View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0957_high_15 (Length: 269)
Name: NF0957_high_15
Description: NF0957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0957_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 16910477 - 16910217
Alignment:
| Q |
1 |
aaattgatttgtcacgatgagacagaactgaaaacacaaattgattataattcggtaagccacgagcgaatactgaattattcaatgcaagagtcgtgac |
100 |
Q |
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| T |
16910477 |
aaattgatttgtcacgatgagacagaactgaaaacacaaattgattataattgggtaagccacgagcgaatactgaattattcaatgcaagagtagtgac |
16910378 |
T |
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| Q |
101 |
tcttcgccaaagtgtcttccatctagtagacaatacacaagtttgaacaacttgttttgtgtccataaacttcatcatattgagcaaaacagaatcacac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
16910377 |
tcttcgccaaagtgtcttccatctagtagacaatacacaagtttgaacaacttgttttgtgtccataaacttcattatattgagcaaaacagaatcacac |
16910278 |
T |
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| Q |
201 |
aagtcactaagccggtctttttctatttctttttcatctcttttactcttcatcctttgct |
261 |
Q |
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|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
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| T |
16910277 |
aagtcactaagccggtctttttctctttcttttttatctcttttactcttcatcctttgct |
16910217 |
T |
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