View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0957_low_31 (Length: 241)

Name: NF0957_low_31
Description: NF0957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0957_low_31
NF0957_low_31
[»] chr4 (15 HSPs)
chr4 (17-154)||(17145776-17145913)
chr4 (17-154)||(8374508-8374645)
chr4 (17-154)||(18248218-18248355)
chr4 (17-154)||(15287364-15287501)
chr4 (17-154)||(15294473-15294610)
chr4 (17-148)||(15675221-15675352)
chr4 (17-139)||(19020486-19020608)
chr4 (17-154)||(31115629-31115766)
chr4 (81-148)||(10104382-10104449)
chr4 (17-70)||(22352249-22352302)
chr4 (17-139)||(18168970-18169092)
chr4 (17-70)||(26339020-26339073)
chr4 (81-154)||(40885680-40885753)
chr4 (17-58)||(22738269-22738310)
chr4 (63-139)||(15044873-15044949)
[»] chr5 (21 HSPs)
chr5 (17-154)||(11212184-11212321)
chr5 (17-137)||(35791235-35791355)
chr5 (17-140)||(32950693-32950816)
chr5 (17-139)||(7425324-7425446)
chr5 (17-148)||(22053965-22054096)
chr5 (17-139)||(1219654-1219776)
chr5 (17-147)||(18531200-18531330)
chr5 (17-139)||(22883218-22883340)
chr5 (17-119)||(35582036-35582138)
chr5 (17-119)||(36989924-36990026)
chr5 (17-119)||(21932535-21932637)
chr5 (17-119)||(21938705-21938807)
chr5 (17-154)||(17471707-17471844)
chr5 (17-70)||(23328558-23328611)
chr5 (19-70)||(24616165-24616216)
chr5 (19-70)||(24712541-24712592)
chr5 (19-70)||(24745559-24745610)
chr5 (85-129)||(4200125-4200169)
chr5 (63-139)||(7728465-7728541)
chr5 (81-129)||(21617079-21617127)
chr5 (63-139)||(23493964-23494040)
[»] chr3 (20 HSPs)
chr3 (17-137)||(12264929-12265049)
chr3 (17-154)||(44228985-44229122)
chr3 (23-148)||(11986299-11986424)
chr3 (93-154)||(54651533-54651594)
chr3 (17-140)||(18897132-18897255)
chr3 (17-139)||(49232436-49232558)
chr3 (21-156)||(5228317-5228452)
chr3 (17-139)||(1467873-1467995)
chr3 (17-134)||(12902229-12902346)
chr3 (17-154)||(15468459-15468596)
chr3 (17-126)||(47984650-47984759)
chr3 (17-126)||(48003224-48003333)
chr3 (17-139)||(25058739-25058861)
chr3 (17-154)||(22275209-22275346)
chr3 (17-126)||(47993937-47994046)
chr3 (17-126)||(48012510-48012619)
chr3 (64-148)||(15859156-15859240)
chr3 (81-154)||(1990866-1990939)
chr3 (64-148)||(15936759-15936843)
chr3 (64-148)||(15938601-15938685)
[»] scaffold0066 (3 HSPs)
scaffold0066 (17-150)||(54416-54549)
scaffold0066 (63-150)||(45076-45163)
scaffold0066 (17-58)||(45011-45052)
[»] scaffold0191 (1 HSPs)
scaffold0191 (17-154)||(7575-7712)
[»] chr2 (15 HSPs)
chr2 (17-154)||(21141895-21142032)
chr2 (17-139)||(12728392-12728514)
chr2 (17-139)||(34824475-34824597)
chr2 (17-154)||(23778164-23778301)
chr2 (17-139)||(16935593-16935715)
chr2 (17-139)||(17006253-17006375)
chr2 (17-70)||(5888832-5888885)
chr2 (17-139)||(11231472-11231594)
chr2 (17-148)||(24341521-24341652)
chr2 (17-148)||(25265522-25265653)
chr2 (17-119)||(22513339-22513441)
chr2 (17-119)||(28775961-28776063)
chr2 (17-70)||(23774137-23774190)
chr2 (17-119)||(24685935-24686037)
chr2 (63-148)||(36982573-36982658)
[»] chr8 (11 HSPs)
chr8 (17-137)||(16195230-16195350)
chr8 (17-139)||(13662399-13662521)
chr8 (17-139)||(22006392-22006514)
chr8 (17-139)||(15319293-15319415)
chr8 (17-139)||(15499662-15499784)
chr8 (17-139)||(22088928-22089050)
chr8 (17-119)||(271514-271616)
chr8 (17-119)||(644304-644406)
chr8 (17-119)||(830039-830141)
chr8 (81-145)||(38533712-38533776)
chr8 (81-129)||(5854677-5854725)
[»] scaffold0012 (1 HSPs)
scaffold0012 (17-153)||(34278-34414)
[»] scaffold0084 (1 HSPs)
scaffold0084 (34-140)||(56240-56346)
[»] chr6 (14 HSPs)
chr6 (17-154)||(1556005-1556142)
chr6 (17-139)||(19610018-19610140)
chr6 (17-148)||(27740838-27740969)
chr6 (81-150)||(29665937-29666006)
chr6 (17-139)||(16376507-16376629)
chr6 (17-139)||(16383831-16383953)
chr6 (17-139)||(16556273-16556395)
chr6 (17-139)||(16632829-16632951)
chr6 (17-119)||(22225892-22225994)
chr6 (17-119)||(10488699-10488801)
chr6 (17-148)||(35009571-35009702)
chr6 (63-139)||(18398983-18399059)
chr6 (61-139)||(25367363-25367441)
chr6 (17-70)||(29869978-29870031)
[»] scaffold0467 (1 HSPs)
scaffold0467 (17-154)||(10458-10595)
[»] scaffold0383 (1 HSPs)
scaffold0383 (17-154)||(2392-2529)
[»] chr7 (15 HSPs)
chr7 (17-154)||(15760233-15760370)
chr7 (17-70)||(16418498-16418551)
chr7 (17-139)||(15950925-15951047)
chr7 (17-119)||(7822728-7822830)
chr7 (17-119)||(7830039-7830141)
chr7 (17-55)||(15852456-15852494)
chr7 (17-119)||(27101791-27101893)
chr7 (17-119)||(27109139-27109241)
chr7 (17-119)||(27176433-27176535)
chr7 (17-119)||(38783883-38783985)
chr7 (17-70)||(10000572-10000625)
chr7 (41-148)||(13321038-13321146)
chr7 (63-108)||(296139-296184)
chr7 (17-147)||(47481164-47481294)
chr7 (81-145)||(15368411-15368475)
[»] chr1 (7 HSPs)
chr1 (22-139)||(46523394-46523511)
chr1 (17-139)||(18059892-18060014)
chr1 (17-70)||(20254312-20254365)
chr1 (17-139)||(38055225-38055347)
chr1 (17-119)||(17004638-17004740)
chr1 (17-70)||(22035448-22035501)
chr1 (17-70)||(7641136-7641189)
[»] scaffold0025 (1 HSPs)
scaffold0025 (17-148)||(8849-8980)
[»] scaffold0107 (2 HSPs)
scaffold0107 (17-139)||(39646-39768)
scaffold0107 (17-119)||(31309-31411)
[»] scaffold1666 (1 HSPs)
scaffold1666 (17-154)||(115-252)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-70)||(7210-7263)
[»] scaffold0023 (1 HSPs)
scaffold0023 (17-139)||(154141-154263)
[»] scaffold0195 (2 HSPs)
scaffold0195 (17-148)||(19206-19337)
scaffold0195 (17-148)||(21290-21421)
[»] scaffold0213 (1 HSPs)
scaffold0213 (17-139)||(29162-29284)
[»] scaffold0076 (1 HSPs)
scaffold0076 (17-119)||(39103-39205)
[»] scaffold0761 (1 HSPs)
scaffold0761 (17-154)||(1694-1831)
[»] scaffold0132 (1 HSPs)
scaffold0132 (17-148)||(13506-13637)
[»] scaffold0151 (1 HSPs)
scaffold0151 (63-145)||(22542-22624)
[»] scaffold0125 (1 HSPs)
scaffold0125 (17-147)||(41648-41778)
[»] scaffold0183 (1 HSPs)
scaffold0183 (17-70)||(6598-6651)
[»] scaffold0155 (1 HSPs)
scaffold0155 (17-70)||(23951-24004)
[»] scaffold0529 (1 HSPs)
scaffold0529 (96-148)||(3042-3094)
[»] scaffold0075 (1 HSPs)
scaffold0075 (17-140)||(34600-34724)
[»] scaffold0026 (1 HSPs)
scaffold0026 (17-148)||(107747-107878)
[»] scaffold0009 (1 HSPs)
scaffold0009 (81-139)||(69520-69578)
[»] scaffold0892 (1 HSPs)
scaffold0892 (35-154)||(3432-3551)
[»] scaffold0053 (1 HSPs)
scaffold0053 (31-139)||(76973-77081)
[»] scaffold0006 (1 HSPs)
scaffold0006 (81-129)||(197389-197437)


Alignment Details
Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 17145913 - 17145776
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17145913 catcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 17145814  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17145813 caacaacaacatatcaaaattcactaattgagtataat 17145776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 8374508 - 8374645
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8374508 catcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 8374607  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8374608 caacaacaacatattaaaattcactaattgagtataat 8374645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 18248218 - 18248355
