View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0964_low_40 (Length: 312)

Name: NF0964_low_40
Description: NF0964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0964_low_40
NF0964_low_40
[»] scaffold0007 (1 HSPs)
scaffold0007 (228-312)||(11310-11394)
[»] chr8 (33 HSPs)
chr8 (228-312)||(33114145-33114229)
chr8 (228-312)||(40309457-40309541)
chr8 (228-312)||(44062030-44062114)
chr8 (228-312)||(4374258-4374342)
chr8 (228-312)||(7818519-7818603)
chr8 (228-312)||(10805993-10806077)
chr8 (228-312)||(11998501-11998585)
chr8 (228-312)||(11999037-11999121)
chr8 (228-312)||(16889785-16889869)
chr8 (228-312)||(30115412-30115496)
chr8 (228-312)||(38778199-38778283)
chr8 (228-312)||(43481238-43481322)
chr8 (228-312)||(2209051-2209135)
chr8 (228-312)||(16889240-16889324)
chr8 (228-312)||(16879933-16880017)
chr8 (228-312)||(30115953-30116037)
chr8 (228-312)||(33113620-33113704)
chr8 (228-312)||(39852199-39852283)
chr8 (228-312)||(39852760-39852844)
chr8 (228-312)||(43591052-43591136)
chr8 (228-312)||(44062553-44062637)
chr8 (233-312)||(43480661-43480740)
chr8 (234-312)||(7819060-7819138)
chr8 (228-312)||(4374949-4375033)
chr8 (240-312)||(16880487-16880559)
chr8 (228-312)||(38778752-38778836)
chr8 (228-312)||(43591573-43591657)
chr8 (230-312)||(35237304-35237386)
chr8 (228-312)||(10806394-10806478)
chr8 (228-312)||(36848158-36848238)
chr8 (234-312)||(4373731-4373809)
chr8 (229-306)||(40907649-40907723)
chr8 (229-306)||(35237833-35237899)
[»] chr7 (30 HSPs)
chr7 (228-312)||(36682880-36682964)
chr7 (228-312)||(47814016-47814100)
chr7 (228-312)||(4895039-4895123)
chr7 (228-312)||(32499294-32499378)
chr7 (228-312)||(36683421-36683505)
chr7 (228-312)||(47814592-47814676)
chr7 (228-305)||(24044000-24044077)
chr7 (228-309)||(42455969-42456050)
chr7 (228-312)||(4894544-4894628)
chr7 (228-312)||(32499830-32499913)
chr7 (228-312)||(34853436-34853520)
chr7 (228-312)||(46732612-46732696)
chr7 (229-312)||(30711833-30711916)
chr7 (230-312)||(18520902-18520984)
chr7 (230-312)||(19816309-19816391)
chr7 (228-306)||(27855616-27855694)
chr7 (229-306)||(22275475-22275552)
chr7 (228-312)||(19816849-19816933)
chr7 (228-312)||(33806014-33806098)
chr7 (228-312)||(34853953-34854037)
chr7 (228-312)||(46815019-46815103)
chr7 (228-311)||(36620697-36620780)
chr7 (230-312)||(22276035-22276117)
chr7 (228-312)||(42456473-42456557)
chr7 (228-312)||(46814450-46814534)
chr7 (228-309)||(24323939-24324020)
chr7 (230-309)||(46012899-46012978)
chr7 (228-312)||(36620163-36620247)
chr7 (234-293)||(27856106-27856165)
chr7 (247-292)||(29060073-29060118)
[»] chr5 (20 HSPs)
chr5 (228-312)||(42408522-42408606)
chr5 (228-312)||(3739620-3739704)
chr5 (228-312)||(33430087-33430171)
chr5 (228-312)||(3957545-3957629)
chr5 (228-312)||(4928916-4929000)
chr5 (228-312)||(26687545-26687629)
chr5 (228-312)||(26957276-26957360)
chr5 (228-312)||(28075926-28076010)
chr5 (234-312)||(5324366-5324444)
chr5 (228-312)||(8813640-8813724)
chr5 (229-312)||(4929464-4929547)
chr5 (228-312)||(3739045-3739129)
chr5 (228-306)||(26688013-26688092)
chr5 (228-306)||(26957744-26957823)
chr5 (228-310)||(21770045-21770127)
chr5 (228-312)||(3958091-3958175)
chr5 (228-312)||(13738105-13738188)
chr5 (230-309)||(42408040-42408119)
chr5 (228-278)||(8813134-8813184)
chr5 (254-292)||(12707058-12707096)
[»] chr4 (48 HSPs)
chr4 (228-312)||(20075570-20075654)
chr4 (228-312)||(31876833-31876917)
chr4 (230-312)||(32291060-32291142)
chr4 (228-312)||(2713800-2713884)
chr4 (228-312)||(12640010-12640094)
chr4 (228-312)||(20076143-20076227)
chr4 (228-312)||(20422688-20422772)
chr4 (228-312)||(25369828-25369912)
chr4 (228-312)||(25370349-25370433)
chr4 (228-312)||(26424361-26424445)
chr4 (228-312)||(28223608-28223692)
chr4 (228-312)||(36944655-36944739)
chr4 (228-312)||(36945180-36945264)
chr4 (228-312)||(37567431-37567515)
chr4 (232-312)||(48091056-48091136)
chr4 (228-312)||(52597668-52597752)
chr4 (228-305)||(199051-199128)
chr4 (228-312)||(388798-388882)
chr4 (228-312)||(389362-389446)
chr4 (228-312)||(32901896-32901980)
chr4 (228-312)||(32902422-32902506)
chr4 (228-312)||(48782031-48782115)
chr4 (228-312)||(52597535-52597619)
chr4 (228-312)||(55815870-55815954)
chr4 (228-312)||(55816407-55816491)
chr4 (228-312)||(29809044-29809128)
chr4 (228-312)||(33569765-33569849)
chr4 (229-309)||(35427293-35427373)
chr4 (230-306)||(37566954-37567030)
chr4 (228-309)||(36111174-36111255)
chr4 (228-308)||(31842680-31842760)
chr4 (228-312)||(40344548-40344632)
chr4 (228-312)||(40345087-40345171)
chr4 (230-312)||(40848089-40848171)
chr4 (228-312)||(12640543-12640627)
chr4 (228-312)||(31877389-31877473)
chr4 (228-312)||(48781527-48781611)
chr4 (230-312)||(3708818-3708900)
chr4 (228-306)||(20422182-20422257)
chr4 (230-312)||(6862692-6862774)
chr4 (261-312)||(199216-199267)
chr4 (263-312)||(40847722-40847771)
chr4 (228-312)||(26423804-26423877)
chr4 (228-271)||(35427839-35427882)
chr4 (272-312)||(48090511-48090551)
chr4 (272-312)||(47328397-47328437)
chr4 (245-297)||(43079220-43079272)
chr4 (280-312)||(47321804-47321836)
[»] chr3 (47 HSPs)
chr3 (228-312)||(3944940-3945024)
chr3 (228-312)||(37374860-37374944)
chr3 (229-312)||(42356281-42356364)
chr3 (228-312)||(23584840-23584924)
chr3 (228-312)||(23599663-23599747)
chr3 (228-312)||(29342950-29343034)
chr3 (228-312)||(41875573-41875657)
chr3 (228-312)||(44868052-44868136)
chr3 (228-312)||(48218636-48218720)
chr3 (228-312)||(49752318-49752402)
chr3 (228-312)||(50687665-50687749)
chr3 (228-307)||(19555880-19555959)
chr3 (228-310)||(47737630-47737712)
chr3 (228-309)||(55281883-55281964)
chr3 (228-312)||(8427700-8427784)
chr3 (228-312)||(25025219-25025303)
chr3 (228-312)||(29342386-29342470)
chr3 (228-312)||(31014382-31014466)
chr3 (228-312)||(31014881-31014965)
chr3 (228-312)||(32672211-32672295)
chr3 (228-312)||(32672740-32672824)
chr3 (228-312)||(37374563-37374647)
