View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0962_low_14 (Length: 491)

Name: NF0962_low_14
Description: NF0962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0962_low_14
NF0962_low_14
[»] scaffold0007 (2 HSPs)
scaffold0007 (155-480)||(180895-181217)
scaffold0007 (29-120)||(181217-181308)
[»] chr7 (59 HSPs)
chr7 (196-469)||(23311787-23312059)
chr7 (203-480)||(7416686-7416962)
chr7 (196-478)||(1362780-1363062)
chr7 (196-471)||(18113718-18113989)
chr7 (219-480)||(3393076-3393338)
chr7 (149-412)||(8056167-8056438)
chr7 (206-423)||(49014905-49015110)
chr7 (249-402)||(29189161-29189312)
chr7 (148-269)||(39520806-39520927)
chr7 (148-272)||(42897008-42897132)
chr7 (156-271)||(554865-554981)
chr7 (148-272)||(36202762-36202887)
chr7 (196-245)||(40041444-40041493)
chr7 (197-245)||(35159931-35159979)
chr7 (194-272)||(25969460-25969539)
chr7 (194-272)||(27353984-27354062)
chr7 (194-272)||(27555343-27555421)
chr7 (401-470)||(36891996-36892066)
chr7 (194-272)||(48163471-48163549)
chr7 (194-272)||(9250394-9250474)
chr7 (148-229)||(15878372-15878453)
chr7 (206-271)||(26973128-26973193)
chr7 (193-245)||(38064657-38064709)
chr7 (196-271)||(21409456-21409530)
chr7 (194-269)||(34122594-34122669)
chr7 (198-269)||(47720149-47720220)
chr7 (207-319)||(31189375-31189489)
chr7 (194-243)||(8028760-8028809)
chr7 (204-245)||(21179909-21179950)
chr7 (196-245)||(23970127-23970176)
chr7 (196-245)||(24956316-24956365)
chr7 (196-245)||(33454135-33454184)
chr7 (196-245)||(38064731-38064779)
chr7 (194-242)||(19820868-19820916)
chr7 (196-271)||(44960110-44960185)
chr7 (266-316)||(27687934-27687984)
chr7 (395-460)||(30404330-30404396)
chr7 (194-272)||(38263062-38263140)
chr7 (194-272)||(40095713-40095791)
chr7 (148-272)||(47238591-47238716)
chr7 (148-199)||(11829695-11829746)
chr7 (194-245)||(19510586-19510637)
chr7 (194-229)||(23079057-23079092)
chr7 (194-245)||(26773713-26773764)
chr7 (206-245)||(27688011-27688050)
chr7 (194-272)||(16850849-16850927)
chr7 (196-245)||(1043072-1043121)
chr7 (196-229)||(1400216-1400249)
chr7 (150-199)||(11058360-11058409)
chr7 (148-200)||(16564415-16564467)
chr7 (148-200)||(16601195-16601247)
chr7 (194-226)||(21179968-21180000)
chr7 (197-245)||(26845897-26845945)
chr7 (148-200)||(26845953-26846005)
chr7 (148-200)||(27398104-27398156)
chr7 (148-200)||(34238164-34238216)
chr7 (197-229)||(36757964-36757996)
chr7 (197-229)||(36767488-36767520)
chr7 (206-242)||(44269800-44269836)
[»] chr1 (49 HSPs)
chr1 (153-469)||(9092270-9092587)
chr1 (196-471)||(40776063-40776332)
chr1 (206-460)||(2222765-2223019)
chr1 (290-479)||(8829455-8829645)
chr1 (210-480)||(4812046-4812313)
chr1 (207-390)||(12158790-12158970)
chr1 (148-272)||(36367676-36367801)
chr1 (148-271)||(38218407-38218526)
chr1 (196-245)||(34432384-34432433)
chr1 (196-271)||(14167152-14167229)
chr1 (194-272)||(28949215-28949293)
chr1 (194-271)||(9781708-9781785)
chr1 (196-269)||(32381036-32381109)
chr1 (197-269)||(2364746-2364818)
chr1 (232-291)||(8829683-8829742)
chr1 (194-272)||(3426914-3426992)
chr1 (194-272)||(37104186-37104264)
chr1 (194-244)||(48715227-48715277)
chr1 (207-292)||(5368619-5368704)
chr1 (194-269)||(20409531-20409606)
chr1 (196-271)||(24851542-24851617)
chr1 (196-271)||(29168015-29168090)
chr1 (195-269)||(8132250-8132324)
chr1 (140-271)||(24590099-24590232)
chr1 (196-245)||(10822471-10822520)
chr1 (194-245)||(1043293-1043344)
chr1 (194-245)||(13012993-13013044)
chr1 (194-269)||(28659277-28659352)
chr1 (194-245)||(30323781-30323832)
chr1 (194-245)||(31653403-31653454)
chr1 (194-272)||(6916848-6916926)
chr1 (194-272)||(38330493-38330571)
chr1 (194-272)||(52895687-52895765)
chr1 (194-255)||(25256682-25256742)
chr1 (194-271)||(41675964-41676041)
chr1 (148-200)||(5984236-5984288)
chr1 (194-271)||(29861867-29861940)
chr1 (148-200)||(37346905-37346957)
chr1 (149-200)||(1036469-1036520)
chr1 (194-245)||(1036525-1036576)
chr1 (194-245)||(37346849-37346900)
chr1 (194-241)||(43189721-43189768)
chr1 (194-280)||(15417519-15417604)
chr1 (206-280)||(41027912-41027986)
chr1 (146-191)||(2364684-2364729)
chr1 (357-442)||(2604643-2604728)
chr1 (205-241)||(10763736-10763772)
chr1 (148-200)||(33039622-33039674)
chr1 (148-200)||(43189664-43189716)
[»] chr4 (54 HSPs)
chr4 (197-480)||(21637734-21638018)
chr4 (196-478)||(4400536-4400817)
chr4 (197-480)||(49069249-49069555)
chr4 (206-469)||(27981974-27982234)
chr4 (357-472)||(5409455-5409571)
chr4 (247-372)||(11891821-11891943)
chr4 (247-372)||(11892567-11892689)
chr4 (327-480)||(44121679-44121838)
chr4 (334-460)||(22492891-22493018)
chr4 (196-340)||(21058901-21059046)
chr4 (148-269)||(38492246-38492368)
chr4 (402-480)||(11891926-11892005)
chr4 (357-445)||(24016609-24016696)
chr4 (196-271)||(40694138-40694213)
chr4 (149-245)||(3403586-3403683)
chr4 (402-469)||(11892672-11892740)
chr4 (402-468)||(21059103-21059170)
chr4 (194-272)||(19738763-19738841)
chr4 (194-272)||(39957630-39957708)
chr4 (329-391)||(48006198-48006260)
chr4 (148-272)||(52122843-52122978)
chr4 (195-272)||(53322404-53322481)
chr4 (168-271)||(36943708-36943812)
chr4 (196-272)||(52721332-52721408)
chr4 (194-245)||(17892314-17892365)
chr4 (194-245)||(36511935-36511986)
chr4 (204-322)||(3691388-3691505)
chr4 (196-246)||(47607177-47607227)
chr4 (196-245)||(46431934-46431983)
chr4 (252-347)||(36561662-36561755)
chr4 (194-245)||(5325722-5325773)
chr4 (206-245)||(24793732-24793771)
chr4 (206-245)||(31946227-31946266)
chr4 (206-245)||(42630486-42630525)
chr4 (194-245)||(55901140-55901191)
chr4 (148-245)||(5834839-5834947)
chr4 (194-272)||(8064083-8064161)
chr4 (148-202)||(42472624-42472678)
chr4 (196-245)||(37992534-37992583)
chr4 (197-229)||(726504-726536)
chr4 (197-229)||(754308-754340)
chr4 (148-200)||(14795032-14795084)
chr4 (148-200)||(41145621-41145673)
chr4 (395-430)||(3691286-3691321)
chr4 (194-229)||(31946174-31946209)
chr4 (194-229)||(36511881-36511916)
chr4 (194-245)||(42472570-42472621)
chr4 (194-229)||(42630432-42630467)
chr4 (194-229)||(51858930-51858965)
chr4 (203-245)||(4119506-4119548)
chr4 (196-226)||(36943806-36943836)
chr4 (194-271)||(2586402-2586479)
chr4 (196-229)||(51858900-51858933)
chr4 (139-191)||(19738697-19738749)
[»] chr8 (40 HSPs)
chr8 (148-467)||(12357898-12358217)
chr8 (148-467)||(12359026-12359345)
chr8 (195-480)||(30804517-30804796)
chr8 (196-409)||(10349312-10349523)
chr8 (201-480)||(23265722-23265983)
chr8 (206-444)||(17702573-17702811)
chr8 (204-471)||(34139710-34139977)
chr8 (148-245)||(32638867-32638965)
chr8 (402-469)||(26513973-26514041)
chr8 (196-246)||(37372327-37372377)
chr8 (148-246)||(5539444-5539542)
chr8 (194-272)||(32759439-32759517)
chr8 (196-245)||(27886258-27886307)
chr8 (196-245)||(27944916-27944965)
chr8 (194-271)||(38388733-38388810)
chr8 (194-245)||(25022191-25022242)
chr8 (194-245)||(43771705-43771756)
chr8 (194-272)||(22201311-22201389)
chr8 (196-242)||(29355691-29355737)
chr8 (148-245)||(32424930-32425038)
chr8 (148-200)||(28876623-28876675)
chr8 (194-245)||(32877503-32877554)
chr8 (427-480)||(10349523-10349577)
chr8 (194-272)||(16384683-16384761)
chr8 (194-272)||(34901356-34901434)
chr8 (196-245)||(5818312-5818361)
chr8 (196-245)||(12580554-12580603)
chr8 (148-200)||(2872967-2873019)
chr8 (148-200)||(19436283-19436335)
chr8 (148-200)||(19572432-19572484)
chr8 (206-242)||(24100197-24100233)
chr8 (196-245)||(27968171-27968222)
chr8 (196-245)||(28025157-28025208)
chr8 (148-200)||(36483444-36483496)
chr8 (194-245)||(2872911-2872962)
chr8 (194-245)||(4246006-4246057)
chr8 (148-199)||(6028496-6028547)
chr8 (196-245)||(13422276-13422325)
chr8 (148-200)||(13422217-13422269)
chr8 (206-242)||(20182451-20182487)
[»] chr2 (50 HSPs)
chr2 (200-469)||(15880510-15880775)
chr2 (196-480)||(37134063-37134348)
chr2 (265-480)||(13289603-13289817)
chr2 (196-480)||(25933633-25933907)
chr2 (193-469)||(43214637-43214907)
chr2 (196-392)||(40497245-40497435)
chr2 (148-271)||(3563860-3563983)
chr2 (140-271)||(40536243-40536376)
chr2 (196-269)||(2319343-2319416)
chr2 (196-271)||(44156665-44156741)
chr2 (195-271)||(1005579-1005655)
chr2 (148-271)||(31236161-31236295)
chr2 (196-271)||(8482892-8482967)
chr2 (194-272)||(6124239-6124317)
chr2 (148-245)||(14824157-14824255)
chr2 (148-245)||(20536784-20536882)
chr2 (196-245)||(34146248-34146297)
chr2 (194-245)||(4561854-4561905)
chr2 (194-269)||(22484333-22484408)
chr2 (394-460)||(33737740-33737807)
chr2 (194-272)||(7876780-7876858)
chr2 (194-272)||(16561866-16561944)
chr2 (148-245)||(35342326-35342434)
chr2 (206-271)||(1776411-1776476)
chr2 (196-245)||(4355393-4355442)
chr2 (206-271)||(35996721-35996785)
chr2 (194-275)||(40308868-40308949)
chr2 (194-246)||(22571003-22571055)
chr2 (207-246)||(12206104-12206143)
chr2 (194-245)||(33324884-33324935)
chr2 (194-229)||(34146315-34146350)
chr2 (396-470)||(37354770-37354845)
chr2 (194-245)||(38602323-38602374)
chr2 (148-245)||(4170503-4170611)
chr2 (148-245)||(6497650-6497758)
chr2 (148-245)||(45159309-45159407)
chr2 (196-245)||(3545582-3545631)
chr2 (195-272)||(7807348-7807425)
chr2 (194-229)||(14217098-14217133)
chr2 (265-372)||(33741862-33741969)
chr2 (197-240)||(40432003-40432046)
chr2 (402-444)||(33741837-33741879)
chr2 (196-229)||(4561926-4561959)
chr2 (402-458)||(16219184-16219241)
chr2 (196-245)||(18301040-18301089)
chr2 (196-241)||(24585597-24585642)
chr2 (196-229)||(35342455-35342488)
chr2 (148-200)||(7807431-7807483)
chr2 (196-268)||(21104550-21104622)
chr2 (194-226)||(31236137-31236169)
[»] chr3 (61 HSPs)
chr3 (200-480)||(53165275-53165555)
chr3 (149-434)||(5271489-5271774)
chr3 (317-480)||(3983851-3984015)
chr3 (325-478)||(30226647-30226801)
chr3 (206-470)||(15769005-15769250)
chr3 (261-457)||(7754200-7754399)
chr3 (194-333)||(30226486-30226622)
chr3 (148-245)||(47642026-47642123)
chr3 (334-470)||(1553716-1553853)
chr3 (196-272)||(22289695-22289771)
chr3 (196-271)||(25700828-25700904)
chr3 (148-271)||(55268991-55269121)
chr3 (148-274)||(10225134-10225260)
chr3 (148-272)||(2567372-2567496)
chr3 (196-282)||(3983765-3983852)
chr3 (149-271)||(19879078-19879201)
chr3 (194-271)||(21157704-21157781)
chr3 (148-272)||(22611358-22611483)
chr3 (196-271)||(19421484-19421559)
chr3 (196-438)||(21382140-21382382)
chr3 (148-269)||(53192507-53192629)
chr3 (194-271)||(13748423-13748499)
chr3 (196-245)||(48333148-48333197)
chr3 (194-245)||(28968576-28968627)
chr3 (194-245)||(42229740-42229791)
chr3 (196-246)||(983262-983312)
chr3 (196-245)||(2122775-2122824)
chr3 (357-442)||(29715870-29715955)
chr3 (196-271)||(6134357-6134432)
chr3 (206-245)||(30787563-30787602)
chr3 (194-272)||(37996785-37996863)
chr3 (196-242)||(48334091-48334137)
chr3 (196-245)||(7899720-7899769)
chr3 (196-245)||(41742073-41742122)
chr3 (194-245)||(1679699-1679750)
chr3 (194-269)||(7327778-7327853)
chr3 (148-246)||(13353196-13353295)
chr3 (194-245)||(35389816-35389867)
chr3 (194-245)||(40497396-40497447)
chr3 (194-245)||(52684267-52684318)
chr3 (148-245)||(1528511-1528609)
chr3 (148-241)||(19349605-19349699)
chr3 (148-202)||(40497339-40497393)
chr3 (206-271)||(45347375-45347441)
chr3 (194-226)||(21157680-21157712)
chr3 (148-200)||(42464964-42465016)
chr3 (194-229)||(25700896-25700931)
chr3 (194-245)||(28882679-28882730)
chr3 (194-245)||(33240016-33240067)
chr3 (194-253)||(39664024-39664083)
chr3 (194-245)||(45532981-45533032)
chr3 (194-269)||(48122891-48122966)
chr3 (194-245)||(52121246-52121297)
chr3 (394-444)||(3116648-3116698)
chr3 (196-229)||(13353143-13353176)
chr3 (359-424)||(47118193-47118258)
chr3 (196-229)||(47642143-47642176)
chr3 (194-283)||(52505797-52505885)
chr3 (148-200)||(6134439-6134491)
chr3 (194-226)||(45347433-45347465)
chr3 (148-200)||(48122834-48122886)
[»] scaffold0240 (1 HSPs)
scaffold0240 (194-473)||(10666-10944)
[»] chr5 (52 HSPs)
chr5 (194-480)||(12190451-12190731)
chr5 (194-472)||(41472394-41472665)
chr5 (252-465)||(31036784-31036996)
chr5 (148-269)||(12852128-12852249)
chr5 (398-480)||(17916605-17916688)
chr5 (211-414)||(19321456-19321658)
chr5 (148-245)||(6243170-6243267)
chr5 (148-245)||(7629079-7629176)
chr5 (148-274)||(26794976-26795102)
chr5 (196-271)||(26691684-26691759)
chr5 (196-271)||(26961416-26961491)
chr5 (194-271)||(5612417-5612494)
chr5 (196-271)||(26716341-26716416)
chr5 (196-271)||(26986081-26986156)
chr5 (194-271)||(1795458-1795536)
chr5 (148-245)||(30284608-30284716)
chr5 (194-272)||(39690737-39690815)
chr5 (194-272)||(30777495-30777574)
chr5 (196-245)||(3934789-3934838)
chr5 (196-245)||(17138255-17138304)
chr5 (196-245)||(34032437-34032486)
chr5 (393-460)||(21317404-21317472)
chr5 (194-245)||(11906284-11906335)
chr5 (197-272)||(18001939-18002014)
chr5 (148-271)||(27938172-27938302)
chr5 (194-272)||(32707805-32707883)
chr5 (196-245)||(3701266-3701315)
chr5 (148-200)||(1639839-1639891)
chr5 (196-255)||(21251533-21251592)
chr5 (196-271)||(43357734-43357809)
chr5 (196-246)||(1920904-1920954)
chr5 (194-272)||(32624943-32625021)
chr5 (146-200)||(41392769-41392823)
chr5 (216-301)||(36785088-36785172)
chr5 (206-242)||(1920972-1921008)
chr5 (194-226)||(5612393-5612425)
chr5 (148-200)||(30918387-30918439)
chr5 (148-200)||(33829762-33829814)
chr5 (194-245)||(5722053-5722104)
chr5 (194-245)||(5986069-5986120)
chr5 (194-269)||(9653831-9653906)
chr5 (194-245)||(9792385-9792436)
chr5 (394-460)||(19102001-19102068)
chr5 (194-229)||(26716408-26716443)
chr5 (194-229)||(26986148-26986183)
chr5 (194-245)||(32728710-32728761)
chr5 (206-292)||(21317236-21317322)
chr5 (196-229)||(17138202-17138235)
chr5 (196-245)||(27085432-27085481)
chr5 (196-241)||(33829821-33829866)
chr5 (334-378)||(10153833-10153877)
chr5 (206-269)||(15066216-15066280)
[»] chr6 (23 HSPs)
chr6 (219-480)||(26560890-26561141)
chr6 (148-271)||(31079621-31079745)
chr6 (148-246)||(10894583-10894681)
chr6 (194-271)||(19128219-19128296)
chr6 (194-269)||(3212543-3212618)
chr6 (148-246)||(7254939-7255038)
chr6 (194-272)||(31195843-31195921)
chr6 (196-245)||(7188780-7188829)
chr6 (206-251)||(10894516-10894561)
chr6 (408-471)||(2423031-2423095)
chr6 (195-271)||(11105353-11105429)
chr6 (194-245)||(26327221-26327271)
chr6 (194-271)||(234372-234452)
chr6 (194-272)||(1036800-1036878)
chr6 (194-272)||(8357024-8357102)
chr6 (204-250)||(13607781-13607827)
chr6 (195-245)||(32130660-32130710)
chr6 (197-246)||(27084054-27084103)
chr6 (252-296)||(9421103-9421147)
chr6 (196-235)||(31079739-31079778)
chr6 (211-245)||(6708042-6708076)
chr6 (195-229)||(10894467-10894501)
chr6 (196-229)||(7255058-7255091)
[»] scaffold0112 (1 HSPs)
scaffold0112 (148-245)||(42077-42174)
[»] scaffold0177 (1 HSPs)
scaffold0177 (148-245)||(25542-25639)
[»] scaffold0037 (1 HSPs)
scaffold0037 (148-268)||(27769-27890)
[»] scaffold0285 (1 HSPs)
scaffold0285 (196-267)||(13318-13388)
[»] scaffold0060 (1 HSPs)
scaffold0060 (194-245)||(30445-30496)
[»] scaffold0006 (1 HSPs)
scaffold0006 (358-438)||(36568-36648)
[»] scaffold0640 (1 HSPs)
scaffold0640 (194-245)||(8093-8144)
[»] scaffold0250 (1 HSPs)
scaffold0250 (194-245)||(5578-5629)
[»] scaffold0406 (1 HSPs)
scaffold0406 (148-241)||(13875-13969)
[»] scaffold0005 (1 HSPs)
scaffold0005 (148-200)||(44647-44699)
[»] scaffold0886 (1 HSPs)
scaffold0886 (358-438)||(2884-2964)


Alignment Details
Target: scaffold0007 (Bit Score: 255; Significance: 1e-142; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 155 - 480
Target Start/End: Complemental strand, 181217 - 180895
Alignment:
Q  155 caaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaa 254  Q
    |||||||||||  |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  181217 caaaatggatat-gtaccgtatcccatacgtaacatgtaccgatacttcctgatacgtatcaggagagttttcgaagattaaattttatttatttttaaa 181119  T
Q  255 acaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagt 354  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  181118 acaatcatccgatacttttcagatacatctgggatac--gagggataggcagtggaaaaccgatatgtgcgggctacctgatgtttctattatatttggt 181021  T
Q  355 acatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaatatacttacattt 454  Q
    | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  181020 atatatgtaattgactaagtaatgatgatttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaatatacttacattt 180921  T
Q  455 atatttatattgttgtcgtcgtctgt 480  Q
     |||||||||||||||||||||||||    
T  180920 ttatttatattgttgtcgtcgtctgt 180895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 181308 - 181217
Alignment:
Q  29 aatctagtcacccttattcgtaacattatcgtcataaaaccaatgacatggaggatggaaaaagaaaatcccttatcagtttaagagtgggc 120  Q
    |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  181308 aatctattcacccttattcgttacattatcgtcataaaaccaataacatggaggatggaaaaagaaattcccttatcagtttaagagtgggc 181217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 1e-94; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 196 - 469
Target Start/End: Original strand, 23311787 - 23312059
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||||||| |||  ||||||||||||||||||||||||||  ||    
T  23311787 gatacttcccgatatgtatcaggagagtatccgaagattaaattttattttttttaaaaacaattatctaatacttttcagatacatctgggatac--ga 23311884  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagga 395  Q
    |||||| || ||||||||||||||||| | |||| | ||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||| ||    
T  23311885 gggataggcggtggaaaaccgatatgtgcaggctgcttgatgtttctattatattttgtatatatgtaattgactaagtaatgatgttttctatttatga 23311984  T
Q  396 tatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttg 469  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23311985 tatatcatatatgtagttgactaattgtcgctttctttattatcaatattacttacattcatatttatattgttg 23312059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 203 - 480
Target Start/End: Original strand, 7416686 - 7416962
Alignment:
Q  203 cctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataa 302  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||| |||||||||||||||||  ||| ||||     
T  7416686 cctgatacgtatcaggagagtatccgaagattaaattttattttattttaaaacaattatctgatactttttagatacatctgggatac--gagcgatag 7416783  T
Q  303 gcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatca 402  Q
    || |||||||||||| |||| | ||||||||||||||| |||||||||| ||| || |||||||||||||||||| ||  ||||||||||||||||||||    
T  7416784 gcggtggaaaaccgagatgtgcaggctacctgatgtttttattatatttggtatatttgtaattgactaagtaattatgttttctatttaggatatatca 7416883  T
Q  403 tatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||  ||||||||    
T  7416884 tatatgtaattgactaattgttgctttctttattatcaatattacttacatttatatctctattgttgtattcgtctgt 7416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 196 - 478
Target Start/End: Complemental strand, 1363062 - 1362780
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaa-caatcatccgatacttttcagatacatctgggatacacg 294  Q
    ||||||||  ||||||||||||||||||||||||| || ||||||||||| |||  |||| |||| || |||||||||||||||||||||||||||   |    
T  1363062 gatacttctcgatacgtatcaggagagtatccgaatatgaaattttatttttttaaaaaaacaattatgcgatacttttcagatacatctgggataa--g 1362965  T
Q  295 agggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagg 394  Q
    || |||| |  ||||||||| ||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  1362964 agcgataggaggtggaaaactgatatgtgcgggctacctgatgtttctatcatatttggtatatatgtaattgactaagtaatgatgttttctatttagg 1362865  T
Q  395 atatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtct 478  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||| || |||||||||||||| ||||||||| |||||||    
T  1362864 atatatcacatatgtaattgactaattttcgctttctttattattaatattagttacatttatatttctattgttgttgtcgtct 1362780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 196 - 471
Target Start/End: Complemental strand, 18113989 - 18113718
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |    |||| ||  ||||||||||||||| |||||||||| |||||  |    
T  18113989 gatacttcctgatatgtatcaggagagtatctgaagattaaattttatttttaaaaaaaataagtatccgatacttttcaaatacatctgg-ataca--a 18113893  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagga 395  Q