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18248218 catcatcaatcgataattatgtataccaaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 18248317  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18248318 caacaacaacatattaaaattcactaattgagtataat 18248355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15287501 - 15287364
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  15287501 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15287402  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  ||| |||||||||    
T  15287401 caatcaaaacatatcaaatttcatcaatggagtataat 15287364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15294610 - 15294473
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  15294610 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15294511  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  ||| |||||||||    
T  15294510 caatcaaaacatatcaaatttcatcaatggagtataat 15294473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 15675352 - 15675221
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | ||||||||||||||  || |||||   | |||||||||| |||| | ||| ||||||| | |||||||||||| |||||| ||    
T  15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| || |||||||||| |||||||    
T  15675252 caacaacaacttagcaaaattcaccaattgag 15675221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 19020486 - 19020608
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||| ||| |||| |||||| || || | |||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  19020486 catcatcaatccacaattaagtatactcaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 19020585  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  19020586 caatcaaaacatatcaaatttca 19020608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 31115629 - 31115766
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | ||||||||||||||  || |||||   | |||||||||| |||| | ||| ||||||| | |||||||||||| |||||| ||    
T  31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||||||||| ||  ||||||||| ||||||| |||||    
T  31115729 caacaacaacttaggaaaattcaccaattgagcataat 31115766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 10104449 - 10104382
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||||| | |||||||||||| |||||| |||||||||||| || |||||||||| |||||||    
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgag 10104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 22352302 - 22352249
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||||||||| |||||||||||| ||||||||| || ||||||||    
T  22352302 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 22352249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 18168970 - 18169092
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| || ||||| ||||| |||| |||| |||||| || || | ||| | |||| |  ||| |||||| ||||| ||||||||||||||||||    
T  18168970 catcatcaattcacaattaagtatatccaaatcatgattcactcacaatagcattatttaacaataaccacatcaatggaatatgaatcacatctcattt 18169069  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  18169070 caatcaaaacatatcaaatttca 18169092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 26339020 - 26339073
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    |||||| |||||||||||| |||||||||||| ||||||||| || ||||||||    
T  26339020 catcattaatccataattaagtatacccaagttataattcactcacaacaacat 26339073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 40885753 - 40885680
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgagtataat 154  Q
    ||||||||||| | |||||||||||| |||||| |||||||| ||| || |||| ||||| ||||||| |||||    
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataat 40885680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 22738269 - 22738310
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcac 58  Q
    |||||| |||||| ||||| ||||||||||||||||||||||    
T  22738269 catcattaatccacaattaagtatacccaagtcataattcac 22738310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 15044873 - 15044949
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattca 139  Q
    |||||||||| |||  | ||||||||||| | |||||||||||  ||| || ||||||||||||||| || ||||||    
T  15044873 aacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattca 15044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 11212321 - 11212184
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11212321 catcatcaatccataattatgtatacccaagtcataatccacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 11212222  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  11212221 caacaacaacatattaaaattcactacttgagtataat 11212184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 35791355 - 35791235
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35791355 catcatcaatccataattatgtatacccaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 35791256  T
Q  117 caacaacaacatatcaaaatt 137  Q
    |||||||||||||||||||||    
T  35791255 caacaacaacatatcaaaatt 35791235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 32950693 - 32950816
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||| ||||||||| | |||| | ||||||||||| |||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||| |||    
T  32950693 catcttcaatccatgaatatgcagacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatctctttt 32950792  T
Q  117 caacaacaacatatcaaaattcac 140  Q
    |||||||||||||  |||||||||    
T  32950793 caacaacaacatagtaaaattcac 32950816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 7425324 - 7425446
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||||||||| ||||| ||||||||| |||||| || |||| |||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  7425324 catcatcaatccataattaagtatatccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 7425423  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  7425424 caatcaaaacatatcaaatttca 7425446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 22054096 - 22053965
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||||| |||||||  || |||||   | |||||||||| |||| ||||| ||||||| | |||||||||||| |||||| ||    
T  22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| || |||||||||| |||||||    
T  22053996 caacaacaacttagcaaaattcaccaattgag 22053965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 1219776 - 1219654
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  ||| |||||| || || ||||||||||||||||||    
T  1219776 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatgaaatatgaatcacatctcattt 1219677  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  1219676 caatcaaaacatatcaaatttca 1219654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 18531330 - 18531200
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | ||||||||||| ||  || |||||   | |||||||||| |||| ||||| ||||||| | |||||||||||| |||||| ||    
T  18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
Q  117 caacaacaacatatcaaaattcactaattga 147  Q
    |||||||||| || |||||||||| ||||||    
T  18531230 caacaacaacttagcaaaattcaccaattga 18531200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 22883340 - 22883218
