View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0961_low_47 (Length: 221)
Name: NF0961_low_47
Description: NF0961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0961_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 39782988 - 39783118
Alignment:
| Q |
1 |
tgtcagctcaatttcagtctcgtcgatgatctctagctcctcgtcatctgattctgcagtgtgctcctctgcaggcctttcaagatcaaatttgatttga |
100 |
Q |
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| T |
39782988 |
tgtcagctcaatttcagtctcgtcgatgatctctagcccctcgtcatctgattctgcagtgtgctcctctgcaggcctttcaagatcaaatttgatttga |
39783087 |
T |
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| Q |
101 |
gccttttcttgtccacctttataatgatgat |
131 |
Q |
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| |||||||||||||||||||| |||||||| |
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| T |
39783088 |
gtcttttcttgtccacctttatgatgatgat |
39783118 |
T |
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