View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0959_high_16 (Length: 301)
Name: NF0959_high_16
Description: NF0959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0959_high_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 3160853 - 3161121
Alignment:
| Q |
30 |
tttttatcaaccaacaacnnnnnnnncaaggaaatgtatatggaaatgaatcaacatatttcacaaatgaacaatttatagatttctttgatggtcctga |
129 |
Q |
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| T |
3160853 |
tttttatcaaccaacaacaaaaaaaacaaggaaatgtatatggaaatgaatcaacatatttcacaaatgaacaatttatagatttctttgatggtcctga |
3160952 |
T |
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| Q |
130 |
agaagattgttgcacaattaacagcattgaatttagtaacaacagtactatcgcacaaattgactgcattacaagtagttttgaatcatgtttaactgaa |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3160953 |
agaagattgttgcacaattaacagcattgaatttagtaacaacagtagt---gcacaaattgactgcattacaagtagttttgaatcatgtttaactgaa |
3161049 |
T |
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| Q |
230 |
aaagatgaattcatttgcaaggaaaaggaaactacatcaagtgatgaaaaagtggaagacattgaagaaaac |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
3161050 |
aaagatgaattcatttgcaaggaaaaggaaactacatcaagtgatgaaagagtggaagacattgaagaaaac |
3161121 |
T |
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