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  22883340 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 22883241  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  22883240 caatcaaaacatatcaaatttca 22883218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 35582036 - 35582138
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  35582036 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 35582135  T
Q  117 caa 119  Q
    |||    
T  35582136 caa 35582138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 36990026 - 36989924
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  36990026 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 36989927  T
Q  117 caa 119  Q
    |||    
T  36989926 caa 36989924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 21932637 - 21932535
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | ||   |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  21932637 catcatcaatccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 21932538  T
Q  117 caa 119  Q
    |||    
T  21932537 caa 21932535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 21938807 - 21938705
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | ||   |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  21938807 catcatcaatccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 21938708  T
Q  117 caa 119  Q
    |||    
T  21938707 caa 21938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 17471844 - 17471707
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | ||||  ||||||||  || |||||  || || |||||||||||| |  |||||||||| ||||| |||||| |||||| ||||    
T  17471844 catcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatcttattt 17471745  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  17471744 caatcaaaacatatcaaatttcatcaattaagtataat 17471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 23328558 - 23328611
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || ||||||||    
T  23328558 catcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 23328611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 24616165 - 24616216
Alignment:
Q  19 tcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||| ||||| |||||||||||| ||||||||| || ||||||||    
T  24616165 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24616216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 24712541 - 24712592
Alignment:
Q  19 tcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||| ||||| |||||||||||| ||||||||| || ||||||||    
T  24712541 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24712592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 24745559 - 24745610
Alignment:
Q  19 tcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||| ||||| |||||||||||| ||||||||| || ||||||||    
T  24745559 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24745610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 4200169 - 4200125
Alignment:
Q  85 aacatcattggaacatgaatcacatctcatttcaacaacaacata 129  Q
    ||||||| | |||||||||||||||||||  ||||||||||||||    
T  4200169 aacatcaattgaacatgaatcacatctcaaatcaacaacaacata 4200125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 7728465 - 7728541
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattca 139  Q
    |||||||||| |||  | ||||||||||| | |||||||||||  ||| || ||||||||||||||| || ||||||    
T  7728465 aacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattca 7728541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 21617079 - 21617127
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacata 129  Q
    ||||||||||| | ||||||||||| |||| || |||||||||||||||    
T  21617079 caacaacatcaattgaacatgaatctcatcacaattcaacaacaacata 21617127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 23493964 - 23494040
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattca 139  Q
    |||||||||| |||  | ||||||||||| | |||||||||||  ||| || ||||||||||||||| || ||||||    
T  23493964 aacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattca 23494040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 12265049 - 12264929
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12265049 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 12264950  T
Q  117 caacaacaacatatcaaaatt 137  Q
    |||||||||||||||||||||    
T  12264949 caacaacaacatatcaaaatt 12264929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 44228985 - 44229122
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  44228985 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataaccttaatggaacatgaatcacatctcattt 44229084  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
     |||||||||||||||| ||||||||||||||||||||    
T  44229085 taacaacaacatatcaagattcactaattgagtataat 44229122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 11986424 - 11986299
Alignment:
Q  23 caatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaa 122  Q
    |||||||| | |||| ||||||||||||| |||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||    
T  11986424 caatccatgaatatgcatacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaa 11986325  T
Q  123 caacatatcaaaattcactaattgag 148  Q
    |||| || |||||||||||| |||||    
T  11986324 caacttagcaaaattcactatttgag 11986299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 54651533 - 54651594
Alignment:
Q  93 tggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54651533 tggaacatgaattacatctcatttcaacaacaacatatcaaaattcaccaattgagtataat 54651594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 18897255 - 18897132
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  18897255 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 18897156  T
Q  117 caacaacaacatatcaaaattcac 140  Q
    |||  | ||||||||||| |||||    
T  18897155 caatcaaaacatatcaaatttcac 18897132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 49232436 - 49232558
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||||| ||||| ||||||||||||||||||    
T  49232436 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 49232535  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  49232536 caatcaaaacatatcaaatttca 49232558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 5228317 - 5228452
Alignment:
Q  21 atcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaac 120  Q
    |||||| || ||||| |||||||||| |||| |||||| || || | |||||||||| |  |||||||||| ||||| |||||| ||| ||||||||||     
T  5228317 atcaattcacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacacctcatttcaat 5228416  T
Q  121 aacaacatatcaaaattcactaattgagtataatct 156  Q
     | ||||||||||| ||||  |||| ||||||||||    
T  5228417 caaaacatatcaaatttcatcaattaagtataatct 5228452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 1467995 - 1467873
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  1467995 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 1467896  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  1467895 caatcaaaacatatcaaatttca 1467873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 12902346 - 12902229
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||| |||||| ||||| ||||| |||| |||| |||||| || || |  |||||||||||  |||||||||| ||||| |||||| |||||||||||    