    ||||||||| ||| ||||| |||||||  |||||||||||||||| |||||||||| ||   ||||| ||||||||||||||||   |||||||||||||    
T  18113892 gggataagcggtgaaaaactgatatgtgagggctacctgatgtttatattatatttggtt--tatgtgattgactaagtaatgaggttttctatttagga 18113795  T
Q  396 tatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtc 471  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||  ||||||||||    
T  18113794 tatatcatatatgtaattgactaattgtcgctttctttattataaatattatttacatttatattactattgttgtc 18113718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 219 - 480
Target Start/End: Original strand, 3393076 - 3393338
Alignment:
Q  219 agagtatccgaagattaaattttatttatttttaaaa-caatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccga 317  Q
    ||||||||||||||||||||||||||||     |||| |||| |||||||| ||| ||||||||||||||||||  || |||||  | |||||||| |||    
T  3393076 agagtatccgaagattaaattttatttaaaaaaaaaaacaattatccgatattttccagatacatctgggatac--gaaggatagacggtggaaaatcga 3393173  T
Q  318 tatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatact-ttctatttaggatatatcatatatgtaattgac 416  Q
    ||||| || | || |||||||||||||||||||| ||| ||||||||||||||||||||||||  | || |||||||||||||| |||||||||||||||    
T  3393174 tatgtgcgagttatctgatgtttctattatatttggtatatatgtaattgactaagtaatgatgttcttttatttaggatatattatatatgtaattgac 3393273  T
Q  417 taattgtcgctttctttattatcaat-atacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||| || |||||||    
T  3393274 taattgtcgctttctttattatcaatcttacttacatttatatttctattgttgccgccgtctgt 3393338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 149 - 412
Target Start/End: Complemental strand, 8056438 - 8056167
Alignment:
Q  149 atacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgat-------acttcctgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    |||||||||||||||| |||||| ||||||  |||||| | |||||||||       |||| | ||||||||||||||||||||| ||||||||||||||    
T  8056438 atacttcaaaatggatgacgtaccgtatcctttgcgtatcttgtaccgatgtctggtactttccgatacgtatcaggagagtatctgaagattaaatttt 8056339  T
Q  242 atttatt---tttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgt 338  Q
    |||| ||   || || | ||| ||||||||||||||| |||||| | ||||||  |||||||||||  ||||||||| |||||| |  ||||||||||||    
T  8056338 attttttaatttcaagataattatccgatacttttcatatacatttaggatac--gagggataagcgatggaaaaccaatatgtgcaagctacctgatgt 8056241  T
Q  339 ttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaat 412  Q
    ||||||||||||| ||| || |||||||||||||| ||||||  ||| |||||| |||||||||||||||||||    
T  8056240 ttctattatatttggtatatttgtaattgactaagcaatgatgttttttatttatgatatatcatatatgtaat 8056167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 206 - 423
Target Start/End: Complemental strand, 49015110 - 49014905
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagca 305  Q
    |||||||||||| ||||||||| | ||||||||||||||| |||| |||||||| ||||||||||||||| |||||| |||||||   ||| |||| ||     
T  49015110 gatacgtatcagaagagtatccaacgattaaattttattttttttaaaaacaattatccgatacttttcaaatacatttgggatat--gagcgataggcg 49015013  T
Q  306 gtggaaaaccgatatgtacgggctacctgatgt-ttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcata 404  Q
    ||||||||||||||           | |||||| ||||||||||||| ||| ||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  49015012 gtggaaaaccgata-----------catgatgtgttctattatatttggtatatatgtaattgactaagtaatgatgttttatatttaggatatatcata 49014924  T
Q  405 tatgtaattgactaattgt 423  Q
    |||||||||||||||||||    
T  49014923 tatgtaattgactaattgt 49014905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 249 - 402
Target Start/End: Complemental strand, 29189312 - 29189161
Alignment:
Q  249 tttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattata 348  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||  ||| |||| || ||||||||| ||||||| ||||||||| ||| |||||||||||    
T  29189312 tttaaaataattatccgatacttttaagatacatctgggatac--gagcgatatgcggtggaaaactgatatgtgcgggctaccagatatttctattata 29189215  T
Q  349 tttagtacatatgtaattgactaagtaatgatactttctatttaggatatatca 402  Q
    ||| ||||| ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  29189214 tttggtacacatgtaattgactacgtaatgatattttttatttaggatatatca 29189161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 39520806 - 39520927
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||||||| |||||||||| ||||||||||| || |||||||||||||| |    
T  39520806 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttcccgatacgtatccggagagtatccaaatattaaattttattttt 39520905  T
Q  248 ttttaaaacaatcatccgatac 269  Q
    ||| |||| ||| |||||||||    
T  39520906 tttaaaaataattatccgatac 39520927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 42897008 - 42897132
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||||||| |||||||||| ||||||||||| || |||||||||||||| |    
T  42897008 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttcccgatacgtatccggagagtatccaaatattaaattttattttt 42897107  T
Q  248 ttttaaaacaatcatccgatacttt 272  Q
    ||  |||| ||| ||||||||||||    
T  42897108 ttaaaaaataattatccgatacttt 42897132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 554981 - 554865
Alignment:
Q  156 aaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-ttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaa 254  Q
    ||||| ||| |||||  ||||||| || ||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||    
T  554981 aaaatagatgacgtatcgtatcccctgtgtatcctgcaccgataccttcctgatacgtatcaggagagtattcgaagattaaattttattttttttaaaa 554882  T
Q  255 acaatcatccgatactt 271  Q
    | ||| |||||||||||    
T  554881 ataattatccgatactt 554865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 36202887 - 36202762
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||| | | || |||||||||| ||||||||||| || ||||||||||||||     
T  36202887 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctgcccgatacgtatccggagagtatccaaatattaaattttatttt 36202788  T
Q  247 tttttaaaacaatcatccgatacttt 272  Q
    |||  |||| ||| ||| ||||||||    
T  36202787 tttaaaaaataattatctgatacttt 36202762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 40041444 - 40041493
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40041444 gatacttcttgatacgtatcaggagagtatccgaagattaaattttattt 40041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 35159931 - 35159979
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35159931 atacttcccgatacgtatcaggagagtatccgaagattaaattttattt 35159979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 25969460 - 25969539
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttt-taaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||| ||||| ||| ||||||||||||    
T  25969460 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattttttttataaaataattatccgatacttt 25969539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 27353984 - 27354062
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  27353984 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 27354062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 27555421 - 27555343
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  27555421 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 27555343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 36891996 - 36892066
Alignment:
Q  401 catatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgt 470  Q
    |||||||||||||||||||||| | |||| ||||||||||||| |||||| |||||||||||| |||||||    
T  36891996 catatatgtaattgactaattgacactttatttattatcaatattacttatatttatatttatgttgttgt 36892066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 48163471 - 48163549
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  48163471 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 48163549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 9250474 - 9250394
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttattt--ttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||||| ||| ||||||||||||    
T  9250474 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattttttttattaaaataattatccgatacttt 9250394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 15878453 - 15878372
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccga 229  Q
    |||||||||||| |||| | |||| ||||||| | |||| ||| ||||||||||| | ||||||||||||||||||||||||    
T  15878453 gatacttcaaaacggatgatgtaccgtatcccctacgtatcctataccgatactttccgatacgtatcaggagagtatccga 15878372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 26973128 - 26973193
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||| ||| ||| |||||||||||    
T  26973128 gatacgtatcagaagagtatccgaagattaaatttttttttttttttaaataattatccgatactt 26973193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 38064657 - 38064709
Alignment:
Q  193 accgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  38064657 accgatactttccgatacgtatcaggagagtatccgaagattaaattatattt 38064709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 21409456 - 21409530
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||||| |||| |||| ||| ||| |||||||    
T  21409456 gatacatcccgatacgtatcaggagagtatccaaagattaaattttattt-ttttaaaaataattatcggatactt 21409530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 34122669 - 34122594
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||| |||| ||| |||| ||||    
T  34122669 ccgatacttcccgatacgtatctggagagtatccaaatattaaattttattttttttaaaaataattatccaatac 34122594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 47720220 - 47720149
Alignment:
Q  198 tacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||| |||  |||| ||| |||||||||    
T  47720220 tacttcccgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatac 47720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 31189375 - 31189489
Alignment:
Q  207 atacgtatcaggagagtatccgaagattaaattttattt-atttttaaaac-aatcatccgatacttttcagatacatctgggatacacgagggataagc 304  Q
    ||||||||| | ||||||||| ||||||||||| ||||| ||||||||||  ||| ||||| ||||||||||||||||  ||||||  | ||||||| ||    
T  31189375 atacgtatcggaagagtatccaaagattaaattatattttatttttaaaaataattatccgctacttttcagatacattggggataagctagggatatgc 31189474  T
Q  305 agtggaaaaccgata 319  Q
     ||| ||||||||||    
T  31189475 ggtgaaaaaccgata 31189489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 8028760 - 8028809
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttat 243  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  8028760 ccgatacttcctgatacgtatcgggagagtatccaaatattaaattttat 8028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 21179909 - 21179950
Alignment:
Q  204 ctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  21179909 ctgatatgtatcaggagagtatccgaagattaaattttattt 21179950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 23970176 - 23970127
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  23970176 gatacttcctgatacgtattagaagagtatctgaagattaaattttattt 23970127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 24956316 - 24956365
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  24956316 gatactttccgatacgtatcaagagagtatccgaagattaaattttattt 24956365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 33454135 - 33454184
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  33454135 gatacttctcgatacgtatcaggaaagtatccgaagattaaattttattt 33454184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 38064731 - 38064779
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  38064731 gatacttcc-gatacgtatcaagagagtatccgaagattaaattttattt 38064779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 19820916 - 19820868
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaatttta 242  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  19820916 ccgatactttccgatatgtatcaggagagtatccgaagattaaatttta 19820868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 44960185 - 44960110
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||| ||||||| ||||||||| ||||||||||||||||| || | |||| ||| ||| |||||||    
T  44960185 gatacttcccgatatgtatcagaagagtatccaaagattaaattttattttttgtaaaaataattatcggatactt 44960110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 27687984 - 27687934
Alignment:
Q  266 atacttttcagatacatctgggatacacgagggataagcagtggaaaaccg 316  Q
    |||||||||||||||||| ||||||||||||||||| || | |||||||||    
T  27687984 atacttttcagatacatcggggatacacgagggataggcggaggaaaaccg 27687934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 460
Target Start/End: Original strand, 30404330 - 30404396
Alignment:
Q  395 atatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatattt 460  Q
    ||||||||||||| |||||||||||||||   ||||||||||||||||| |||||  ||||||||||    
T  30404330 atatatcatatatataattgactaattgtttttttctttattatcaatattacttgtatttatattt 30404396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 38263062 - 38263140
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||| ||||||||    
T  38263062 ccgatactttccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatctgatacttt 38263140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 40095713 - 40095791
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  40095713 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 40095791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 47238716 - 47238591
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| | |||  ||||||| ||||||   || |||||||| | || |||| ||||| ||||||||||| || ||||||||||||||     
T  47238716 gatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctgcccgatatgtatctggagagtatccaaatattaaattttatttt 47238617  T
Q  247 tttttaaaacaatcatccgatacttt 272  Q
    |||  |||| ||| |||||| |||||    
T  47238616 tttaaaaaataattatccgacacttt 47238591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 11829695 - 11829746
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata 199  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||    
T  11829695 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 11829746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 19510586 - 19510637
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||| ||||| || |||||||| || ||||||||||||||    
T  19510586 ccgatacttcctgatatgtatcgggtgagtatccaaatattaaattttattt 19510637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 23079092 - 23079057
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  23079092 ccgatacttcccgatacgtatcaggagagtatccga 23079057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 26773764 - 26773713
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||  |||||||||| ||||||||||| || ||||||||||||||    
T  26773764 ccgatacttctcgatacgtatcgggagagtatccaaatattaaattttattt 26773713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 27688050 - 27688011
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  27688050 gatacgtataagaagagtatccgaagattaaattttattt 27688011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 16850849 - 16850927
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| | ||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  16850849 ccgatactttccgatacgtatctgaagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 16850927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 1043121 - 1043072
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||| | |||||||||| ||||||||||| || ||||||||||||||    
T  1043121 gatactttccgatacgtatcgggagagtatccaaatattaaattttattt 1043072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 1400249 - 1400216
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  1400249 gatacttcccgatacgtatcaggagagtatccga 1400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 11058360 - 11058409
Alignment:
Q  150 tacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata 199  Q
    ||||||||||||||| |||||| ||||||| |||||| |||| |||||||    
T  11058360 tacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 11058409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 16564467 - 16564415
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| ||||  |||||||    
T  16564467 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgccccgatac 16564415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 16601195 - 16601247
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| ||||  |||||||    
T  16601195 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgccccgatac 16601247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 21179968 - 21180000
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatc 226  Q
    ||||||||||| |||||||||||||||||||||    
T  21179968 ccgatacttcccgatacgtatcaggagagtatc 21180000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 26845945 - 26845897
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||| |||||||||  ||||||||||| || ||||||||||||||    
T  26845945 atacttcccgatacgtatttggagagtatccaaatattaaattttattt 26845897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 26846005 - 26845953
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| | |||| ||||| |||||||| |||| ||||||||    
T  26846005 gatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatac 26845953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 27398156 - 27398104
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||| ||||||||| |||||||||||||| |||||| |||| || |||||    
T  27398156 gatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatac 27398104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 34238164 - 34238216
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| ||||||  ||| ||||||||    
T  34238164 gatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatac 34238216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 36757996 - 36757964
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccga 229  Q
    |||||||| ||||||||||||||||||||||||    
T  36757996 atacttcccgatacgtatcaggagagtatccga 36757964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 36767520 - 36767488
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccga 229  Q
    |||||||| ||||||||||||||||||||||||    
T  36767520 atacttcccgatacgtatcaggagagtatccga 36767488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 44269800 - 44269836
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaatttta 242  Q
    |||||||||||| |||||||| |||||||||||||||    
T  44269800 gatacgtatcagtagagtatctgaagattaaatttta 44269836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 8e-93; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 153 - 469
Target Start/End: Complemental strand, 9092587 - 9092270
Alignment:
Q  153 ttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttatttattttt 251  Q
    |||||||||||| ||||||||||||| ||| ||| |||| |   |||| | |||||||||||||||||||||||||||||||||||||||||||||||      
T  9092587 ttcaaaatggatgacgtactgtatcctatgtgtatcctgcagtcatacctgcctgatacgtatcaggagagtatccgaagattaaattttatttatttaa 9092488  T
Q  252 aaaa-caatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatt 350  Q
    |||| |||| ||| |||||||||||||| |||||| |||||  |||||||| || |||||||||||||||||  ||||||||||||||||||||||||||    
T  9092487 aaaaacaattatctgatacttttcagatgcatctgagatac--gagggataggcggtggaaaaccgatatgtgtgggctacctgatgtttctattatatt 9092390  T
Q  351 tagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tactta 449  Q
    | ||| ||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  9092389 tggtatatatgtaattgactaggtaatgatgttttctatttagaatatatcatatatgtaatttactaattgtcgatttctttattatcaatattactta 9092290  T
Q  450 catttatatttatattgttg 469  Q
    ||||||||||| ||||||||    
T  9092289 catttatatttctattgttg 9092270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 196 - 471
Target Start/End: Original strand, 40776063 - 40776332
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||| |||  |||||||| |||||||||||||| ||||||||||||||  ||||    
T  40776063 gatacttctcgatacgtatcaggcgagtatccgaagattaaattttatttttttaaaaaacaattatccgatacttttctgatacatctgggat--acga 40776160  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagga 395  Q
    |||||| |  |||||||||| |||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  40776161 gggataggtggtggaaaaccaatatatgcgggctacctgatgtttctattatatttggtatatatgtaattgactaagtaatgat-gtctctatttagga 40776259  T