chr3 (228-312)||(38575599-38575683)
chr3 (228-312)||(49752867-49752951)
chr3 (233-311)||(40887903-40887981)
chr3 (228-306)||(44868575-44868653)
chr3 (228-312)||(19555315-19555399)
chr3 (233-309)||(24220627-24220703)
chr3 (228-312)||(25025721-25025805)
chr3 (228-312)||(37374010-37374094)
chr3 (228-312)||(37375425-37375509)
chr3 (228-312)||(50675082-50675166)
chr3 (230-312)||(38575066-38575148)
chr3 (230-312)||(43658854-43658936)
chr3 (228-309)||(48219192-48219273)
chr3 (228-304)||(8427269-8427345)
chr3 (229-312)||(23584282-23584365)
chr3 (229-312)||(23599105-23599188)
chr3 (229-312)||(24221130-24221213)
chr3 (228-312)||(47737108-47737192)
chr3 (240-312)||(55282390-55282462)
chr3 (231-312)||(43103944-43104025)
chr3 (228-297)||(50674684-50674753)
chr3 (228-289)||(3945466-3945527)
chr3 (228-305)||(42356766-42356843)
chr3 (229-260)||(43658332-43658363)
chr3 (228-257)||(50687185-50687214)
[»] chr2 (35 HSPs)
chr2 (228-312)||(11256161-11256245)
chr2 (228-312)||(39477282-39477366)
chr2 (228-312)||(3595291-3595375)
chr2 (228-312)||(3595852-3595936)
chr2 (228-312)||(9224311-9224395)
chr2 (228-312)||(10883332-10883416)
chr2 (228-312)||(11256697-11256781)
chr2 (228-312)||(16571163-16571247)
chr2 (228-312)||(20244128-20244212)
chr2 (228-312)||(28223833-28223917)
chr2 (229-312)||(7583751-7583834)
chr2 (228-309)||(7583180-7583261)
chr2 (228-312)||(4386917-4387001)
chr2 (228-312)||(8113257-8113341)
chr2 (228-312)||(28224345-28224429)
chr2 (228-311)||(16887629-16887712)
chr2 (230-312)||(6849333-6849415)
chr2 (228-306)||(17918642-17918720)
chr2 (232-312)||(467150-467230)
chr2 (228-312)||(6849499-6849583)
chr2 (228-312)||(20243598-20243682)
chr2 (237-312)||(7716716-7716791)
chr2 (229-306)||(7717243-7717320)
chr2 (228-305)||(39476567-39476644)
chr2 (228-312)||(8963549-8963633)
chr2 (228-312)||(30161978-30162062)
chr2 (228-308)||(33847922-33848002)
chr2 (230-312)||(17918066-17918148)
chr2 (228-309)||(16571683-16571764)
chr2 (228-312)||(16903047-16903130)
chr2 (228-312)||(8112725-8112806)
chr2 (230-312)||(467300-467382)
chr2 (251-312)||(40165918-40165979)
chr2 (228-309)||(40166806-40166881)
chr2 (228-270)||(12207353-12207395)
[»] chr1 (33 HSPs)
chr1 (228-312)||(49533788-49533872)
chr1 (228-312)||(27816961-27817045)
chr1 (228-312)||(41563749-41563833)
chr1 (228-312)||(48843919-48844003)
chr1 (228-309)||(51247876-51247957)
chr1 (228-312)||(42839505-42839589)
chr1 (228-312)||(43368792-43368876)
chr1 (228-312)||(48369527-48369611)
chr1 (230-312)||(1403085-1403167)
chr1 (228-310)||(27797164-27797246)
chr1 (228-305)||(6287672-6287749)
chr1 (228-309)||(7219605-7219686)
chr1 (228-312)||(6288161-6288245)
chr1 (228-312)||(7219053-7219137)
chr1 (228-312)||(27797693-27797777)
chr1 (228-312)||(37725424-37725508)
chr1 (228-312)||(42838982-42839066)
chr1 (228-312)||(51248440-51248524)
chr1 (230-312)||(41563224-41563306)
chr1 (233-306)||(1403650-1403723)
chr1 (229-306)||(8560701-8560778)
chr1 (230-310)||(8560203-8560283)
chr1 (228-312)||(27934252-27934335)
chr1 (228-312)||(42840270-42840354)
chr1 (228-312)||(49534353-49534437)
chr1 (236-312)||(52859753-52859829)
chr1 (228-306)||(43368241-43368319)
chr1 (234-312)||(48843625-48843703)
chr1 (228-312)||(52859194-52859278)
chr1 (233-312)||(7782653-7782732)
chr1 (228-312)||(42839746-42839829)
chr1 (273-309)||(37725672-37725708)
chr1 (247-296)||(48834427-48834476)
[»] chr6 (15 HSPs)
chr6 (228-312)||(5523245-5523329)
chr6 (228-312)||(6032710-6032794)
chr6 (228-312)||(12809659-12809743)
chr6 (228-312)||(30611302-30611386)
chr6 (228-309)||(30610759-30610840)
chr6 (228-312)||(5523803-5523887)
chr6 (228-312)||(6032203-6032287)
chr6 (228-312)||(33668266-33668350)
chr6 (228-312)||(12809114-12809198)
chr6 (228-312)||(13944335-13944419)
chr6 (228-309)||(31723881-31723962)
chr6 (228-312)||(13936597-13936681)
chr6 (228-312)||(33668788-33668871)
chr6 (228-312)||(31724405-31724490)
chr6 (228-309)||(33648120-33648201)
[»] scaffold0229 (1 HSPs)
scaffold0229 (230-312)||(15192-15274)
[»] scaffold1095 (1 HSPs)
scaffold1095 (228-312)||(1530-1614)
[»] scaffold0368 (1 HSPs)
scaffold0368 (228-312)||(11742-11825)
[»] scaffold0041 (1 HSPs)
scaffold0041 (228-297)||(27281-27350)


Alignment Details
Target: scaffold0007 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 11394 - 11310
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11394 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 11310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 33114145 - 33114229
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33114145 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 33114229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 40309457 - 40309541
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40309457 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 40309541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 44062114 - 44062030
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44062114 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 44062030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 4374258 - 4374342
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4374258 ggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 4374342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 7818603 - 7818519
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7818603 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactt 7818519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 10806077 - 10805993
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10806077 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaactt 10805993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 11998585 - 11998501
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11998585 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 11998501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 11999037 - 11999121
