr2 (60-107)||(38386170-38386217)
chr2 (139-198)||(39151237-39151296)
chr2 (59-117)||(15747749-15747807)
chr2 (59-93)||(17328090-17328124)
chr2 (57-107)||(22535450-22535500)
chr2 (55-93)||(23260314-23260352)
chr2 (58-91)||(3364588-3364621)
chr2 (131-208)||(5969799-5969876)
chr2 (58-107)||(16577111-16577160)
chr2 (62-107)||(18701552-18701597)
chr2 (58-91)||(19052200-19052233)
chr2 (60-93)||(34635705-34635738)
chr2 (56-93)||(38385930-38385967)
chr2 (61-117)||(5969725-5969781)
chr2 (61-117)||(12028198-12028253)
chr2 (61-93)||(19641446-19641478)
chr2 (61-93)||(19840039-19840071)
chr2 (61-93)||(29835102-29835134)
chr2 (63-107)||(30371607-30371651)
chr2 (61-93)||(37147551-37147583)
chr2 (73-117)||(44610939-44610982)
[»] chr1 (57 HSPs)
chr1 (131-218)||(2273570-2273657)
chr1 (60-216)||(23322511-23322668)
chr1 (139-210)||(6077018-6077089)
chr1 (131-216)||(2274564-2274649)
chr1 (58-216)||(14625367-14625525)
chr1 (131-216)||(23321334-23321419)
chr1 (141-210)||(27547406-27547475)
chr1 (56-216)||(14626680-14626841)
chr1 (60-198)||(43635834-43635970)
chr1 (139-206)||(51903390-51903457)
chr1 (60-214)||(9442893-9443048)
chr1 (58-209)||(9441564-9441716)
chr1 (61-209)||(52084734-52084884)
chr1 (137-206)||(44312044-44312113)
chr1 (131-206)||(5560942-5561017)
chr1 (131-206)||(37193548-37193623)
chr1 (60-198)||(8928814-8928953)
chr1 (131-209)||(37194399-37194476)
chr1 (140-213)||(52083630-52083702)
chr1 (58-198)||(8930267-8930406)
chr1 (62-117)||(31648587-31648642)
chr1 (131-209)||(13917180-13917258)
chr1 (56-117)||(13902060-13902121)
chr1 (63-117)||(1825296-1825350)
chr1 (59-117)||(26097028-26097086)
chr1 (64-117)||(15336378-15336430)
chr1 (60-117)||(26095813-26095870)
chr1 (56-100)||(2472602-2472646)
chr1 (58-118)||(38742382-38742441)
chr1 (57-93)||(47022094-47022130)
chr1 (61-108)||(52083580-52083628)
chr1 (56-91)||(13545574-13545609)
chr1 (131-206)||(13916161-13916236)
chr1 (58-93)||(25235771-25235806)
chr1 (131-198)||(38741545-38741612)
chr1 (60-107)||(44200326-44200373)
chr1 (56-107)||(50596169-50596220)
chr1 (61-107)||(10027988-10028034)
chr1 (58-108)||(13903381-13903431)
chr1 (59-117)||(14978710-14978768)
chr1 (59-93)||(18458827-18458861)
chr1 (60-93)||(9439427-9439460)
chr1 (60-117)||(16785721-16785778)
chr1 (52-85)||(22059823-22059856)
chr1 (60-117)||(22604663-22604720)
chr1 (58-107)||(24963014-24963063)
chr1 (60-93)||(24987607-24987640)
chr1 (58-107)||(28724322-28724371)
chr1 (58-107)||(30434277-30434326)
chr1 (60-93)||(32131928-32131961)
chr1 (131-216)||(44311277-44311362)
chr1 (57-93)||(2059451-2059487)
chr1 (59-107)||(4646755-4646803)
chr1 (61-117)||(7112494-7112550)
chr1 (63-107)||(21853418-21853462)
chr1 (61-117)||(44826081-44826137)
chr1 (61-117)||(51470129-51470185)
[»] chr4 (44 HSPs)
chr4 (58-216)||(50881325-50881482)
chr4 (131-216)||(55499321-55499406)
chr4 (60-216)||(55500306-55500464)
chr4 (60-216)||(34739887-34740044)
chr4 (64-216)||(34741295-34741448)
chr4 (58-210)||(54554380-54554531)
chr4 (58-216)||(20962191-20962349)
chr4 (59-216)||(29249611-29249769)
chr4 (61-216)||(20963601-20963757)
chr4 (59-209)||(29248240-29248390)
chr4 (60-192)||(40479442-40479574)
chr4 (131-206)||(49630509-49630584)
chr4 (63-198)||(2438254-2438389)
chr4 (61-206)||(12566850-12566996)
chr4 (64-190)||(51752686-51752812)
chr4 (142-206)||(17695884-17695948)
chr4 (131-206)||(43537521-43537596)
chr4 (55-118)||(51754200-51754263)
chr4 (58-117)||(43860914-43860973)
chr4 (59-117)||(24215742-24215800)
chr4 (60-117)||(11563518-11563575)
chr4 (131-198)||(7533660-7533727)
chr4 (62-117)||(21994328-21994383)
chr4 (58-107)||(21780119-21780168)
chr4 (132-209)||(37600875-37600952)
chr4 (61-117)||(550673-550729)
chr4 (57-93)||(20125443-20125479)
chr4 (61-117)||(34027195-34027251)
chr4 (57-117)||(38656056-38656116)
chr4 (134-206)||(46427158-46427230)
chr4 (61-117)||(50138488-50138544)
chr4 (61-117)||(54555352-54555408)
chr4 (131-198)||(7535347-7535414)
chr4 (139-198)||(15695096-15695155)
chr4 (131-206)||(50879978-50880053)
chr4 (55-117)||(48029409-48029470)
chr4 (61-117)||(7272266-7272323)
chr4 (64-117)||(11563296-11563349)
chr4 (58-107)||(22272927-22272976)
chr4 (60-93)||(37273420-37273453)
chr4 (139-216)||(54555251-54555328)
chr4 (73-117)||(1952961-1953005)
chr4 (59-107)||(35539602-35539650)
chr4 (131-203)||(43537752-43537824)
[»] chr7 (49 HSPs)
chr7 (56-216)||(9554161-9554322)
chr7 (131-216)||(25776407-25776492)
chr7 (59-213)||(9553398-9553553)
chr7 (131-210)||(11056803-11056882)
chr7 (61-216)||(17764601-17764757)
chr7 (60-209)||(17763335-17763485)
chr7 (131-216)||(48170163-48170248)
chr7 (58-206)||(1831892-1832039)
chr7 (131-210)||(33767297-33767376)
chr7 (56-216)||(34158053-34158213)
chr7 (60-209)||(1830811-1830960)
chr7 (58-117)||(48168847-48168906)
chr7 (65-187)||(8174888-8175011)
chr7 (59-107)||(19272460-19272508)
chr7 (61-117)||(38193195-38193251)
chr7 (58-108)||(1594134-1594184)
chr7 (59-117)||(9915649-9915706)
chr7 (59-117)||(9923561-9923618)
chr7 (52-117)||(16902339-16902402)
chr7 (61-117)||(19410509-19410566)
chr7 (61-117)||(13279418-13279474)
chr7 (58-93)||(6269525-6269560)
chr7 (59-117)||(12814592-12814651)
chr7 (131-198)||(17238206-17238273)
chr7 (59-117)||(23161098-23161156)
chr7 (56-107)||(26050415-26050465)
chr7 (56-107)||(26059774-26059824)
chr7 (131-198)||(31433559-31433626)
chr7 (131-198)||(37413789-37413856)
chr7 (131-198)||(48909678-48909745)
chr7 (58-117)||(48945181-48945240)
chr7 (61-107)||(23371449-23371495)
chr7 (59-93)||(23784582-23784616)
chr7 (131-196)||(9113345-9113410)
chr7 (56-108)||(11056724-11056777)
chr7 (145-206)||(13771645-13771706)
chr7 (56-93)||(13882598-13882635)
chr7 (60-117)||(14554449-14554506)
chr7 (60-117)||(24555903-24555959)
chr7 (61-117)||(5909713-5909769)
chr7 (58-106)||(10688455-10688503)
chr7 (131-167)||(13772591-13772627)
chr7 (59-107)||(21298256-21298304)
chr7 (131-198)||(24436305-24436372)
chr7 (142-198)||(35891088-35891144)
chr7 (60-92)||(35913310-35913342)
chr7 (61-93)||(39580191-39580223)
chr7 (138-198)||(47637793-47637853)
chr7 (150-206)||(48168915-48168971)
[»] chr5 (37 HSPs)
chr5 (61-210)||(10012715-10012863)
chr5 (60-216)||(15061725-15061881)
chr5 (131-216)||(29520205-29520290)
chr5 (131-216)||(29521331-29521416)
chr5 (60-216)||(41064143-41064300)
chr5 (60-216)||(15615102-15615258)
chr5 (131-213)||(40434546-40434628)
chr5 (59-216)||(11956137-11956295)
chr5 (59-216)||(41065558-41065716)
chr5 (133-213)||(8367903-8367983)
chr5 (60-216)||(11957550-11957707)
chr5 (61-209)||(21776815-21776964)
chr5 (59-216)||(15060161-15060319)
chr5 (61-209)||(30796579-30796727)
chr5 (131-210)||(40434314-40434392)
chr5 (59-209)||(15616408-15616559)
chr5 (133-210)||(11439707-11439784)
chr5 (131-216)||(21775532-21775617)
chr5 (131-216)||(30798480-30798565)
chr5 (133-206)||(42003984-42004057)
chr5 (60-198)||(11438338-11438476)
chr5 (61-117)||(12399587-12399643)
chr5 (132-198)||(37274817-37274883)
chr5 (56-117)||(9751677-9751738)
chr5 (56-117)||(26034840-26034901)
chr5 (56-117)||(37274743-37274804)
chr5 (62-117)||(13948583-13948638)
chr5 (62-117)||(28819537-28819592)
chr5 (54-85)||(39418763-39418794)
chr5 (60-117)||(9750446-9750504)
chr5 (59-93)||(29104442-29104476)
chr5 (60-117)||(29321308-29321366)
chr5 (59-93)||(38482316-38482350)
chr5 (60-93)||(10976772-10976805)
chr5 (60-93)||(22551521-22551554)
chr5 (131-192)||(33750988-33751049)
chr5 (61-117)||(38313170-38313226)
[»] chr8 (45 HSPs)
chr8 (62-216)||(27164560-27164714)
chr8 (131-216)||(1601155-1601240)
chr8 (60-216)||(39809988-39810145)
chr8 (133-216)||(1601743-1601826)
chr8 (58-216)||(27163113-27163272)
chr8 (61-214)||(1600077-1600228)
chr8 (131-216)||(1602800-1602885)
chr8 (58-216)||(42350079-42350238)
chr8 (61-209)||(39808649-39808796)
chr8 (131-206)||(3252233-3252308)
chr8 (131-201)||(39913851-39913921)
chr8 (61-209)||(42348961-42349109)
chr8 (131-198)||(16432681-16432748)
chr8 (131-206)||(28561931-28562006)
chr8 (131-206)||(28567429-28567504)
chr8 (131-206)||(28574609-28574684)
chr8 (139-208)||(5704440-5704509)
chr8 (60-117)||(12330332-12330389)
chr8 (56-93)||(25277731-25277768)
chr8 (61-117)||(2270292-2270348)
chr8 (60-107)||(14329611-14329658)
chr8 (131-198)||(16434468-16434535)
chr8 (139-198)||(21397802-21397861)
chr8 (139-198)||(21792295-21792354)
chr8 (50-93)||(25601972-25602015)
chr8 (56-107)||(27987292-27987343)
chr8 (56-107)||(28044594-28044645)
chr8 (131-198)||(32901497-32901564)
chr8 (60-107)||(34985333-34985380)
chr8 (59-93)||(29309563-29309597)
chr8 (59-117)||(40702011-40702069)
chr8 (56-117)||(25653699-25653760)
chr8 (58-107)||(27198141-27198190)
chr8 (60-117)||(39513866-39513923)
chr8 (59-112)||(43400669-43400722)
chr8 (61-93)||(960522-960554)
chr8 (59-107)||(3912491-3912539)
chr8 (57-117)||(4105281-4105340)
chr8 (57-117)||(19157926-19157986)
chr8 (56-107)||(27543406-27543458)
chr8 (61-93)||(27543650-27543682)
chr8 (60-92)||(27987552-27987584)
chr8 (60-92)||(28044854-28044886)
chr8 (139-203)||(28575027-28575091)
chr8 (61-117)||(43945169-43945225)
[»] scaffold0210 (2 HSPs)
scaffold0210 (60-216)||(4706-4863)
scaffold0210 (131-216)||(5794-5879)
[»] chr3 (46 HSPs)
chr3 (62-216)||(10615276-10615430)
chr3 (58-210)||(15086219-15086372)
chr3 (60-209)||(46597417-46597566)
chr3 (61-209)||(46610009-46610157)
chr3 (57-210)||(22256198-22256352)
chr3 (52-198)||(37977429-37977572)
chr3 (59-216)||(10616673-10616833)
chr3 (139-202)||(38843466-38843529)
chr3 (60-198)||(46596094-46596232)
chr3 (63-117)||(48044276-48044330)
chr3 (131-206)||(28208057-28208132)
chr3 (131-206)||(43930712-43930787)
chr3 (131-206)||(2011872-2011947)
chr3 (1-60)||(2302514-2302573)
chr3 (131-198)||(15093633-15093700)
chr3 (131-198)||(16386511-16386578)
chr3 (131-198)||(24842891-24842958)
chr3 (131-210)||(48288269-48288348)
chr3 (139-210)||(51116289-51116360)
chr3 (59-117)||(7248863-7248921)
chr3 (59-117)||(18142198-18142256)
chr3 (61-114)||(54567747-54567800)
chr3 (59-107)||(20957180-20957228)
chr3 (62-117)||(27521521-27521577)
chr3 (142-206)||(28207059-28207123)
chr3 (61-117)||(31172299-31172355)
chr3 (61-117)||(47115563-47115619)
chr3 (54-117)||(51252285-51252349)
chr3 (59-107)||(51460774-51460822)
chr3 (137-205)||(52396360-52396428)
chr3 (139-206)||(2011134-2011201)
chr3 (131-198)||(23539334-23539401)
chr3 (139-198)||(27315272-27315331)
chr3 (62-117)||(29313789-29313844)
chr3 (59-117)||(18140938-18140996)
chr3 (58-107)||(26927507-26927557)
chr3 (61-107)||(51252049-51252095)
chr3 (60-93)||(6510214-6510247)
chr3 (60-117)||(15093715-15093772)
chr3 (64-117)||(24528391-24528443)
chr3 (132-209)||(24528471-24528548)
chr3 (58-91)||(27497796-27497829)
chr3 (58-107)||(27760286-27760335)
chr3 (60-93)||(49872974-49873007)
chr3 (59-107)||(25110072-25110120)
chr3 (61-93)||(49880762-49880794)
[»] scaffold0250 (2 HSPs)
scaffold0250 (55-210)||(10074-10229)
scaffold0250 (131-198)||(11488-11555)
[»] scaffold0228 (3 HSPs)
scaffold0228 (131-210)||(8153-8232)
scaffold0228 (131-210)||(15735-15814)
scaffold0228 (131-210)||(25687-25766)
[»] scaffold0040 (2 HSPs)
scaffold0040 (131-198)||(65962-66029)
scaffold0040 (54-198)||(64496-64640)
[»] scaffold0246 (3 HSPs)
scaffold0246 (133-216)||(15947-16030)
scaffold0246 (60-192)||(17381-17513)
scaffold0246 (60-117)||(15871-15928)
[»] scaffold0176 (1 HSPs)
scaffold0176 (60-209)||(195-346)
[»] scaffold0291 (1 HSPs)
scaffold0291 (131-206)||(20910-20985)
[»] scaffold0804 (1 HSPs)
scaffold0804 (56-216)||(2728-2889)
[»] scaffold1571 (1 HSPs)
scaffold1571 (131-198)||(116-183)
[»] scaffold1147 (1 HSPs)
scaffold1147 (131-198)||(2531-2598)
[»] scaffold0725 (1 HSPs)
scaffold0725 (59-117)||(3912-3970)
[»] scaffold0289 (1 HSPs)
scaffold0289 (56-117)||(9915-9976)
[»] scaffold0112 (1 HSPs)
scaffold0112 (139-200)||(36140-36201)
[»] scaffold0032 (1 HSPs)
scaffold0032 (56-93)||(91045-91082)
[»] scaffold0850 (2 HSPs)
scaffold0850 (131-199)||(1522-1590)
scaffold0850 (131-198)||(4564-4631)
[»] scaffold0497 (1 HSPs)
scaffold0497 (131-198)||(1469-1536)
[»] scaffold0093 (3 HSPs)
scaffold0093 (131-198)||(8967-9034)
scaffold0093 (142-198)||(2741-2797)
scaffold0093 (142-198)||(7364-7420)
[»] scaffold0010 (1 HSPs)
scaffold0010 (61-107)||(26308-26354)
[»] scaffold0769 (1 HSPs)
scaffold0769 (60-93)||(4176-4209)
[»] scaffold0384 (2 HSPs)
scaffold0384 (58-107)||(4246-4295)
scaffold0384 (61-106)||(4439-4484)
[»] scaffold0227 (1 HSPs)
scaffold0227 (133-198)||(24857-24922)
[»] scaffold0136 (2 HSPs)
scaffold0136 (60-117)||(637-694)
scaffold0136 (60-117)||(35598-35655)
[»] scaffold0129 (1 HSPs)
scaffold0129 (131-176)||(37333-37378)
[»] scaffold1122 (1 HSPs)
scaffold1122 (61-117)||(292-348)
[»] scaffold0142 (1 HSPs)
scaffold0142 (61-93)||(34851-34883)
[»] scaffold0031 (2 HSPs)
scaffold0031 (61-93)||(1827-1859)
scaffold0031 (58-117)||(2060-2120)


