View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0959_low_9 (Length: 349)
Name: NF0959_low_9
Description: NF0959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0959_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 30 - 339
Target Start/End: Original strand, 32762792 - 32763101
Alignment:
| Q |
30 |
aacaggacttgtttattttccactatatgcattagagatgcatgaacaaaagagttacatggatttggctgatccaaggttagaaggacgtgttacaatc |
129 |
Q |
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| T |
32762792 |
aacaggacttgtttattttccactatatgcattagagatgcatgaacaaaagagttacatggatttggctgatccaaggttagaaggacgtgttacaatc |
32762891 |
T |
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| Q |
130 |
gatgaagtggagaaactcgttcgtattgcattgtgttgtgttcatgaagatccatcacttaggcctaacatggttactgttgttggaatgttagaaggtg |
229 |
Q |
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| T |
32762892 |
gatgaagtggagaaactcgttcgtattgcattgtgttgtgttcatgaagatccatcacttaggcctaacatggttactgttgttggaatgttagaaggtg |
32762991 |
T |
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| Q |
230 |
ggactccattgccacaacctaggatggaatctttgaatttcttgaggttctatggtcgtaggttttctgaggcttctgttatagcagaagagaatgaata |
329 |
Q |
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| T |
32762992 |
ggactccattgccacaacctaggatggaatctttgaatttcttgaggttctatggtcgtaggttttctgaggcttctgttatagcagaagagaatgaaca |
32763091 |
T |
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| Q |
330 |
tggttctgtg |
339 |
Q |
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|||||||||| |
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| T |
32763092 |
tggttctgtg |
32763101 |
T |
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