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11999037 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttcatctaatcattgaatccaactt 11999121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 16889785 - 16889869
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16889785 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactt 16889869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 30115496 - 30115412
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30115496 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 30115412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 38778283 - 38778199
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38778283 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 38778199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 43481238 - 43481322
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43481238 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactt 43481322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 2209135 - 2209051
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  2209135 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatcgaactt 2209051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 16889324 - 16889240
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16889324 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactt 16889240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 16880017 - 16879933
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16880017 ggaagatagtgtgaagaaaaatcaaatattgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 16879933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 30115953 - 30116037
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  30115953 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatattctttacttaatctaatcattgaatccaactt 30116037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 33113704 - 33113620
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  33113704 ggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactt 33113620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 39852283 - 39852199
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39852283 ggaagatagtgtgaaaaaaaatctagtgttgagggagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactt 39852199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 39852760 - 39852844
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  39852760 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaataattgaatctaactt 39852844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 43591136 - 43591052
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  43591136 ggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaactt 43591052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 44062553 - 44062637
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  44062553 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaataatatattctccacttaatctaatcattgaatccaactt 44062637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 43480740 - 43480661
Alignment:
Q  233 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43480740 atagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactt 43480661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 7819060 - 7819138
Alignment:
Q  234 tagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  7819060 tagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactt 7819138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 4374949 - 4375033
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  4374949 ggaagatagtgtaaagaaaaatctagtgttgaaagagcatgttaaaaatatgttcttcacttaatccaatcattgaatccaactt 4375033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 16880487 - 16880559
Alignment:
Q  240 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16880487 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactt 16880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 38778752 - 38778836
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  38778752 ggaagatagtgtgaagaaaaatctagtgttgagagagtatgttaaaaatatattcttcacttaatctaatcattgaatacaactt 38778836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 43591573 - 43591657
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  43591573 ggaagatattgtgaagaaaaatctagtgttaagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactt 43591657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 35237386 - 35237304
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35237386 aagatagtgtgaagaaaaatttagtattgaaagagcatgttaagaatatgttattcacttaatctaatcattgaatccaactt 35237304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 10806394 - 10806478
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  10806394 ggaagatagtgtgaagaaaaatctagttttaagagagcatgttaagaatatgttctttacttaatttaatcattgaatcaaactt 10806478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 36848158 - 36848238
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| |||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36848158 ggaaaatagtgtgaagaaaaatctagtgttgaga----atgttaagaatatgttcttcacttaatctaatcattgaatccaactt 36848238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 4373809 - 4373731
Alignment:
Q  234 tagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  4373809 tagtgtgaagaaaaatctagtgttgcgagaacatgttaagaatatgttcttcacttaatataatcattgaattcaactt 4373731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 40907723 - 40907649
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    |||||||||||| |||||||| |||||||   ||| ||||||||||||||||||||||||||||||||||||||||||    
T  40907723 gaagatagtgtggagaaaaatttagtgtt---agaacatgttaagaatatgttcttcacttaatctaatcattgaatc 40907649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 35237833 - 35237899
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||| ||           |||||||||||||||||||||||||| ||||||||    
