View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0964_low_23 (Length: 386)
Name: NF0964_low_23
Description: NF0964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0964_low_23 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 7 - 358
Target Start/End: Original strand, 21111285 - 21111636
Alignment:
| Q |
7 |
tccaacaatataaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatca |
106 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111285 |
tccaacaaaacaaccccataactataaacatccactttagatgttattggtgaattggaaatccattcaggggccatatatcctcttgttcctctaatca |
21111384 |
T |
|
| Q |
107 |
ttgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatatt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111385 |
ttgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatatt |
21111484 |
T |
|
| Q |
207 |
ttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactc |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111485 |
ttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactc |
21111584 |
T |
|
| Q |
307 |
caatcaagtgtgttagttttagatgaaagattttcagctaaagatccatttt |
358 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111585 |
caatcaagtgtgttagttttagatgaaagattttcagctaaagatccatttt |
21111636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 18 - 358
Target Start/End: Original strand, 21123128 - 21123468
Alignment:
| Q |
18 |
aaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattct |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123128 |
aaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattct |
21123227 |
T |
|
| Q |
118 |
gaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123228 |
gaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggttgaaagttagaatcaagaagtatattttgaggcttta |
21123327 |
T |
|
| Q |
218 |
tatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
317 |
Q |
| |
|
||||||||||||| ||||| || | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123328 |
tatcacaatgcaaaatccactccatacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
21123427 |
T |
|
| Q |
318 |
gttagttttagatgaaagattttcagctaaagatccatttt |
358 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123428 |
gttagttttagatgaaagattttcagctaaagatccatttt |
21123468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 3 - 358
Target Start/End: Original strand, 18658403 - 18658758
Alignment:
| Q |
3 |
catctccaacaatataaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctcta |
102 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18658403 |
catctccaacaatacaaccccataaccataaacatccactttagatgttattggcaaattgaaaatccactcaggggccatatatcctcttgttcctcta |
18658502 |
T |
|
| Q |
103 |
atcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagta |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
18658503 |
atcattgagaattctgaattattattaagactgtttcgggttttcagcttagataatccaaaatctgctaacttagggtgaaagttagaatcaagaagta |
18658602 |
T |
|
| Q |
203 |
tattttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcatacctttt |
302 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18658603 |
tgttttgaggctttatatcacaatgcaaaatccattccaaacattcttcatgtagataagctagaactttagctgttcctaaagcaatatcatacctttt |
18658702 |
T |
|
| Q |
303 |
actccaatcaagtgtgttagttttagatgaaagattttcagctaaagatccatttt |
358 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18658703 |
actccagtcaagtgtgttagttttagatgaaagattttcagctaaagatccatttt |
18658758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 18 - 358
Target Start/End: Original strand, 21130256 - 21130596
Alignment:
| Q |
18 |
aaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattct |
117 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
21130256 |
aaccccgtaactataaacatccactttagatgttattggtaaattgaaaatccactcaggtgccatatatcctcgtgttcctctaatcattgagaatcct |
21130355 |
T |
|
| Q |
118 |
gaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
217 |
Q |
| |
|
||| |||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21130356 |
gaactattatcgagattgtttcgattttgtagcttagacaatccaaaatcggctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
21130455 |
T |
|
| Q |
218 |
tatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
317 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21130456 |
tatcacaatgcaaaatccattccaaacattcttcatgtagatatgctaaaactctagctgttcctaaagcaatatcataccttttagtccaatcaagtgt |
21130555 |
T |
|
| Q |
318 |
gttagttttagatgaaagattttcagctaaagatccatttt |
358 |
Q |
| |
|
||| ||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
21130556 |
gttggttttggatgaaagattttccgctaaagaaccatttt |
21130596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 22 - 315
Target Start/End: Complemental strand, 21108562 - 21108272
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
121 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
21108562 |
ccataactataaacatccaccttagatgttattggcaaattgaaaatccattcaggtgccatataccctcttgttcctctaatcattgagatgcatga-- |
21108465 |
T |
|
| Q |
122 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
221 |
Q |
| |
|
||||||||| ||||| ||| ||| |||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
21108464 |
-attattaaggttgttcctgttttgcagctttgacaatccaaaatcggctaacttgggctggaagttagaatcaagaagtatgttttgtggctttatatc |
21108366 |
T |
|
| Q |
222 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagt |
315 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||||||| || | ||| || ||| || |||| |||| | ||||||||||||||||||||| |
|
|
| T |
21108365 |