Alignment Details
Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 56170 - 56014
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||||             ||||||| || ||||||||||||||||||    
T  56170 agggttaataggtctttaccccctgtaatatagggcacttttgattttgtcccctgtaattttttttttttagattccgtcgttgtaaaatgaagattct 56071  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  56070 tcacgattgccccctaagcccattgactcagcagaatctttgatgtggcacctacat 56014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 12322862 - 12322705
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||| ||||| |||||||| |           ||||||| |||||||||||||||||||    
T  12322862 aagggttaataggtctttacccccctgtaatatagggcacttttgattttgccccctgta-atttttttttttagattccgtccttgtaaaatgaagatt 12322764  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12322763 cttcacgattgccccctaagcccattgactcagcagaatctttgatgtggcacttacat 12322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 54807 - 54961
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    |||||||||||||||| || ||||| |||||||  | |||||||||||||||||||| |           ||||||| ||||||||||||||||||| ||    
T  54807 gggttaataggtcttt-cctcctgtaatataggacacttttggttttgtcccctgtaaaaaaaaaaaattagattccgtccttgtaaaatgaagattatt 54905  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  54906 cacgattgccccctaagctcattgactcagcagaatctttgatgtggtacctacat 54961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 12321560 - 12321718
Alignment:
Q  59 aagggttaataggtcttta-ccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||||| | ||||||             ||||| | |||||||||||||||||||    
T  12321560 aagggttaataggtctttatccccctgtaatatagggtacttttggttttgcctcctgtaattttttttttatagatttcgtccttgtaaaatgaagatt 12321659  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||||| || |||||| ||||||| ||||||||||||||||||||||||||||    
T  12321660 cttcacgattgccccttaagcctattgacttagcagaatctttgatgtggcacctacat 12321718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 24235690 - 24235532
Alignment:
Q  59 aagggttaataggtctttacccc-ctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    ||||||||||||||||||||||| |||| |||||||| | ||||||||||| |||||||| |           ||||||  |||||||||||||||||||    
T  24235690 aagggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaaaatttatttttagattctgtccttgtaaaatgaagatt 24235591  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  24235590 cttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcacctacat 24235532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 22058336 - 22058180
Alignment:
Q  61 gggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  22058336 gggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaattcttttttttagattccgtccttgtaaaatgaagattct 22058237  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| || | |||||  |||||||||||||||| |||||||||||||||||    
T  22058236 tcaagattgccccttgagccctatgactcagcagaatctatgatgtggcacctacat 22058180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 210
Target Start/End: Original strand, 34762181 - 34762331
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||| ||||||||||||||| ||||| |||||||| | |||||||||||  ||||||| |           ||||| | |||||||||||||||||||||    
T  34762181 agggctaataggtctttacctcctgtaatatagggcacttttggttttgctccctgtaaatttttttttatagatttcgtccttgtaaaatgaagattct 34762280  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    |||| ||||| |||||||||||||||||||||||||||||| | |||||||    
T  34762281 tcacaattgccccctaagcccattgactcagcagaatcttttaggtggcac 34762331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 22056482 - 22056638
Alignment:
Q  61 gggttaataggtctttacc-ccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  22056482 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgtaaaatgaagattct 22056581  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| ||| |  |||||||||||||||| |||||||||||||||||    
T  22056582 tcaagattgccccctgagctctgtgactcagcagaatctatgatgtggcacctacat 22056638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 24234327 - 24234475
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||  | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  24234327 aagggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaaaaaaaatttagattccgtccttgtaaaatgaagatt 24234426  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||| |||||| |||| |||||  |||||||||||||||| |||||||    
T  24234427 cttcaagattgccccctgagccctgtgactcagcagaatctatgatgtg 24234475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 6000657 - 6000582
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||||||||||||||||||||||    
T  6000657 agattccatccttgtaaaataaagattcttcaggattgccccctatgccctgtgactcagcagaatctttgatgtg 6000582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 24914509 - 24914587
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||||| |||||||||||||||||||||||| |||||| ||||||| ||  |||||||||||||||| ||||||||||    
T  24914509 agattccgtccttgtaaaatgaagattcttcaagattgccccctaagtcctgtgactcagcagaatctatgatgtggca 24914587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 33483767 - 33483833
Alignment:
Q  132 gattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||| ||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||    
T  33483767 gattccgtccttgtaaaatgaagattattcacaattgccacctaagcccattgactcagcagaatct 33483833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 14328703 - 14328647
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||||| ||||||||    
T  14328703 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgta 14328647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 14421713 - 14421657
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||||| ||||||||    
T  14421713 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgta 14421657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 24325799 - 24325741
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||| ||| || || | ||||||||||||| |||||||||    
T  24325799 aagggttaataggtctttaccccgtgtaatttatgttatttttggttttttcccctgta 24325741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 3063542 - 3063493
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttg 108  Q
    ||||||||||||||||||||||||||| |||||||  | |||||||||||    
T  3063542 aagggttaataggtctttaccccctgtaatataggtcacttttggttttg 3063493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 5999793 - 5999858
Alignment:
Q  144 gtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||||| ||||||||||| |||||| |||| ||| |  |||||||||||||||| ||||||||||    
T  5999793 gtaaaataaagattcttcaggattgccccctgagctctgtgactcagcagaatctatgatgtggca 5999858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 24387818 - 24387778
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtattttt 101  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  24387818 gggttaataggtctttaccccctgtaatataggttattttt 24387778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 29942502 - 29942454
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||||| |||||||  |||| |||||||    
T  29942502 aagggttaataggtctttaccccctgtaatataggtcatttctggtttt 29942454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 31851754 - 31851814
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| ||||||| |||||||  ||||| ||||||  ||||||||    
T  31851754 aaaagggttaataggtctttatcccctgtaatataggtcattttcggttttcccccctgta 31851814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 7922317 - 7922363
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||| ||||||| |||||||  ||||||||||||    
T  7922317 gggttaataggtctttatcccctgtaatataggtcatttttggtttt 7922363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 10344050 - 10344096
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||| |||||||  |||| |||||||    
T  10344050 gggttaataggtctttaccccctgtaatataggtcatttctggtttt 10344096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 13114398 - 13114444
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  13114398 gggttaataggtctttaccccctgtaatataggtcattttcggtttt 13114444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 11424830 - 11424895
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||||||||| ||||||||||| |||||  ||||||  ||  ||||||||| ||||||    
T  11424830 attccatccttgtaaaataaagattcttcaggattgtcccctaactcctatgactcagctgaatct 11424895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 20754631 - 20754574
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||| || ||||||||||||| |||||||  ||||||  ||||||||||||||    
T  20754631 agggttaattggcctttaccccctgtaatataggtcattttttattttgtcccctgta 20754574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 22574089 - 22574056
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatag 92  Q
    ||||||||||||||||||||||||||| ||||||    
T  22574089 aagggttaataggtctttaccccctgtaatatag 22574056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 24062165 - 24062223
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtata 119  Q
    ||||||||||||||||||||||||| | |||||||  |||| ||||||  |||||||||||    
T  24062165 aagggttaataggtctttaccccctataatataggtcatttctggttt--tcccctgtata 24062223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 30381567 - 30381612
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||| ||||||| ||||||| |||||| ||||||    
T  30381567 ggttaataggtctttatcccctgtaatataggttattttcggtttt 30381612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 16129539 - 16129567
Alignment:
Q  55 taaaaagggttaataggtctttaccccct 83  Q
    |||||||||||||||||||||||||||||    
T  16129539 taaaaagggttaataggtctttaccccct 16129567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 19412402 - 19412446
Alignment:
Q  73 ctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||| |||||||||||||  ||||||||    
T  19412402 ctttaccccctgtaatataggttatttttggttttcccccctgta 19412446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 23270266 - 23270210
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||| | |||||||  | ||||| |||||||| |||||    
T  23270266 gggttaataggtctttaccccctttaatataggtcacttttgattttgtcctctgta 23270210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 16670493 - 16670654
Alignment:
Q  55 taaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaag 154  Q
    |||||| |||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||             ||||||| || |||||||||||||    
T  16670493 taaaaaaggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaattttttttttttagattccgtcattgtaaaatgaag 16670592  T
Q  155 attcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  16670593 attcttcacgattgccccctaagctcattgactcagcagaatctttgatgtggcacctacat 16670654  T

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Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 18250950 - 18250791
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||| | ||||||             ||||||| ||||||||||||||||||    
T  18250950 aaagggttaataggtctttacccccctgtaatatagggcatttttggttttgcctcctgtaattttttttttttagattccgtccttgtaaaatgaagat 18250851  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18250850 tcttcacgattgttccctaagcccattgactcagcagaatctttgatgcggcacctacat 18250791  T

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Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 23834578 - 23834736
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||    
T  23834578 aaagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgta-atttttttttttagattccgtccttgtaaaatgaagat 23834676  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23834677 tcttcacgattgtcccctaagcccattgactcagcagaatctttgatgtggcacctacat 23834736  T

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Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 18249630 - 18249786
Alignment:
Q  60 agggttaataggtctttaccccct-gtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    |||||||||||||||||||||||| || ||||| || | ||||||||||||| |||||| |           ||||||  ||||||||||||||||||||    
T  18249630 agggttaataggtctttacccccttgtaatatatggcacttttggttttgtctcctgta-aattttttttttagattctgtccttgtaaaatgaagattc 18249728  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  18249729 ttcacgattgccccctaagcccattgactcagcagaatctttgatgtgacacctacat 18249786  T

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Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 16671790 - 16671705
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  16671790 agattccgttcttgtaaaatgaagattcttcacgattgccccctaagctcattgactcagcagaatctttgatgtggcacctacat 16671705  T

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Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 23835831 - 23835675
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||||||| |||||||| | |||| |||||| |||||||| |            |||||| ||||||||||||||||||||    
T  23835831 aagggttaataggtctttaccccctgtaatatagggcacttttagttttgccccctgtaaaaaaaaaaaatc-gattccgtccttgtaaaatgaagattc 23835733  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||| |   |||||||||||||||||||| ||||||||||||||||||||||||    
T  23835732 ttcacgatcgtctcctaagcccattgactcagcggaatctttgatgtggcacctacat 23835675  T

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Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 38937566 - 38937410
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||| ||||| || |           ||||||| |||||||||||||||||||||    
T  38937566 agggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctataaaaaaaaaaaattagattccgtccttgtaaaatgaagattct 38937467  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| |||||  |||||||||||||||| |||||||| ||||||||    
T  38937466 tcaagattgccccctgagccctgtgactcagcagaatctatgatgtggaacctacat 38937410  T

