View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0957_low_12 (Length: 353)
Name: NF0957_low_12
Description: NF0957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0957_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 10 - 286
Target Start/End: Original strand, 39107322 - 39107598
Alignment:
| Q |
10 |
aagaatataaaacaaaaataatatctttgtgattgcnnnnnnngagcaatggaagattctcatcctctattgagaggaggtagaggaaaagagaaaggtt |
109 |
Q |
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| T |
39107322 |
aagaatacaaaacaaaaataatatctttgtgattgcaaaaaaagagcaatggaagattctcatcctctattgagaggaggtagaggaaaagagaaaggtt |
39107421 |
T |
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| Q |
110 |
atagccacggatttttaacctctcagatgcatgtattggcttccatatgtgacaccctttttccatccattccattaaacaaagaagtctctcaagatga |
209 |
Q |
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| T |
39107422 |
atagccatggatttttaacctctcagatgcatgtattggcttccatatgtgacaccctttttccatccattccattaaacaaagaagtctctcaagatga |
39107521 |
T |
|
| Q |
210 |
aaacctctcatccttctattcaacttctggttctcagttcccatttcctgatgaggttctttttccaccaaatttat |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39107522 |
aaacctctcatccttctattcaacttctggttctcagttcccatttcctgatgaggttctttttccaccaaatttat |
39107598 |
T |
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