Q  396 tatatcatatatgtaattgactaattgtcgctttctttattatcaatat-acttacatttatatttatattgttgtc 471  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||| |||||||||||||||| ||||||||||    
T  40776260 tatatcatatatgtaattgactaattttcgctttc----ttatcaatatcacttacatttatatttctattgttgtc 40776332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 206 - 460
Target Start/End: Complemental strand, 2223019 - 2222765
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaa-tcatccgatacttttcagatacatctgggatacacgagggataagc 304  Q
    ||||||||||||||||||||| |||||||||||||||||||     |||| || | |||||||| ||||||||||||||||||||||  ||||| || ||    
T  2223019 gatacgtatcaggagagtatctgaagattaaattttatttaaaaaaaaaaaaaattatccgatatttttcagatacatctgggatac--gaggggtaggc 2222922  T
Q  305 agtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcata 404  Q
     ||||||||| ||||||| ||||||||||| |||||||||||||||| ||| | ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  2222921 ggtggaaaactgatatgtgcgggctacctggtgtttctattatatttggtataaatgtaattgactaagtaattatgttttctatttaggatatatcata 2222822  T
Q  405 tatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatattt 460  Q
    ||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  2222821 tatgtaattgattaattgtcgctttctttattatcaatattagttacatttatattt 2222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 290 - 479
Target Start/End: Complemental strand, 8829645 - 8829455
Alignment:
Q  290 acacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctat 389  Q
    ||||||| |||| |||||| ||| ||||||||| ||||||||||||  |||||||||||||| ||| |||||||||||||||||||||  |  | |||||    
T  8829645 acacgagtgataggcagtgaaaatccgatatgtgcgggctacctgacatttctattatatttggtatatatgtaattgactaagtaattgtgttctctat 8829546  T
Q  390 ttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctg 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  8829545 ttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaatattacttacatttatatttctattgttgtcgccgtctg 8829455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 210 - 480
Target Start/End: Original strand, 4812046 - 4812313
Alignment:
Q  210 cgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtgg 309  Q
    |||||||  |||||||||||| ||||||||||||||      |||||||| |||| ||||||||| |||| |||||||||||  ||  |||| |  ||||    
T  4812046 cgtatcaaaagagtatccgaaaattaaattttattttaaaaaaaaacaattatccaatacttttc-gatatatctgggatac--gaacgataggaggtgg 4812142  T
Q  310 aaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgt 409  Q
    ||||| ||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||| ||||| ||  ||| ||||||||    
T  4812143 aaaacagatatgtgcggactacctgatatttctattatatttagtatatatgtaattgactaagtaatgatgttttcaatttatga-gtattatatatgt 4812241  T
Q  410 aattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| || |||||||    
T  4812242 aattaactaattgtcgctttctttattatcaatattacttacatttatatttctattattgccgccgtctgt 4812313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 207 - 390
Target Start/End: Original strand, 12158790 - 12158970
Alignment:
Q  207 atacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcag 306  Q
    |||| |||||| ||| ||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||| |||||||   || || || |      
T  12158790 atacatatcagaagattatccgaagattaaattttattt-tttaaaaaacaattatccgatacttttcagatacatcagggatact--agcgacaaacga 12158886  T
Q  307 tggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatt 390  Q
    |||||||| ||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  12158887 tggaaaactgatatgtgcaggctacctgatgtttctattatatttggtatatatgtaattgactaagtaatgatgttttctatt 12158970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 36367801 - 36367676
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| ||||||| || || |||||||||| ||||||||||| || ||||||||||||||     
T  36367801 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaattttatttt 36367702  T
Q  247 tttttaaaacaatcatccgatacttt 272  Q
    |||  |||| ||| ||||||||||||    
T  36367701 tttaaaaaataattatccgatacttt 36367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 38218407 - 38218526
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||||||||||||| |||||| ||||||| |||||| |     |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |    
T  38218407 gatacttcaaaatggatgacgtaccgtatcccttgcgtatct----ccgatacttcttgatacgtatcagaagagtatccgaagattaaattttattttt 38218502  T
Q  248 ttttaaaacaatcatccgatactt 271  Q
    ||  |||| ||| || ||||||||    
T  38218503 ttaaaaaataattattcgatactt 38218526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 34432433 - 34432384
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34432433 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 34432384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 14167152 - 14167229
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt--atttttaaaacaatcatccgatactt 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||| || ||||||||    
T  14167152 gatacttcctgatacgtatcagaagagtatccgaagattaaattttattttattttttaaaataattattcgatactt 14167229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 28949293 - 28949215
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  28949293 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 28949215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 9781708 - 9781785
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| | |||||||||||| |||||||||||||||||| |||| ||| ||||||||| ||| |||||||||||    
T  9781708 ccgatactttccgatacgtatcagaagagtatccgaagattaatttttttttttttttaaaataattatccgatactt 9781785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 32381109 - 32381036
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| |||  |||| ||| |||||||||    
T  32381109 gatacttcccaatacgtatcaggagagtatccgaagattaaattttatttttttaaaaaataattatccgatac 32381036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 2364746 - 2364818
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||| |||| |||| ||| |||||||||    
T  2364746 atactttccgatacgtatcagaagagtatccgaagattaaattttattttttttaaaaataattatccgatac 2364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 8829742 - 8829683
Alignment:
Q  232 attaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatac 291  Q
    |||||||||||||| |||  |||||||| |||||||||||||||||||||||||||||||    
T  8829742 attaaattttatttttttaaaaaacaattatccgatacttttcagatacatctgggatac 8829683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 3426914 - 3426992
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  3426914 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 3426992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 37104186 - 37104264
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  37104186 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 37104264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 48715277 - 48715227
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatt 244  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  48715277 ccgatacttcccgatacgtatcaggagagtgtccgaagattaaattttatt 48715227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 5368619 - 5368704
Alignment:
Q  207 atacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggataca 292  Q
    ||||||||| |||||||||||||| ||| ||| |||||| || | ||||||||  ||||||||||||||||||||||  |||||||    
T  5368619 atacgtatctggagagtatccgaaaattgaatcttattttttataaaaacaattgtccgatacttttcagatacatcgaggataca 5368704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 20409606 - 20409531
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| |||||||||    
T  20409606 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatac 20409531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 24851542 - 24851617
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||||||||| |||  |||| ||| |||||||||||    
T  24851542 gatacttcctaatacatatcaagagagtatccaaagattaaattttatttttttaaaaaataattatccgatactt 24851617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 29168015 - 29168090
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||| |||  |||| ||| ||| |||||||    
T  29168015 gatacttcccgttacgtatcaggagagtatccgaagattaaatttaatttttttaaaaaataattatctgatactt 29168090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 8132250 - 8132324
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    |||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| |||||||||    
T  8132250 cgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatac 8132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 24590232 - 24590099
Alignment:
Q  140 gaagcgcagatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt--cctgatacgtatcaggagagtatccgaagattaaa 237  Q
    ||||||| |||||||||||| ||||  ||||| |||| || |||||| |||| || ||||| |  || ||||||||||| ||||||||  ||||||||||    
T  24590232 gaagcgccgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgcactgatacctgccccgatacgtatcaagagagtatttgaagattaaa 24590133  T
Q  238 ttttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||| |||  |||| ||| ||| |||||||    
T  24590132 ttttatttttttaaaaaataattatctgatactt 24590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 10822471 - 10822520
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  10822471 gatacttcccgatacatctcaggagagtatccgaagattaaattttattt 10822520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 1043293 - 1043344
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  1043293 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 1043344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 13013044 - 13012993
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  13013044 ccgatacttcccgatacgtatcgggagagtatccaaatattaaattttattt 13012993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 28659352 - 28659277
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||| | |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| |||||||||    
T  28659352 ccgatactttccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatac 28659277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 30323781 - 30323832
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  30323781 ccgatacttcccgatacgtatctggagagtatccaaatattaaattttattt 30323832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 31653454 - 31653403
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  31653454 ccgatacttcccgatacgtatcgggagagtatccaaatattaaattttattt 31653403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 6916926 - 6916848
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  6916926 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 6916848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 38330493 - 38330571
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  38330493 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 38330571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 52895765 - 52895687
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  52895765 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 52895687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 25256682 - 25256742
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaa 255  Q
    ||||||||||| |||||||||| ||||||||| | || |||||||||||||| |||||||||    
T  25256682 ccgatacttcccgatacgtatccggagagtattcaaatattaaattttattt-tttttaaaa 25256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 41676041 - 41675964
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||||||| ||| ||||  | ||||||||||||||||||||||||||| |||  |||| ||| |||| ||||||    
T  41676041 ccgatacttcctaatatgtattggaagagtatccgaagattaaattttatttttttaaaaaataattatccaatactt 41675964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 5984236 - 5984288
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||||||||||| ||||||  ||| ||||||||    
T  5984236 gatacttcaaaatggatgacgtactgtatcccctgcgtattctgcaccgatac 5984288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 29861867 - 29861940
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| | |||||||||||| |||||||||||||||    |||||||| ||||| ||| ||| |||||||||||    
T  29861867 ccgatactttccgatacgtatcagaagagtatccgaagat----ttttattttttttttaaataattatccgatactt 29861940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 37346957 - 37346905
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  37346957 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 37346905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 1036469 - 1036520
Alignment:
Q  149 atacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    |||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  1036469 atacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 1036520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 1036525 - 1036576
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| | |||||||||| ||||||||||| || ||||||||||||||    
T  1036525 ccgatactttccgatacgtatccggagagtatccaaatattaaattttattt 1036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 37346900 - 37346849
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| || |||||||| || ||||||||||||||    
T  37346900 ccgatacttcccgatacgtatcgggggagtatccaaatattaaattttattt 37346849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 43189721 - 43189768
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    ||||||||||  |||||||||||||||||||||| || ||||||||||    
T  43189721 ccgatacttctcgatacgtatcaggagagtatccaaatattaaatttt 43189768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 15417519 - 15417604
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatac 280  Q
    ||||||||||  ||||| |||| | |||||||| ||  |||||||||||||||||||| ||| ||| |||||||| ||||| |||||    
T  15417519 ccgatacttctcgatacatatcggaagagtatcagatcattaaattttatttattttt-aaataattatccgatatttttctgatac 15417604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 41027986 - 41027912
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatac 280  Q
    |||||||||  |||||||||||||  |||||||||||||| ||   ||||||||  |||||||||||| ||||||    
T  41027986 gatacgtattgggagagtatccgacaattaaattttattttttaaaaaaacaattgtccgatactttttagatac 41027912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 2364684 - 2364729
Alignment:
Q  146 cagatacttcaaaatggataacgtactgtatcccatgcgtaacctg 191  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||    
T  2364684 cagatacttcaaaatggataacgtaccatatcccctgcgtatcctg 2364729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 442
Target Start/End: Complemental strand, 2604728 - 2604643
Alignment:
Q  357 atatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaat 442  Q
    |||||| ||||||||||||| |||| |   | ||| | |||||||||||| |||||||||| |||||| | ||||||||| |||||    
T  2604728 atatgtgattgactaagtaacgatattcatttttttgtatatatcatataagtaattgactgattgtcacattctttattgtcaat 2604643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 10763736 - 10763772
Alignment:
Q  205 tgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  10763736 tgatacgtatcagaagagtatccgaagattaattttt 10763772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 33039622 - 33039674
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||| |||||||||||| || |||||||| |||||| |||| ||||||||    
T  33039622 gatactttaaaatggataacatattgtatcccttgcgtatcctgcaccgatac 33039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 43189664 - 43189716
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| | |||| ||||||| |||||| |||| ||||||||    
T  43189664 gatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatac 43189716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 197 - 480
Target Start/End: Original strand, 21637734 - 21638018
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgag 296  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||| |||||||||||||||||||||||||  |||||    
T  21637734 atacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaaacaattatctgatacttttcagatacatctgggat--acgag 21637831  T
Q  297 ggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttag--tacatatgtaattgactaagtaatgatactttctatttagg 394  Q
    ||||| || ||||||||||||||||| || ||||||||||||||||||||||||| |  || |||| |||||||||||||||||||  ||||||||||||    
T  21637832 ggataggcggtggaaaaccgatatgtgcgtgctacctgatgtttctattatatttggtatatatatataattgactaagtaatgatgttttctatttagg 21637931  T
Q  395 atatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||    
T  21637932 atatatcatgtatgtaattgactaattgttgttttctttattatcaatattacttacattaatattaatattgttgccgccgtctgt 21638018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 196 - 478
Target Start/End: Original strand, 4400536 - 4400817
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||| |    |||| ||| |||||||| ||||||||||||||||||||||  ||    
T  4400536 gatacttcccgatacgtatcaggagagtatcagaatattaaattttatttttaaaaaaaataattatccgataattttcagatacatctgggatac--ga 4400633  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagga 395  Q
    |||||| || ||||||||   |||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  4400634 gggataggcggtggaaaatatatatgtgcgggctatctgatgtttctattatatttgatacatatgtaattgactaagtaatgatgctttctatttagga 4400733  T
Q  396 tatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtct 478  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  4400734 tatatcatatatgtaattgactaattgtcactttatttattatcaatattacttacatttatatttctattgttgtcgccgtct 4400817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 197 - 480
Target Start/End: Original strand, 49069249 - 49069555
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgag 296  Q
    |||||| |||||| |||| |||||||||| ||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||   |||    
T  49069249 atactttctgatatgtattaggagagtattcgaagattaaattttatttttttaaaaaacaattatccgatacttttcagatacatctgggataatagag 49069348  T
Q  297 ggataagcagtggaaaaccgatatgtacgggctacctgatg----------------------tttctattatatttagtacatatgtaattgactaagt 374  Q
      ||| || ||||||||||||||||| ||||||||||||||                      |||||||||||||| ||| |||||||||| |||||||    
T  49069349 atataggcggtggaaaaccgatatgtgcgggctacctgatgtttctattatatctggtatatgtttctattatatttggtatatatgtaattaactaagt 49069448  T
Q  375 aatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgt 473  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49069449 aatgatgttttctatttaggatatatcatatatgtaattgactaattgtggctttctttattatcaatattacttacatttatatttatattgttgtcgt 49069548  T
Q  474 cgtctgt 480  Q
    |||||||    
T  49069549 cgtctgt 49069555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 206 - 469
Target Start/End: Original strand, 27981974 - 27982234
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagca 305  Q
    ||||||||||| ||||||||  ||||||| || ||||||| |||| |||||||  ||  ||||||||||||||||||||| |||||  ||| ||||  |     
T  27981974 gatacgtatcaagagagtatttgaagattgaaatttattt-ttttaaaaacaaatatatgatacttttcagatacatctgtgatac--gagcgatagacg 27982070  T
Q  306 gtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatat 405  Q
     ||||||| |||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  27982071 atggaaaatcgatatgtgcgggctacctgatgtttctat-atattttgtatatatgtaattgactaagtaatgatgttttctatttatgatatatcatat 27982169  T
Q  406 atgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttg 469  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||    
T  27982170 atgtaattgactaattatcgctttctttattatcaatattacttacatttatatttctactgttg 27982234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 357 - 472
Target Start/End: Original strand, 5409455 - 5409571
Alignment:
Q  357 atatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacattta 455  Q
    ||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5409455 atatgcaattgactaagtaatgatgttttctattaaggatatatcatatatgtaattgactaattgtcgctttctttattagcaatattacttacattta 5409554  T
Q  456 tatttatattgttgtcg 472  Q
    ||||| |||||||||||    
T  5409555 tatttctattgttgtcg 5409571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 11891821 - 11891943
Alignment:
Q  247 tttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctatta 346  Q