T  35237833 gaagatagtgtgaagaaaaatctagtgttaag-----------agaatatgttcttcacttaatctaattattgaatc 35237899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 36682964 - 36682880
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36682964 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 36682880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 47814100 - 47814016
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47814100 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 47814016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 4895039 - 4895123
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4895039 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactt 4895123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 32499378 - 32499294
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32499378 ggaagatagtgtgatgaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 32499294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 36683421 - 36683505
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36683421 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactt 36683505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 47814592 - 47814676
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47814592 ggaaaatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 47814676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 24044000 - 24044077
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24044000 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 24044077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 42456050 - 42455969
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42456050 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaa 42455969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 4894628 - 4894544
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4894628 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaattcaactt 4894544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 32499830 - 32499913
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32499830 ggaagatagtgtgaa-aaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 32499913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 34853520 - 34853436
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34853520 ggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactt 34853436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 46732696 - 46732612
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  46732696 ggaagatagtgtgaagaaaaatctagtgttgagagagaatgttaagaatatgttattcacttaatctaatcattgaatccaactt 46732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 30711916 - 30711833
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30711916 gaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactt 30711833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 18520984 - 18520902
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520984 aagatagtgtgaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 18520902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 19816391 - 19816309
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  19816391 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttttacacttaatctaatcattgaatccaactt 19816309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 27855694 - 27855616
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27855694 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatc 27855616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 22275552 - 22275475
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22275552 gaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatc 22275475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 19816849 - 19816933
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  19816849 ggaatatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcatttaatccaactt 19816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 33806098 - 33806014
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33806098 ggaagatagtgcgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaactt 33806014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 34853953 - 34854037
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  34853953 ggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactt 34854037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 46815019 - 46815103
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46815019 ggaagatagtgttaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaactt 46815103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 36620697 - 36620780
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaact 311  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36620697 ggaagatagtgtaaagaaaaatctagtgttgagtgagcatgttaataatatgttcttcacttaatctaatcattgaatccaact 36620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 22276035 - 22276117
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  22276035 aagatagtgtgaagaaaaatctagtgttgaaagagcatgttaaaaatatgttcttcatttaatctaatcattgaatccaactt 22276117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 42456473 - 42456557
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  42456473 ggaagatagtgtgaagaaaaatcttgtgttgagagaacatgttaaaaatatgttcttcacttaatgtaatcattgaatccaactt 42456557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 46814534 - 46814450
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  46814534 ggaagatagtgtgaagaaaaatctaatgttgaaagagcatgttaagaatatgttcttcacttaatctaatcgttgaattcaactt 46814450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 24323939 - 24324020
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  24323939 ggaagatagtgagaagaaaaatctagtgttcagagaacatgttaagaatatgttcttcacttaatctaattattgaatccaa 24324020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 230 - 309