acaatgcaaaatccactccaaacattcttcatgtagatatgctaaaactcttgctattgataaaacaattttgtaccttttactccaatcaagt |
21108272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 22 - 315
Target Start/End: Complemental strand, 21098943 - 21098653
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
121 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||||||||||| || | ||||| |
|
|
| T |
21098943 |
ccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggggccatataccctcttgttcctctaatcatagatacacttgaat |
21098844 |
T |
|
| Q |
122 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
221 |
Q |
| |
|
| || |||||||||||| ||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21098843 |
tgttg---agattgtttctgttttgcagcttagacaatccaaaatccgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatc |
21098747 |
T |
|
| Q |
222 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagt |
315 |
Q |
| |
|
|||||| || |||||||| | |||||||||||||||||| || | ||| || || || ||||||||| | ||||||||||||||||||||| |
|
|
| T |
21098746 |
acaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttcctattgataaagcaattttgtaccttttactccaatcaagt |
21098653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 3 - 350
Target Start/End: Complemental strand, 39132495 - 39132148
Alignment:
| Q |
3 |
catctccaacaatataaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctcta |
102 |
Q |
| |
|
|||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
39132495 |
catctccaacaaaacaatcccataactataaacatccactttagatgttattggtaaattgaaaacccattcaggagccatatatcctcttgttcctcta |
39132396 |
T |
|
| Q |
103 |
atcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagta |
202 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||| || ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
39132395 |
atcattgagaattctgaattactattgacattgtttctatttctcagcttagacaatccaaagtctgctaacttgggttgatagttagaatcaagaagta |
39132296 |
T |
|
| Q |
203 |
tattttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcatacctttt |
302 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| || | ||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| |
|
|
| T |
39132295 |
tattttgaggctttatatcacaatgtaaaatccactccaaacattcttcatgtagataagctaggactctagctgttcctaaagcaatatcatacctttt |
39132196 |
T |
|
| Q |
303 |
actccaatcaagtgtgttagttttagatgaaagattttcagctaaaga |
350 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
39132195 |
actccaatcaagcatgttagttttagatgaaagattttcagctaaaga |
39132148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 316
Target Start/End: Original strand, 26675300 - 26675591
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
121 |
Q |
| |
|
||||||||||||||||| || || || || ||||| || ||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
26675300 |
ccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
26675399 |
T |
|
| Q |
122 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
221 |
Q |
| |
|
||||| |||||||| || | ||||||||||| ||||||||| ||| ||||| | | | ||| |||| |||||| ||||||||||||||||| |
|
|
| T |
26675400 |
tatta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
26675496 |
T |
|
| Q |
222 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagtg |
316 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| | | || ||||||| |||||| | |||||| |||| ||||||||||| |
|
|
| T |
26675497 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtg |
26675591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 267
Target Start/End: Complemental strand, 26690781 - 26690539
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
121 |
Q |
| |
|
||||| ||||||||||| || || || || ||||| || ||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
26690781 |
ccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
26690682 |
T |
|
| Q |
122 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
221 |
Q |
| |
|
||| | |||||||| || | | ||||||||| |||||||| |||| |||||| || | || || |||| ||||| ||||| |||||||| || |
|
|
| T |
26690681 |
tatca---agattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtc |
26690585 |
T |
|
| Q |
222 |
acaatgcaatatccattcgagacattcttcatgtagataagcaaga |
267 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
26690584 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaaga |
26690539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 315
Target Start/End: Original strand, 26698635 - 26698802
Alignment:
| Q |
148 |
agcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacatt |
247 |
Q |
| |
|
||||||||||| ||||||||||||| ||| || ||| | | || |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| | |
|
|
| T |
26698635 |
agcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgcaatgcaaaatccactccaaacact |
26698734 |
T |
|
| Q |
248 |
cttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagt |
315 |
Q |
| |
|
|||| |||| |||||||||| | | || ||||| | |||||| | ||||||||||| |||||||||| |
|
|
| T |
26698735 |
cttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagt |
26698802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 267
Target Start/End: Complemental strand, 26732092 - 26731850
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
121 |
Q |
| |
|
||||| ||||||||||| || || || || ||||| || ||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
26732092 |
ccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
26731993 |
T |
|
| Q |
122 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
221 |
Q |
| |
|
||| | |||||||| || | | ||||||||| |||||||| |||| |||||| || | | ||| |||| ||||| ||||| |||||||| || |