T  12902346 catcattaatccacaattaagtatatccaaatcatgattcactcacaatagtatcagttaataataacaacatcaatggaatatgaattacatctcattt 12902247  T
Q  117 caacaacaacatatcaaa 134  Q
    |||  | |||||||||||    
T  12902246 caatcaaaacatatcaaa 12902229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15468596 - 15468459
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| |||||||||  || |||||  || || |||||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  15468596 catcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15468497  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  15468496 caatcaaaacatatcaaatttcatcaattaagtataat 15468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||||||||||| |||||   | |||||||||| |||| | ||| ||||||| | ||||||||||||||||||| |     
T  47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
Q  117 caacaacaac 126  Q
    ||||||||||    
T  47984750 caacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||||||||||| |||||   | |||||||||| |||| | ||| ||||||| | ||||||||||||||||||| |     
T  48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
Q  117 caacaacaac 126  Q
    ||||||||||    
T  48003324 caacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 25058739 - 25058861
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| || ||||| |||||| ||| |||| |||||| || || | ||| |||||| |  |||||||||| ||||| |||||| |||||||||||    
T  25058739 catcatcaattcacaattaagtatactcaaatcatgattcactcacaatagcataagttaacaataacaacatcaatggaatatgaattacatctcattt 25058838  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  25058839 caatcaaaacatatcaaatttca 25058861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 22275209 - 22275346
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||| |||  || |||||  || || |||||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  22275209 catcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 22275308  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  22275309 caatcaaaacatatcaaatttcatcaattaagtataat 22275346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||||||||||| |||||   | ||||| |||| |||| | ||| ||||||| | ||||||||||||||||||| |     
T  47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
Q  117 caacaacaac 126  Q
    ||||||||||    
T  47994037 caacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||||||||||| |||||   | ||||| |||| |||| | ||| ||||||| | ||||||||||||||||||| |     
T  48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
Q  117 caacaacaac 126  Q
    ||||||||||    
T  48012610 caacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 15859240 - 15859156
Alignment:
Q  64 acaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||| |||| ||| | ||||||| | ||||| |||||| | |||| |||||||||||| || |||||||||| |||||||    
T  15859240 acaacatcaattaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgag 15859156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 1990866 - 1990939
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||||||||||||  ||||||| || |||| || ||||||||||||||| || ||||||| | ||||| |||||    
T  1990866 caacaacatcatttaaacatgattctcatcacagttcaacaacaacataacacaattcacaatttgagcataat 1990939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 15936843 - 15936759
Alignment:
Q  64 acaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||| |||| | | | ||||||| | ||||| |||||| ||||||  | ||||||||| ||||||||||||| |||||||    
T  15936843 acaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgag 15936759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 15938685 - 15938601
Alignment:
Q  64 acaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||| |||| | | | ||||||| | ||||| |||||| ||||||  | ||||||||| ||||||||||||| |||||||    
T  15938685 acaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgag 15938601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 54416 - 54549
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||| ||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 54515  T
Q  117 caacaacaacatatcaaaattcactaattgagta 150  Q
    |||||||||||||||||||||||| |||||||||    
T  54516 caacaacaacatatcaaaattcaccaattgagta 54549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 45076 - 45163
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgagta 150  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45076 aacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagta 45163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 45011 - 45052
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcac 58  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  45011 catcatcaatccataaatatgtatacccaagtcatgattcac 45052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 7712 - 7575
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||| | | ||||||||||||||||||||||||    
T  7712 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacatcagttaataacaataaccttaatggaacatgaatcacatctcattt 7613  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
     |||||||||||||||| ||||||||||||||||||||    
T  7612 taacaacaacatatcaagattcactaattgagtataat 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 9e-51; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 21141895 - 21142032
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  21141895 catcatcaatccataattatgtatacccaagtcgtaattcacccacaacaacatcagttaatagcaataaccttaatggaacatgaatcacatctcattt 21141994  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
     |||||||||||||||| ||||||||||||||||||||    
T  21141995 taacaacaacatatcaagattcactaattgagtataat 21142032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 12728392 - 12728514
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  ||| |||||| ||||| ||||||||||||||||||    
T  12728392 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 12728491  T
Q  117 caacaacaacatatcaaaattca 139  Q
    ||| || ||||||||||| ||||    
T  12728492 caataaaaacatatcaaatttca 12728514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 34824475 - 34824597
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  ||| |||||| ||||| ||||||||||||||||||    
T  34824475 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 34824574  T
Q  117 caacaacaacatatcaaaattca 139  Q
    ||| || ||||||||||| ||||    
T  34824575 caataaaaacatatcaaatttca 34824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 23778301 - 23778164
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  23778301 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 23778202  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | | ||||||||| ||||  |||| ||||||||    
T  23778201 caatcaaatcatatcaaatttcatcaattaagtataat 23778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 16935593 - 16935715
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | ||||| |||| |  ||| |||||| ||||| ||||||||||||||||||    
T  16935593 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatcaatggaatatgaatcacatctcattt 16935692  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  16935693 caatcaaaacatatcaaatttca 16935715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 17006253 - 17006375
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | ||||| |||| |  ||| |||||| ||||| ||||||||||||||||||    