Target Start/End: Original strand, 46012899 - 46012978
Alignment:
Q  230 aagatagtgtgaagaaaaa-tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46012899 aagatagtgtgaagaaaaaatctagtgttgagagagcatgttaa-aatatgttcttcacttaatctaatcattgaatccaa 46012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 36620247 - 36620163
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||| |||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  36620247 ggaagatattgtgaaaaaaaatctagtgttgaaagagcatgttaataatatgtttttcacttaatttaatcattgaattcaactt 36620163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 27856106 - 27856165
Alignment:
Q  234 tagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatc 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27856106 tagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatc 27856165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 29060118 - 29060073
Alignment:
Q  247 aatctagtgttgagagagcatgttaagaatatgttcttcacttaat 292  Q
    |||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  29060118 aatctagtgttgagagtgcatgataataatatgttctttacttaat 29060073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 42408522 - 42408606
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42408522 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 42408606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 3739620 - 3739704
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3739620 ggaaaatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 3739704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 33430171 - 33430087
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430171 ggaagatagtgcgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 33430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 3957629 - 3957545
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3957629 ggaagatagtgtgaagaaaaatctagtgttgagagaacatattaagaatatgttcttcacttaatctaatcattgaatccaactt 3957545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 4929000 - 4928916
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4929000 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattaaatccaactt 4928916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 26687629 - 26687545
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26687629 ggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactt 26687545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 26957360 - 26957276
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26957360 ggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactt 26957276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 28075926 - 28076010
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  28075926 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatatttttcacttaatctaatcattgaatccaactt 28076010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 5324366 - 5324444
Alignment:
Q  234 tagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5324366 tagtgtgaagaaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 5324444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 8813640 - 8813724
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8813640 ggaagatagtgtgaagacaaatctagtgtagagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactt 8813724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 4929464 - 4929547
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  4929464 gaagatagtgcgaagaaaaatctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactt 4929547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 3739129 - 3739045
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  3739129 ggaagatattgtgaagaaaaatctagtgttgagagagtatgttaagaatatatttttcacttaatctaatcattgaatccaactt 3739045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 26688013 - 26688092
Alignment:
Q  228 ggaagatagtgtgaagaaaa-atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26688013 ggaagatagtgtgaagaaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatc 26688092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 26957744 - 26957823
Alignment:
Q  228 ggaagatagtgtgaagaaaa-atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26957744 ggaagatagtgtgaagaaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatc 26957823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 21770127 - 21770045
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 310  Q
    |||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21770127 ggaatatagtgtgaagaaaaatttaatgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 21770045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 3958091 - 3958175
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||||    
T  3958091 ggaagatagtgtgaagaaaaatttagtgttgagagagtatgttaaaaatatgttcttcacttaatctaattattgaatcaaactt 3958175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 13738188 - 13738105
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  13738188 ggaagatagtgtgaagaaaaatctagtgttgaaaga-catgtaaagaatatgttcttcacttaatccaatcattgaatccaactt 13738105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 230 - 309
Target Start/End: Complemental strand, 42408119 - 42408040
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||| |||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  42408119 aagatagtttgaagaaaaatctaatattgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaa 42408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 8813184 - 8813134
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatat 278  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8813184 ggaagatagtgtgaagaaaaatatagtgttgagagaacatgttaagaatat 8813134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 12707096 - 12707058
Alignment:
Q  254 tgttgagagagcatgttaagaatatgttcttcacttaat 292  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  12707096 tgttgagagagcatgttaagaatatattcttcatttaat 12707058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 20075654 - 20075570