|
|
| T |
26731992 |
tatca---agattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaatcagagtcaattagtatgttttgcggctttatgtc |
26731896 |
T |
|
| Q |
222 |
acaatgcaatatccattcgagacattcttcatgtagataagcaaga |
267 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
26731895 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaaga |
26731850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 315
Target Start/End: Original strand, 26733798 - 26733965
Alignment:
| Q |
148 |
agcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacatt |
247 |
Q |
| |
|
||||||||||| ||||||||||||| ||| || ||| | | || |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| | |
|
|
| T |
26733798 |
agcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgcaatgcaaaatccactccaaacact |
26733897 |
T |
|
| Q |
248 |
cttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagt |
315 |
Q |
| |
|
|||| |||| |||||||||| | | || ||||| | |||||| | ||||||||||| |||||||||| |
|
|
| T |
26733898 |
cttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagt |
26733965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 315
Target Start/End: Original strand, 26744034 - 26744201
Alignment:
| Q |
148 |
agcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacatt |
247 |
Q |
| |
|
||||| ||||| |||||||| |||| ||| || || | | ||| |||| |||||| ||||| |||||||||||||||||||| ||||| || | ||||| |
|
|
| T |
26744034 |
agcttggacaaaccaaaatccgctaccttcggttggtaatcagagtcaacaagtatgttttgcggctttatatcacaatgcaaaatccactccaaacatt |
26744133 |
T |
|
| Q |
248 |
cttcatgtagataagcaagaacactagctgttcctaaagcaatatcataccttttactccaatcaagt |
315 |
Q |
| |
|
|||| |||| ||||||||| | | || ||||| | |||||| | |||||||||||||||||||||| |
|
|
| T |
26744134 |
cttcgtgtaaataagcaaggccctttgcagttcccatagcaatgttataccttttactccaatcaagt |
26744201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 267
Target Start/End: Complemental strand, 26694942 - 26694700
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
121 |
Q |
| |
|
||||| ||||||||||| || || || || ||||| || ||| ||||||||||||| |||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
26694942 |
ccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtcccatgtaacctcttgttcctctcatccttgagaaacttgaat |
26694843 |
T |
|
| Q |
122 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
221 |
Q |
| |
|
||| | | |||||| || | | ||||||||| |||||||| |||| |||||| || | || || |||| ||||| ||||| |||||||| || |
|
|
| T |
26694842 |
tatca---aaattgttcctttgtactaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtc |
26694746 |
T |
|
| Q |
222 |
acaatgcaatatccattcgagacattcttcatgtagataagcaaga |
267 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
26694745 |
acaatgcaaaatccactccaaacattcttcatgtaaataggcaaga |
26694700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 26737023 - 26737142
Alignment:
| Q |
148 |
agcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacatt |
247 |
Q |
| |
|
||||||||||| ||||||||||| | ||| || || | | ||| |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| | |
|
|
| T |
26737023 |
agcttagacaaaccaaaatctgcaaccttaggtcgataatcagagtcaacaagtatgttttgcggctttatatcgcaatgcaaaatccactccaaacact |
26737122 |
T |
|
| Q |
248 |
cttcatgtagataagcaaga |
267 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
26737123 |
cttcatgtaaataagcaaga |
26737142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 26713787 - 26713906
Alignment:
| Q |
148 |
agcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacatt |
247 |
Q |
| |
|
||||||||||| ||||||||||| | ||| || || | | | | |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| | |
|
|
| T |
26713787 |
agcttagacaaaccaaaatctgcaaccttaggtcgataatcatagtcaacaagtatgttttgcggctttatatcgcaatgcaaaatccactccaaacact |
26713886 |
T |
|
| Q |
248 |
cttcatgtagataagcaaga |
267 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
26713887 |
cttcatgtaaataagcaaga |
26713906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 47212075 - 47212153
Alignment:
| Q |
22 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctc |
100 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||| || ||||||||||||| |
|
|
| T |
47212075 |
ccatagctataaacatcaactttagatgttattgaatgattcaaaatccactcaggtgccatgtaacctcttgttcctc |
47212153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 26713645 - 26713766
Alignment:
| Q |
3 |
catctccaacaatataaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctcta |
102 |
Q |
| |
|
||||||||||| | ||| ||||| ||||||||||||||||| || || ||| | | ||| ||| ||||||||| ||||| || |||| ||| |||| | |
|
|
| T |
26713645 |
catctccaacaccacaactccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcgtgtccctcga |
26713744 |
T |
|
| Q |
103 |
atcattgagaattctgaattat |
124 |
Q |
| |
|
||| ||||||| | |||||||| |
|
|
| T |
26713745 |
atccttgagaagtttgaattat |
26713766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 26736881 - 26737002
Alignment:
| Q |
3 |
catctccaacaatataaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctcta |
102 |
Q |
| |
|
||||||||||| | ||| ||||| ||||||||||||||||| || || ||| | | ||| ||| ||||||||| ||||| || |||| ||| |||| | |
|
|
| T |
26736881 |
catctccaacaccacaactccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcgtgtccctcga |
26736980 |
T |
|
| Q |
103 |
atcattgagaattctgaattat |
124 |
Q |
| |
|
||| ||||||| | |||||||| |
|
|
| T |
26736981 |
atccttgagaagtttgaattat |
26737002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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