View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0957_low_14 (Length: 347)
Name: NF0957_low_14
Description: NF0957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0957_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 103 - 324
Target Start/End: Original strand, 5231593 - 5231814
Alignment:
| Q |
103 |
aaaactgtagttttcaacacggcaacggtaacacaagataatagaatatgttaaataagtttgtatttaccacgttagatgtttttcgaagtgtgaacat |
202 |
Q |
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| T |
5231593 |
aaaactgtagttttcaacacggcaacggtaacacaagataatagaatatgttaaataagtttgtatttaccacgttagatgtttttcgaagtgtgaacat |
5231692 |
T |
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| Q |
203 |
ttataaaattttaccaatgtcatgcaggttaatggacatagcttccataaaaggatgactcccgtggagactacatttgattggcagtcatacagtgaag |
302 |
Q |
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| T |
5231693 |
ttataaaattttaccaatgtcatgtaggttaatggacatagcttccataaaaggatgactcccgtggagactacatttgattggcagtcatacagtgaag |
5231792 |
T |
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| Q |
303 |
agcctgcctactccagtgatga |
324 |
Q |
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| T |
5231793 |
agcctgcctactccagtgatga |
5231814 |
T |
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