View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0961_low_17 (Length: 397)

Name: NF0961_low_17
Description: NF0961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0961_low_17
NF0961_low_17
[»] chr6 (15 HSPs)
chr6 (30-387)||(12782007-12782364)
chr6 (74-270)||(12786230-12786426)
chr6 (95-324)||(12785511-12785740)
chr6 (95-266)||(12781321-12781492)
chr6 (77-156)||(33288129-33288208)
chr6 (96-147)||(33390646-33390697)
chr6 (76-142)||(33403164-33403230)
chr6 (96-140)||(9169431-9169475)
chr6 (96-148)||(33307059-33307111)
chr6 (312-371)||(12786462-12786521)
chr6 (96-147)||(33060128-33060179)
chr6 (96-147)||(33412491-33412542)
chr6 (96-147)||(33642073-33642124)
chr6 (97-147)||(33361072-33361122)
chr6 (96-140)||(31566587-31566631)
[»] chr4 (10 HSPs)
chr4 (110-363)||(31030339-31030592)
chr4 (110-363)||(31488841-31489094)
chr4 (110-363)||(31020458-31020711)
chr4 (177-316)||(31476303-31476442)
chr4 (96-245)||(31529105-31529254)
chr4 (189-289)||(31151041-31151141)
chr4 (74-265)||(31482190-31482384)
chr4 (83-147)||(31496412-31496476)
chr4 (96-147)||(31501582-31501633)
chr4 (169-246)||(31162296-31162375)
[»] chr2 (1 HSPs)
chr2 (96-147)||(17438145-17438196)


Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 30 - 387
Target Start/End: Original strand, 12782007 - 12782364
Alignment:
Q  30 ctttgcacctcatttgagtgatcttggaatttctttccaagataggcaaaggattcaccataacaaccactttgctttcgcacctcagaaggattaacat 129  Q
    |||||||||  ||||||||||||||||||| |||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  12782007 ctttgcaccatatttgagtgatcttggaatctctttccatgatagttaaaggattcaccataaccaccactttgctttcgcacctcagaaagatcaacat 12782106  T
Q  130 cataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattctcgcaaacaccaagatgaataagcatagttcttaga 229  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  12782107 cataaaaaacaggcagaacgcgttttccatacaatacactgcagttaaggatgtatgctaattctcgcaaacaccaagttgaagaagcatagtttttaga 12782206  T
Q  230 gaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatggaattacctctttgaagattaatgtcatctatgaatgtaaaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  12782207 gaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatggaattacctttttgaagattagtgtcatctctgaatgtaaaa 12782306  T
Q  330 attctttttctttgaagggcaccataaagttgattagtgaaattcaaacgtgtctctg 387  Q
    |||||||||||||||||||||||| |||| |||| ||||||||| |||||||| ||||    
T  12782307 attctttttctttgaagggcaccaaaaagatgatcagtgaaattgaaacgtgtgtctg 12782364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 74 - 270
Target Start/End: Original strand, 12786230 - 12786426
Alignment:
Q  74 ggcaaaggattcaccataacaaccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcag 173  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  12786230 ggcaagggattcgccataaccaccactttgctttcgcacctcagaaggatcaacatcataaaaaataggcagaatgcattttccatacaatacactgcag 12786329  T
Q  174 ttaaggatgtatgctaattctcgcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaa 270  Q
    | ||||||||| |||||||||  ||| ||  || |||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  12786330 tgaaggatgtacgctaattctaccaagcaaaaacatgaatcagcaaagttcttagagaatacaacaatgaaaacctgagagtcttcaattgcgtgaa 12786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 95 - 324
Target Start/End: Original strand, 12785511 - 12785740
Alignment:
Q  95 accactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattct 194  Q
    ||||||||||||| | ||||||||||||| |||||||||||||| ||| |||||| ||||||||||   |  |||||| | |||||||||| | ||||||    
T  12785511 accactttgcttttgtacctcagaaggatcaacatcataaaaaataggaagaatgtgttttccatattttttactgcaatgaaggatgtattccaattct 12785610  T