    |||| |||||||| |||||||||||||||||||||||||||||||  ||| ||||||  ||||||||| ||||||| |||||||||||||||||||||||    
T  11891821 ttttaaaaacaattatccgatacttttcagatacatctgggatac--gagcgataagg-gtggaaaactgatatgtgcgggctacctgatgtttctatta 11891917  T
Q  347 tatttagtacatatgtaattgactaa 372  Q
    ||||| ||| ||||||||||||||||    
T  11891918 tatttggtatatatgtaattgactaa 11891943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 11892567 - 11892689
Alignment:
Q  247 tttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctatta 346  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||  ||| ||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  11892567 ttttaaaaacaattatctgatacttttcagatacatctgggatac--gagcgataagg-gtggaaaaccgatatgtgcgggctacctgatgtttctatta 11892663  T
Q  347 tatttagtacatatgtaattgactaa 372  Q
    ||||| ||| ||||||||||||||||    
T  11892664 tatttggtatatatgtaattgactaa 11892689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 327 - 480
Target Start/End: Complemental strand, 44121838 - 44121679
Alignment:
Q  327 gctacctgatgtttctattatatttagtacatatgta----attgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaa-tt 421  Q
    |||||||||||||||||||||||||  || |||| ||    |||||||| ||||||||  |||||||||| ||||||| |||||||||||||||||| ||    
T  44121838 gctacctgatgtttctattatatttgatatatatatatataattgactaggtaatgatgttttctatttaagatatattatatatgtaattgactaattt 44121739  T
Q  422 gtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||| ||||||| |||||||    
T  44121738 gtcgctttctttattatcaatattacttacatttatgtttctatcgttgtcgccgtctgt 44121679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 334 - 460
Target Start/End: Complemental strand, 22493018 - 22492891
Alignment:
Q  334 gatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttcttt 433  Q
    |||||||||||||| ||| | | |||||| |||||||||||||||||  | ||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  22493018 gatgtttctattatttttgggatatatgtgattgactaagtaatgatgttctctttttgggatatatcatatatgtaattgactaattgtcactttcttt 22492919  T
Q  434 attatcaata-tacttacatttatattt 460  Q
    |||||||||| |||||| ||||||||||    
T  22492918 attatcaatattacttatatttatattt 22492891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 196 - 340
Target Start/End: Original strand, 21058901 - 21059046
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaatt--ttatttatttttaaaacaatcatccgatactttt-cagatacatctgggataca 292  Q
    |||| |||| |||||||||| ||||||||||| |||||||||||  |||||| |||| |||||||| ||||||||||||| ||||||||| |||||||||    
T  21058901 gatatttcccgatacgtatctggagagtatccaaagattaaattatttattttttttaaaaacaattatccgatactttttcagatacatatgggataca 21059000  T
Q  293 cgagggataagcagtggaaaaccgatatgtacgggctacctgatgttt 340  Q
      || ||||  | ||||||||||||||||| |||||||||||||||||    
T  21059001 --agcgatatacggtggaaaaccgatatgtgcgggctacctgatgttt 21059046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 38492368 - 38492246
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| ||||||| || || |||||||||| ||||||||||| || ||||||||||||||     
T  38492368 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaattttatttt 38492269  T
Q  247 tttttaaaacaatcatccgatac 269  Q
    |||  |||| ||| |||||||||    
T  38492268 tttaaaaaataattatccgatac 38492246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 402 - 480
Target Start/End: Original strand, 11891926 - 11892005
Alignment:
Q  402 atatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| || |||||||    
T  11891926 atatatgtaattgactaattgtcactttctttattatcaatattacttacatttatatttctattgttgccgccgtctgt 11892005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 24016696 - 24016609
Alignment:
Q  357 atatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaatata 445  Q
    |||||||||||| |||||||| ||  | ||| |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  24016696 atatgtaattgaataagtaataatgttctctttttaggatatatcatata-gtaattgactaattgtcactttctatattatcaatata 24016609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 40694138 - 40694213
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||| ||| |||||||    
T  40694138 gatacttcccgatacgtatcaggagagtatctgaagattaaattttatttttttataaaataattatctgatactt 40694213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 3403683 - 3403586
Alignment:
Q  149 atacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||| |||||| ||||||| || ||| |||| || |||| ||||| |||||||||| ||||||||||| || ||||||||||||||    
T  3403683 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgatatcttcccgatacgtatccggagagtatccaaatattaaattttattt 3403586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 11892672 - 11892740
Alignment:
Q  402 atatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttg 469  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||| ||||    
T  11892672 atatatgtaattgactaattgtcactttccttattatcaatattacttacatttatatttctatcgttg 11892740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 468
Target Start/End: Original strand, 21059103 - 21059170
Alignment:
Q  402 atatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgtt 468  Q
    |||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||    
T  21059103 atatatataattgactaattgttgctttctttattatcaacattacttacatttatatttctattgtt 21059170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 19738763 - 19738841
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  19738763 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 19738841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 39957630 - 39957708
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||  |||||||||| |||||||||||||| |||||||||||||| |||  |||| ||| ||||||||||||    
T  39957630 ccgatacttctcgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatacttt 39957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 48006198 - 48006260
Alignment:
Q  329 tacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctattt 391  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||  |||||||||    
T  48006198 tacctgatgtttctattatatttggtatatatgtaattgactaaataatgatgttttctattt 48006260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 52122978 - 52122843
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-----------ttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| ||||||||           |||| |||||||||| ||||||||||| || |||||    
T  52122978 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaa 52122879  T
Q  237 attttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| |||  |||| ||| ||| ||||||||    
T  52122878 attttatttttttaaaaaataattatctgatacttt 52122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 53322404 - 53322481
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  53322404 cgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 53322481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 36943708 - 36943812
Alignment:
Q  168 gtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccga 266  Q
    |||| ||||||| || ||| |||| |||||||| | || |||||||||||| ||||||||||||||||||| ||||||| |||| |||| ||| ||| ||    
T  36943708 gtaccgtatcccctgtgtatcctgcaccgatacctacccgatacgtatcagaagagtatccgaagattaaaatttattttttttaaaaataattatctga 36943807  T
Q  267 tactt 271  Q
    |||||    
T  36943808 tactt 36943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 52721332 - 52721408
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| |||||||||  ||||||||||| || |||||||||||||| ||| ||||| ||| ||||||||||||    
T  52721332 gatacttcccgatacgtattcggagagtatccaaatattaaattttatttttttataaaataattatccgatacttt 52721408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 17892314 - 17892365
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  17892314 ccgatacttcccgatatgtatcagaagagtatccgaagattaaattttattt 17892365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 36511986 - 36511935
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  36511986 ccgatactttccgatacgtatcagaagagtatccgaagattaaattttattt 36511935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 3691505 - 3691388
Alignment:
Q  204 ctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataag 303  Q
    |||||| ||||| | ||||||| || |||||||||||||||||     ||||||||  |  ||||||||||||||||||| ||||||| |||||||||      
T  3691505 ctgatatgtatcggaagagtattcggagattaaattttatttaaaaa-aaaacaattgtatgatacttttcagatacatcagggatacgcgagggataga 3691407  T
Q  304 cagtggaaaaccgatatgt 322  Q
    | |||||||||||||||||    
T  3691406 ctgtggaaaaccgatatgt 3691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 47607177 - 47607227
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  47607177 gatatttcctgatacgtatcaggagagcatctgaagattaaattttattta 47607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 46431983 - 46431934
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  46431983 gatacttcccgatacgtatcaagagagtatccaaagattaaattttattt 46431934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 347
Target Start/End: Complemental strand, 36561755 - 36561662
Alignment:
Q  252 aaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattat 347  Q
    |||| ||| ||| ||||||||||| |||||| || |||||  ||| |||| |  ||||||||||||||||| ||||||| ||||||||||||||||    
T  36561755 aaaagaattatctgatacttttcaaatacatatgtgatac--gagcgataggtggtggaaaaccgatatgtgcgggctagctgatgtttctattat 36561662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 5325773 - 5325722
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  5325773 ccgatacttcccgatacgtatctggagagtatccaaatattaaattttattt 5325722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 24793771 - 24793732
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  24793771 gatacgtatcagaagagtatccgaagattaaattttattt 24793732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 31946266 - 31946227
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31946266 gatacgtatcagaagagtatccgaagattaaattttattt 31946227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 42630525 - 42630486
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  42630525 gatacgtatcaggagaatatccgaagattaaattttattt 42630486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 55901191 - 55901140
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||  |||||||||||||| | |||||||||||||||||||||||    
T  55901191 ccgatacttctcgatacgtatcaggaaaatatccgaagattaaattttattt 55901140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 5834839 - 5834947
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-----------cttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||           ||||| |||||||||| ||||||||||| || |||||    
T  5834839 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagtatccaaatattaa 5834938  T
Q  237 attttattt 245  Q
    |||||||||    
T  5834939 attttattt 5834947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 8064161 - 8064083
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  8064161 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 8064083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 42472678 - 42472624
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt 202  Q
    ||||||||||||||||| ||||||||||| || |||||| |||| ||||||||||    
T  42472678 gatacttcaaaatggatgacgtactgtattccctgcgtatcctgcaccgatactt 42472624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 37992583 - 37992534
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||| | |||||||||||| ||||||||| |||||||||||||||||    
T  37992583 gatactttccgatacgtatcagaagagtatccaaagattaaattttattt 37992534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 726536 - 726504
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccga 229  Q
    |||||||||||||||||||||||||||||||||    
T  726536 atacttcctgatacgtatcaggagagtatccga 726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 754308 - 754340
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccga 229  Q
    |||||||||||||||||||||||||||||||||    
T  754308 atacttcctgatacgtatcaggagagtatccga 754340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 14795032 - 14795084
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  14795032 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 14795084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 41145621 - 41145673
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| | ||||||    
T  41145621 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatac 41145673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 430
Target Start/End: Complemental strand, 3691321 - 3691286
Alignment:
Q  395 atatatcatatatgtaattgactaattgtcgctttc 430  Q
    |||||||||||||||||||||||||||||| |||||    
T  3691321 atatatcatatatgtaattgactaattgtcactttc 3691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 31946209 - 31946174
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31946209 ccgatacttcccgatacgtatcaggagagtatccga 31946174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 36511916 - 36511881
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    |||||||||||||||||||||||||| |||||||||    
T  36511916 ccgatacttcctgatacgtatcaggaaagtatccga 36511881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 42472621 - 42472570
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||  ||||||||| ||||||||||| || ||||||||||||||    
T  42472621 ccgatacttcccaatacgtatccggagagtatccaaatattaaattttattt 42472570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 42630467 - 42630432
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42630467 ccgatacttcctgatacgtatcaggtgagtatccga 42630432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 51858930 - 51858965
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  51858930 ccgatacttcccgatacgtatcaggagagtatccga 51858965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 4119548 - 4119506
Alignment:
Q  203 cctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||| |||||||||||||  ||||||||||||||    
T  4119548 cctgatacgtatcgggagagtatccgacaattaaattttattt 4119506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 36943806 - 36943836
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatc 226  Q
    |||||||||||||||||||||||||||||||    
T  36943806 gatacttcctgatacgtatcaggagagtatc 36943836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 2586402 - 2586479
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |  ||||||||||| ||||||||||||||||||| ||| ||| |||  |||| ||| |||| ||||||    
T  2586402 ccgatactttccaatacgtatcagaagagtatccgaagattaaaatttgtttttttaaaaaataattatcctatactt 2586479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 51858900 - 51858933
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  51858900 gatacttcccgatacgtatcaggagagtatccga 51858933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 19738697 - 19738749
Alignment:
Q  139 ggaagcgcagatacttcaaaatggataacgtactgtatcccatgcgtaacctg 191  Q
    |||||| | ||||||||||||||||| |||||| ||||||| |||||| ||||    
T  19738697 ggaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctg 19738749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 5e-85; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 148 - 467
Target Start/End: Original strand, 12357898 - 12358217
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| ||||||  || ||| |||| ||||||| ||||| |||||||||||| | ||||||| || ||||||||||||||     
T  12357898 gatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaattttatttt 12357996  T
Q  247 tttttaaaa-caatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctatt 345  Q
    |||  |||| |||| |||||||||||||||||||||||||||||||  |||||||| || ||||||||||||| ||| | ||||| ||||||||||||||    
T  12357997 tttaaaaaaacaattatccgatacttttcagatacatctgggatac--gagggataggcggtggaaaaccgatctgtgcaggctagctgatgtttctatt 12358094  T
Q  346 atatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-t 444  Q
    |||||| ||| |||||||||||||| ||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  12358095 atatttggtatatatgtaattgacttagtaacgatgttttctatttagaatatatcatatatgtaattgactaattgtcgctttctttattatcaacatt 12358194  T
Q  445 acttacatttatatttatattgt 467  Q
    |||||||||||||||| ||||||    
T  12358195 acttacatttatatttctattgt 12358217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 148 - 467
Target Start/End: Original strand, 12359026 - 12359345
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| ||||||  || ||| |||| ||||||| ||||| |||||||||||| | ||||||| || ||||||||||||||     
T  12359026 gatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaattttatttt 12359124  T
Q  247 tttttaaaa-caatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctatt 345  Q
    |||  |||| |||| |||||||||||||||||||||||||||||||  |||||||| || ||||||||||||| ||| | ||||| ||||||||||||||    
T  12359125 tttaaaaaaacaattatccgatacttttcagatacatctgggatac--gagggataggcggtggaaaaccgatctgtgcaggctagctgatgtttctatt 12359222  T
Q  346 atatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-t 444  Q
    |||||| ||| |||||||||||||| ||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  12359223 atatttggtatatatgtaattgacttagtaacgatgttttctatttagaatatatcatatatgtaattgactaattgtcgctttctttattatcaacatt 12359322  T
Q  445 acttacatttatatttatattgt 467  Q
    |||||||||||||||| ||||||    
T  12359323 acttacatttatatttctattgt 12359345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 195 - 480
Target Start/End: Complemental strand, 30804796 - 30804517
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacg 294  Q
    |||||||| | ||||||||||||||||||||||||| ||||| |||| |  |     |||| ||| ||| ||||||||||||||||||||| |||||  |    
T  30804796 cgatactttccgatacgtatcaggagagtatccgaatattaatttttttaaa-----aaaataattatctgatacttttcagatacatctgagatacgag 30804702  T
Q  295 agggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagg 394  Q
    |||  || ||||||||||||| | |||| |||||||||||||| ||||| | ||||| ||| |||| ||||||||||||||| |||   |||| ||||||    
T  30804701 agg--taggcagtggaaaaccaaaatgtgcgggctacctgatgattctactgtatttggtatatatttaattgactaagtaacgatgtattctttttagg 30804604  T
Q  395 atatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  30804603 atatatcatatatgtaattgactaattgtcgctttctttattatcaatattacttacatttatatttctattgttgtcgccgtctgt 30804517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 196 - 409
Target Start/End: Original strand, 10349312 - 10349523
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||||||  |||||||||||||| |||||| |||||||||||||||||| |||  |||||||| |||| |||||||||| | |||||||||||||  ||    
T  10349312 gatacttctcgatacgtatcaggaaagtatctgaagattaaattttatttttttaaaaaacaattatccaatacttttcaaaaacatctgggatac--ga 10349409  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagga 395  Q
    || ||| || |||||||| |||| ||| |||||| ||||||||||||||||||||| ||| |||| ||||||||||| ||||||| |||| |||||||||    
T  10349410 ggaataggcggtggaaaatcgatctgtgcgggctgcctgatgtttctattatatttggtatatatataattgactaaataatgatgctttttatttagga 10349509  T
Q  396 tatatcatatatgt 409  Q
    ||||||||||||||    
T  10349510 tatatcatatatgt 10349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 201 - 480
Target Start/End: Original strand, 23265722 - 23265983
Alignment:
Q  201 ttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggat 300  Q
    |||| ||||||||||||||||||||||||||||||| ||||     ||||| ||||||| |||||||||||| ||||||    || |||||  |  ||||    
T  23265722 ttcccgatacgtatcaggagagtatccgaagattaattttt-----ttttttaaacaattatccgatactttacagata----tgagatac--gttggat 23265810  T
Q  301 aagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatat 400  Q
    | || ||||||||||||||||| || | ||||||||||||||||||||||| |||        |||||||||||||| ||  |||||||||| |||||||    
T  23265811 aggcggtggaaaaccgatatgtgcgagttacctgatgtttctattatatttggta--------attgactaagtaataatgttttctatttatgatatat 23265902  T
Q  401 catatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    |||||||||| ||||||||||||||||||||||||| |||||| || ||| |||| ||||| ||||||||||| |||||||    
T  23265903 catatatgtagttgactaattgtcgctttctttattgtcaatattaattatatttgtatttctattgttgtcgccgtctgt 23265983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 206 - 444
Target Start/End: Original strand, 17702573 - 17702811
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagca 305  Q