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Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 44368371 - 44368286
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  44368371 agattccgtccttgtataatgaagattcttcacgattgccccctaaacccagtgactcagcagaatctttgatgtggcacctacat 44368286  T

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Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 1902929 - 1903086
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||||    
T  1902929 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgaagattc 1903028  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  1903029 ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 1903086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 1904467 - 1904310
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||  |           ||||||| ||||||||||||||||||||    
T  1904467 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtgaaaaaaaatttttagattccgtccttgtaaaatgaagattc 1904368  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  1904367 ttcaagattgccccctgagccctatgactcagcagaatctatgatgtggcacctacat 1904310  T

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Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 7576325 - 7576480
Alignment:
Q  61 gggttaataggtcttta-ccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    ||||||||||||||||| |||||||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  7576325 gggttaataggtctttatccccctgtaatatagggcacttttggttttgccccctgtaaaatattttttttagattccgtccttgtaaaatgaagattct 7576424  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| ||||   |||||||||||||||| |||||||||||||||||    
T  7576425 tcaagattgc-ccctgagccatgtgactcagcagaatctatgatgtggcacctacat 7576480  T

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Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 41305952 - 41306031
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  41305952 agattccgtccttgtaaaatgaagcttcttcacgattgccccctaaacccattgactcagcagaatctctgatgtggcac 41306031  T

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Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 44366867 - 44367023
Alignment:
Q  61 gggttaataggtctttacc-ccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  44366867 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgtaaaatgaagattct 44366966  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| ||| |  |||||||||||||||| |||||||||||||||||    
T  44366967 tcaagattgccccctgagctctgtgactcagcagaatctatgatgtggcacctacat 44367023  T

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Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 38813646 - 38813731
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||||  |||||||||||||||| |||||||||||||||||    
T  38813646 agattccgtccttgtaaaatgaatattcttcaagattgccccctaagccctgtgactcagcagaatctatgatgtggcacctacat 38813731  T

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Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 5970743 - 5970664
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||    
T  5970743 agattccgttcttgtaaaatgaagattcttcacgattgtcccctaagcccattgactcagcagaatctctgaggtggcac 5970664  T

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Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 38937000 - 38937085
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| |||||  |||||||||||||||| |||||||| ||||||||    
T  38937000 agattccgtccttgtaaaatgaagattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggaacctacat 38937085  T

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Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 38815080 - 38815002
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  38815080 agattccgtccttgtaaaatgaagattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggca 38815002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 22292557 - 22292616
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  22292557 tccttgtaaaatgaagattcttcacgattgccccctaagcccattgattgagcagaatct 22292616  T