Q  195 cgcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatggaattac 294  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||  || |||  ||| ||||||| | | ||    
T  12785611 cgcaaacaccaagttgaagaagcatagttcttagagaatacaacaatgtaaagctgagaggcttcaattgctctaaagagtccgggtgctatgaattcac 12785710  T
Q  295 ctctttgaagattaatgtcatctatgaatg 324  Q
    || ||| ||| ||| |||||||| ||||||    
T  12785711 cttttttaagtttagtgtcatctctgaatg 12785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 95 - 266
Target Start/End: Original strand, 12781321 - 12781492
Alignment:
Q  95 accactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattct 194  Q
    ||||||||||||| | ||||||||||||| ||||||||| |||||||| |||| | |||||||||    |  |||||| | |||||||||| | ||||||    
T  12781321 accactttgcttttgtacctcagaaggatcaacatcatagaaaacaggaagaacgtgttttccatgttttttactgcaatgaaggatgtattccaattct 12781420  T
Q  195 cgcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgct 266  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  12781421 cgcaaacaccaagttgaggaagcatagttcttagagaatacaacaatgtaaacctgagaggcttcaattgct 12781492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 33288129 - 33288208
Alignment:
Q  77 aaaggattcaccataacaaccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaatgcgttttc 156  Q
    ||||| ||||||||||   |||||||||||||||||||||||||||| ||||||||| ||||| || |||||| ||||||    
T  33288129 aaaggcttcaccataaatcccactttgctttcgcacctcagaaggatcaacatcatagaaaactggaagaatgtgttttc 33288208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 33390646 - 33390697
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  33390646 ccactttgctttcgaacctcagaaggatcaacatcataaaaaacaggaagaa 33390697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 33403164 - 33403230
Alignment:
Q  76 caaaggattcaccataacaaccactttgctttcgcacctcagaaggattaacatcataaaaaacagg 142  Q
    |||||| ||||| ||||  ||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  33403164 caaaggcttcacaataaataccactttgctttcgaacctcagaaggatcaacatcatagaaaacagg 33403230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 9169431 - 9169475
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaaca 140  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  9169431 ccactttgctttcgcacctcagaaggatcaacatcatagaaaaca 9169475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 33307059 - 33307111
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaat 148  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  33307059 ccactttgctttcgaaccacagaaggatcaacatcataaaaaacaggaagaat 33307111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 12786462 - 12786521
Alignment:
Q  312 tcatctatgaatgtaaaaattctttttctttgaagggcaccataaagttgattagtgaaa 371  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||| |||  |||||||    
T  12786462 tcatccatgaatgtcaaaattccttttctttgaagggcaccataaagatgacaagtgaaa 12786521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 33060128 - 33060179
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||| ||||    
T  33060128 ccactttgcttccgcacctcagaaggatcaacatcatagaaaacaggaagaa 33060179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 33412491 - 33412542
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||| ||||    
T  33412491 ccactttgcttccgcacctcagaaggatcaatatcataaaaaacaggaagaa 33412542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 33642124 - 33642073
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  33642124 ccactttgctttcgtacctcagaaggatcaacatcataaaaaataggaagaa 33642073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 33361072 - 33361122
Alignment:
Q  97 cactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||| ||||    