    |||||||||| |||||||||| ||| |||||||||||||| || | |||| |||  | |||||||||||||||||||| ||||||  || | ||||  ||    
T  17702573 gatacgtatcgggagagtatctgaaaattaaattttattttttataaaaataattgttcgatacttttcagatacatcggggataggcgggagatagaca 17702672  T
Q  306 gtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatat 405  Q
    || ||||| ||||| || |    ||| |||||||||||||||  || | | ||||||||||||||| |||||  |  | ||| ||| |||||||||||||    
T  17702673 gtagaaaatcgatacgttcattatacatgatgtttctattattgttgggatatatgtaattgactaggtaatagtgttatcttttttggatatatcatat 17702772  T
Q  406 atgtaattgactaattgtcgctttctttattatcaatat 444  Q
    |||||||||||||| ||||  ||||||||||||||||||    
T  17702773 atgtaattgactaaatgtcattttctttattatcaatat 17702811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 471
Target Start/End: Original strand, 34139710 - 34139977
Alignment:
Q  204 ctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaa-caatcatccgatacttttcagatacatctgggatacacgagggataa 302  Q
    ||||||| |||| ||||||||||||  ||||||||||||||| |||  |||| ||||  |  ||||||||||||||||||| |||||||  | | |||      
T  34139710 ctgatacatatcgggagagtatccggcgattaaattttatttttttaaaaaaacaattgtttgatacttttcagatacatcggggatacgtgggcgattg 34139809  T
Q  303 gcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatca 402  Q
     | |||||||| ||||| || |||  ||| ||||||||||||||| || || | ||||||||||||||  |||||| |  ||||| ||| ||||||||||    
T  34139810 acggtggaaaatcgatacgtgcgga-tacatgatgtttctattattttgag-atatatgtaattgactcggtaatggtgttttctttttgggatatatca 34139907  T
Q  403 tatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtc 471  Q
     |||||||||||| | |||||| |||| ||||||||||||| |||||| |||||||||| | ||||||||    
T  34139908 catatgtaattgaatgattgtcactttatttattatcaatattacttatatttatatttttgttgttgtc 34139977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 32638965 - 32638867
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||| || || |||||||||| ||||||||||| || ||||||||||||||    
T  32638965 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaattttattt 32638867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 26513973 - 26514041
Alignment:
Q  402 atatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttg 469  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  26513973 atatatgtaagtgattaattgtcgctttctttattatcaatattacttacatttatatttctattgttg 26514041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 37372327 - 37372377
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37372327 gatacttcccgatacgtatcaggagagtatccgaagattaaattttattta 37372377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 5539444 - 5539542
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| | |||||||||||| |||||| |||| |||||||| | || |||| ||||| ||||||||||| || |||||||||||||||    
T  5539444 gatacttcaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgatacctgcccgatatgtatccggagagtatccaaatattaaattttattta 5539542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 32759439 - 32759517
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  32759439 ccgatacttcccgatacgtatctggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 32759517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 27886258 - 27886307
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  27886258 gatacttcccgatacgtatcaggagagtatccgaagattaaagtttattt 27886307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 27944916 - 27944965
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  27944916 gatacttcccgatacgtatcaggagagtatccgaagattaaagtttattt 27944965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 38388733 - 38388810
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||||  ||||||| |||||| ||||||||||||||||||||||||| |||  |||||||| |||| ||||||    
T  38388733 ccgatacttctcgatacgtgtcaggaaagtatccgaagattaaattttatttttttaaaaaacaattatccaatactt 38388810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 25022191 - 25022242
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  25022191 ccgatacttcctgatacgtatcgggagagtatccaaatattaaattttattt 25022242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 43771756 - 43771705
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  43771756 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttattt 43771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 22201389 - 22201311
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  22201389 ccgatactttccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 22201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 29355691 - 29355737
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaatttta 242  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  29355691 gatacttcccgatacgtagcaggagagtatccgaagattaaatttta 29355737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 32424930 - 32425038
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-----------ttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||           |||  |||||||||||| ||||||||||||||||||    
T  32424930 gatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgtctgatacttcacgatacgtatcagaagagtatccgaagattaa 32425029  T
Q  237 attttattt 245  Q
    |||||||||    
T  32425030 attttattt 32425038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 28876675 - 28876623
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| ||||||||    
T  28876675 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatac 28876623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 32877503 - 32877554
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  32877503 ccgatacttcccgatacgtatcgggagagtatccaaatattaaattttattt 32877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 10349523 - 10349577
Alignment:
Q  427 tttctttattatcaatat-acttacatttatatttatattgttgtcgtcgtctgt 480  Q
    |||||||||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  10349523 tttctttattatcaatattacttacatttatatttctattgtttccgtcgtctgt 10349577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 16384683 - 16384761
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| | ||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  16384683 ccgatacttcccgatacgtatccgaagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 16384761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 34901434 - 34901356
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  34901434 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 34901356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 5818361 - 5818312
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  5818361 gatatttcccgatatgtatcaggagagtatctgaagattaaattttattt 5818312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 12580603 - 12580554
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  12580603 gatacttcccgatacgtatccggagagtatccaaatattaaattttattt 12580554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 2873019 - 2872967
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  2873019 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 2872967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 19436283 - 19436335
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  19436283 gatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 19436335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 19572432 - 19572484
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  19572432 gatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 19572484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 24100233 - 24100197
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaatttta 242  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24100233 gatatgtatcaggagagtatccgaagattaaatttta 24100197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 27968171 - 27968222
Alignment:
Q  196 gatacttcctgatacgtatcaggaga--gtatccgaagattaaattttattt 245  Q
    ||||||||| ||||||||||||||||  |||||||||||||||| |||||||    
T  27968171 gatacttcccgatacgtatcaggagatcgtatccgaagattaaagtttattt 27968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 28025157 - 28025208
Alignment:
Q  196 gatacttcctgatacgtatcaggaga--gtatccgaagattaaattttattt 245  Q
    ||||||||| ||||||||||||||||  |||||||||||||||| |||||||    
T  28025157 gatacttcccgatacgtatcaggagatcgtatccgaagattaaagtttattt 28025208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 36483444 - 36483496
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  36483444 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 36483496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 2872962 - 2872911
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || || |||||||||||    
T  2872962 ccgatacttcccgatacgtatccggagagtatccaaatatgaaattttattt 2872911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 4246006 - 4246057
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| | ||||||||| || ||||||||||||||    
T  4246006 ccgatacttcccgatacgtatccgaagagtatccaaatattaaattttattt 4246057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 6028496 - 6028547
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata 199  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||    
T  6028496 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 6028547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 13422276 - 13422325
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||  ||||||||||| || ||||||||||||||    
T  13422276 gatacttcccgatacgtatacggagagtatccaaatattaaattttattt 13422325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 13422217 - 13422269
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| ||| || |||| ||||||||    
T  13422217 gatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatac 13422269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 20182451 - 20182487
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaatttta 242  Q
    |||||||||||| |||||||| |||||||||||||||    
T  20182451 gatacgtatcagtagagtatctgaagattaaatttta 20182487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 200 - 469
Target Start/End: Original strand, 15880510 - 15880775
Alignment:
Q  200 cttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgaggga 299  Q
    |||||||||||||||||||||||||||||||||||   ||| |||| |||   |||  || |||| ||||||||||||||||||||||||||  ||||||    
T  15880510 cttcctgatacgtatcaggagagtatccgaagattttttttaattttttt---aaatgattatccaatacttttcagatacatctgggatac--gaggga 15880604  T
Q  300 taagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatata 399  Q
    || || ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  | |||| ||||||||||    
T  15880605 tatgcggtggaaaaccgatatatacgggctacctgatgtttctattatatttggtatatatgtaattgactaagtaatgatgttctctacttaggatata 15880704  T
Q  400 tcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttg 469  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  15880705 tcatatatgtaattgattagttgtcgctttctttattatcaatattacttacatttatatttctattgttg 15880775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 196 - 480
Target Start/End: Complemental strand, 37134348 - 37134063
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaa---caatcatccgatacttttcagatacatctgggataca 292  Q
    ||||||||| ||||||||||| ||||||||  |||||||||||||||||||     ||||   |||| |||||||||||||||||||||||||||||||     
T  37134348 gatacttcccgatacgtatcaagagagtatatgaagattaaattttatttaaaaaaaaaaaaacaattatccgatacttttcagatacatctgggatac- 37134250  T
Q  293 cgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctattta 392  Q
     |||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||  ||||||||||    
T  37134249 -gagggataggcagtggaaaactgatatgtatgggctac-tgatgtttctattatatttggtatatatgcaattgactaagtaatgatgttttctattta 37134152  T
Q  393 ggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
     | ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| || |||||||    
T  37134151 tgttatattatatatgtaattgactaattgtcgctttctttattatcaacattacttacatttatatttttattgttgccgccgtctgt 37134063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 265 - 480
Target Start/End: Original strand, 13289603 - 13289817
Alignment:
Q  265 gatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaa 364  Q
    |||||||||||||||||||||||||||  ||| |||| ||||| |||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||    
T  13289603 gatacttttcagatacatctgggatac--gagcgataggcagtagaaaaccgatatgtgcgggctacctaatgtttctattatatttggtatatatgtaa 13289700  T
Q  365 ttgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttata 463  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  13289701 ttgattaagtaatgatgttttctatttaggatatatcatatatgtaatttactaattgtcgctttctttattatcaatattacttacatttatatttcta 13289800  T
Q  464 ttgttgtcgtcgtctgt 480  Q
    ||||||||| |||||||    
T  13289801 ttgttgtcgccgtctgt 13289817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 196 - 480
Target Start/End: Original strand, 25933633 - 25933907
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||||||  |||||  |||||||||||||||||||||||||||| ||||   ||| ||| ||| ||    ||  ||||||||| ||||||||||   ||    
T  25933633 gatacttctcgatacagatcaggagagtatccgaagattaaatttaattt---tttgaaaaaataat----ta--tttcagatatatctgggatat--ga 25933721  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttagga 395  Q
    |||||| |  |||||||| |||||||| ||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||    
T  25933722 gggataggtggtggaaaatcgatatgtgcgggctagccgatgtttctattatatttagtatatatgtaatcgactaagtaatgatgttttctatttagga 25933821  T
Q  396 tatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||    
T  25933822 tatatcatatatgtaattgactaattgtcgctttctttattaacaatattacttacatttatatttctattgttgtcgccgtctgt 25933907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 193 - 469
Target Start/End: Original strand, 43214637 - 43214907
Alignment:
Q  193 accgatacttcctgatacgtat--caggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggata 290  Q
    |||||||||||| ||||| |||  ||||||||||||||||||||||      |||||||  |||||||| || | ||||||||||||||||| |||||||    
T  43214637 accgatacttcccgatacatatatcaggagagtatccgaagattaa------tttattt--aaaacaattattcaatacttttcagatacatttgggata 43214728  T
Q  291 cacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaa-gtaatgatactttctat 389  Q
    |  ||| |||| || ||||||||| ||||||| || |||| |||||||||||||||||||| ||| || ||||||||||||| ||||||||  |||||||    
T  43214729 c--gagagataggcggtggaaaactgatatgtgcgcgctatctgatgtttctattatatttggtatatctgtaattgactaaagtaatgatgatttctat 43214826  T
Q  390 ttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttg 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  43214827 ttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaatattacttacatttctatttctattgttg 43214907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 392
Target Start/End: Complemental strand, 40497435 - 40497245
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||    |||||||||| |||||||||||||||||||||| ||||||||  ||    
T  40497435 gatacttcccgatacgtatcaggagagtatccaaagattaaattttattt----ttaaaacaattatccgatacttttcagatacatttgggatac--ga 40497342  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctattta 392  Q
    || ||| |||||||||||| ||||||| ||| ||||| |||||||||||||||||| ||| |||||||||||||||| |||||||  ||||||||||    
T  40497341 ggaataggcagtggaaaactgatatgtgcggactaccagatgtttctattatatttggtatatatgtaattgactaaataatgatgttttctattta 40497245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 3563860 - 3563983
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||||||||||||| ||||| |||||||| | | ||  ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  3563860 gatacttcaaaatggatgacgtattgtatcccctacatattctgcactgatacttcccgatacgtatcaggagagtatccgaagattaaattttatttct 3563959  T
Q  248 ttttaaaacaatcatccgatactt 271  Q
    ||  |||| ||| ||| |||||||    
T  3563960 ttaaaaaataattatctgatactt 3563983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 40536243 - 40536376
Alignment:
Q  140 gaagcgcagatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaat 238  Q
    ||||| || |||||||||||||| |||||||||||||| |||||||| |||| ||||||| || || |||||||||| | |||||||| ||  |||||||    
T  40536243 gaagcccaaatacttcaaaatgggtaacgtactgtatcacatgcgtatcctgcaccgatacctacccgatacgtatcggaagagtatcagatcattaaat 40536342  T
Q  239 ttta-tttatttttaaaacaatcatccgatactt 271  Q
    |||| ||||||||| ||| ||| |||||||||||    
T  40536343 tttattttattttttaaataattatccgatactt 40536376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 2319343 - 2319416
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||| ||| |||||||||    
T  2319343 gatacttcctgatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataattatccgatac 2319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 44156665 - 44156741
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttt-taaaacaatcatccgatactt 271  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  |||| ||| |||||||||||    
T  44156665 gatacttcccgatacgtatcaggagagtatccgaagattaaattttattttttttaaaaaataattatccgatactt 44156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 1005579 - 1005655
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||||| ||||||||| || |||||||| |||||||||||||||||||||||| ||| ||| ||| |||||||    
T  1005579 cgatacttcccgatacgtattagaagagtatctgaagattaaattttatttattttttaaataattatctgatactt 1005655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 31236295 - 31236161
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtacc-----------gatacttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||| ||||||||||||||| |||||||| |||||| |||| |||           |||| |||| |||||||||||||||||||||||||||||||    
T  31236295 gatactttaaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggagagtatccgaagattaa 31236196  T
Q  237 attttatttatttttaaaacaatcatccgatactt 271  Q
    |||||| || |||  |||| ||||| |||||||||    
T  31236195 attttaattttttaaaaaataatcagccgatactt 31236161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 8482967 - 8482892
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||| |||  |||| ||| |||||||||||    
T  8482967 gatactttccgatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 8482892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 6124239 - 6124317
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  6124239 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 6124317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 14824157 - 14824255
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||| ||| |||||  ||||| | |||||| | || ||||||| ||  |||||||||||||| |||||||||||||||||||||||||||    
T  14824157 gatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctgtctgatacgtatcagaagagtatccgaagattaaattttattt 14824255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 20536784 - 20536882
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| |||||  ||||||| ||| || |||| |||||||||| || |||||||||| | ||||||||| || ||||||||||||||    
T  20536784 gatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgatacttgcccgatacgtatcggaagagtatccaaatattaaattttattt 20536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 34146248 - 34146297
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  34146248 gatacttcccgatacgtatcaggagagtatccaaagattaaattttattt 34146297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 4561854 - 4561905
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  4561854 ccgatacttcccgatacatatcagaagagtatccgaagattaaattttattt 4561905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 22484333 - 22484408
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| |||||||||    
T  22484333 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatac 22484408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 33737807 - 33737740
Alignment:
Q  394 gatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatattt 460  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||  ||||||||||    
T  33737807 gatatatcatatatgtaattgactaattgttactttctttatcatcaatattacttgtatttatattt 33737740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 7876780 - 7876858