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Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 38935945 - 38936092
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    ||||||||||||||||||||| ||| |||||||  | ||||||||||| || ||||| |           ||||||| ||||||||||||||||||||||    
T  38935945 gggttaataggtctttacccc-tgtaatataggacacttttggttttgcccactgtaaaaaaaaaaatttagattccgtccttgtaaaatgaagattctt 38936043  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    || |||||| |||| |||||  |||||||||||||||  ||||||||||    
T  38936044 caagattgccccctgagccctgtgactcagcagaatcaatgatgtggca 38936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 21903995 - 21904073
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  21903995 agattccgtccttgtaaaataaagattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggca 21904073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 7577837 - 7577696
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| |||||||| | ||||||||||  |||||||| |           ||||||| ||||||||||||||||||    
T  7577837 aaagggttaataggtctttacccccctgtaatatagggcacttttggttttaccccctgtaaatttttttttttagattccgtccttgtaaaatgaagat 7577738  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    || ||| |||||| |||| ||||   ||||||||||||||||    
T  7577737 tcatcaagattgccccctgagccttgtgactcagcagaatct 7577696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 38876060 - 38876135
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||| |||||||    
T  38876060 agattccgtccttgtaaaataaagattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtg 38876135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 38877008 - 38876934
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgt 205  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||| ||||||    
T  38877008 agattccgtccttgtaaaataaagattcttcaagattgccccctgagccctatgactcagcagaatctatgatgt 38876934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 19684272 - 19684351
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    |||||| ||| |||| |||| |||||||||||   |||| || |||| ||||||||||||||||||||||||||||||||    
T  19684272 agattcgatctttgtcaaataaagattcttcagatttgccccataaggccattgactcagcagaatctttgatgtggcac 19684351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 44241095 - 44241153
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| |||||| |||||| |||||||  ||||||||||||||||||||||    
T  44241095 aagggttaataggactttactccctgtaatataggtcatttttggttttgtcccctgta 44241153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 10355299 - 10355232
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||||||||| ||||||||||| |||||  ||||| ||||  |||||||||| |||||||||||||    
T  10355299 tccttgtaaaataaagattcttcaggattgtcccctatgccctatgactcagcataatctttgatgtg 10355232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 36565306 - 36565381
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| || || |||    |||||||||||||||||||||||    
T  36565306 agattccgtccttgtaaaataaagattcttcaggattgccccatatgccttgggactcagcagaatctttgatgtg 36565381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 38210865 - 38210920
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||| |||||||  |||| ||||||| |||||||||    
T  38210865 ggttaataggtctttaccccctgtaatataggtaatttctggttttctcccctgta 38210920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 16577405 - 16577359
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttt 106  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  16577405 agggttaataggtctttaccccctgtaatataggttatttctggttt 16577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 30371384 - 30371441
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||  ||||||||    
T  30371384 agggttaataggtctttactccctgtaatataggtcatttttggttttcccccctgta 30371441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 5970810 - 5970763
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgt 109  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  5970810 gggttaataggtctttacccc-tgtaatatagggtacttttggttttgt 5970763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 22466982 - 22467038
Alignment:
Q  62 ggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| ||| |||||||  | ||||||||||||||||||||    
T  22466982 ggttaataggtctttacccccctgtaatataggtcacttttggttttgtcccctgta 22467038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 19493506 - 19493459
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  19493506 agggttaataggtctttaccccctgtaatataggtcattttcggtttt 19493459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 19686238 - 19686183
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccct 114  Q
    ||||||||||||  ||||||||||||| |||||||| | ||||||||||| |||||    
T  19686238 aagggttaatagtgctttaccccctgtaatatagggcacttttggttttgccccct 19686183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 22116154 - 22116201
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  22116154 agggttaataggtctttaccccctgtaatataggtcattttcggtttt 22116201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 22293523 - 22293464
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||| |||||||||||  ||||| ||| |||||| |||| ||||||||||||    
T  22293523 tccttgtaaaataaagattcttcagtattgccccccaagccctttgagtcagcagaatct 22293464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 38386217 - 38386170
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||| ||||||| ||||||| ||||||| |||||||||||||    
T  38386217 agggttaatatgtctttatcccctgtaatataggttatttttggtttt 38386170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 39151296 - 39151237
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||| |||||||||||  |||||  ||||||||| |||| ||||||||||||    
T  39151296 tccttgtaaaataaagattcttcagaattgcctcctaagccctttgagtcagcagaatct 39151237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 15747749 - 15747807
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||  ||||||||||||| |||||||  | |||||||||||| |||||||    
T  15747749 aagggttaatagacctttaccccctgtaatataggtcacttttggttttgttccctgta 15747807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 17328090 - 17328124
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||| |||||||    
T  17328090 aagggttaataggtctttaccccctgtaatatagg 17328124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 22535450 - 22535500
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||||| | |||||||  ||||| ||||||    
T  22535450 aaaagggttaataggtctttaccccctttaatataggtcattttcggtttt 22535500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 23260314 - 23260352
Alignment:
Q  55 taaaaagggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  23260314 taaaaagggttaataggtctttactccctgtaatatagg 23260352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 3364621 - 3364588
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatata 91  Q
    |||||||||||||||||||||||||||| |||||    
T  3364621 aaagggttaataggtctttaccccctgtaatata 3364588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 5969799 - 5969876
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggc 208  Q
    ||||||| |||||||||||| ||||||||| | |||||  |||| | |||  |||||||||||||||| | |||||||    
T  5969799 agattccgtccttgtaaaataaagattcttaatgattgtcccctgacccctatgactcagcagaatctcttatgtggc 5969876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 16577111 - 16577160
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||  || ||||||||| |||||||| ||||    
T  16577111 aaagggttaataggtctttaccttctatgatataggttatttttgatttt 16577160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 18701552 - 18701597
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||| ||||||| |||||||  ||||||||||||    
T  18701552 ggttaataggtctttatcccctgtaatataggtcatttttggtttt 18701597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 19052233 - 19052200
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatata 91  Q
    |||||||||||||||||||||||||||| |||||    
T  19052233 aaagggttaataggtctttaccccctgtaatata 19052200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 34635705 - 34635738
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  34635705 agggttaataggtctttaccccctgtaatatagg 34635738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 38385930 - 38385967
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  38385930 aaaaaaggttaataggtctttaccccctgtaatatagg 38385967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 5969725 - 5969781
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||  ||||| ||||||| |||||||||| ||||||||||| | ||||||    
T  5969725 gggttaatagagctttatcccctgtaatatagggtacttttggttttgcctcctgta 5969781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 12028198 - 12028253
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||| |||||| |||||||  ||||||| |||| |||||||||    
T  12028198 gggttaataggtctttacaccctgtaatataggtcatttttgatttt-tcccctgta 12028253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 19641446 - 19641478
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  19641446 gggttaataggtctttaccccctgtaatatagg 19641478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 19840039 - 19840071
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  19840039 gggttaataggtctttaccccctgtaatatagg 19840071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 29835102 - 29835134
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  29835102 gggttaataggtctttaccccctgtaatatagg 29835134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 30371651 - 30371607
Alignment:
Q  63 gttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||| |||||||  |||| |||||||    
T  30371651 gttaataggtctttaccccctgtaatataggtcatttctggtttt 30371607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 37147551 - 37147583
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  37147551 gggttaataggtctttaccccctgtaatatagg 37147583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 44610939 - 44610982
Alignment:
Q  73 ctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  44610939 ctttaccccctgtaatataggttatttttggtttt-tcccctgta 44610982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 2273570 - 2273657
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacatag 218  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2273570 agattccgtccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacatag 2273657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 23322668 - 23322511
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||| | | ||||||||||| ||||||||             ||||||| ||||||||||||||||||||    
T  23322668 agggttaataggtctttacccccctgtaatatagagcacttttggttttgccccctgtaattatttttttttagattccgtccttgtaaaatgaagattc 23322569  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  23322568 ttcacgattgccctctaagcccattgactcagcagaatctttgatgtggcacctacat 23322511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 6077018 - 6077089
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6077018 tccttgtaaaatgaagattcttcacgattgccccctaagcccattgactcagcagaatctttgatgtggcac 6077089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 2274649 - 2274564
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| |||||||||||    
T  2274649 agattccgtccttgtaaaatgaagattcttcacgattgtcccctaagcccattaactcagcagaatctttgatgaggcacctacat 2274564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 14625367 - 14625525
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||||||| |||||||  | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  14625367 aaagggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgaagatt 14625466  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||| | || |||||  |||||||||||||||| ||||||||| |||||||    
T  14625467 cttcaagattgccctctgagccctgtgactcagcagaatctatgatgtggcgcctacat 14625525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 23321334 - 23321419
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||    
T  23321334 agattccgtccttgtaaaatgaagattcttcacgattgccccttaagcccattgactctgcagaatctttaatgtggcacctacat 23321419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 27547406 - 27547475
Alignment:
Q  141 cttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27547406 cttgtaaaatgaagattcttcacgattgccccctaagcccattgactcagcagaatctttgatgtggcac 27547475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 14626841 - 14626680
Alignment:
Q  56 aaaaagggttaataggtctttac-cccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaag 154  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| | |||||| |           ||||||| ||||||||||||||||    
T  14626841 aaaaagggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaatttttttttttagattccgtccttgtaaaatgaag 14626742  T
Q  155 attcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||| |||||| |||| |||||  |||||||||||||||| |||| ||||||||||||    
T  14626741 attcttcaagattgccccctgagccccgtgactcagcagaatctatgatatggcacctacat 14626680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 43635834 - 43635970
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||| ||||| || |           ||||| | |||||||||||||||||||||    
T  43635834 agggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctttaaaaaaaaaatt--agatttcgtccttgtaaaatgaagattct 43635931  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  43635932 tcacgattgacccctaagcccattgactcagcagaatct 43635970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 51903457 - 51903390
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51903457 tccttgtaaaatgaatattcttcacgattgccccctaagcccattgactcagcagaatctttgatgtg 51903390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 214
Target Start/End: Complemental strand, 9443048 - 9442893
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||| | | ||||||||||| ||| |||| |           ||||||| ||||||||||||||||||||    
T  9443048 agggttaataggtctttacccccctgtaatatagagcacttttggttttgccccttgtaaaaaaaattttttagattccgtccttgtaaaatgaagattc 9442949  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctac 214  Q
    |||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||    
T  9442948 ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcacctac 9442893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 9441564 - 9441716
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| ||||| |  | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||    
T  9441564 aaagggttaataggtctttacccccctgtaatataagacacttttggttttgccccctgtaaaaaattttttttagattccgtccttgtaaaatgaagat 9441663  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||||| |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  9441664 tcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggca 9441716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 52084884 - 52084734
Alignment:
Q  61 gggttaataggtctttaccccc--tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||  ||| |||||| | | |||||||||||||||||||| |           ||||||| |||||||||||| |||||||    
T  52084884 gggttaataggtctttaccccccctgtaatatagagcacttttggttttgtcccctgtaaaattttttttttagattccgtccttgtaaaataaagattc 52084785  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||| |||||| |||| ||||   |||||||||||||||| ||||||||||    
T  52084784 ttcaagattgccccctgagccatgtgactcagcagaatctatgatgtggca 52084734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 44312113 - 44312044
Alignment:
Q  137 catccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||||||||||| |||||||||||||||||| || || |||||||||||||||| |||||||||||||    
T  44312113 catccttgtaaaattaagattcttcacgattgccccatatgcccattgactcagcataatctttgatgtg 44312044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 5560942 - 5561017
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| ||||| || |  ||||||||||||||||||||||||    
T  5560942 agattccgtccttgtaaaataaagattcttcaagattgccccctatgctctgtgactcagcagaatctttgatgtg 5561017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 37193548 - 37193623
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||| || |  ||||| ||||||||||||||||||    
T  37193548 agattccatccttgtaaaataaagattcttcaagattgccccctatgcactgtgactgagcagaatctttgatgtg 37193623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 8928814 - 8928953
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta-tannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    |||||||||||||||||||||||||| ||||| || | ||||| ||||| |||||||| |            ||||||| | ||||||||||||||||||    
T  8928814 agggttaataggtctttaccccctgtaatataaggcacttttgattttgccccctgtaatttttttttttttagattccgttcttgtaaaatgaagattc 8928913  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||| | | | |||||||||||||||||||||| |||||    
T  8928914 ttcacaactaccccctaagcccattgactcagcaaaatct 8928953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 37194476 - 37194399
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  37194476 agattccgtccttgtaaaataaagattcttcaagattgc-ccctgagccccgtgactcagcagaatctatgatgtggca 37194399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 52083630 - 52083702
Alignment:
Q  140 ccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcaccta 213  Q
    |||||||||||||||||| |||| |||||| |||| |||||  |||||||||||||||| ||||||||||||||    
T  52083630 ccttgtaaaatgaagatt-ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcaccta 52083702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 8930406 - 8930267
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||   |||||||||||| ||||| |||| |||||||||||||||||||| |           ||||| | |||||||||||| ||||||    
T  8930406 aaagggttaatagagttttaccccctgtaatataaggtacttttggttttgtcccctgta-aaaaaaaaaattagatttcgtccttgtaaaataaagatt 8930308  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||| |||||| |||| | |||  ||||||||||||||||    
T  8930307 cttcaggattgccccctgacccctatgactcagcagaatct 8930267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 31648642 - 31648587
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||    
T  31648642 ggttaatagacctttaccccctgtaatataggttatttttggttttgtcccctgta 31648587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 13917258 - 13917180
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||||| |||||||||||| ||||||||||| ||||||  ||| |||||  |||||||||||||||  ||||||||||    
T  13917258 agattccgtccttgtaaaataaagattcttcaagattgcctcctgagccctgtgactcagcagaatccatgatgtggca 13917180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 13902060 - 13902121
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||| |||||||||||||||||| ||||| |||||||| | ||||||||||| ||||||||    
T  13902060 aaaaatggttaataggtctttaccacctgtaatatagggcagttttggttttgccccctgta 13902121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 1825296 - 1825350
Alignment:
Q  63 gttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||| |||||||  | ||||||||||| ||||||||    
T  1825296 gttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgta 1825350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 26097086 - 26097028
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||||| |||||||  | ||||||||||| | ||||||    
T  26097086 aagggttaataggtctttaccccctgtaatataggtcacttttggttttgcctcctgta 26097028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 15336378 - 15336430
Alignment:
Q  64 ttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||| |||||||  |||||||||||| |||||||||    
T  15336378 ttaataggtctttaccccctgtaatataggtcatttttggtttt-tcccctgta 15336430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 26095813 - 26095870
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||||| |||||||  | || |||||||| ||||||||    
T  26095813 agggttaataggtctttaccccctgtaatataggtcacttatggttttgccccctgta 26095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 2472646 - 2472602
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttt 100  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||    
T  2472646 aaaaatggttaataggtctttaccccctgtaatataggttatttt 2472602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 38742441 - 38742382
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtat 118  Q
    |||||||||||||  ||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  38742441 aaagggttaatagagctttaccccctgtaatatagggtacttttgattttg-cccctgtat 38742382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 47022130 - 47022094
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||||| |||||||    
T  47022130 aaaagggttaataggtctttaccccctgtaatatagg 47022094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 52083580 - 52083628
Alignment:
Q  61 gggttaataggtctttaccccc-tgtgatatagggtatttttggttttg 108  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  52083580 gggttaataggtctttacccccctgtaatatagggcatttttggttttg 52083628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 13545574 - 13545609
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatata 91  Q
    |||||||||||||||||||||||||||||| |||||    
T  13545574 aaaaagggttaataggtctttaccccctgtaatata 13545609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 13916161 - 13916236
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| | || ||| |  |||||||||| ||||| |||||||    
T  13916161 agattccgtccttgtaaaataaagattcttcaagattgcccactgagcgctgtgactcagcacaatctatgatgtg 13916236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 25235771 - 25235806
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||||| |||||||    
T  25235771 aaagggttaataggtctttaccccctgtaatatagg 25235806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 38741545 - 38741612
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||| |||||||||||||| |||||||||||  ||||| |||||| |||  |||||||||| |||||    
T  38741545 agatttcatccttgtaaaataaagattcttcagaattgccccctaacccctatgactcagcaaaatct 38741612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 44200326 - 44200373
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||| ||| |||||||  ||||||||||||    
T  44200326 agggttaataggtctttaccccttgtaatataggccatttttggtttt 44200373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 50596220 - 50596169
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||| ||||||||||||||||||||| ||| ||||||| ||||| |||||||    
T  50596220 aaaatgggttaataggtctttaccccttgtaatataggttatttctggtttt 50596169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 10028034 - 10027988
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||| |||||||  |||| |||||||    
T  10028034 gggttaataggtctttaccccctgtaatataggtcatttctggtttt 10027988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 13903431 - 13903381
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttg 108  Q
    ||||||||||||| |||||||||||||| |||||||  | |||||||||||    
T  13903431 aaagggttaatagatctttaccccctgtaatataggtcacttttggttttg 13903381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 14978768 - 14978710
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||||||||| |||||||  | ||||||||||| ||| ||||    
T  14978768 aagggttaataggcctttaccccctgttatataggacacttttggttttgccccttgta 14978710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 18458861 - 18458827
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||| |||||||    
T  18458861 aagggttaataggtctttaccccctgtaatatagg 18458827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 9439460 - 9439427
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  9439460 agggttaataggtctttaccccctgtaatatagg 9439427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 16785721 - 16785778
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||| ||||||||||||| || ||||  | ||||||||||| ||||||||    
T  16785721 agggttaataggcctttaccccctgtaatgtaggtcacttttggttttgccccctgta 16785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 22059856 - 22059823
Alignment:
Q  52 ttataaaaagggttaataggtctttaccccctgt 85  Q
    |||||||||||||||||| |||||||||||||||    
T  22059856 ttataaaaagggttaatatgtctttaccccctgt 22059823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 22604720 - 22604663
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||| ||||||| |||||||  ||||  |||||| |||||||||    
T  22604720 agggttaataggtctttaacccctgtaatataggtcatttccggttttttcccctgta 22604663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 24963063 - 24963014
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||  |||||||||||| ||||||| |||||||| ||||    
T  24963063 aaagggttaataggcttttaccccctgtaatataggttatttttgatttt 24963014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 24987607 - 24987640
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  24987607 agggttaataggtctttaccccctgtaatatagg 24987640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 28724322 - 28724371
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||||| | |||||  |||| |||||||    
T  28724322 aaagggttaataggtctttaccccctgtaaaataggtcatttctggtttt 28724371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 30434277 - 30434326
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||| |||||||||||||||| |||||||  |||||| |||||    
T  30434277 aaagggttaatcggtctttaccccctgtaatataggtcattttttgtttt 30434326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 32131961 - 32131928
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  32131961 agggttaataggtctttaccccctgtaatatagg 32131928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 44311277 - 44311362
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||| |||||||| ||||||||||| |||||| |||   |||| |||| |||||||||| | ||| |||||| ||||||    
T  44311277 agattccgtccatgtaaaataaagattcttcaagattgccccccgtgccctttgaatcagcagaatttctgacgtggcagctacat 44311362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 2059487 - 2059451
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagg 93  Q
    |||||| |||||||||||||||||||||| |||||||    
T  2059487 aaaaggattaataggtctttaccccctgtaatatagg 2059451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 4646755 - 4646803
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||| | ||||| |  ||||||||||||    