T  33361072 cactttgcttccgcacctcagaaggatcaacatcatagaaaacaggaagaa 33361122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 31566631 - 31566587
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaaca 140  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||    
T  31566631 ccactttgctttcgaacctcagaaggatcaacatcatagaaaaca 31566587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 110 - 363
Target Start/End: Original strand, 31030339 - 31030592
Alignment:
Q  110 cacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattctcgcaaacaccaagat 209  Q
    |||||||||||||| |||||||||||||||||| ||||  ||| ||||| | | |  |||||||| |||||||| | | ||||||||||| ||||||| |    
T  31030339 cacctcagaaggatcaacatcataaaaaacaggaagaacacgtcttccagaaacttgactgcagtcaaggatgtgtaccaattctcgcaagcaccaagtt 31030438  T
Q  210 gaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatggaattacctctttgaagattaa 309  Q
    ||  |||||||||| || ||||  ||  |||||||||||||||| |||||||||||  ||||||| |||| || |||||| | |||| |||||||||||     
T  31030439 gaggaagcatagtttttggagaggaccgcaatgaaaacctgagacccttcaattgcacgaatgagctcgggtggtatggattcacctttttgaagattag 31030538  T
Q  310 tgtcatctatgaatgtaaaaattctttttctttgaagggcaccataaagttgat 363  Q
    |||| ||| | |||| |||||| | |||||||||||||||| || |||| ||||    
T  31030539 tgtcgtctctaaatgcaaaaatgccttttctttgaagggcagcaaaaagatgat 31030592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 110 - 363
Target Start/End: Complemental strand, 31489094 - 31488841
Alignment:
Q  110 cacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattctcgcaaacaccaagat 209  Q
    |||||||||||||| |||||||||||||||||| ||||  ||| ||||| | | |  |||| ||| |||||||||| | ||||||||||| ||||||| |    
T  31489094 cacctcagaaggatcaacatcataaaaaacaggaagaacacgtcttccaaaaacttgactgtagtgaaggatgtattccaattctcgcaagcaccaagtt 31488995  T
Q  210 gaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatggaattacctctttgaagattaa 309  Q
    ||  |||||||||| || ||||  ||  |||||||||||||||| |||||||||||  ||||||| |||| |||||| || | |||| ||||||| |||     
T  31488994 gaggaagcatagtttttggagaggaccgcaatgaaaacctgagacccttcaattgcacgaatgagctcgggtgctatcgattcacctttttgaagcttag 31488895  T
Q  310 tgtcatctatgaatgtaaaaattctttttctttgaagggcaccataaagttgat 363  Q
    |||||||| | || | |||||| | |||||||||||||||| || |||| ||||    
T  31488894 tgtcatctctaaacgcaaaaatgccttttctttgaagggcagcaaaaagatgat 31488841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 110 - 363
Target Start/End: Original strand, 31020458 - 31020711
Alignment:
Q  110 cacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattctcgcaaacaccaagat 209  Q
    |||||||||||||| |||||||||||||||||| ||||  ||| ||||| | | |  |||||||| |||||||| | | ||||||||||| ||||||| |    
T  31020458 cacctcagaaggatcaacatcataaaaaacaggaagaacacgtcttccagaaacttgactgcagtcaaggatgtgtaccaattctcgcaagcaccaagtt 31020557  T
Q  210 gaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatggaattacctctttgaagattaa 309  Q
    ||  ||| |||||| || ||||  ||  |||||||||||||||| |||||||||||  ||||||| |||| || |||||| | |||| |||||||||||     
T  31020558 gaggaagaatagtttttggagaggaccgcaatgaaaacctgagacccttcaattgcacgaatgagctcgggtggtatggattcacctttttgaagattag 31020657  T
Q  310 tgtcatctatgaatgtaaaaattctttttctttgaagggcaccataaagttgat 363  Q
     ||| ||| | |||| |||||| | |||||||||||||||| || |||| ||||    
T  31020658 cgtcgtctctaaatgcaaaaatgccttttctttgaagggcagcaaaaagatgat 31020711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 31476442 - 31476303
Alignment:
Q  177 aggatgtatgctaattctcgcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggt 276  Q
    ||||||||| | ||||||  ||| ||||||| |||  |||| |||||||| || || || |||| |||||||||||| ||||||||||| |||| ||| |    