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  7876780 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 7876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 16561866 - 16561944
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| ||| ||||| |||  |||||| ||||    
T  16561866 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttataaaataattgtccgatgcttt 16561944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 35342326 - 35342434
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-----------ttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||           |||| |||||||||||  ||||||||||||||||||    
T  35342326 gatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatacttcccgatacgtatcaaaagagtatccgaagattaa 35342425  T
Q  237 attttattt 245  Q
    |||||||||    
T  35342426 attttattt 35342434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 1776476 - 1776411
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||||||| ||||||||||||||||||||||||||| ||   |||| |||||| ||||||||    
T  1776476 gatacgtatcagaagagtatccgaagattaaattttattttttaaaaaaaaaatcattcgatactt 1776411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 4355393 - 4355442
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  4355393 gatacttcccgatacgtatcaggagagtatgcaaagattaaattttattt 4355442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 35996721 - 35996785
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||||||||||||||| ||||||||||||||||||| |||  |||| ||| |||||||||||    
T  35996721 gatacgtatcaggagagtattcgaagattaaattttattt-tttaaaaaataattatccgatactt 35996785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 40308949 - 40308868
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttca 275  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |    |||| ||| |||||||||||||||    
T  40308949 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttaaaaaaaataattatccgatacttttca 40308868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 22571003 - 22571055
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    |||||||||||||||||||||| || |||||||| || |||||||||||||||    
T  22571003 ccgatacttcctgatacgtatccggggagtatccaaatattaaattttattta 22571055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 12206104 - 12206143
Alignment:
Q  207 atacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  12206104 atacgtatcaggagagtattcgaagattaaattttattta 12206143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 33324884 - 33324935
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  33324884 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 33324935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 34146315 - 34146350
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  34146315 ccgatacttcctgatacgtatcaggagagtatccga 34146350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 37354845 - 37354770
Alignment:
Q  396 tatatcatatatgtaattgactaattgtcgctttctttattatcaat-atacttacatttatatttatattgttgt 470  Q
    ||||||||| |||||| |||||||||||| ||||||||| ||||||| ||||| | ||||| |||||| |||||||    
T  37354845 tatatcatacatgtaactgactaattgtcactttctttaatatcaataatactaatatttacatttatgttgttgt 37354770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 38602374 - 38602323
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  38602374 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 38602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 4170611 - 4170503
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-----------ttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||           |||| |||||||||| ||||||||||| || |||||    
T  4170611 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagtatccaaatattaa 4170512  T
Q  237 attttattt 245  Q
    |||||||||    
T  4170511 attttattt 4170503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 6497758 - 6497650
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-----------cttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||           ||||| |||||||||| ||||||||||| || |||||    
T  6497758 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtatccaaatattaa 6497659  T
Q  237 attttattt 245  Q
    |||||||||    
T  6497658 attttattt 6497650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 45159407 - 45159309
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| |||||  ||||||| |||||| | || ||| ||| || || |||||||||| | ||||||| |||| ||||||||||||||    
T  45159407 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcaccaatatctgcccgatacgtatctgaagagtattcgaatattaaattttattt 45159309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 3545631 - 3545582
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||  |||| |||||||||||| ||||||||||||||||||||||    
T  3545631 gatacttctcgatatgtatcaggagagcatccgaagattaaattttattt 3545582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 7807425 - 7807348
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||| |||||||||| ||| ||||||| || |||||||||||||| |||  |||| ||  ||||||||||||    
T  7807425 cgatacttcccgatacgtatccggaaagtatccaaatattaaattttatttttttaaaaaataactatccgatacttt 7807348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 14217133 - 14217098
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14217133 ccgatacttcccgatacgtatcaggagagtatccga 14217098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 372
Target Start/End: Complemental strand, 33741969 - 33741862
Alignment:
Q  265 gatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaa 364  Q
    |||| ||||||||||||||  | |||| |||||||||  | |||||||| ||||| |  |||| ||| |||||||| |||||| ||| | | ||||||||    
T  33741969 gatatttttcagatacatcaagaatacgcgagggatagtcggtggaaaatcgatacgcgcgggatacatgatgtttttattatttttgggatatatgtaa 33741870  T
Q  365 ttgactaa 372  Q
    ||||||||    
T  33741869 ttgactaa 33741862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 40432046 - 40432003
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattt 240  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||    
T  40432046 atactttctgatacgtatcatgagagtatctgaagattaaattt 40432003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 33741879 - 33741837
Alignment:
Q  402 atatatgtaattgactaattgtcgctttctttattatcaatat 444  Q
    ||||||||||||||||||||||  ||||||||||||| |||||    
T  33741879 atatatgtaattgactaattgttactttctttattatgaatat 33741837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 4561926 - 4561959
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  4561926 gatacttcccgatacgtatcaggagagtatccga 4561959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 16219241 - 16219184
Alignment:
Q  402 atatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatat 458  Q
    |||||| ||||||| |||||||||  |||||||||||||||| |||||| ||||||||    
T  16219241 atatatttaattgattaattgtcgtcttctttattatcaatattacttatatttatat 16219184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 18301040 - 18301089
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||  |||||||||| ||||||||||| || ||||||||||||||    
T  18301040 gatacttctcgatacgtatcgggagagtatccaaatattaaattttattt 18301089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 24585597 - 24585642
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    ||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  24585597 gatacttccagatacgtatcaggagtgtatccaaagattaattttt 24585642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 35342455 - 35342488
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  35342455 gatacttcccgatacgtatcaggagagtatccga 35342488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 7807483 - 7807431
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||  ||||||| |||||| | |||||||||||    
T  7807483 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatac 7807431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 21104550 - 21104622
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgata 268  Q
    |||| |||| |||||||||||   |||||||||||||||||||| || || |||| |||| ||| ||||||||    
T  21104550 gatatttcccgatacgtatcaaaggagtatccgaagattaaattatactttttttaaaaataattatccgata 21104622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 31236169 - 31236137
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatc 226  Q
    ||||||||||| |||||||||||||||||||||    
T  31236169 ccgatacttcccgatacgtatcaggagagtatc 31236137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 7e-78; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 200 - 480
Target Start/End: Complemental strand, 53165555 - 53165275
Alignment:
Q  200 cttcctgatacgtatcaggagagtatccgaagattaaattttattt-atttttaaaacaatcatccgatacttttcagatacatctgggatacacgaggg 298  Q
    ||||| |||||||||||| |||| |||||||||||| ||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||  ||| |    
T  53165555 cttcccgatacgtatcagaagagcatccgaagattatattttattttatttttaaaacaattatccaatatttttcagatacatctgggatac--gagcg 53165458  T
Q  299 ataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatat 398  Q
    ||| || |||||||||| ||||| ||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||  ||| |||||| |||||    
T  53165457 ataggcggtggaaaaccaatatgaacgagctatctgatgtttctattatatttggtatatatgtaattgactaagtaatgatgttttttatttatgatat 53165358  T
Q  399 atcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||| ||||||||||||| ||| ||||||||||| |||||||    
T  53165357 atcatatatgtaattgattaattgacactttatttattatcaatattacttacatttatgtttttattgttgtcgccgtctgt 53165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 149 - 434
Target Start/End: Original strand, 5271489 - 5271774
Alignment:
Q  149 atacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-ttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    |||||||||||| ||| || ||||||||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |    
T  5271489 atacttcaaaatagatgacatactgtatcccttgcgtatcctgaaccgataccttcccgatacgtatcaggagagtatccggagattaaattttattt-t 5271587  T
Q  248 ttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattat 347  Q
    ||| |||| ||| ||||||||||||||  ||||||||| ||||   |||||||| || || |||||||||||||| |||||||| |||||||||||||||    
T  5271588 tttaaaaaaaattatccgatacttttcttatacatctgagatat--gagggataggcggtagaaaaccgatatgtgcgggctacatgatgtttctattat 5271685  T
Q  348 atttagtacatat--gtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttcttta 434  Q
    |||| ||| ||||  ||||| ||||||||||||||  ||||| | || ||||||||||||||||||||| |||||||||||||||||||    
T  5271686 atttggtatatatatgtaatcgactaagtaatgatgttttctgtgtaagatatatcatatatgtaattggctaattgtcgctttcttta 5271774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 317 - 480
Target Start/End: Original strand, 3983851 - 3984015
Alignment:
Q  317 atatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgac 416  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||||| || ||||    
T  3983851 atatgtgcgggctacctgatgtttctattatatttggtacatatgtcattgactaagtaatgatgttttctatttaggatatatcatatatgcaagtgac 3983950  T
Q  417 taattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| || |||||||    
T  3983951 taattgtcgctttctttattatctatattacttacatttatatttctattgttgccgccgtctgt 3984015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 325 - 478
Target Start/End: Original strand, 30226647 - 30226801
Alignment:
Q  325 gggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtc 424  Q
    ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  30226647 gggctacctaatgtttctgttatatttggtatatatgtaattgactaagtaatgatgctttctatttagaatatatcatatatgtaattgactaattgtc 30226746  T
Q  425 gctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtct 478  Q
    | ||||||||||||||||| ||||||||||||||||| |||||||| || |||||    
T  30226747 gttttctttattatcaatattacttacatttatatttttattgttgccgccgtct 30226801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 206 - 470
Target Start/End: Original strand, 15769005 - 15769250
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagca 305  Q
    |||||||||||  |||||||||||| ||||||||  |||| ||   |||||||| ||||||||||||||||||||||||||||||||                 
T  15769005 gatacgtatcacaagagtatccgaaaattaaattaaattttttaaaaaaacaattatccgatacttttcagatacatctgggataca------------- 15769091  T
Q  306 gtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatat 405  Q
          ||| ||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||  |||||||||||||||||| ||||    
T  15769092 ------aactgatatgtgcaggctacctgatgtttctattatatttggtatatatgtaattgactaagtgatgatgttttctatttaggatatatgatat 15769185  T
Q  406 atgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgt 470  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||| |||||||| |||||||||    
T  15769186 atgtaattgactaattgtcgctttctttcttattaatattacttaca-ttatatttctattgttgt 15769250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 457
Target Start/End: Original strand, 7754200 - 7754399
Alignment:
Q  261 atccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatattta----gtac 356  Q
    |||| |||||||| ||||||||||||| ||   ||| |||| |  ||||||||||||||||| | |  ||||| ||||||||||||||| ||    |||     
T  7754200 atccaatacttttaagatacatctggggtaa--gagcgataggtggtggaaaaccgatatgtgcagattacctaatgtttctattatatatatttggtat 7754297  T
Q  357 atatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacattta 455  Q
    |||||||||||| |||||||| ||  ||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  7754298 atatgtaattgattaagtaataatgttttttatttatgatatatcatatatgtaattgactaattgtcgttttctttattatcaatattacttacattta 7754397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 30226486 - 30226622
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacac 293  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||  ||| |||| ||| |||||||||||||||||| ||||||  |     
T  30226486 ccgatactttctgatacgtatcaagagagtatccgaagattaaattttattt-tttaaaaaccaattatctgatacttttcagatacatttgggat--at 30226582  T
Q  294 gagggataagcagtggaaaaccgatatgtacgggctacct 333  Q
    |||||||| || ||||||||||||||||| ||||||||||    
T  30226583 gagggataggcggtggaaaaccgatatgtgcgggctacct 30226622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 47642026 - 47642123
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  47642026 gatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcaccgatacttcccaatacgtatcagaagagtatccgaagattaaattttattt 47642123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 470
Target Start/End: Complemental strand, 1553853 - 1553716
Alignment:
Q  334 gatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttcttt 433  Q
    |||||||||||||| ||||  | |||||||||||||||||||||| |  | ||| ||||| |||||||||||||||||||||||| ||||| ||||||||    
T  1553853 gatgtttctattatttttaaaatatatgtaattgactaagtaatggtgttctctttttagaatatatcatatatgtaattgactagttgtcactttcttt 1553754  T
Q  434 attatcaata-tacttacatttatatttatattgttgt 470  Q
    ||||||| || |||||| |||||||||| | |||||||    
T  1553753 attatcattattacttatatttatatttttgttgttgt 1553716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 22289771 - 22289695
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||| ||||||||    
T  22289771 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttctttaaaaaataatcatctgatacttt 22289695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 25700828 - 25700904
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaatttta-tttatttttaaaacaatcatccgatactt 271  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  25700828 gatacttcctaatacgtatcaggagagtatccgaagattaaattttattttatttttaaaataattatccgatactt 25700904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 55269121 - 55268991
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctg------tacc-gatacttcctgatacgtatcaggagagtatccgaagattaaattt 240  Q
    ||||||||||||||||| |||||  ||||||| |||||| ||||      |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  55269121 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgatacttcccgatacgtatcaggagagtatccgaagattaaattt 55269022  T
Q  241 tatttatttttaaaacaatcatccgatactt 271  Q
    ||||| |||  |||| ||| |||||||||||    
T  55269021 tatttttttaaaaaataattatccgatactt 55268991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 10225260 - 10225134
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||| ||||||||| |||||  ||||||| |||||| |||| |||||||||| | |||||||||| ||||||||||| || |||||||||||||| |    
T  10225260 gatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatactttccgatacgtatccggagagtatccaaatattaaattttattttt 10225161  T
Q  248 ttttaaaacaatcatccgatacttttc 274  Q
    |   |||| ||| ||||||||||||||    
T  10225160 taaaaaaataattatccgatacttttc 10225134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 2567496 - 2567372
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||||||||||||| |||||  ||||  | |||||| |||| |||||||||||| ||||||||||  ||||||||||||| |||||||||||||| |    
T  2567496 gatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgatacttcccgatacgtatccagagagtatccgaatattaaattttattttt 2567397  T
Q  248 ttttaaaacaatcatccgatacttt 272  Q
    |   |||| ||| ||||||||||||    
T  2567396 taaaaaaataattatccgatacttt 2567372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 3983765 - 3983852
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttattt-ttaaaacaatcatccgatacttttcagatacat 282  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||   |||| ||| ||||||||||||||| ||||||    
T  3983765 gatacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaaaagaattatccgatacttttcaaatacat 3983852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 271
Target Start/End: Complemental strand, 19879201 - 19879078
Alignment:
Q  149 atacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    |||||||||||||||| |||||| ||||||| |||||| |||| ||||||| || || |||| |||| ||||||||||||||||||| |||||||||| |    
T  19879201 atacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatatgtataaggagagtatccgaagattcaattttattttt 19879102  T
Q  248 ttttaaaacaatcatccgatactt 271  Q
    |   |||| ||| |||||||||||    
T  19879101 taaaaaaataattatccgatactt 19879078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 21157781 - 21157704
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||| |||||||||||    
T  21157781 ccgatactttctgatacgtaccaggagagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 21157704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 22611483 - 22611358
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| ||||||| |||||  |||| |||||||| | || |||||||||| ||||||||||| || ||||||||||||||     
T  22611483 gatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaattttatttt 22611384  T
Q  247 tttttaaaacaatcatccgatacttt 272  Q
    ||   |||| ||| ||||||||||||    
T  22611383 ttaaaaaaataattatccgatacttt 22611358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 19421484 - 19421559
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||  ||| |||||||||||    
T  19421484 gatacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaagtaattatccgatactt 19421559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 438
Target Start/End: Complemental strand, 21382382 - 21382140
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacga 295  Q
    ||||| ||| |||||||||||  |||||||  | |||||||||||||||| |||  ||||||||  ||||||||||||||||||||||   ||||| |||    
T  21382382 gatacgtcccgatacgtatcaaaagagtatttggagattaaattttatttttttaaaaaacaattgtccgatacttttcagatacatcgaagatacgcga 21382283  T
Q  296 gggataagcagtggaaaaccgatatgtacgggctacctgatgtttctatta-tatttagtacatatgtaattgactaagtaatgatactttctatttagg 394  Q
    ||||    |||||||||| ||||| |  |  | ||  |||| ||||||||| | ||||| | ||||||||| |||||||||||  |  | ||| | | ||    
T  21382282 gggacggacagtggaaaatcgatacgcgcacgatatatgatatttctattattctttag-atatatgtaatggactaagtaatagtgttctctttatggg 21382184  T
Q  395 atatatcatatatgtaattgactaattgtcgctttctttattat 438  Q
    |||||||||||||||||| ||||||||||| ||||  |||||||    
T  21382183 atatatcatatatgtaatcgactaattgtcacttttattattat 21382140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 53192507 - 53192629
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| |||| || || ||| |||| |||||||| | || |||||||||| ||||||||||| || ||||||||||||||     
T  53192507 gatacttcaaaatggatgacgtaccgtataccctgagtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaattttatttt 53192606  T