T  4646755 aagggttaataggtctttaccccctctaatataagtcatttttggtttt 4646803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 7112494 - 7112550
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| ||||| |  ||||| ||||||  ||||||||    
T  7112494 gggttaataggtctttaccccctgtaatatatgtcattttcggtttttccccctgta 7112550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 21853418 - 21853462
Alignment:
Q  63 gttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||| |||||||  |||| |||||||    
T  21853418 gttaataggtctttaccccctgtaatataggtcatttctggtttt 21853462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 44826081 - 44826137
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||| ||||||||||||||| ||| |||  ||||| |||||| |||||||||    
T  44826081 gggttaataagtctttaccccctgtaatagaggtcattttcggttttctcccctgta 44826137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 51470129 - 51470185
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| ||||| |  | ||||||||||| || |||||    
T  51470129 gggttaataggtctttaccccctgtaatataagtcacttttggttttgccctctgta 51470185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 50881482 - 50881325
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||||||| |||||||  | ||||||||||| |||||||| |           ||||||| || ||||||||||||||||    
T  50881482 aaagggttaataggtctttaccccctgtaatataggccacttttggttttgccccctgta-aaaaaaaaaattagattccgtcattgtaaaatgaagatt 50881384  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  50881383 cttcacgattgccccttaagcccattgactcagcagaatctttgatgtggcacctacat 50881325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 55499321 - 55499406
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55499321 agattccgtccttgtaaaatgaagatttttcacgattgccccctaagcccattgactcagcagaatctttgatgtggcacctacat 55499406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 55500464 - 55500306
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta-tannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||||||| |||||||| |            ||||||||||| |||||||||||||||    
T  55500464 agggttaataggtctttacccccctgtaatataggacatttttggttttgccccctgtaattttattttttttagattccatccctgtaaaatgaagatt 55500365  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||    
T  55500364 cttcacgattgccccctaagcccgttgactaagcagaatctttgatgtggcacctacat 55500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 34739887 - 34740044
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||||    
T  34739887 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaaaaatttttttagattccgtccttgtaaaatgaagattc 34739986  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  34739987 ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 34740044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 34741448 - 34741295
Alignment:
Q  64 ttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattcttca 162  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||||||||    
T  34741448 ttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgaagattcttca 34741349  T
Q  163 cgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
     |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  34741348 agattgccccctgagccctatgactcagcagaatctatgatgtggcacctacat 34741295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 54554380 - 54554531
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||             ||||| | |||||||||||||||| |     
T  54554380 aaagggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaatattttgtttttagatttcgtccttgtaaaatgaag-tc 54554478  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  54554479 cttcacgattgccacctaagcccattaactcagcagaatctttgatgtggcac 54554531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 20962191 - 20962349
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  20962191 aaagggttaatagatctttaccccctgtaatatatggcacttttggttttgccccctgtaaaaatttttttttagattccgtccttgtaaaatgaagatt 20962290  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| ||||||  ||| |||||  |||||||||||||||| ||||||||| |||||||    
T  20962291 cttcaagattgcctcctgagccctgtgactcagcagaatctatgatgtggcgcctacat 20962349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 29249769 - 29249611
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||| | |||||||||||| ||||||    
T  29249769 aagggttaataggtctttacccccctgtaatatagggaacttttggttttgccccctgtaaatttttttttttagatttcgtccttgtaaaataaagatt 29249670  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  29249669 cttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcacctacat 29249611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 20963757 - 20963601
Alignment:
Q  61 gggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||| ||| |||||||| | |||||| |||| |||||||| |           ||||||| |||||||||||||||||||||    
T  20963757 gggttaataggtctttacccccctgtaatatagggcacttttggctttgccccctgtaaatttttttttttagattccgtccttgtaaaatgaagattct 20963658  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||  |||| |||||  |||||||||||||||| |||||||||||||||||    
T  20963657 tcaagattgtcccctgagccctgtgactcagcagaatctatgatgtggcacctacat 20963601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 29248240 - 29248390
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||||||| |||||||  | ||||||||||  || ||||| |           ||||||| ||||||||||||||||||||    
T  29248240 aagggttaataggtctttaccccctgtaatataggacacttttggttttacccgctgtaaatttatttttttagattccgtccttgtaaaatgaagattc 29248339  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||| |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  29248340 ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggca 29248390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 40479574 - 40479442
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||| ||| || |||| |||||||||| |||||||||||||| |||||             | ||||| |||||||||||||||||||||    
T  40479574 agggttaataggtcattatcctctgtaatatagggtacttttggttttgtcctctgtaattttttttttttaaattccgtccttgtaaaatgaagattct 40479475  T
Q  160 tcacgattgctccctaagcccattgactcagca 192  Q
    |||||||||| ||||||||||| ||||||||||    
T  40479474 tcacgattgccccctaagcccaatgactcagca 40479442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 49630584 - 49630509
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||| |||||||||    
T  49630584 agattccgtccttgtaaaatgaagatttttcacgattgcaccctaagatcattgactcagcagaatttttgatgtg 49630509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 2438254 - 2438389
Alignment:
Q  63 gttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattcttca 162  Q
    ||||||| ||||||||||||||| |||||| |||| |||| ||||||||| |||| |           |||||||||||||||||||| |||||||||||    
T  2438254 gttaatatgtctttaccccctgtaatatagagtatatttgattttgtcccttgtaaaattttttttttagattccatccttgtaaaataaagattcttca 2438353  T
Q  163 cgattgctccctaagcccattgactcagcagaatct 198  Q
     ||||||||||| | |||  ||||||||||||||||    
T  2438354 ggattgctccctgacccctatgactcagcagaatct 2438389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 206
Target Start/End: Complemental strand, 12566996 - 12566850
Alignment:
Q  61 gggttaataggtctttaccccct-gtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||||| |||||||| |           ||||||  |||||||||||||||||||||    
T  12566996 gggttaataggtctttacccccttgtaatatagggcacttttggttttgccccctgtaaaatttgtttcttagattctgtccttgtaaaatgaagattct 12566897  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||| |||||| |||| |||||  ||||||||| |||||| |||||||    
T  12566896 tcaagattgccccctgagccctgtgactcagctgaatctatgatgtg 12566850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 51752686 - 51752812
Alignment:
Q  64 ttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattcttcac 163  Q
    |||||||||||||||||||||| ||||| |  | ||||| ||||| |||||||| |           ||||||| |||||||||||||||||||||||||    
T  51752686 ttaataggtctttaccccctgtaatatatgacacttttgattttgccccctgtaaaaaaaataaattagattccgtccttgtaaaatgaagattcttcac 51752785  T
Q  164 gattgctccctaagcccattgactcag 190  Q
    |||||| || |||||||||||||||||    
T  51752786 gattgccccataagcccattgactcag 51752812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 17695948 - 17695884
Alignment:
Q  142 ttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||||||||||||||||||||||||  || ||| |||||||||||||||||| |||||||||    
T  17695948 ttgtaaaatgaagattcttcacgattgccaccgaagtccattgactcagcagaatatttgatgtg 17695884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 43537521 - 43537596
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| ||||| |||   ||||||||||||||||||||||||    
T  43537521 agattccgtccttgtaaaataaagattcttcaggattgccccctatgccttgtgactcagcagaatctttgatgtg 43537596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 51754263 - 51754200
Alignment:
Q  55 taaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtat 118  Q
    ||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||| |||||||    
T  51754263 taaaaagggttaatagagctttaccccctgtaatatagggtacttttggttttgtcacctgtat 51754200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 43860973 - 43860914
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||| ||||| |||||||| | ||||||||||||| ||||||    
T  43860973 aaagggttaataggtctttacctcctgtaatatagggcacttttggttttgtctcctgta 43860914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 24215800 - 24215742
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||||| |||||||  |||| ||||||| |||||||||    
T  24215800 aagggttaataggtctttaccccctgtaatataggtcatttctggttttctcccctgta 24215742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 11563575 - 11563518
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||||| |||||||  |||| ||||||| |||||||||    
T  11563575 agggttaataggtctttaccccctgtaatataggtcatttctggttttttcccctgta 11563518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 7533660 - 7533727
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||||||||||||||||    
T  7533660 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatct 7533727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 21994328 - 21994383
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||| |||||||  | ||||| ||||||||||||||    
T  21994328 ggttaataggtctttaccccctgtaatataggacacttttgattttgtcccctgta 21994383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 21780119 - 21780168
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  21780119 aaagggttaataggtctttaccccctgtaatataggtcattttcggtttt 21780168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 37600875 - 37600952
Alignment:
Q  132 gattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||||| |||||||||||| ||||||||| | |||||  | ||||| ||  |||||||||||||||| ||||||||||    
T  37600875 gattccgtccttgtaaaataaagattctttaggattggcctctaagtcctatgactcagcagaatctctgatgtggca 37600952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 550673 - 550729
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  |||||| |||||| ||| ||||    
T  550673 gggttaataggtctttaccccctgtaatataggtcatttttagttttgccccttgta 550729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 20125479 - 20125443
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||||| |||||||    
T  20125479 aaaagggttaataggtctttaccccctgtaatatagg 20125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 34027251 - 34027195
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||| ||||||||||||| |||||||  | ||||||||||| ||||||||    
T  34027251 gggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgta 34027195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 38656116 - 38656056
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||||| | |||||||  |||||| ||||| ||| |||||    
T  38656116 aaaagggttaataggtctttaccccctataatataggtcattttttgttttttccactgta 38656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 46427230 - 46427158
Alignment:
Q  134 ttccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||| ||||| |||||| ||||||| ||| |||||| |||| |||||  |||||||||||||||| |||||||    
T  46427230 ttccgtccttataaaataaagattcatcaagattgccccctgagccctgtgactcagcagaatctatgatgtg 46427158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 50138488 - 50138544
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  ||||| ||||||  ||||||||    
T  50138488 gggttaataggtctttaccccctgtaatataggtcattttcggtttttccccctgta 50138544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 54555408 - 54555352
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||| ||||||||||||||| ||||| || | ||||||||||| ||||||||    
T  54555408 gggttaataagtctttaccccctgtaatatatggcacttttggttttgccccctgta 54555352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 7535414 - 7535347
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| ||||   |||| | |||| ||||||||||||||||    
T  7535414 agattccacccttgaaaaatgaagattcttcaggattagcccctcaccccaatgactcagcagaatct 7535347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 15695155 - 15695096
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||| ||||||||||||||||||| |||||  |||||||||  |||| ||||||||||||    
T  15695155 tcctcgtaaaatgaagattcttcaggattgtcccctaagccagttgagtcagcagaatct 15695096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 50879978 - 50880053
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||| ||||||| |||||| |||| |||||| |||| ||||   |||||||||||||||| |||||||    
T  50879978 agattccgtcctggtaaaataaagatttttcaggattgccccctgagccttgtgactcagcagaatctatgatgtg 50880053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 48029409 - 48029470
Alignment:
Q  55 taaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||| ||||||||||||| || || |||  ||||||||||| ||||||||    
T  48029409 taaaaagggttaataggcctttaccccctgtaattta-ggtcattttggttttgccccctgta 48029470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 7272266 - 7272323
Alignment:
Q  61 gggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||| ||| ||||||| |||||| ||||||  ||||||||    
T  7272266 gggttaataggtctttacccccttgtaatataggttattttcggttttcccccctgta 7272323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 11563296 - 11563349
Alignment:
Q  64 ttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||| ||| | ||||||| ||||||| ||||| |||||||||    
T  11563296 ttaataggtctttacctcctataatataggttattttttgttttctcccctgta 11563349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 22272927 - 22272976
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||| |||||||||||| |||||||  ||||| ||||||    
T  22272927 aaagggttaataggtttttaccccctgtaatataggtcattttcggtttt 22272976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 37273453 - 37273420
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  37273453 agggttaataggtctttaccccctgtaatatagg 37273420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 54555328 - 54555251
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||||||| |||||||||||||||||| ||   ||||| |||| | |||| ||||| ||| |||||| ||||||    
T  54555328 tccttgtaaaataaagattcttcacgattgcccctcgagccctttgagtaagcaaaatctctgacgtggcaactacat 54555251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 1953005 - 1952961
Alignment:
Q  73 ctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||| ||||||| ||||| |||||||||    
T  1953005 ctttaccccctgtaatataggttattttttgttttctcccctgta 1952961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 35539602 - 35539650
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||| |||||||||||| ||||||| |||||||  ||||||||||||    
T  35539602 aagggtcaataggtctttatcccctgtaatataggtcatttttggtttt 35539650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 43537824 - 43537752
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgat 203  Q
    ||||||| ||||| |||||| || |||||||| |||||| |||| ||||   |||||||||||||||| ||||    
T  43537824 agattccgtccttctaaaataaaaattcttcaggattgccccctgagccatatgactcagcagaatctatgat 43537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 9554322 - 9554161
Alignment:
Q  56 aaaaagggttaataggtctttaccc-cctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaag 154  Q
    ||||||||||||||  ||||||||| ||||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||    
T  9554322 aaaaagggttaataaatctttaccctcctgtaatatagggcacttttggttttgccccctgtaaaaaaaaaaaattagattccgtccttgtaaaatgaag 9554223  T
Q  155 attcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  9554222 attcttcacgattgccccctaagcccattgactcagcataatctatgatgtggcacctacat 9554161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 25776492 - 25776407
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25776492 agattccgtccttgtaaaatgaaaattcttcacaattgccccctaagcccattgactcagcagaatctttgatgtggcacctacat 25776407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 9553398 - 9553553
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnn-agattccatccttgtaaaatgaagatt 157  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||||| | |||||| |            ||||||| |||||||||||||||||||    
T  9553398 aagggttaataggtctttaccccctgtaatatagggcacttttggttttgcctcctgtaaattatttttttttagattccgtccttgtaaaatgaagatt 9553497  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcaccta 213  Q
    |||||||||||| ||||||||||| | |||||||| ||||||||||||| ||||||    
T  9553498 cttcacgattgccccctaagcccaataactcagcataatctttgatgtgccaccta 9553553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 11056803 - 11056882
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  11056803 agattccgtccttgtaaaatgaagattcttcacgattgccccctaagcccattgactcagcagaatctctgaggtggcac 11056882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 17764757 - 17764601
Alignment:
Q  61 gggttaataggtctttacccc-ctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||| || |||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  17764757 gggttaataggtctttactccactgtaatatagggcacttttggttttgccccctgtaaaaaaaattttttagattccgtccttgtaaaatgaagattct 17764658  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  17764657 tcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcacctacat 17764601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 17763335 - 17763485
Alignment:
Q  60 agggttaataggtctttacccc-ctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    |||||||||||||||||||||| |||| |||||||  | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||||    
T  17763335 agggttaataggtctttacccctctgtaatataggacacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgaagattc 17763434  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||| |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  17763435 ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggca 17763485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 48170248 - 48170163
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  48170248 agattccgtccttgtaaaatgaagattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcacctacat 48170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 1832039 - 1831892
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||| ||||||||||||| |||||||| | ||||| ||||  |||||||| |           |||||| ||||||||||||| ||||||    
T  1832039 aaagggttaatagggctttaccccctgtaatatagggcacttttgattttc-cccctgtaaatttttttttttagattctatccttgtaaaataaagatt 1831941  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||| |||||| ||||||||||  |||||||||||||||| |||||||    
T  1831940 cttcaagattgccccctaagccctgtgactcagcagaatctatgatgtg 1831892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 33767376 - 33767297
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| || ||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||    
T  33767376 agattccgtctttgtaaaattaagattcttcacgattgtcccctaagcccattgactcagcacaatctttgatgcggcac 33767297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 34158053 - 34158213
Alignment:
Q  56 aaaaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaag 154  Q
    ||||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||| | |           ||||||| ||||||||||||||||    
T  34158053 aaaaagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgna-aaaaaaaaaattagattccgtccttgtaaaatgaag 34158151  T
Q  155 attcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||||| |||||| |||  | |||  |||||||||||||||| ||||||| ||| |||||    
T  34158152 attcttcaagattgcccccagatccctgtgactcagcagaatctatgatgtgacacatacat 34158213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 1830811 - 1830960
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||| ||||||||||||| ||||||| || ||||| ||||  ||| |||| |           ||||||| || ||||||||| ||||||||    
T  1830811 agggttaatagggctttaccccctgtaatataggatacttttgattttcccccttgtaaatttttttttttagattccgtctttgtaaaataaagattct 1830910  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||| ||||||||||| |||||  ||||| |||||||||| || |||||||    
T  1830911 tcaagattgctccctgagccctgtgacttagcagaatctatggtgtggca 1830960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 48168847 - 48168906
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||| |||| |||||||| | ||||||||||| ||||||||    
T  48168847 aaagggttaataggtctttaccctctgtaatatagggcacttttggttttgccccctgta 48168906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 8174888 - 8175011
Alignment:
Q  65 taataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnn-agattccatccttgtaaaatgaagattcttcac 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||||   |||||| |            ||||||| || ||||||||||||||||||||||    
T  8174888 taataggtctttaccccctgtaatatagggcatttttggttttgcatcctgtaaaaaaaaaaaaattagattccgtctttgtaaaatgaagattcttcac 8174987  T
Q  164 gattgctccctaagcccattgact 187  Q
    |||||  |||||||||||| ||||    
T  8174988 gattgtcccctaagcccatggact 8175011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 19272508 - 19272460
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  19272508 aagggttaataggtctttaccccctgtaatataggtcatttttggtttt 19272460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 38193251 - 38193195
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  |||| ||||||| |||||||||    
T  38193251 gggttaataggtctttaccccctgtaatataggtcatttctggttttctcccctgta 38193195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 1594184 - 1594134
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttg 108  Q
    |||||||||||||||||||||||||||| |||||||  | |||||||||||    
T  1594184 aaagggttaataggtctttaccccctgtaatataggtcacttttggttttg 1594134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 9915649 - 9915706
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||  ||||| |||||||||    
T  9915649 aagggttaataggtctttaccccctgtaatataggttattttcagtttt-tcccctgta 9915706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 9923561 - 9923618
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||  ||||| |||||||||    
T  9923561 aagggttaataggtctttaccccctgtaatataggttattttcagtttt-tcccctgta 9923618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 16902402 - 16902339
Alignment:
Q  52 ttataaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||| |||||||||||||||||| ||||||| |||||||  |||||||||||| |||||||||    
T  16902402 ttataaatagggttaataggtcttta-cccctgtaatataggtcatttttggtttt-tcccctgta 16902339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 19410509 - 19410566
Alignment:
Q  61 gggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||||||    
T  19410509 gggttaataggtctttacccccttgtaatataggttatttctggttttttcccctgta 19410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 13279474 - 13279418
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  ||||| ||||||  ||||||||    
T  13279474 gggttaataggtctttaccccctgtaatataggtcattttcggtttttccccctgta 13279418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 6269525 - 6269560
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||||| |||||||    
T  6269525 aaagggttaataggtctttaccccctgtaatatagg 6269560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 12814592 - 12814651
Alignment:
Q  59 aagggttaataggtctttac-cccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||| ||||||| |||||||  |||| ||||||| |||||||||    
T  12814592 aagggttaataggtctttactcccctgtaatataggtcatttgtggttttctcccctgta 12814651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 17238273 - 17238206
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||||    
T  17238273 agattccacccttgaaaaatgaagattcttcaggattgacccctcaccccaatgagtcagcagaatct 17238206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 23161098 - 23161156
Alignment:
Q  59 aagggttaataggtctttaccc-cctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| |||||||||    
T  23161098 aagggttaataggtctttaccctcctgtaatataggttacttttggtttt-tcccctgta 23161156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 26050465 - 26050415
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||| ||||||| ||||| ||| |||||||||||    
T  26050465 aaaaagggttaataggtctttaacccctgtaatata-ggtctttttggtttt 26050415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 26059824 - 26059774
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||| ||||||| ||||| ||| |||||||||||    
T  26059824 aaaaagggttaataggtctttaacccctgtaatata-ggtctttttggtttt 26059774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 31433626 - 31433559
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||||    
T  31433626 agattccacccttgaaaaatgaagattcttcaggattgacccctcaccccaatgagtcagcagaatct 31433559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 37413789 - 37413856
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||||| ||||||||||||||||| |||||  |||| | |||| ||  ||||||||||||    
T  37413789 agattccatccttgaaaaatgaagattcttcaggattgacccctcaccccaatgtgtcagcagaatct 37413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 48909745 - 48909678
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||||    
T  48909745 agattccacccttgaaaaatgaagattcttcaggattgaaccctcaccccaatgagtcagcagaatct 48909678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 48945181 - 48945240
