View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0964_low_39 (Length: 314)
Name: NF0964_low_39
Description: NF0964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0964_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 23914889 - 23915020
Alignment:
| Q |
105 |
aagaatttggttcaacttttaggttggtgtgttgagaaaggtgaattgttacttgtgtatgagtttatggccaatggtagtttagataagtttcttcata |
204 |
Q |
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| T |
23914889 |
aagaatttggttcaacttttaggttggtgtgttgagaaaggtgaattgttacttgtgtatgagtttatggttaatggtagtttagataagtttcttcata |
23914988 |
T |
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| Q |
205 |
gagaattatctcatgagtgtgatattttgttg |
236 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
23914989 |
gagaattatctcatgagtgtgatattttgttg |
23915020 |
T |
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