Q  247 tttttaaaacaatcatccgatac 269  Q
    |||  |||| ||| |||||||||    
T  53192607 tttaaaaaataattatccgatac 53192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 13748499 - 13748423
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||    
T  13748499 ccgatactttccgatacgtatcagaagagtatccgaagattaaattttattt-tttttaaaataattatctgatactt 13748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 48333148 - 48333197
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48333148 gatacttcctgatacgtatcaggaaagtatccgaagattaaattttattt 48333197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 28968576 - 28968627
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28968576 ccgatacttcccgatacgtatcagaagagtatccgaagattaaattttattt 28968627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 42229740 - 42229791
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42229740 ccgatacttcctgatacgtatcagaagagtatccgaaaattaaattttattt 42229791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 983262 - 983312
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  983262 gatacttcccgatacgtatcaggagagtatccaaagattaaattttattta 983312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 2122775 - 2122824
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2122775 gatacttcccgatacgtatcaggagagaatccgaagattaaattttattt 2122824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 442
Target Start/End: Original strand, 29715870 - 29715955
Alignment:
Q  357 atatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaat 442  Q
    |||||||||  |||||||||| ||  | ||| ||| |||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  29715870 atatgtaatgaactaagtaataatgttctcttttttggatatatcatatatgtaattgactaattgtcacttttattattatcaat 29715955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 6134432 - 6134357
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||||| ||   |||| ||| |||||||||||    
T  6134432 gatacttcccgatatgtatcaggagagtatccgaagattaaatattattttttaaaaaaataattatccgatactt 6134357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 30787602 - 30787563
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30787602 gatacgtatcaggagagtatccgaagattaaattttattt 30787563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 37996863 - 37996785
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||| |||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  37996863 ccgatatttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 37996785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 48334091 - 48334137
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaatttta 242  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  48334091 gatacttcctgatacgtatcaagaaagtatccgaagattaaatttta 48334137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 7899769 - 7899720
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  7899769 gatatttcccgatacgtatcagaagagtatccgaagattaaattttattt 7899720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 41742122 - 41742073
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  41742122 gatacttcccgatacatatctggagagtatccgaagattaaattttattt 41742073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 1679750 - 1679699
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  1679750 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 1679699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 7327778 - 7327853
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||||| |||||||||| ||| ||||||| || |||||||||||||| |||  |||| ||| |||||||||    
T  7327778 ccgatacttcccgatacgtatccggatagtatccaaatattaaattttatttttttaaaaaataattatccgatac 7327853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 13353295 - 13353196
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||| ||||||||| |||||  ||||| | |||||| ||||  |||||| || || ||||||||||| ||| ||||||||||| |||||||||||||    
T  13353295 gatactttaaaatggatgacgtatcgtatctcctgcgtatcctgcgccgatatctgcccgatacgtatcaagagcgtatccgaagaataaattttattta 13353196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 35389816 - 35389867
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  35389816 ccgatacttcccgatacgtatcgggagagtatccaaatattaaattttattt 35389867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 40497396 - 40497447
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  40497396 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 40497447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 52684267 - 52684318
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| | ||||||||| ||||||||||||||| ||||||||||||||    
T  52684267 ccgatactttccgatacgtattaggagagtatccgaatattaaattttattt 52684318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 1528511 - 1528609
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| |||||   |||||| |||||| | || | |||||| | || |||||||||| ||||||||||| || ||||||||||||||    
T  1528511 gatacttcaaaatggatgacgtatcatatcccctgcgtatcatgcatcgatacctgcccgatacgtatccggagagtatccaaatattaaattttattt 1528609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 19349699 - 19349605
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    ||||||||||||||| | |||||  ||||| | || |||||||| || ||||| | || |||||||||||| ||||||| |||||||||||||||    
T  19349699 gatacttcaaaatggttgacgtatcgtatctcctgtgtaacctgcactgatacctgcccgatacgtatcagaagagtatacgaagattaaatttt 19349605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 40497339 - 40497393
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt 202  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||||    
T  40497339 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatactt 40497393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 45347375 - 45347441
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttt-taaaacaatcatccgatactt 271  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||  |||| ||| |||||||||||    
T  45347375 gatacgtatccgaagagtatccgaagattaaattttattttttttaaaaaataattatccgatactt 45347441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 21157712 - 21157680
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatc 226  Q
    |||||||||||||||||||||||||||||||||    
T  21157712 ccgatacttcctgatacgtatcaggagagtatc 21157680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 42465016 - 42464964
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||||||||||  |||||| |||| ||||||||    
T  42465016 gatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcaccgatac 42464964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 25700896 - 25700931
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25700896 ccgatacttcccgatacgtatcaggagagtatccga 25700931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 28882730 - 28882679
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| | |||||||||| ||||||||||| || ||||||||||||||    
T  28882730 ccgatactttccgatacgtatcgggagagtatccaaatattaaattttattt 28882679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 33240016 - 33240067
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || |||| |||||||||    
T  33240016 ccgatacttcccgatacgtatcgggagagtatccaaatattatattttattt 33240067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 39664024 - 39664083
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaa 253  Q
    ||||||||| | |||||||||||| | ||||| |||||||||| |||||||| |||||||    
T  39664024 ccgatactttccgatacgtatcagaatagtattcgaagattaatttttatttttttttaa 39664083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 45533032 - 45532981
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| | ||||||||| || ||||||||||||||    
T  45533032 ccgatacttcccgatacgtatccgaagagtatccaaatattaaattttattt 45532981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 48122891 - 48122966
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    |||||| |||| ||||||||||  |||||||||| || |||||||||||||| |||  |||| ||| |||||||||    
T  48122891 ccgatatttcccgatacgtatccagagagtatccaaatattaaattttatttttttaaaaaataattatccgatac 48122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 52121246 - 52121297
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||  |||||||||| ||||||||||| || ||||||||||||||    
T  52121246 ccgatacttctcgatacgtatcgggagagtatccaaatattaaattttattt 52121297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 3116648 - 3116698
Alignment:
Q  394 gatatatcatatatgtaattgactaattgtcgctttctttattatcaatat 444  Q
    ||||||||||||||||| | ||||||||||| ||||| | |||||||||||    
T  3116648 gatatatcatatatgtattcgactaattgtcactttcatcattatcaatat 3116698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 13353176 - 13353143
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  13353176 gatacttcccgatacgtatcaggagagtatccga 13353143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 47118193 - 47118258
Alignment:
Q  359 atgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtc 424  Q
    |||||||||| |||||||||||  | ||| ||| | |||||||||||| |||||||| ||||||||    
T  47118193 atgtaattgattaagtaatgatgttctcttttttgaatatatcatatacgtaattgattaattgtc 47118258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 47642143 - 47642176
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  47642143 gatacttcccgatacgtatcaggagagtatccga 47642176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 52505885 - 52505797
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatc 283  Q
    |||||| |||| |||||||||| | ||||||||| || |||||||||||||| |    |||| ||| |||||||||||||| ||||||||    
T  52505885 ccgatatttcccgatacgtatccgaagagtatccaaatattaaattttatttttcaaaaaaataattatccgatacttttc-gatacatc 52505797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 6134491 - 6134439
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||  ||||||| |||||| |||| ||||||||    
T  6134491 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac 6134439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 45347433 - 45347465
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatc 226  Q
    |||||||||||||||||||||||||| ||||||    
T  45347433 ccgatacttcctgatacgtatcaggaaagtatc 45347465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 48122834 - 48122886
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| ||| || |||| ||||||||    
T  48122834 gatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatac 48122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 194 - 473
Target Start/End: Original strand, 10666 - 10944
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacac 293  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||| ||| || |||| ||||||||  ||| || |||||||||||||||||||||||      
T  10666 ccgatacttctcgatacgtatcaggagagtatcagaagattaaatgttactttttttaaaaacaattctccaatccttttcagatacatctgggatac-- 10763  T
Q  294 gagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttag 393  Q
    ||| |||  || |||||||||  || ||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||     
T  10764 gagcgattggcggtggaaaactaatttgtgcgagctacctgatgtttctattatatttggtatatatgtaattgactaagtaatgatgttttctatttat 10863  T
Q  394 gatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgt 473  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||||  | ||||||||||||    
T  10864 gatatatcatatatgtaattgactaatcgtcgctttctttattattaatattacttagatttatacgtctattgttgtcgt 10944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 4e-67; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 194 - 480
Target Start/End: Original strand, 12190451 - 12190731
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt-atttttaaaacaatcatccgatacttttcagatacatctgggataca 292  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||||| |||||||||||||| || ||||| |||||| |||||||| |||||      
T  12190451 ccgatacttcttgatacgtatcaggagagtattcagagattaaattttattttatttttaaaacaattatacgatatttttcaaatacatctaggatat- 12190549  T
Q  293 cgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctattta 392  Q
     ||| ||     ||||||||||||||||||||| | ||  ||||||||||||||||||| ||| ||| ||||||| ||||||||||||  ||||||||||    
T  12190550 -gagtga-----agtggaaaaccgatatgtacgagttagttgatgtttctattatatttggtatatacgtaattg-ctaagtaatgatgttttctattta 12190642  T
Q  393 ggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||| | |||||||    
T  12190643 gaatatatcatatatgtaattgactaattgtcgctttctttattatcaatattacttatatttatatttctattggtgttgccgtctgt 12190731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 194 - 472
Target Start/End: Complemental strand, 41472665 - 41472394
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacac 293  Q
    |||||| | ||||||||||| ||| |||||||||||||||||| |||| ||        || |||| |||| |||||||||||||||||||| |||||      
T  41472665 ccgatattacctgatacgtagcagaagagtatccgaagattaatttttttt--------aaccaattatccaatacttttcagatacatctgagatact- 41472575  T
Q  294 gagggataagcagtggaaaac-cgatatgtacgggctacctgatgtttctattatatttag-tacatatgtaattgactaagtaatgatactttctattt 391  Q
     ||||||| |||||||||||  ||||||||  ||||||||||||||||||||||||||| | || |||| ||||||||||||||||||| ||||||||||    
T  41472574 -agggatatgcagtggaaaaatcgatatgtgggggctacctgatgtttctattatattttggtatatatataattgactaagtaatgatgctttctattt 41472476  T
Q  392 aggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcg 472  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||    
T  41472475 aggatatatcatatatgtaattgactaattgtcgctttatctattatcaatattacttacatttatatttctattgttgtcg 41472394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 252 - 465
Target Start/End: Complemental strand, 31036996 - 31036784
Alignment:
Q  252 aaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccgatatgtacgggctacctgatgtttctattatattt 351  Q
    |||| ||| ||||||| ||||| | ||||| | ||||||||| ||||||| || |||| | | |||||||  || |||||||||||||||||||||||||    
T  31036996 aaaaaaattatccgatgcttttaaaataca-cggggatacactagggataggcggtgggatatcgatatgcgcgagctacctgatgtttctattatattt 31036898  T
Q  352 agtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttac 450  Q
     ||| ||||||||||||| ||||| || |  | ||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||| ||||||     
T  31036897 ggtatatatgtaattgaccaagta-tggtgttctctatttaggatatatcatatatgtaattgattcattgtcgttttcattattatcaatactacttat 31036799  T
Q  451 atttatatttatatt 465  Q
    | |||||||||||||    
T  31036798 acttatatttatatt 31036784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 12852128 - 12852249
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||| || |||||||||||||| |    
T  12852128 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttcctgatacgtatccggagagtatccaaatattaaattttattttt 12852227  T
Q  248 ttttaaaacaatcatccgatac 269  Q
    ||  |||| ||| |||||||||    
T  12852228 ttaaaaaataattatccgatac 12852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 17916688 - 17916605
Alignment:
Q  398 tatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| |||||||||||||| ||||    
T  17916688 tatcatatatgtaattgactaattgccgctttctttattatcaatattccttacatttatatttctattgttgtcgtcggctgt 17916605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 414
Target Start/End: Original strand, 19321456 - 19321658
Alignment:
Q  211 gtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtgga 310  Q
    ||||||| ||||||||||||||||||||||||||| |    ||| ||||  || |||||||||||||||||||  |||||| ||||||||| ||||||||    
T  19321456 gtatcagaagagtatccgaagattaaattttattt-taaaaaaaccaattgtctgatacttttcagatacatcgtggatacgcgagggataggcagtgga 19321554  T
Q  311 aaaccgatatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgta 410  Q
    ||||||||| | ||| | ||| |||| |||||||||| ||| | |  ||  |||| ||||||||||| ||  | ||| |||  |||||||||||||||||    
T  19321555 aaaccgatacgcacgtgatacgtgatatttctattattttttggatgtacataatggactaagtaataatgttctctttttgagatatatcatatatgta 19321654  T
Q  411 attg 414  Q
    ||||    
T  19321655 attg 19321658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 6243267 - 6243170
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| ||||| |||||||  |||||| |||| |||||||||| | |||||||||| |||||||||||||| ||||||||||||||    
T  6243267 gatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcaccgatactttccgatacgtatccggagagtatccgaatattaaattttattt 6243170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 7629079 - 7629176
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||| ||||||||||| |||||  ||||||| |||||| | ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7629079 gatacctcaaaatggatgacgtatcgtatcccctgcgtatcttgtactgatacttcccgatacgtatcaggagagtatctgaagattaaattttattt 7629176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 26795102 - 26794976
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttat 247  Q
    ||||||| ||||||||| |||||  ||||||| |||||| |||| |||||||||| | |||||||||| ||||||||||| || |||||||||||||| |    
T  26795102 gatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatactttccgatacgtatccggagagtatccaaatattaaattttattttt 26795003  T
Q  248 ttttaaaacaatcatccgatacttttc 274  Q
    |   |||| ||| ||||||||||||||    
T  26795002 taaaaaaataattatccgatacttttc 26794976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 26691684 - 26691759
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  26691684 gatacttcccgatacgtatcaagagagtatccgaagattaaattttattttttttaaaaataattatccgatactt 26691759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 26961416 - 26961491
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  26961416 gatacttcccgatacgtatcaagagagtatccgaagattaaattttattttttttaaaaataattatccgatactt 26961491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 5612494 - 5612417
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||| |||||||||||    
T  5612494 ccgatactttctgatacgtaccaggagagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 5612417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 26716341 - 26716416
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||  |||| ||| |||||||||||    
T  26716341 gatacttcccgatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 26716416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 26986081 - 26986156
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||  |||| ||| |||||||||||    
T  26986081 gatacttcccgatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 26986156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 1795458 - 1795536
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttattttt-aaaacaatcatccgatactt 271  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||||| ||||| |||| ||| |||||||||||    
T  1795458 ccgatactttccgatacgtatcagaagagtatccgaagattaaattttatttttttttaaaaataattatccgatactt 1795536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 30284716 - 30284608
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac-----------ttcctgatacgtatcaggagagtatccgaagattaa 236  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||           |||| |||||||||||||||||||||||||||||||    
T  30284716 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatccgaagattaa 30284617  T
Q  237 attttattt 245  Q
    |||||||||    
T  30284616 attttattt 30284608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 39690815 - 39690737
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  39690815 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 39690737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 30777574 - 30777495
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttt-taaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||| ||||| ||| ||||||||||||    
T  30777574 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattttttttataaaataattatccgatacttt 30777495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 3934838 - 3934789
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3934838 gatacttaccgatacgtatcaggagagtatccgaagattaaattttattt 3934789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 17138304 - 17138255
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17138304 gatacttcccgatacgtatcaggagaatatccgaagattaaattttattt 17138255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 34032437 - 34032486