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||| ||||||| |||| |||||||  ||||||||||||| ||| ||||    
T  48945181 aaagggttaataggtttttaccctctgtaatataggtcatttttggttttgccccttgta 48945240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 23371449 - 23371495
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||| |||||||  |||| |||||||    
T  23371449 gggttaataggtctttaccccctgtaatataggtcatttatggtttt 23371495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 23784582 - 23784616
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||| |||||||    
T  23784582 aagggttaataggtctttaccccctgtaatatagg 23784616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 9113345 - 9113410
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaat 196  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||    
T  9113345 agattccacccttgaaaaatgaagattcttcaagattggcccctcaccccaatgagtcagcagaat 9113410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 11056724 - 11056777
Alignment:
Q  56 aaaaagggttaataggtcttta-ccccctgtgatatagggtatttttggttttg 108  Q
    |||||||||||||||||||||| |||||||| ||||| || | |||||||||||    
T  11056724 aaaaagggttaataggtctttacccccctgtaatataaggcacttttggttttg 11056777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 13771645 - 13771706
Alignment:
Q  145 taaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||| ||||||||||| |||||| || || || |  ||||||||||||||||||||||||    
T  13771645 taaaataaagattcttcaagattgccccatatgcactatgactcagcagaatctttgatgtg 13771706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 13882598 - 13882635
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  13882598 aaaaagggttaataggtctttaccctctgtaatatagg 13882635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 14554506 - 14554449
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||| ||||||||||||| |||||||  |||||| |||||  ||||||||    
T  14554506 agggttaataggcctttaccccctgtaatataggtcattttttgttttcccccctgta 14554449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 24555959 - 24555903
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| |||||||||||| |||||||  |||| ||||||| |||||||||    
T  24555959 agggttaataggtttttaccccctgtaatataggtcatttctggtttt-tcccctgta 24555903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 5909713 - 5909769
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| ||| |||||||  |||| |||||||  ||||||||    
T  5909713 gggttaataggtctttaccccatgtaatataggtcatttctggtttttccccctgta 5909769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 10688455 - 10688503
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggttt 106  Q
    ||||||||||||||||||||||| |||| |||||||  |||| ||||||    
T  10688455 aaagggttaataggtctttaccctctgtaatataggtcatttctggttt 10688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 13772627 - 13772591
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgatt 167  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  13772627 agattccatccttgtaaaataaagattcttcaagatt 13772591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 21298304 - 21298256
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||| ||| ||| |||||||  ||||||||||||    
T  21298304 aagggttaataggtctttatcccttgtaatataggtcatttttggtttt 21298256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 24436372 - 24436305
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccat-tgactcagcagaatct 198  Q
    ||||||| |||||||||||| ||||||| ||| |||||| |||| | ||||| ||||||||||||||||    
T  24436372 agattccgtccttgtaaaataaagattcctcaggattgccccctga-cccatatgactcagcagaatct 24436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 35891088 - 35891144
Alignment:
Q  142 ttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||||| ||||||||||| |||||| |||| | |||  ||||||||||||||||    
T  35891088 ttgtaaaataaagattcttcaggattgccccctgacccctatgactcagcagaatct 35891144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 35913342 - 35913310
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatag 92  Q
    |||||||||||||||||||||||||| ||||||    
T  35913342 agggttaataggtctttaccccctgtaatatag 35913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 39580223 - 39580191
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  39580223 gggttaataggtctttaccccctgtaatatagg 39580191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 47637793 - 47637853
Alignment:
Q  138 atccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||||||||| ||||||||||| |||||| |||| | |||  ||||||| ||||||||    
T  47637793 atccttgtaaaataaagattcttcatgattgccccctgacccctatgactcatcagaatct 47637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 48168915 - 48168971
Alignment:
Q  150 tgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||| |||||||| |||||| |||| |||||  |||||||||||||||| |||||||    
T  48168915 tgaacattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtg 48168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 61 - 210
Target Start/End: Complemental strand, 10012863 - 10012715
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    ||||||||||||||||| || |||| |||||||||| ||||||||||||||||| || |           ||||| | ||||||||||||||||||||||    
T  10012863 gggttaataggtctttatcctctgtaatatagggtacttttggttttgtcccctata-atatttttttttagatttcgtccttgtaaaatgaagattctt 10012765  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10012764 cacgattgccccctaagcccattgactcagcagaatctttgatgtggcac 10012715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 15061881 - 15061725
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  15061881 agggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaaaaataaatttagattccgtccttgtaaaatgaagattct 15061782  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  15061781 tcaagattgccccctgagccctatgactcagcagaatctatgatgtggcacctacat 15061725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 29520205 - 29520290
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29520205 agattccgtctttgtaaaatgaagattcttcacgattgccccctaagcccattgactcagcagaatctatgatgtggcacctacat 29520290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 29521416 - 29521331
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  29521416 agattccgtccttgtaaaatgaagattcttcacgattgcctcctaagcccaatgactcagcagaatctttgatgtggcacctacat 29521331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 41064143 - 41064300
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||||    
T  41064143 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgaagattc 41064242  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  41064243 ttcaagattgccccctgagccctatgactcagcagaatctatgatgtggcacctacat 41064300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 15615102 - 15615258
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||| |           ||||||| |||||||||| ||||||||||    
T  15615102 agggttaataggtctttaccccctgtaatatagggcacttttggttttgtccccggtaaaattttttttttagattccgtccttgtaaattgaagattct 15615201  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||| |||||| |||| ||||   |||||||||||||||| |||||||||||||||||    
T  15615202 tcaagattgccccctgagccatgtgactcagcagaatctatgatgtggcacctacat 15615258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 40434546 - 40434628
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcaccta 213  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||||    
T  40434546 agattccatccttgtaaaatgaagattcttcacgattgtcccctaagcccattgactcagcagaatctctgatgtggctccta 40434628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 11956137 - 11956295
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  11956137 aagggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaattttttttttagattccgtccttgtaaaatgaagatt 11956236  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  11956237 cttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 11956295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 41065716 - 41065558
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  41065716 aagggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaattttttttttagattccttccttgtaaaatgaagatt 41065617  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  41065616 cttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 41065558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 8367983 - 8367903
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcaccta 213  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  8367983 attccgtccttgtaaaatgaagattcttcacgattgccccctaagctcattgacgcagcagaatctttgatgtggcaccta 8367903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 11957707 - 11957550
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||| |||||    
T  11957707 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgacgattc 11957608  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  11957607 ttcaagattgccccctgagccctatgactcagcagaatctatgatgtggcacctacat 11957550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 21776964 - 21776815
Alignment:
Q  61 gggttaataggtctttacccc-ctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    ||||||||||||||||||||| |||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||    
T  21776964 gggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgtaaaatgaagattct 21776865  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||| |||||| ||||||||||  |||||||||||||||| ||||||||||    
T  21776864 tcaagattgccccctaagccctgtgactcagcagaatctatgatgtggca 21776815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 15060161 - 15060319
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||  | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  15060161 aagggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaatttttttttagattccgtccttgtaaaatgaagatt 15060260  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  15060261 cttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 15060319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 30796579 - 30796727
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    ||||||||||||||||||||||| | |||||||| | ||||||||||| ||| |||| |           ||||||| ||||||||||||||||||||||    
T  30796579 gggttaataggtctttaccccctataatatagggcacttttggttttgccccttgtaaatttttttttttagattccgtccttgtaaaatgaagattctt 30796678  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    || |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  30796679 caagattgcaccctgagccctgtgactcagcagaatctatgatgtggca 30796727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 40434392 - 40434314
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  40434392 agattccgtccttgtaaaatgaa-attcttcacaattgccccctaagcccattgactcagcagaatctttgatgtggcac 40434314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 15616559 - 15616408
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagatt 157  Q
    |||||||||||||||||||||||| ||| |||||||  | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||    
T  15616559 aagggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaaaaaaaatttagattccgtccttgtaaaatgaagatt 15616460  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||| |||||| |||| |||||  |||||||||||||||| |||| |||||    
T  15616459 cttcaagattgccccctgagccctgtgactcagcagaatctatgatctggca 15616408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 11439784 - 11439707
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| ||| |||||||    
T  11439784 attccgtccttgtaaaatgaagattcttcacaattgcccactaagcccattgactcagcagaatctctgaggtggcac 11439707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 21775532 - 21775617
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| | |||  |||||||||||||||| |||||||||||||||||    
T  21775532 agattccgtccttgtaaaatgaagattcttcaagattgccccctgaaccctatgactcagcagaatctatgatgtggcacctacat 21775617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 30798565 - 30798480
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| |||||  |||||||||||||||| ||||||| |||||||||    
T  30798565 agattccgtccttgtaaaatgaagattcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtgacacctacat 30798480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 42003984 - 42004057
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||| ||||||||||||| ||||||||| |   |||| ||||||||||||||||||||||||||||||||||||    
T  42003984 attcaatccttgtaaaataaagattctttagatttgccccctaagcccattgactcagcagaatctttgatgtg 42004057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 11438338 - 11438476
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||  ||||||||||||| |||||||||| |||||||||||  ||||||| |           ||||||| ||| |||||||| ||||||||    
T  11438338 agggttaatagagctttaccccctgtaatatagggtacttttggttttgctccctgtaaatttttttttttagattccgtccatgtaaaataaagattct 11438437  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||| |||||  |||| | |||  ||||||||||||||||    
T  11438438 tcaggattgtcccctgacccctatgactcagcagaatct 11438476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 12399643 - 12399587
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||  ||||||||    
T  12399643 gggttaataggtctttaccccctgtaatataggttattttcggttttcccccctgta 12399587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 37274817 - 37274883
Alignment:
Q  132 gattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||| |||||||||||| ||||||||||| |||||| ||||||  ||  ||||||||||||||||    
T  37274817 gattccgtccttgtaaaataaagattcttcaggattgccccctaactcctatgactcagcagaatct 37274883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 9751738 - 9751677
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||  |||||||||||| |||||||  | ||||||||||| ||||||||    
T  9751738 aaaaagggttaataggcttttaccccctgtaatataggtcacttttggttttgccccctgta 9751677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 26034840 - 26034901
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||  |||||||  ||||||||||||  ||||||||    
T  26034840 aaaaagggttaataggtctttaccctctgcaatataggtcatttttggtttttccccctgta 26034901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 37274743 - 37274804
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||| ||||||||||  ||||||||||| | |||||||||| ||||||||||| ||||||||    
T  37274743 aaaaggggttaatagagctttaccccctataatatagggtacttttggttttgccccctgta 37274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 13948638 - 13948583
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||| ||||||| ||||| |||||||| | ||||||||||| ||||||||    
T  13948638 ggttaataggcctttacctcctgtaatatagggcacttttggttttgccccctgta 13948583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 28819537 - 28819592
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||| ||||||||||||| |||||||  | ||||||||||| ||||||||    
T  28819537 ggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgta 28819592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 85
Target Start/End: Original strand, 39418763 - 39418794
Alignment:
Q  54 ataaaaagggttaataggtctttaccccctgt 85  Q
    ||||||||||||||||||||||||||||||||    
T  39418763 ataaaaagggttaataggtctttaccccctgt 39418794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 9750446 - 9750504
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||| |||||||||| ||| |||||||  | ||||||||||||||||||||    
T  9750446 agggttaataggcctttacccccttgtaatataggtcacttttggttttgtcccctgta 9750504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 29104442 - 29104476
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||| |||||||    
T  29104442 aagggttaataggtctttaccccctgtaatatagg 29104476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 29321366 - 29321308
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||| || | ||| |||||||  ||||||||||||||||||||||    
T  29321366 agggttaataggtctttatcctcatgtaatataggtcatttttggttttgtcccctgta 29321308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 38482316 - 38482350
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||| |||||||    
T  38482316 aagggttaataggtctttaccccctgtaatatagg 38482350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 10976805 - 10976772
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  10976805 agggttaataggtctttaccccctgtaatatagg 10976772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 22551521 - 22551554
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  22551521 agggttaataggtctttaccccctgtaatatagg 22551554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 33750988 - 33751049
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagca 192  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| | |||  ||||||||||    
T  33750988 agattccgtccttgtaaaataaagattcttcaggattgccccctgatccctatgactcagca 33751049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 38313170 - 38313226
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||| ||||||| ||||||  ||||| ||||||| ||| |||||    
T  38313170 gggttaataggtctttatcccctgtaatatagattatttctggttttctcctctgta 38313226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 27164714 - 27164560
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattcttc 161  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||||    
T  27164714 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgtaaaatgaagattcttc 27164615  T
Q  162 acgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    | |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  27164614 aagattgccccctgagccctatgactcagcagaatctatgatgtggcacctacat 27164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 1601240 - 1601155
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1601240 agattccgtccttgtaaaatgaagattcttcacgattgccccctaagcccagtgactcagcagaatctttgatgtggaacctacat 1601155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 39810145 - 39809988
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||||    
T  39810145 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaattattttttttagattccgtccttgtaaaatgaagattc 39810046  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||| |||||| |||| |||||  |||||||||||||||| |||||||||||||||||    
T  39810045 ttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcacctacat 39809988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 1601743 - 1601826
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  1601743 attccgtcctagtaaaatgaagattcttcacgattgccccctaagcccagtgactcagcagaatctttgatgtggcacctacat 1601826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 27163113 - 27163272
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||    
T  27163113 aaagggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaaaaatttttttagattccgtccttgtaaaatgaagat 27163212  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  27163213 tcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 27163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 1600077 - 1600228
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    ||||||||||||||||||||||||| ||||| |  | ||||||||||| |||||  |||           ||||||| ||||| ||||||||||||||||    
T  1600077 gggttaataggtctttaccccctgtaatataagccacttttggttttgccccct--ataaaaaaaaaattagattccgtccttataaaatgaagattctt 1600174  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctac 214  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  1600175 cacgattgccccctaagctaattgactcagcagaatctttgatgtggcacctac 1600228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 1602885 - 1602800
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  1602885 agattccgtccttgtataatgaagattcttcacgattgccccctaaacccagtgactcagcagaatctttgatgtggcacctacat 1602800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 42350238 - 42350079
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| |||||| | ||||||||||||| |||||||| |           ||||||| ||||||||||||||||||    
T  42350238 aaagggttaataggtctttacccccctgtaatatagagcatttttggttttgccccctgtaaatttttttttttagattccgtccttgtaaaatgaagat 42350139  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    |||||| |||||| | || ||| |  ||||| |||||||||| |||||||||||||||||    
T  42350138 tcttcaagattgcccactgagctctgtgacttagcagaatctatgatgtggcacctacat 42350079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 39808649 - 39808796
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    ||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||  ||||||||||||||||||||||    
T  39808649 gggttaataggtctttacccc-tgtaatatagggcacttttggttttgccccctgtaaaaaaaaaaatttagattctgtccttgtaaaatgaagattctt 39808747  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    || |||||| |||| |||||  |||||||||||||||| ||||||||||    
T  39808748 caagattgccccctgagccctgtgactcagcagaatctatgatgtggca 39808796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 3252233 - 3252308
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  3252233 agattccgtccttataaaataaagattcttcacgattgccccctaagcccattgactcagtagaatctctgatgtg 3252308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 39913921 - 39913851
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttg 201  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||    
T  39913921 agattccgtccttgtaaaatgaagattcttcacgattgccccataagtccattgactcagcaaaatctttg 39913851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 42348961 - 42349109
Alignment:
Q  61 gggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           | ||||| |||||||||||||||||||||    
T  42348961 gggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgta-atttttctttttaaattccgtccttgtaaaatgaagattct 42349059  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||| |||||  |||| | |||  |||||||||||||||| ||||||||||    
T  42349060 tcaagattgtcccctgaaccctgtgactcagcagaatctatgatgtggca 42349109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 16432681 - 16432748
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||||||||||||||||    
T  16432681 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatct 16432748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 28562006 - 28561931
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||   |||| || |  ||||||||||||||||||||||||    
T  28562006 agattccgtccttgtaaaataaagattcttcaagattgtcacctatgcactgtgactcagcagaatctttgatgtg 28561931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 28567504 - 28567429
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||   |||| || |  ||||||||||||||||||||||||    
T  28567504 agattccgtccttgtaaaataaagattcttcaagattgtcacctatgcactgtgactcagcagaatctttgatgtg 28567429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 28574609 - 28574684
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| ||||| |||||| ||||||||||| |||||| |||| | |||  |||||||||||||||| |||||||    
T  28574609 agattccgtccttttaaaataaagattcttcaagattgccccctgaaccctgtgactcagcagaatctatgatgtg 28574684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 5704509 - 5704440
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggc 208  Q
    |||||||||||| ||||||||||| |||| | |||| |||||  ||||||||||| |||| |||||||||    
T  5704509 tccttgtaaaataaagattcttcaagattaccccctgagccctgtgactcagcagtatctatgatgtggc 5704440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 12330332 - 12330389
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||||| ||||||| ||||| | |||||  ||||||||    
T  12330332 agggttaataggtctttaccccctgtaatataggttatttctagtttttccccctgta 12330389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 25277768 - 25277731
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||||||| |||||||    
T  25277768 aaaaagggttaataggtctttaccccctgtaatatagg 25277731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 2270348 - 2270292
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||||  ||||||  | ||||||||||| ||||||||    
T  2270348 gggttaataggtctttaccccctgtattataggtcacttttggttttgccccctgta 2270292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 14329658 - 14329611
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  14329658 agggttaataggtctttaccccctgtaatataggtcattttcggtttt 14329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 16434535 - 16434468
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| || ||  |||| | |||| ||||||||||||||||    
T  16434535 agattccacccttgaaaaatgaagattcttcaggactggcccctcaccccaatgactcagcagaatct 16434468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 21397861 - 21397802
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||| ||||||||||| | |||| |||||| |||  ||||||||||||||||    
T  21397861 tccttgtaaaataaagattcttcaaggttgcaccctaacccctatgactcagcagaatct 21397802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 21792354 - 21792295
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||| ||||||||||| | |||| |||||| |||  ||||||||||||||||    
T  21792354 tccttgtaaaataaagattcttcaaggttgcaccctaacccctatgactcagcagaatct 21792295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 25602015 - 25601972
Alignment:
Q  50 tgttataaaaagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  25602015 tgttaaaaaaagggttaataggtctttaccccatgtaatatagg 25601972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 27987292 - 27987343
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||||| | |||||||  ||||| ||||||    
T  27987292 aaaaagggttaataggtctttaccccctataatataggtcattttcggtttt 27987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 28044594 - 28044645
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||||| | |||||||  ||||| ||||||    
T  28044594 aaaaagggttaataggtctttaccccctataatataggtcattttcggtttt 28044645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 32901564 - 32901497
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||||    
T  32901564 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgagtcagcagaatct 32901497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 34985380 - 34985333
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||||| |||||||  |||| |||||||    
T  34985380 agggttaataggtctttaccccctgtaatataggtcatttctggtttt 34985333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 29309563 - 29309597