T  17006253 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatcaatggaatatgaatcacatctcattt 17006352  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  17006353 caatcaaaacatatcaaatttca 17006375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 5888885 - 5888832
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  5888885 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 5888832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 11231594 - 11231472
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  11231594 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 11231495  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  11231494 caatcaaaacatatcaaatttca 11231472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 24341652 - 24341521
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | ||||||||||||||  || |||||   | |  ||||||| |||| | ||| ||||||| | |||||||||||| |||||| ||    
T  24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| || |||||||||| |||||||    
T  24341552 caacaacaacttagcaaaattcaccaattgag 24341521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 25265653 - 25265522
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||||||| ||| |||||   | |||||||||| |||| | ||||||||||| | |||||||  || ||||  | ||    
T  25265653 catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 25265554  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||||||| |||||||||| |||||||    
T  25265553 caacaacaacatagcaaaattcaccaattgag 25265522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 22513441 - 22513339
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  22513441 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 22513342  T
Q  117 caa 119  Q
    |||    
T  22513341 caa 22513339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 28776063 - 28775961
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  28776063 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 28775964  T
Q  117 caa 119  Q
    |||    
T  28775963 caa 28775961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 23774137 - 23774190
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||||||||| |||||||||||| ||||||||| || ||||||||    
T  23774137 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 23774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 24686037 - 24685935
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| ||||||| || |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  24686037 catcatcaatccacaattaagtatacctaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 24685938  T
Q  117 caa 119  Q
    |||    
T  24685937 caa 24685935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 36982658 - 36982573
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| |||| | ||| ||||||| | ||||| |||||| | |||| |||||||||||| |  |||||||||| |||||||    
T  36982658 aacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgag 36982573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 16195230 - 16195350
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||| |||||| |||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16195230 catcatcaatccataattatatatacctaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 16195329  T
Q  117 caacaacaacatatcaaaatt 137  Q
    |||||||||||||||||||||    
T  16195330 caacaacaacatatcaaaatt 16195350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 13662521 - 13662399
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||||||||||||||||||| |||| |||||| || || | |||||||||| |  ||| |||||| ||||| ||||||||||||||||||    
T  13662521 catcatcaatccataattatgtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 13662422  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  13662421 caatcaaaacatatcaaatttca 13662399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 22006514 - 22006392
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||| |||| ||||| |||||||||| |||| |||||| || || |||||||||||| |  ||| |||||| ||||| ||||||||||||||||||    
T  22006514 catcatcagtccacaattaagtatacccaaatcatgattcactcacaataacatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 22006415  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  22006414 caatcaaaacatatcaaatttca 22006392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15319415 - 15319293
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | |||||||||||||||||||| |||    
T  15319415 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatctctttt 15319316  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  15319315 caatcaaaacatatcaaatttca 15319293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15499784 - 15499662
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | |||||||||||||||||||| |||    
T  15499784 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatctctttt 15499685  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  15499684 caatcaaaacatatcaaatttca 15499662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 22089050 - 22088928
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  22089050 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 22088951  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  22088950 caatcaaaacatatcaaatttca 22088928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 271616 - 271514
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  271616 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 271517  T
Q  117 caa 119  Q
    |||    
T  271516 caa 271514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 644304 - 644406
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  644304 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 644403  T
Q  117 caa 119  Q
    |||    
T  644404 caa 644406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 830039 - 830141
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  830039 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 830138  T
Q  117 caa 119  Q
    |||    
T  830139 caa 830141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 38533712 - 38533776
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaatt 145  Q
    ||||||||||| | ||||||||||| |||| || ||||||||||||||| || |||||| |||||    
T  38533712 caacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaataatt 38533776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 5854677 - 5854725
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacata 129  Q
    ||||||||||| | ||||||||||| |||| || |||||||||||||||    
T  5854677 caacaacatcaattgaacatgaatctcatcacaattcaacaacaacata 5854725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 34414 - 34278
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||||||||  ||||||||||||||| |||||| || || | |||||||||||||||||||||| | |||||||||||||| |||||||||    
T  34414 catcatcaatccataatttagtatacccaagtcatgattcactcacaatagcatcagttaatagcaacaacattaatggaacatgaatcatatctcattt 34315  T
Q  117 caacaacaacatatcaaaattcactaattgagtataa 153  Q
    ||||||||||||||| |||||||  |||| |||||||    
T  34314 caacaacaacatatccaaattcatcaattaagtataa 34278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 56346 - 56240
Alignment:
Q  34 tatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaa 133  Q
    |||| ||||||||||||| |||||| || |||||||||| ||||||||| |||||||| ||||||||||||||||| || ||||||||||||| || |||    
T  56346 tatgcatacccaagtcatgattcacccacaacaacatcaattaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaacaacttagcaa 56247  T
Q  134 aattcac 140  Q
    |||||||    
T  56246 aattcac 56240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 1556005 - 1556142
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| ||||||||||| || || |||||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  1556005 catcatcaatccacaattaagtatacccaattcataattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 1556104  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  1556105 caattaaaacatatcaaatttcatcaattaagtataat 1556142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 19610018 - 19610140
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||||| |  |||||||||| ||||| |||||  |||||||||||    
T  19610018 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaactacatctcattt 19610117  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  19610118 caatcaaaacatatcaaatttca 19610140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 27740838 - 27740969
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| ||||||||  ||| |||||  || ||||||||||| |||||||||| |||||| | |||||||||||| |||||| ||    
T  27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    ||||||| || || |||||||||| |||||||    
T  27740938 caacaacgacttagcaaaattcaccaattgag 27740969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 29665937 - 29666006
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgagta 150  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||| || |||||||||| |||||||||    
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagta 29666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16376629 - 16376507
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  16376629 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16376530  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  16376529 caatcaaaacatatcaaatttca 16376507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16383953 - 16383831
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  16383953 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16383854  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  16383853 caatcaaaacatatcaaatttca 16383831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16556395 - 16556273
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  16556395 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16556296  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  16556295 caatcaaaacatatcaaatttca 16556273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16632951 - 16632829
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  16632951 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16632852  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  16632851 caatcaaaacatatcaaatttca 16632829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 22225994 - 22225892
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| ||||||||||||||||||    
T  22225994 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcattt 22225895  T
Q  117 caa 119  Q
    |||    
T  22225894 caa 22225892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 10488699 - 10488801
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  10488699 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 10488798  T
Q  117 caa 119  Q
    |||    
T  10488799 caa 10488801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 35009702 - 35009571
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| |||||||||  || |||||   | |||||||||| |||| | ||||||||||| | |||||||  || ||||  | ||    
T  35009702 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 35009603  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||||||| |||||||||| |||||||    
T  35009602 caacaacaacatagcaaaattcaccaattgag 35009571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 18398983 - 18399059
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattca 139  Q
    |||||||||| |||  | ||||||||||| | ||||||||||| |||| || ||||||||||||||| || ||||||    
T  18398983 aacaacatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattca 18399059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 25367441 - 25367363
Alignment:
Q  61 ataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattca 139  Q
    |||||||||||| |||  | ||||||||||| | |||||||||||  ||| || ||||||||||||||| || ||||||    
T  25367441 ataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacataacacaattca 25367363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 29870031 - 29869978
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    |||||||||||||| |||| ||| |||||||| ||||||||| || ||||||||    
T  29870031 catcatcaatccatcattaagtacacccaagttataattcactcacaacaacat 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 10595 - 10458
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| ||||||||||||||| |||| | || || | |||||||||| | ||||||||||| ||||| |||||| |||||||||||    
T  10595 catcatcaatccacaattaagtatacccaagtcatgattccctcacaatagcatcagttaacaacaacaacatcaatggaatatgaattacatctcattt 10496  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  10495 caatcaaaacatatcaaatttcatcaattaagtataat 10458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 2392 - 2529
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| ||||||||||  ||| |||||| || || |||||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  2392 catcatcaatccacaattaagtatacccaaaccatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 2491  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    ||| || ||||||||||| ||||  |||| ||||||||    
T  2492 caataaaaacatatcaaatttcatcaattaagtataat 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15760370 - 15760233
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || |||||||||||| |  |||||||||| ||||| |||||| |||||||||||    
T  15760370 catcatcaatccacaattaagtatacccaattcattattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15760271  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  15760270 caattaaaacatatcaaatttcatcaattaagtataat 15760233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 16418498 - 16418551
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  16418498 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 16418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15951047 - 15950925
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| ||||||  | || | |||||||||| |  ||  |||||| ||||| ||||||||||||||||||    
T  15951047 catcatcaatccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataatcacatcaatggaatatgaatcacatctcattt 15950948  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  15950947 caatcaaaacatatcaaatttca 15950925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 7822728 - 7822830
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  7822728 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 7822827  T
Q  117 caa 119  Q
    |||    