T  31476442 aggatgtattccaattctttcaagcaccaagttgagaaagcgtagttctttgacaagaccacaacgaaaacctgagacccttcaattgcatgaaagagtt 31476343  T
Q  277 cggatgctatggaattacctctttgaagattaatgtcatc 316  Q
    | | ||||||||| | |||| ||||||||||| |||||||    
T  31476342 caggtgctatggattcacctttttgaagattagtgtcatc 31476303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 245
Target Start/End: Original strand, 31529105 - 31529254
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcagttaaggatgtatgctaattctc 195  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||| ||||  ||||||||| | | |     ||| | ||||||||||   ||||| |    
T  31529105 ccactttgctttcgcacctcggaaggatcaacatcatagaaaacagggagaacacgttttccagaaagttgtacgcaatgaaggatgtattgcaattccc 31529204  T
Q  196 gcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaa 245  Q
    |||| ||||||| |||  |||||||||| || ||||| ||||||||||||    
T  31529205 gcaagcaccaagttgaggaagcatagttgtttgagaagacaacaatgaaa 31529254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 31151041 - 31151141
Alignment:
Q  189 aattctcgcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgcttgaatgaggtcggatgctatgg 288  Q
    ||||||||||||||||||  |||  ||||||||||||||||||| || ||||  |||| ||||||| ||||||||||| ||| ||| || | ||||||||    
T  31151041 aattctcgcaaacaccaaactgaggaagcatagttcttagagaaaaccacaacaaaaatctgagagtcttcaattgctcgaaggagttcaggtgctatgg 31151140  T
Q  289 a 289  Q
    |    
T  31151141 a 31151141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 265
Target Start/End: Complemental strand, 31482384 - 31482190
Alignment:
Q  74 ggcaaaggattcaccataacaaccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaatgcgttttccatacaatacactgcag 173  Q
    |||||||| || | ||||||  |||||||||||||| |||||||| ||||| |||||||| ||||||| | |||  |||||| |  |   |  |||||||    
T  31482384 ggcaaaggctttagcataactcccactttgctttcgtacctcagatggattgacatcatagaaaacagtccgaacacgtttttctgatggttgactgcag 31482285  T
Q  174 t---taaggatgtatgctaattctcgcaaacaccaagatgaataagcatagttcttagagaatacaacaatgaaaacctgagagccttcaattgc 265  Q
    |    |||||||||| | ||||| ||||| ||||||| |||  |||||||  ||||||| || || || ||||||| ||||||| ||||||||||    
T  31482284 tgaagaaggatgtataccaattcacgcaagcaccaagttgaggaagcataactcttagacaagaccacgatgaaaatctgagagacttcaattgc 31482190  T

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Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 31496476 - 31496412
Alignment:
Q  83 ttcaccataacaaccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    ||||||||||   ||||||||||||||||||  |||||| | ||||||||| |||||||||||||    
T  31496476 ttcaccataaattccactttgctttcgcaccatagaagggtcaacatcatagaaaacaggcagaa 31496412  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 31501633 - 31501582
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    |||||||||||||||||| | | ||||| ||||||||| |||||||||||||    
T  31501633 ccactttgctttcgcaccacgggaggatcaacatcatagaaaacaggcagaa 31501582  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 31162296 - 31162375
Alignment:
Q  169 tgcagttaaggatgtatgctaattctcgcaaacaccaaga--tgaataagcatagttcttagagaatacaacaatgaaaa 246  Q
    |||||| ||||||| || |||||||| |||| |||||| |  |||  |||||||||||||||| ||||| ||||||||||    
T  31162296 tgcagtgaaggatggattctaattcttgcaagcaccaatagttgaggaagcatagttcttagaaaataccacaatgaaaa 31162375  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 17438196 - 17438145
Alignment:
Q  96 ccactttgctttcgcacctcagaaggattaacatcataaaaaacaggcagaa 147  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  17438196 ccactttgctttcgcacctcagaaggatcaacatcatagaaaacaggaagaa 17438145  T

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