View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0964_low_36 (Length: 333)
Name: NF0964_low_36
Description: NF0964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0964_low_36 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 14787114 - 14786876
Alignment:
| Q |
95 |
catgtaccgttaatgaaatatttttatacatttatccaatcatttgttatcgtgtaatgttttttacgacattttagcgtcataaaagattcattatagt |
194 |
Q |
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| T |
14787114 |
catgtaccgttaattaaatatttttatacatttatccaaccatttgttatcgtgtaatgttttttacgatattttagcgtcataaaagattcattatagt |
14787015 |
T |
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| Q |
195 |
atggtttgattgaatgtatatatgtttaaacaagttttatattattggtgtatatcaattagtgttaataaatctataatcattcatcataatgtaacta |
294 |
Q |
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| T |
14787014 |
atggtttgattgaatgtatatatgtttaaacaagttttatattattggtgtatatcaattagtgttaataaatacataatcatttatcataatgtaacta |
14786915 |
T |
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| Q |
295 |
taatcatatgcaggtaacgcgtctcaagtgtggtggttt |
333 |
Q |
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| T |
14786914 |
taaccatatgcaggtaacgcgtctcaagtgtggtggttt |
14786876 |
T |
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