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20075654 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 20075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 31876917 - 31876833
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31876917 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 31876833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 32291142 - 32291060
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32291142 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 32291060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 2713800 - 2713884
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2713800 ggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 2713884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 12640094 - 12640010
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12640094 ggaagacagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 12640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 20076143 - 20076227
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20076143 ggaagatagtgtgaagaaaaatctagagttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 20076227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 20422688 - 20422772
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20422688 ggaatatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 20422772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 25369912 - 25369828
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25369912 ggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 25369828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 25370349 - 25370433
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25370349 ggaagatagtgtgaagaaaaatctagttttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 25370433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 26424361 - 26424445
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26424361 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 26424445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 28223692 - 28223608
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28223692 ggaagatagtgtgaagaaaaatctagtgttgagagagcgtgttaagaatatgttcttcacttaatctaatcattgaatccaactt 28223608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 36944739 - 36944655
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36944739 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 36944655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 36945180 - 36945264
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36945180 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 36945264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 37567431 - 37567515
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37567431 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactt 37567515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 48091056 - 48091136
Alignment:
Q  232 gatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48091056 gatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 48091136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 52597668 - 52597752
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  52597668 ggaagatagtgtgaagaaaaatctagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactt 52597752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 199128 - 199051
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  199128 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 199051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 388882 - 388798
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  388882 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaactt 388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 389362 - 389446
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  389362 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcactgaatccaactt 389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 32901980 - 32901896
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32901980 ggaagatagtgtgaagaaaaatctagtgttgagaaagcatgttaagaatatgttctttacttaatctaatcattgaatccaactt 32901896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 32902422 - 32902506
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32902422 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactt 32902506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 48782031 - 48782115
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  48782031 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactt 48782115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 52597619 - 52597535
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  52597619 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactt 52597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 55815954 - 55815870
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55815954 ggaagatagtgtgaagaaaaatctagtgttaagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactt 55815870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 55816407 - 55816491
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55816407 ggaagatagtgtgaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 55816491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 29809044 - 29809128
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29809044 ggaaaatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactt 29809128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 33569849 - 33569765
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  33569849 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttgagaatatgttcttcacttaatctaattattgaatccaactt 33569765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 35427373 - 35427293