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  34032437 gatacttcccgatacgtatcaggagagtatccgaagattaatttttattt 34032486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 460
Target Start/End: Original strand, 21317404 - 21317472
Alignment:
Q  393 ggatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatattt 460  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||||| |||| | ||||||||||    
T  21317404 ggatatataatatatgtaattgactaattgtcactttatttattatcaatattactcatatttatattt 21317472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 11906284 - 11906335
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  11906284 ccgatacttcccgatacgtatccggagagtatccgaatattaaattttattt 11906335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 272
Target Start/End: Complemental strand, 18002014 - 18001939
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    |||||||| ||||| ||||||||||||||  |||||||||||||||||| |||| |||| ||| ||| ||||||||    
T  18002014 atacttcccgatacatatcaggagagtatttgaagattaaattttattttttttaaaaataattatctgatacttt 18001939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 27938172 - 27938302
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcct-gatacgt------atcaggagagtatccgaagattaaattt 240  Q
    ||||||||||||||||| ||||| |||||| |||||||| | || |||||||| | || |||| ||      ||||| ||||||||||||||||||||||    
T  27938172 gatacttcaaaatggatgacgtattgtatctcatgcgtatcatgcaccgatacatgctcgatatgtgtcagtatcagaagagtatccgaagattaaattt 27938271  T
Q  241 tatttatttttaaaacaatcatccgatactt 271  Q
    ||||| |||  |||| ||| |||||||||||    
T  27938272 tatttttttaaaaaataattatccgatactt 27938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 32707883 - 32707805
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| |||  |||| ||| ||| ||||||||    
T  32707883 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatctgatacttt 32707805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 3701266 - 3701315
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  3701266 gatacttcctgatatgtttcaggagagtatctgaagattaaattttattt 3701315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 1639891 - 1639839
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| ||||||||    
T  1639891 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatac 1639839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 21251533 - 21251592
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaa 255  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||| |||| |||| ||||    
T  21251533 gatactttccgatacgtatcaggagagtatccgaatattaaatttaattttttttgaaaa 21251592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 43357809 - 43357734
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||| | ||||||||| |  ||||||||||||||||||||||||||| |||  |||| ||| |||||||||||    
T  43357809 gatactttccgatacgtattaaaagagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 43357734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 1920904 - 1920954
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||| |||||||||  |||||||||||||||||||||||| |||||    
T  1920904 gatacttcccgatacgtattgggagagtatccgaagattaaatttcattta 1920954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 32624943 - 32625021
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||  | ||||||||| || |||||||||||||| |||  |||| ||| ||||||||||||    
T  32624943 ccgatacttcccgatacgtattcgaagagtatccaaatattaaattttatttttttaaaaaataattatccgatacttt 32625021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 41392823 - 41392769
Alignment:
Q  146 cagatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  41392823 cagatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 41392769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 36785088 - 36785172
Alignment:
Q  216 aggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggatacacgagggata 301  Q
    ||||| |||| |||||||||||||| |||||||||| ||| |||  ||| |||||||||||||||||| |  |||| |||||||||    
T  36785088 aggagggtattcgaagattaaattt-atttattttttaaataattgtccaatacttttcagatacatcagaaatactcgagggata 36785172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 1920972 - 1921008
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaatttta 242  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1920972 gatacctatcaggagagtatccgaagattaaatttta 1921008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 5612425 - 5612393
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatc 226  Q
    |||||||||||||||||||||||||||||||||    
T  5612425 ccgatacttcctgatacgtatcaggagagtatc 5612393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 30918387 - 30918439
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| ||||| |||||||| |||||| |||| ||||||||    
T  30918387 gatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatac 30918439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 33829762 - 33829814
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  33829762 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 33829814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 5722053 - 5722104
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||   |||| |||||||| |||||||||||||||||||||||||    
T  5722053 ccgatacttctcaatacatatcaggaaagtatccgaagattaaattttattt 5722104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 5986120 - 5986069
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||| |||||||||||  ||||||||||| || ||||||||||||||    
T  5986120 ccgatactttctgatacgtattgggagagtatccaaatattaaattttattt 5986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 9653831 - 9653906
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||||| |||||||||| | |||||||  || ||||||||||||||| |||| |||| ||| |||| ||||    
T  9653831 ccgatacttcccgatacgtatcggaagagtattggatgattaaattttattttttttaaaaataattatccaatac 9653906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 9792385 - 9792436
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| ||||||||||  |||||||||| || ||||||||||||||    
T  9792385 ccgatacttcccgatacgtatccagagagtatccaaatattaaattttattt 9792436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 19102068 - 19102001
Alignment:
Q  394 gatatatcatatatgtaattgactaattgtcgctttctttattatcaata-tacttacatttatattt 460  Q
    |||||||||||||| ||||||||||||||||  ||| |||||||| |||| |||||  ||||||||||    
T  19102068 gatatatcatatatataattgactaattgtcattttttttattattaatattacttgtatttatattt 19102001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 26716408 - 26716443
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26716408 ccgatacttcccgatacgtatcaggagagtatccga 26716443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 26986148 - 26986183
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26986148 ccgatacttcccgatacgtatcaggagagtatccga 26986183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 32728761 - 32728710
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || |||| |||||||||    
T  32728761 ccgatacttcccgatacgtatccggagagtatccaaatattagattttattt 32728710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 21317236 - 21317322
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttttcagatacatctgggataca 292  Q
    |||||||||| |||||||||| |||||||   |||| | | |||||||||||||  |  ||||||||||||||||||| ||| ||||    
T  21317236 gatacgtatccggagagtatctgaagatttttttttttatttttttaaaacaattgtttgatacttttcagatacatcgggggtaca 21317322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 17138235 - 17138202
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  17138235 gatacttcccgatacgtatcaggagagtatccga 17138202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 27085432 - 27085481
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||| | ||||||||||| ||||||||||| | ||||||||||||||    
T  27085432 gatactttccgatacgtatcaagagagtatccggaaattaaattttattt 27085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 33829821 - 33829866
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    ||||||||| |||||||||| ||||||||||| || ||||||||||    
T  33829821 gatacttcccgatacgtatccggagagtatccaaatattaaatttt 33829866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 10153833 - 10153877
Alignment:
Q  334 gatgtttctattatatttagtacatatgtaattgactaagtaatg 378  Q
    |||||||||||||| ||||| | |||||||||||||||| |||||    
T  10153833 gatgtttctattatttttaggatatatgtaattgactaaataatg 10153877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 15066216 - 15066280
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaatttta-tttatttttaaaacaatcatccgatac 269  Q
    |||||||||| | |||||||| || |||||||||||| ||||||||||||| ||| ||| |||||    
T  15066216 gatacgtatcggaagagtatcagatgattaaattttattttatttttaaaataattatctgatac 15066280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 480
Target Start/End: Original strand, 26560890 - 26561141
Alignment:
Q  219 agagtatccgaagattaaattttatttatttttaa-aacaatcatccgatacttttcagatacatctgggatacacgagggataagcagtggaaaaccga 317  Q
    |||||||||||||||||||||||||||      || || ||| ||||  |||||||||||||||| || ||||||  ||||||| || ||||||||   |    
T  26560890 agagtatccgaagattaaattttattttaaaaaaataataattatccattacttttcagatacatgtgagataca--agggataggcggtggaaaattca 26560987  T
Q  318 tatgtacgggctacctgatgtttctattatatttagtacatatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgact 417  Q
    ||| | |||||||  ||||||||||| ||||||| ||| |||||||||||||||| ||| ||   ||| ||||||||||||||||||||      |||||    
T  26560988 tatatgcgggctatatgatgtttctactatattttgtatatatgtaattgactaaataacgacgttttttatttaggatatatcatata------tgact 26561081  T
Q  418 aattgtcgctttctttattatcaatatacttacatttatatttatattgttgtcgtcgtctgt 480  Q
    |||| ||||||||||||||||  || ||||||||||||||||| ||||||||||| |||||||    
T  26561082 aattatcgctttctttattat--at-tacttacatttatatttctattgttgtcgccgtctgt 26561141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 31079621 - 31079745
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaatttta-ttta 246  Q
    ||||||| ||||||||| ||||| |||||||| |||||| |||| |||||||||||  |||| ||||||||| ||||||  |||||||||||||| ||||    
T  31079621 gatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacttctcgataagtatcaggatagtatcttaagattaaattttatttta 31079720  T
Q  247 tttttaaaacaatcatccgatactt 271  Q
    |||| |||| ||| ||| |||||||    
T  31079721 ttttaaaaataattatctgatactt 31079745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 10894681 - 10894583
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| |||||||  ||||| | || |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  10894681 gatacttcaaaatggatgacgtaccgtatcccc-gcgtatcatgcaccgatacctgcctgatacgtatcaggagagtatccaaagattaaattttattta 10894583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 19128219 - 19128296
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  19128219 ccgatactttccgatacgtatcagaagagtatccgaagattaaattttattttttttaaaaataattatccgatactt 19128296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 3212543 - 3212618
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatac 269  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| ||| ||||| ||| |||||||||    
T  3212543 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttataaaataattatccgatac 3212618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 7254939 - 7255038
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatactt-cctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||  | |||  ||||||| || ||| | || |||||||| | || |||||||||||| ||||||||||||||||||||||||||||    
T  7254939 gatacttcaaaatggacgatgtatcgtatcccctgtgtatcatgcaccgatacatgcccgatacgtatcagaagagtatccgaagattaaattttattta 7255038  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 31195921 - 31195843
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  31195921 ccgatacttcccgatacgtatctggagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 31195843  T

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Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 7188829 - 7188780
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  7188829 gatacttcctgatacgtatccggagagtatccaaatattaaattttattt 7188780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 10894561 - 10894516
Alignment:
Q  206 gatacgtatcaggagagtatccgaagattaaattttatttattttt 251  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||    
T  10894561 gatacgtatcaggagagtatccgaagattaaattttgttttttttt 10894516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 2423031 - 2423095
Alignment:
Q  408 gtaattgactaattgtcgctttctttattatcaata-tacttacatttatatttatattgttgtc 471  Q
    ||||||||||||||||| |||||||||||||||||| || ||| |||| ||||||| ||||||||    
T  2423031 gtaattgactaattgtcactttctttattatcaatattatttatatttttatttatgttgttgtc 2423095  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 11105353 - 11105429
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatactt 271  Q
    |||||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||  |||| ||| || ||||||||    
T  11105353 cgatactttctgatacgtatcagaagaatattcgaagattaaattttatttttttaaaaaataattattcgatactt 11105429  T

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Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 26327221 - 26327271
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  26327221 ccgatacttcccgatacgtataag-agagtatccgaagattaaattttattt 26327271  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 234372 - 234452
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaa---attttatttatttttaaaacaatcatccgatactt 271  Q
    ||||||||| | |||||||||||| ||||||||||||||||||    |||| ||| ||||||||| ||| |||||||||||    
T  234372 ccgatactttccgatacgtatcagaagagtatccgaagattaactttttttttttttttttaaaataattatccgatactt 234452  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 1036878 - 1036800
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||| | |||||||||| ||||||||||  || |||||||||||||| |||  |||| ||| ||||||||||||    
T  1036878 ccgatactttccgatacgtatccggagagtatctaaatattaaattttatttttttaaaaaataattatccgatacttt 1036800  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 8357024 - 8357102
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgatacttt 272  Q
    ||||||||||| |||||||||| | ||||||||| || |||||||||||||| ||   |||| ||| ||||||||||||    
T  8357024 ccgatacttcccgatacgtatccgaagagtatccaaatattaaattttattttttaaaaaaataattatccgatacttt 8357102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 13607827 - 13607781
Alignment:
Q  204 ctgatacgtatcaggagagtatccgaagattaaattttatttatttt 250  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||    
T  13607827 ctgatacgtatcaggagagtatccgaagattaactttattttatttt 13607781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 32130710 - 32130660
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  32130710 cgatatttcccgatacgtatcaggagagtatccaaatattaaattttattt 32130660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 27084054 - 27084103
Alignment:
Q  197 atacttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||  |||||||| |||||||||||| ||||||||||||||||||    
T  27084054 atacttcccaatacgtataaggagagtatccaaagattaaattttattta 27084103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 9421147 - 9421103
Alignment:
Q  252 aaaacaatcatccgatacttttcagatacatctgggatacacgag 296  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||    
T  9421147 aaaacaattatccgatacttttcagatacatctaggatacgcgag 9421103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 31079739 - 31079778
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagatta 235  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  31079739 gatacttcccgatacgtatcaggagagtatccgatgatta 31079778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 6708076 - 6708042
Alignment:
Q  211 gtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||||||||||| ||||||    
T  6708076 gtatcaggagagtatccgaagattaaatattattt 6708042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 229
Target Start/End: Complemental strand, 10894501 - 10894467
Alignment:
Q  195 cgatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||||| |||||||||||||||||||||||    
T  10894501 cgatacttcctaatacgtatcaggagagtatccga 10894467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 7255058 - 7255091
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccga 229  Q
    ||||||||| ||||||||||||||||||||||||    
T  7255058 gatacttcccgatacgtatcaggagagtatccga 7255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 42174 - 42077
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||| ||||||||||  |||||||||| || ||||||||||||||    
T  42174 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacttcccgatacgtatctagagagtatccaaatattaaattttattt 42077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 25639 - 25542
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||||||||| ||| || ||||||| ||||||  ||| |||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  25639 gatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcaccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 25542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 268
Target Start/End: Complemental strand, 27890 - 27769
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaattttattta 246  Q
    ||||||||||||||||| |||||| ||||||| ||| || |||| ||||||| ||  | |||||||||| | ||||||||| || ||||||||||||||     
T  27890 gatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgtccgatacgtatccgcagagtatccaaatattaaattttatttt 27791  T
Q  247 tttttaaaacaatcatccgata 268  Q
    |||  |||| ||| ||||||||    
T  27790 tttaaaaaataattatccgata 27769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 13318 - 13388
Alignment:
Q  196 gatacttcctgatacgtatcaggagagtatccgaagattaaattttatttatttttaaaacaatcatccgat 267  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||| |||| ||| |||||||    
T  13318 gatacttcccgatacgtatcaagagagtatctgaagattaaattttattt-ttttaaaaataattatccgat 13388  T

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Target: scaffold0060 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 30496 - 30445
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  30496 ccgatacttcctgatacgtatccggagagtatccaaatattaaattttattt 30445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 36568 - 36648
Alignment:
Q  358 tatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattat 438  Q
    ||||||||||||||| |||||||  | | | ||| || |||||||||||||||||||||||||| |  |||||||||||||    
T  36568 tatgtaattgactaaataatgatgttctttttttggggtatatcatatatgtaattgactaatttttactttctttattat 36648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 8144 - 8093
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  8144 ccgatacttcccgatacgtatccggagagtatccaaatattaaattttattt 8093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 5578 - 5629
Alignment:
Q  194 ccgatacttcctgatacgtatcaggagagtatccgaagattaaattttattt 245  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  5578 ccgatacttcccgatacgtatcgggagagtatccaaatattaaattttattt 5629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 13875 - 13969
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgata-cttcctgatacgtatcaggagagtatccgaagattaaatttt 241  Q
    ||||||||||||||||| ||||||||||||   |||||| |||| || | || || || |||||||||| ||||||||||| || ||||||||||    
T  13875 gatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcactgttacctacccgatacgtatccggagagtatccaaatattaaatttt 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 44699 - 44647
Alignment:
Q  148 gatacttcaaaatggataacgtactgtatcccatgcgtaacctgtaccgatac 200  Q
    ||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  44699 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 44647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 438
Target Start/End: Complemental strand, 2964 - 2884
Alignment:
Q  358 tatgtaattgactaagtaatgatactttctatttaggatatatcatatatgtaattgactaattgtcgctttctttattat 438  Q
    ||||||||||||| | |||||||  | | | ||| || ||||||||||||||||| |||||||| |  |||||||||||||    
T  2964 tatgtaattgactgaataatgatgttctttttttggggtatatcatatatgtaatcgactaatttttactttctttattat 2884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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