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||||| |||||||    
T  29309563 aagggttaataggtctttaccccctgtaatatagg 29309597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 40702069 - 40702011
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||||||||| |||||||  | |||| |||||| ||||||||    
T  40702069 aagggttaataggcctttaccccctgtaatataggtcacttttcgttttgccccctgta 40702011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 25653699 - 25653760
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||   |||||||||||| |||||||  ||||||||||||  ||||||||    
T  25653699 aaaaagggttaatagtgttttaccccctgtaatataggtcatttttggttttcccccctgta 25653760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 27198141 - 27198190
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||| ||||||| |||||||  ||||| ||||||    
T  27198141 aaagggttaataggtctttatcccctgtaatataggtcattttcggtttt 27198190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 39513866 - 39513923
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||  |||||||||||| |||||||  | ||||||||||| ||||||||    
T  39513866 agggttaataggcatttaccccctgtaatataggtcacttttggttttgccccctgta 39513923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 43400669 - 43400722
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtccc 112  Q
    ||||||||||||||||||||||||||| ||||| |  |||| ||||||| ||||    
T  43400669 aagggttaataggtctttaccccctgtaatatatgtcatttctggttttttccc 43400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 960554 - 960522
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  960554 gggttaataggtctttaccccctgtaatatagg 960522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 3912539 - 3912491
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||| ||||||||||||||| |||||||  ||||| ||||||    
T  3912539 aagggttaataagtctttaccccctgtaatataggtcattttcggtttt 3912491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 4105340 - 4105281
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| ||||||| |||||||  |||||| ||||| ||| |||||    
T  4105340 aaaagggttaataggtcttta-cccctgtaatataggtcattttttgttttctcctctgta 4105281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 19157926 - 19157986
Alignment:
Q  57 aaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||| |  ||||||||||||| |||||||  ||||||||||||  ||||||||    
T  19157926 aaaagggttaatggtgctttaccccctgttatataggtcatttttggttttcccccctgta 19157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 27543406 - 27543458
Alignment:
Q  56 aaaaagggttaataggtcttta-ccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||| |||||||| |||||||  ||||| ||||||    
T  27543406 aaaaagggttaataggtctttacccccctgtaatataggtcattttcggtttt 27543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 27543682 - 27543650
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  27543682 gggttaataggtctttaccccctgtaatatagg 27543650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 27987584 - 27987552
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatag 92  Q
    |||||||||||||||||||||||||| ||||||    
T  27987584 agggttaataggtctttaccccctgtaatatag 27987552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 28044886 - 28044854
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatag 92  Q
    |||||||||||||||||||||||||| ||||||    
T  28044886 agggttaataggtctttaccccctgtaatatag 28044854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 28575091 - 28575027
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgat 203  Q
    ||||| |||||| ||||||||||| |||||| | ||| || |  |||||||||||||||||||||    
T  28575091 tccttataaaataaagattcttcaagattgcccactatgcactgtgactcagcagaatctttgat 28575027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 43945169 - 43945225
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| ||||| |  ||||| ||||||  ||||||||    
T  43945169 gggttaataggtctttaccccctgtaatatatgtcattttcggtttttccccctgta 43945225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 4706 - 4863
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattc 158  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| | |||||| |           ||||||| ||||||||||||||||||||    
T  4706 agggttaataggtctttacccccctgtaatatagggcacttttggttttgcctcctgtaaaaaaaaaaaattagattccgtccttgtaaaatgaagattc 4805  T
Q  159 ttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||    
T  4806 ttcacgattgccccgtaagtcaattgactcagcagaatctttgatgtggcacctacat 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 5879 - 5794
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  5879 agattccgtccttgtaaaatgaagatacttcacgattgccccctaagcccattgactcagcagaatatttgatgtggcacctacat 5794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 10615276 - 10615430
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattcttc 161  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||| |||||||| |           ||||||| |||||||||||||||||||||||    
T  10615276 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgtaaaatgaagattcttc 10615375  T
Q  162 acgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    | |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  10615376 aagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 10615430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 15086219 - 15086372
Alignment:
Q  58 aaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagat 156  Q
    ||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |           ||||||| ||||||||||||||||||    
T  15086219 aaagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaaaaaaatatttagattccgtccttgtaaaatgaagat 15086318  T
Q  157 tcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| ||| |||||||    
T  15086319 tcttcacaattgccccctaagcccattgacttagcagaatctctgaggtggcac 15086372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 46597566 - 46597417
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||| | |||||| |           ||||||| |||||||||||||||||||||    
T  46597566 agggttaataggtctttaccccctgtaatatagggcacttttggttttgcctcctgtaaaaaaatcaatttagattccgtccttgtaaaatgaagattct 46597467  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||| ||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  46597466 tcacaattgccccctaagcccattgactcagcataatctctgaggtggca 46597417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 46610009 - 46610157
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattctt 160  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||             ||||||| ||||||||||||||||||||||    
T  46610009 gggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaattttttttttttagattccgtccttgtaaaatgaagattctt 46610108  T
Q  161 cacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    || ||||||||||| |||||  |||||||||||||||  ||||||||||    
T  46610109 caagattgctccctgagccctgtgactcagcagaatcaatgatgtggca 46610157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 22256198 - 22256352
Alignment:
Q  57 aaaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaaga 155  Q
    ||||||||||||| |||||||||||| ||| ||||| |  | ||||||||||| |||||||| |           ||||||| |||||||||||||||||    
T  22256198 aaaagggttaataagtctttacccccctgtaatatatgacacttttggttttgccccctgtaaaactatttttttagattccgtccttgtaaaatgaaga 22256297  T
Q  156 ttcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    |||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||    
T  22256298 ttcttcacgattaccccctaagtccattgacttagcagaatctttgatgtggcac 22256352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 198
Target Start/End: Complemental strand, 37977572 - 37977429
Alignment:
Q  52 ttataaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatg 151  Q
    ||||| |||||||||||||||||||||||||||| |||||||  | ||||||||||| |||||||| |           ||||||| |||||||||||||    
T  37977572 ttatataaagggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaaaaaaaatt---agattccgtccttgtaaaatg 37977476  T
Q  152 aagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||    
T  37977475 aagaatcttcatgattgccccctaagcccaatgactcagcagaatct 37977429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 10616833 - 10616673
Alignment:
Q  59 aagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnn--agattccatccttgtaaaatgaaga 155  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |             ||||||| |||||||||||||||||    
T  10616833 aagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaaaaaaaaaattttagattccgtccttgtaaaatgaaga 10616734  T
Q  156 ttcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||||| |||||| |||| |||||  |||||||||||||||| ||||||||| |||||||    
T  10616733 ttcttcaagattgccccctgagccctgtgactcagcagaatctatgatgtggcgcctacat 10616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 38843529 - 38843466
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttga 202  Q
    ||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  38843529 tccttataaaatgaagattcgtcacgattgccccctaagtccattgactcagcagaatctttga 38843466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 46596094 - 46596232
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||  ||||||||||||| |||||||||| ||||||||||||||| |||| |           |||||||||| ||||||||| ||||||||    
T  46596094 agggttaatagagctttaccccctgtaatatagggtacttttggttttgtcccatgtaaaaaaaaaaacttagattccatcattgtaaaataaagattct 46596193  T
Q  160 tcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||| |||||| || | | |||  ||||||||||||||||    
T  46596194 tcaggattgccccatgacccctatgactcagcagaatct 46596232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 48044276 - 48044330
Alignment:
Q  63 gttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  48044276 gttaataggtctttaccccctgtgatatagggcacttttggttttgccccctgta 48044330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 28208132 - 28208057
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| || ||  |||||||||||||||| |||||||    
T  28208132 agattccgtccttgtaaaataaagattcttcaagattgccccctgagtcctgtgactcagcagaatctatgatgtg 28208057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 43930787 - 43930712
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||||||||||||||||| ||||||||||| |||||| |||| ||  |  |||||||||||||||| |||||||    
T  43930787 agattccatccttgtaaaataaagattcttcaagattgccccctcagttctgtgactcagcagaatctatgatgtg 43930712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 2011947 - 2011872
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||| ||||||||||||| ||||||||||| |||||  |||| | |||  |||||||||||||||| |||||||    
T  2011947 agattctatccttgtaaaataaagattcttcaggattgtcccctgaaccctatgactcagcagaatctatgatgtg 2011872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2302514 - 2302573
Alignment:
Q  1 gctaaaaatcatgaaacaagtacgttaaacatgttacctgtatatccattgttataaaaa 60  Q
    ||||||||||||||||||||||| || || ||||||||  |||||||||| |||||||||    
T  2302514 gctaaaaatcatgaaacaagtacatttaatatgttacccatatatccattattataaaaa 2302573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 15093700 - 15093633
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||||||||||| ||||||||||| |||||| |||| | |||  ||||||| ||||||||    
T  15093700 agattccatccttgtaaaataaagattcttcaggattgccccctgacccctatgactcaacagaatct 15093633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 16386578 - 16386511
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||||||||||||||||    
T  16386578 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatct 16386511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 24842891 - 24842958
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||||||||||||||||    
T  24842891 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatct 24842958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 48288348 - 48288269
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| |||||||||||| ||||||||||| ||| ||  ||| |||||  ||||||| |||||||| |||||||||||    
T  48288348 agattccgtccttgtaaaataaagattcttcaggatcgcctcctgagccctgtgactcaacagaatctatgatgtggcac 48288269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 51116289 - 51116360
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    |||||||||||| |||||||||||   || | |||||| |||||| |||||||||||||||||| |||||||    
T  51116289 tccttgtaaaataaagattcttcagattttccccctaaacccattaactcagcagaatctttgacgtggcac 51116360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 7248863 - 7248921
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||||||||| ||||||   ||||||||||||| ||||||||    
T  7248863 aagggttaataggcctttaccccctgtaatatagatcatttttggttttgccccctgta 7248921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 18142256 - 18142198
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||||||||| |||||||  | ||||||||||| ||||||||    
T  18142256 aagggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgta 18142198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 54567800 - 54567747
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccct 114  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||||| |||||    
T  54567800 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccct 54567747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 20957228 - 20957180
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||||| ||||||  ||||||| |||||    
T  20957228 aagggttaataggtctttaccccctgtaatatagattattttttgtttt 20957180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 27521521 - 27521577
Alignment:
Q  62 ggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||  ||||||||    
T  27521521 ggttaataggtctttacccccgtgtaatataggttatttttggttttcccccctgta 27521577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 28207059 - 28207123
Alignment:
Q  142 ttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||| | |||||||    
T  28207059 ttgtaaaataaagattcttcaagattgccccctgagccctgtgactcagcagaatatatgatgtg 28207123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 31172299 - 31172355
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||| ||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  31172299 gggttaataggcctttaccacctgtaatataggtcatttttggttttgtctcctgta 31172355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 47115619 - 47115563
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||| |||||||  ||||| |||||| ||| |||||    
T  47115619 gggttaataggtctttaccccctgtaatataggtcattttcggttttctcctctgta 47115563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 51252349 - 51252285
Alignment:
Q  54 ataaaaagggttaataggtcttta-ccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||||||||| |||||||| |||||||  |||| |||||||  ||||||||    
T  51252349 ataaaaagggttaataggtctttatccccctgtaatataggtcatttctggttttcccccctgta 51252285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 51460822 - 51460774
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  51460822 aagggttaataggtctttaccccctgtaatataggtcattttttgtttt 51460774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 52396428 - 52396360
Alignment:
Q  137 catccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgt 205  Q
    ||||||| |||||| ||||||||||| |||||| || || ||||  |||||||||| ||||||||||||    
T  52396428 catccttataaaataaagattcttcaagattgccccttatgccctgtgactcagcaaaatctttgatgt 52396360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 2011134 - 2011201
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    |||||||||||| ||||||||||| |||||| | ||| |||   |||||||||||||| |||||||||    
T  2011134 tccttgtaaaataaagattcttcaggattgccctctatgccttgtgactcagcagaatatttgatgtg 2011201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 23539334 - 23539401
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||| ||||||||||||||||| | |||||| |||||| |   |||| ||||||||||||    
T  23539334 agattccatcctcgtaaaatgaagattctttaggattgccccctaacctagttgagtcagcagaatct 23539401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 27315272 - 27315331
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||||| |||||| |||| |||||| |||| | |||| ||||||||||||||||    
T  27315272 tccttgtaaaataaagatttttcaggattgccccctgatcccaatgactcagcagaatct 27315331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 29313789 - 29313844
Alignment:
Q  62 ggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||| ||||| |||||||  ||||| |||||| |||||||||    
T  29313789 ggttaataggtctttacctcctgtaatataggtcattttcggttttctcccctgta 29313844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 18140938 - 18140996
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||| ||||||||||||| |||||||  | |||||||||||  |||||||    
T  18140938 aagggttaataggcctttaccccctgtaatataggtcacttttggttttgctccctgta 18140996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 26927507 - 26927557
Alignment:
Q  58 aaagggttaataggtctttacccc-ctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||||||| || | ||||||| |||||||||||||    
T  26927507 aaagggttaataggtctttacccctctataatataggttatttttggtttt 26927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 51252049 - 51252095
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||| |||||| ||||||| ||||| |||||||    
T  51252049 gggttaataggtctttactccctgtaatataggttatttctggtttt 51252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 6510214 - 6510247
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  6510214 agggttaataggtctttaccccctgtaatatagg 6510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 15093772 - 15093715
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||  ||||||||||| | |||||||||| ||||| ||||| ||||||||    
T  15093772 agggttaatagaactttaccccctataatatagggtacttttgattttgccccctgta 15093715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 24528391 - 24528443
Alignment:
Q  64 ttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||| ||||||||| ||| ||||||  |||||||||||||||||||||||    
T  24528391 ttaatagggctttacccc-tgtaatatagattatttttggttttgtcccctgta 24528443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 24528548 - 24528471
Alignment:
Q  132 gattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    |||||| |||| ||||||| || |||||| | |||||  |||| |||||  |||||||||||||||| ||||||||||    
T  24528548 gattccgtcctcgtaaaataaatattctttaagattgtcccctgagccctatgactcagcagaatctctgatgtggca 24528471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 27497796 - 27497829
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatata 91  Q
    |||||||||||||||||||||||||||| |||||    
T  27497796 aaagggttaataggtctttaccccctgtaatata 27497829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 27760286 - 27760335
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||| ||||||||||||||| |||||||  |||| |||||||    
T  27760286 aaagggttaataagtctttaccccctgtaatataggtcatttctggtttt 27760335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 49873007 - 49872974
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  49873007 agggttaataggtctttaccccctgtaatatagg 49872974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 25110120 - 25110072
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    |||||||||||||||||||| |||||| |||||||  ||||| ||||||    
T  25110120 aagggttaataggtctttacaccctgtaatataggtcattttcggtttt 25110072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 49880794 - 49880762
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  49880794 gggttaataggtctttaccccctgtaatatagg 49880762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 55 - 210
Target Start/End: Original strand, 10074 - 10229
Alignment:
Q  55 taaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaag 154  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||| |||||| |||||||| |           ||||||  ||||||||||||||||    
T  10074 taaaaagggttaataggtctttaccccctgtaatatagggcacttttagttttgccccctgtaaaaaaaaaaaattagattcagtccttgtaaaatgaag 10173  T
Q  155 attcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||||| ||||| |||||| ||||||||||||||| ||||| ||| |||||||    
T  10174 attcttcacaattgccccctaatcccattgactcagcaaaatctctgaggtggcac 10229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 11555 - 11488
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||| | |||  ||||||||||||||||    
T  11555 agattccgtccttgtaaaataaagattcttcaggattgccccctgacccctatgactcagcagaatct 11488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 8153 - 8232
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  8153 agattccgtccttgtaaaatgaagatttttcacgattgccccctaagcccattgactcagcagaatctctgaggtggcac 8232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 15735 - 15814
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  15735 agattccgtccttgtaaaatgaagatttttcacgattgccccctaagcccattgactcagcagaatctctgaggtggcac 15814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 25687 - 25766
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcac 210  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  25687 agattccgtccttgtaaaatgaagatttttcacgattgccccctaagcccattgactcagcagaatctctgaggtggcac 25766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 66029 - 65962
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  66029 agattccgtccttgtaaaatgaagattcttcacgattgccccctaagcccattgactcagcagaatct 65962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 64496 - 64640
Alignment:
Q  54 ataaaaagggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatga 152  Q
    |||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||| |           ||||| | |||||||||||| |    
T  64496 ataaaatgggttaataggtctttacccccctgtaatatagggtacttttggttttgccccctgta-atttttttttttagatttcgtccttgtaaaataa 64594  T
Q  153 agattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||||| |||||| |||| | |||  ||||||||||||||||    
T  64595 agattcttcaggattgccccctgacccctgtgactcagcagaatct 64640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 15947 - 16030
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
    ||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||| || ||||| |||||||||||||||||    
T  15947 attccgtccttgtaaaatgaagattcttcgagattgccccctaagcccattgactcaacaaaatctatgatgtggcacctacat 16030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 17513 - 17381
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatccttgtaaaatgaagattct 159  Q
    |||||||||||||| ||| || |||| |||||||||| |||||||||||||| |||||             | ||||| |||||||||||||||||||||    
T  17513 agggttaataggtcattatcctctgtaatatagggtacttttggttttgtcctctgtaattttttttttttaaattccgtccttgtaaaatgaagattct 17414  T
Q  160 tcacgattgctccctaagcccattgactcagca 192  Q
    |||||||||| ||||||||||| ||||||||||    
T  17413 tcacgattgccccctaagcccaatgactcagca 17381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 15871 - 15928
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||||||||| ||||||| ||||| |  | |||| |||||||||||||||    
T  15871 agggttaataggtctttatcccctgtaatatatgacactttttgttttgtcccctgta 15928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 346 - 195
Alignment:
Q  60 agggttaataggtctttaccccc-tgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnn-agattccatccttgtaaaatgaagatt 157  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |            ||||||| ||||| |||||||||||||    
T  346 agggttaataggtctttacccccatgtaatatagggcacttttggttttgccccctgtaaaaagtttttttttagattccgtccttataaaatgaagatt 247  T
Q  158 cttcacgattgctccctaagcccattgactcagcagaatctttgatgtggca 209  Q
    ||||| |||||| |||| ||||| ||||||||||||||||| ||||||||||    
T  246 cttcaagattgccccctgagccctttgactcagcagaatctatgatgtggca 195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 20910 - 20985
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtg 206  Q
    ||||||| ||||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| |||||||    
T  20910 agattccgtccttgtaaaatgaagaattttcacgattgccccctaagtctattgactcagcagaatctctgatgtg 20985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 2728 - 2889
Alignment:
Q  56 aaaaagggttaataggtctttac-cccctgtgatatagggtatttttggttttgtcccctgtatannnnnnnnnnnagattccatcc-ttgtaaaatgaa 153  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| | |||||| |           ||||||| ||| ||||||| ||||    
T  2728 aaaaagggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaatttttttttttagattccgtcccttgtaaa-tgaa 2826  T
Q  154 gattcttcacgattgctccctaagcccattgactcagcagaatctttgatgtggcacctacat 216  Q
     |||||||| |||||| |||| |||||  |||||||||||||||| |||| ||||||||||||    
T  2827 aattcttcaagattgccccctgagccccgtgactcagcagaatctatgatatggcacctacat 2889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 116 - 183
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||||||||||||||||    
T  116 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatct 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1147 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 2531 - 2598
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||||||||||||||||    
T  2531 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatct 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 3912 - 3970
Alignment:
Q  59 aagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||||| || ||||  | ||||||||||| ||||||||    
T  3912 aagggttaataggtctttaccccctgtaatgtaggacacttttggttttgccccctgta 3970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 9915 - 9976
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||   ||||||||||||| |||||||||| ||||||||||  ||||||||    
T  9915 aaaaagggttaataaaactttaccccctgtaatatagggtacttttggttttcacccctgta 9976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 36140 - 36201
Alignment:
Q  139 tccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatcttt 200  Q
    |||||||||||| |||||| |||| |||||| |||||| |||  ||||||||||||||||||    
T  36140 tccttgtaaaataaagatttttcaggattgccccctaacccctatgactcagcagaatcttt 36201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 91045 - 91082
Alignment:
Q  56 aaaaagggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||||||| |||||||    
T  91045 aaaaagggttaataggtctttaccccctgtaatatagg 91082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0850
Description:

Target: scaffold0850; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 1522 - 1590
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatctt 199  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| |||||||||||||    
T  1522 agattccacccttgaaaaatgaagattcttcaggattgacccctcaccccaatgagtcagcagaatctt 1590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 4631 - 4564
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||||    
T  4631 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgagtcagcagaatct 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 1536 - 1469
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    |||||||| ||||| ||||||||||||||||| |||||  |||| | |||| ||| ||||||||||||    
T  1536 agattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgagtcagcagaatct 1469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 9034 - 8967
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||| |||||||||||| ||||||||||| ||||||  ||||| |||  |||||||||| |||||    
T  9034 agattccgtccttgtaaaataaagattcttcaggattgcctcctaacccctatgactcagcaaaatct 8967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 2741 - 2797
Alignment:
Q  142 ttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||||| |||||| |||| |||||| |||||| |||  ||||||||||||||||    
T  2741 ttgtaaaataaagattattcaggattgccccctaatccctatgactcagcagaatct 2797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 7364 - 7420
Alignment:
Q  142 ttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||||||| |||||| |||| |||||| |||||| |||  ||||||||||||||||    
T  7364 ttgtaaaataaagattattcaggattgccccctaatccctatgactcagcagaatct 7420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 26308 - 26354
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  26308 gggttaataggtctttaccccctgtaatataggtcattttcggtttt 26354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 4209 - 4176
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagg 93  Q
    |||||||||||||||||||||||||| |||||||    
T  4209 agggttaataggtctttaccccctgtaatatagg 4176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 4246 - 4295
Alignment:
Q  58 aaagggttaataggtctttaccccctgtgatatagggtatttttggtttt 107  Q
    ||||||||||||||||||||| |||||| |||||||  |||| |||||||    
T  4246 aaagggttaataggtctttactccctgtaatataggtcatttatggtttt 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 4484 - 4439
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttt 106  Q
    ||||||||||||||||||||||||| |||||||  ||||| |||||    
T  4484 gggttaataggtctttaccccctgtaatataggtcattttcggttt 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 24922 - 24857
Alignment:
Q  133 attccatccttgtaaaatgaagattcttcacgattgctccctaagcccattgactcagcagaatct 198  Q
    ||||| |||||||||||| ||||||||||| |||||| |||| | |||  |||||||||| |||||    
T  24922 attccgtccttgtaaaataaagattcttcaggattgccccctgacccctatgactcagcaaaatct 24857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 694 - 637
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| |||| |||||||  |||| |||||||  ||||||||    
T  694 agggttaataggtctttaccctctgtaatataggtcatttatggttttcccccctgta 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 35598 - 35655
Alignment:
Q  60 agggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||||||   |||||||  | ||||||||||| ||||||||    
T  35598 agggttaataggtctttaccccctaaaatataggtcacttttggttttgccccctgta 35655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 37378 - 37333
Alignment:
Q  131 agattccatccttgtaaaatgaagattcttcacgattgctccctaa 176  Q
    ||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  37378 agattccgtccttgtaaaataaagattcttcaggattgccccctaa 37333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1122
Description:

Target: scaffold1122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 292 - 348
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    |||||||||||| |||||| ||||  ||||||| ||||||| ||||| |||||||||    
T  292 gggttaataggtttttacctcctgcaatataggttattttttgttttctcccctgta 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 34883 - 34851
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  34883 gggttaataggtctttaccccctgtaatatagg 34851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 1827 - 1859
Alignment:
Q  61 gggttaataggtctttaccccctgtgatatagg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  1827 gggttaataggtctttaccccctgtaatatagg 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 2120 - 2060
Alignment:
Q  58 aaagggttaataggtctttac-cccctgtgatatagggtatttttggttttgtcccctgta 117  Q
    ||||||||||||||||||||| ||||||| |||||||  |||| |||||||  ||||||||    
T  2120 aaagggttaataggtctttacccccctgtaatataggtcatttctggttttcacccctgta 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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