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35427373 gaagatagtgtgaagaaaaatctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 35427293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 37567030 - 37566954
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37567030 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatc 37566954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 36111174 - 36111255
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36111174 ggaagatagtgtgaagaaaaatctagtgtttagagaatatgttaagaatatgttcttcacttaatctaatcattgaatccaa 36111255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 31842680 - 31842760
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 308  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  31842680 ggaagatagtgtgaagaaaaatccagtgttgagagaacatgttaataatatgttcttcacttaatctaatcattgaatcca 31842760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 40344632 - 40344548
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  40344632 ggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatctaataatttaatccaactt 40344548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 40345087 - 40345171
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  40345087 ggaagatagtgtgaagaaaaatctagtgttgagagaccatattaaaaatatgttcttcacttaatctaatcattgaatctaactt 40345171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 40848089 - 40848171
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  40848089 aagatagtgtgaagaaaaattcagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatcaaactt 40848171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 12640543 - 12640627
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  12640543 ggaaaatagtgtgaagaaaaatttagtgttgagagaacatgttaaaaatatgttcttcgcttaatctaatcattgaatccaactt 12640627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 31877389 - 31877473
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  31877389 ggaaaatagtgtgaagaaaaatctagtgttgagataacatgttaaaaatatgttcttcacttaatctaatcattaaatccaactt 31877473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 48781611 - 48781527
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  48781611 ggaagatagtgtgaagaaaaatttagtgttgaaaaagcatgttaagaatatattcatcacttaatctaatcattgaatccaactt 48781527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 3708900 - 3708818
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  3708900 aagatagtgtgaagaaaaatctagtgctgagagaacatgataagagtatgttctttacttaatctaatcattgaatccaactt 3708818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 20422257 - 20422182
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  20422257 ggaagatagtgcgaagaaaaatctagtgttgagagagcatgttaagaatatg---ttcacttaatctaatcattgaatc 20422182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 6862774 - 6862692
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||| || ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6862774 aagatagcgtaaagaaaaatttagtgttgaaagtgcatgttaagaatatgttcttcacttaatctaatctttgaatccaactt 6862692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 199216 - 199267
Alignment:
Q  261 agagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  199216 agagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 199267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 40847771 - 40847722
Alignment:
Q  263 agcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40847771 agcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 40847722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 26423877 - 26423804
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||    
T  26423877 ggaagatagtgtgaagaaaaatctagtgttgagaga-----------atatgttcttcacttaatctaatcattgaatccaactt 26423804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 35427839 - 35427882
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgtta 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35427839 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgtta 35427882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 48090551 - 48090511
Alignment:
Q  272 agaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactt 48090511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 47328397 - 47328437
Alignment:
Q  272 agaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaactt 47328437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 43079272 - 43079220
Alignment:
Q  245 aaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 297  Q
    ||||| |||||||||||| ||||| ||||| ||||||||| |||| |||||||    
T  43079272 aaaatatagtgttgagagtgcatgataagactatgttctttacttgatctaat 43079220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 47321836 - 47321804
Alignment:
Q  280 ttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| ||||||||||    
T  47321836 ttcttcacttaatctaatcattaaatccaactt 47321804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 3945024 - 3944940
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3945024 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 3944940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 37374944 - 37374860
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37374944 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 37374860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 42356364 - 42356281
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42356364 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 42356281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 23584840 - 23584924
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23584840 ggaaggtagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 23584924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 23599663 - 23599747
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23599663 ggaaggtagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 23599747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 29342950 - 29343034
