View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0961_high_34 (Length: 221)
Name: NF0961_high_34
Description: NF0961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0961_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 39783012 - 39782889
Alignment:
| Q |
1 |
cgacgagactgaaattgagctgacattaggcccgtcgagttataaccgtagcaagaaaattgaaacaccactaacttcagaatcaggacatagtttgtct |
100 |
Q |
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| T |
39783012 |
cgacgagactgaaattgagctgacattaggcccgtcgagttataaccgtagcaagaaaattgaaacaccactaacttcagaatcaggacatagtttgtct |
39782913 |
T |
|
| Q |
101 |
tcatcttcaactggatcaagtgat |
124 |
Q |
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|||||||||||||||||||||||| |
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| T |
39782912 |
tcatcttcaactggatcaagtgat |
39782889 |
T |
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