T  7822828 caa 7822830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 7830039 - 7830141
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  7830039 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 7830138  T
Q  117 caa 119  Q
    |||    
T  7830139 caa 7830141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 15852456 - 15852494
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataatt 55  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15852456 catcatcaatccataattatgtatacccaagtcataatt 15852494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 27101893 - 27101791
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  27101893 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 27101794  T
Q  117 caa 119  Q
    |||    
T  27101793 caa 27101791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 27109241 - 27109139
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  27109241 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 27109142  T
Q  117 caa 119  Q
    |||    
T  27109141 caa 27109139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 27176433 - 27176535
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  27176433 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 27176532  T
Q  117 caa 119  Q
    |||    
T  27176533 caa 27176535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 38783985 - 38783883
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  38783985 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 38783886  T
Q  117 caa 119  Q
    |||    
T  38783885 caa 38783883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 10000625 - 10000572
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||||||||| |||||||||||| ||||||||| || ||||||||    
T  10000625 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 10000572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 13321038 - 13321146
Alignment:
Q  41 acccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaa-caacatatcaaaattca 139  Q
    ||||||||||| |||||   | |||||||||| |||| | ||| ||||||| | |||||||||||| |||||| |||||||| |||| || |||||||||    
T  13321038 acccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattca 13321137  T
Q  140 ctaattgag 148  Q
    | |||||||    
T  13321138 ccaattgag 13321146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 296184 - 296139
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcaca 108  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||    
T  296184 aacaacatcaattaatagcaacaacatcaattgaacatgaatcaca 296139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 47481294 - 47481164
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| |||||||||  || |||||   | || ||||||| |||| ||| | ||||||| | ||||| |||||| | |||| ||    
T  47481294 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt 47481195  T
Q  117 caacaacaacatatcaaaattcactaattga 147  Q
    |||||||||| || |||||||||| ||||||    
T  47481194 caacaacaacttagcaaaattcaccaattga 47481164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 15368411 - 15368475
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaatt 145  Q
    |||||||||||||  ||||||| || ||||  | |||||||||||||||||| |||||| |||||    
T  15368411 caacaacatcatttaaacatgattctcatcataattcaacaacaacatatcacaattcattaatt 15368475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 46523394 - 46523511
Alignment:
Q  22 tcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaaca 121  Q
    |||||||||||||| ||||||||||||||| |||||| || |||| |||||||||| |  |||||||||| ||||| |||||| ||||||||||||||      
T  46523394 tcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatc 46523493  T
Q  122 acaacatatcaaaattca 139  Q
    | ||||||||||| ||||    
T  46523494 aaaacatatcaaatttca 46523511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18060014 - 18059892
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||| | |  ||| |||||| ||||| ||||||||||||||||||    
T  18060014 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttgacaataaccacatcaatggaatatgaatcacatctcattt 18059915  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  18059914 caatcaaaacatatcaaatttca 18059892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 20254312 - 20254365
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  20254312 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 20254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 38055347 - 38055225
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  38055347 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 38055248  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  38055247 caatcaaaacatatcaaatttca 38055225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 17004638 - 17004740
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  17004638 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 17004737  T
Q  117 caa 119  Q
    |||    
T  17004738 caa 17004740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 22035448 - 22035501
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||||||||| |||||||||||| ||||||||| || ||||||||    
T  22035448 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 22035501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 7641189 - 7641136
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| || ||||||||    
T  7641189 catcatcaatccataattaagtacacccaagttataattcactcacaacaacat 7641136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 8849 - 8980
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | ||||||||||||||  || |||||   | |||||||||| |||||||||| ||||||| | |||||| ||||| |||||| ||    
T  8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| || |||||||||| |||||||    
T  8949 caacaacaacttagcaaaattcaccaattgag 8980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 39646 - 39768
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  |||||||||| || || |||||| |||||||||||    
T  39646 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatgaaatatgaataacatctcattt 39745  T
Q  117 caacaacaacatatcaaaattca 139  Q
    ||| || ||||||||||| ||||    
T  39746 caaaaaaaacatatcaaatttca 39768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 31309 - 31411
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  31309 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 31408  T
Q  117 caa 119  Q
    |||    
T  31409 caa 31411  T

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Target: scaffold1666 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 252 - 115
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  ||| |||||| || || |||||| |||||||||||    
T  252 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataactacatcaatgtaatatgaattacatctcattt 153  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  152 caattaaaacatatcaaatttcatcaattaagtataat 115  T

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Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 7210 - 7263
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  7210 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 7263  T

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Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 154263 - 154141
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | ||| |||||| |  ||| |||||| ||||| |||| |||||||||||||    
T  154263 catcatcaatccacaattaagtatacccaaatcatgattcacccacaatagcataagttaacaataaccacatcaatggaatatgattcacatctcattt 154164  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  154163 caatcaaaacatatcaaatttca 154141  T

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Target: scaffold0195 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 19206 - 19337
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| |||||||||  || |||||   | |||||||||| |||| ||||| ||||||| | ||||| |||||| | |||| ||    
T  19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| || |||||||||| |||||||    
T  19306 caacaacaacttagcaaaattcaccaattgag 19337  T

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Target: scaffold0195; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 21290 - 21421
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| |||||||||  || |||||   | |||||||||| |||| ||||| ||||||| | ||||| |||||| | |||| ||    
T  21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    |||||||||| || |||||||||| |||||||    
T  21390 caacaacaacttagcaaaattcaccaattgag 21421  T

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Target: scaffold0213 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 29162 - 29284
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| || ||||| ||||| |||| |||||||||||  | || ||||| | |||| |  ||| |||||| ||||| ||||||||||||||||||    
T  29162 catcatcaatacacaattaagtataaccaaatcataattcactaacaataacataaattaacaataaccacatcaatggaatatgaatcacatctcattt 29261  T
Q  117 caacaacaacatatcaaaattca 139  Q
    |||  | ||||||||||| ||||    
T  29262 caatcaaaacatatcaaatttca 29284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 39103 - 39205
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  | || | |||||||||| |  ||| |||| | ||||| |||||||||||||| |||    
T  39103 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 39202  T
Q  117 caa 119  Q
    |||    
T  39203 caa 39205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 1831 - 1694
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| || || | |||||||||| |  |||||||||| |   | |||| | |||||||||||    
T  1831 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaattttatatgatttacatctcattt 1732  T
Q  117 caacaacaacatatcaaaattcactaattgagtataat 154  Q
    |||  | ||||||||||| ||||  |||| ||||||||    
T  1731 caatcaaaacatatcaaatttcatcaattaagtataat 1694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 13506 - 13637
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||| ||||| ||| | |||| ||||||||||||| |||||   | |||||||||| |||| | ||||||||||| | |||||||  || ||||  | ||    
T  13506 catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 13605  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||||||| |||||||||  |||||||    
T  13606 caacaacaacatagcaaaattcatcaattgag 13637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 22624 - 22542
Alignment:
Q  63 aacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaatt 145  Q
    ||||| |||| |||| | ||||||||||| |  ||||||| |||||||||| ||||||||||||||| || |||||| |||||    
T  22624 aacaatatcaattaacaacaacaacatcaattaaacatgattcacatctcaattcaacaacaacatagcacaattcaataatt 22542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 41648 - 41778
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||| ||| | |||| |||||||||  || |||||   | |||||||||| |||| | ||||||||||| | |||||||  || ||||  | ||    
T  41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
Q  117 caacaacaacatatcaaaattcactaattga 147  Q
    ||||||||||||| |||||||||| ||||||    
T  41748 caacaacaacatagcaaaattcaccaattga 41778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 6598 - 6651
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || ||||||||    
T  6598 catcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 6651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 24004 - 23951
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacat 70  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| || ||||||||    
T  24004 catcatcaatccataattaagtacacccaagttataattcactcacaacaacat 23951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 3042 - 3094
Alignment:
Q  96 aacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgag 148  Q
    ||||||||||| |||||| |||||||||||| || |||||||||| |||||||    
T  3042 aacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgag 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 34724 - 34600
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatca-ttggaacatgaatcacatctcatt 115  Q
    |||||||||||||| | |||| ||||||||||  | |||||   | ||||||||||  ||| | ||| ||||||| ||  ||||||||||| |||||| |    
T  34724 catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 34625  T
Q  116 tcaacaacaacatatcaaaattcac 140  Q
    ||||||||||| || ||||||||||    
T  34624 tcaacaacaacttagcaaaattcac 34600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 107747 - 107878
Alignment:
Q  17 catcatcaatccataattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcattt 116  Q
    |||||||||||||| | |||| | |||||||  || |||||   || ||||||||| |||| | | | ||||||| | ||||| |||||| ||||||  |    
T  107747 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 107846  T
Q  117 caacaacaacatatcaaaattcactaattgag 148  Q
     ||||||||| ||||||||||||| |||||||    
T  107847 taacaacaacttatcaaaattcaccaattgag 107878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 69520 - 69578
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacatatcaaaattca 139  Q
    ||||||||||| | ||||||||||| |||| || ||||||||||||||| || ||||||    
T  69520 caacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcacaattca 69578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 3432 - 3551
Alignment:
Q  35 atgtatacccaagtcataattcacgcataacaa-catcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatatc-a 132  Q
    |||||||||||||||||  ||||| || || || |||||||||| | |||||||||||   || |||||||||||||| |||||  |||||||| ||| |    
T  3432 atgtatacccaagtcatggttcactcacaataatcatcagttaacaacaacaacatca-aagagcatgaatcacatcttatttc-tcaacaacacatcaa 3529  T
Q  133 aaattcactaattgagtataat 154  Q
    |||||||| ||||| |||||||    
T  3530 aaattcaccaattgggtataat 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 77081 - 76973
Alignment:
Q  31 aattatgtatacccaagtcataattcacgcataacaacatcagttaatagcaacaacatcattggaacatgaatcacatctcatttcaacaacaacatat 130  Q
    ||||||| ||||||||| ||| | |||   ||||||| |||| |||  | ||||||||||| | ||||||||||| || | || |||||||||||||||     
T  77081 aattatgaatacccaagccatgaatcatcaataacaatatcacttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacatag 76982  T
Q  131 caaaattca 139  Q
    || ||||||    
T  76981 cataattca 76973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 197437 - 197389
Alignment:
Q  81 caacaacatcattggaacatgaatcacatctcatttcaacaacaacata 129  Q
    ||||||||||| | ||||||||||| |||| || |||||||||||||||    
T  197437 caacaacatcaattgaacatgaatctcatcacaattcaacaacaacata 197389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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