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29342950 ggaagatagtgtgcagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 29343034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 41875573 - 41875657
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41875573 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaacccaactt 41875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 44868136 - 44868052
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44868136 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactt 44868052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 48218720 - 48218636
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48218720 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatccaactt 48218636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 49752402 - 49752318
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49752402 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcctactt 49752318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 50687665 - 50687749
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50687665 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactt 50687749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 19555880 - 19555959
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19555880 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcc 19555959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 47737630 - 47737712
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 310  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47737630 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaac 47737712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 55281964 - 55281883
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55281964 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaa 55281883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 8427700 - 8427784
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8427700 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatctaactt 8427784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 25025303 - 25025219
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25025303 ggaagatagtgtgaaaaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactt 25025219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 29342470 - 29342386
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29342470 ggaagatagtgtgaagaaaaatctagtgtggagggagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 29342386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 31014466 - 31014382
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31014466 ggaagatagtgtgaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 31014382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 31014881 - 31014965
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31014881 ggaagatagtgtgaagaaaaatttagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactt 31014965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 32672295 - 32672211
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  32672295 ggaagatagtgtgaagaaaaatctagtgttgagagagcatattaagaatatgttcttcacttaatctaatcattaaatccaactt 32672211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 32672740 - 32672824
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  32672740 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcgcttaatctaatcattaaatccaactt 32672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 37374563 - 37374647
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  37374563 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactt 37374647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 38575599 - 38575683
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38575599 ggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaactt 38575683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 49752867 - 49752951
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  49752867 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactt 49752951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 40887903 - 40887981
Alignment:
Q  233 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaact 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40887903 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatacaact 40887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 44868575 - 44868653
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44868575 ggaagatagtgttaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 44868653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 19555399 - 19555315
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19555399 ggaatatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactt 19555315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 24220703 - 24220627
Alignment:
Q  233 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24220703 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgaatccaa 24220627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 25025721 - 25025805
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  25025721 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttctcttaatctaatcattgaatcaaactt 25025805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 37374094 - 37374010
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  37374094 ggaagatagtgtgaagaaaaatctagtgttgagaaaacatgttaagaatatgttcttcacttaatttaatcattgaatccaactt 37374010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 37375425 - 37375509
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  37375425 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaagatgttcttcacttaatctaatcatcgaatccaactt 37375509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 50675082 - 50675166
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  50675082 ggaagatagtgtgaagaaaaatctagtgttgagagtgcatgttaataatatgttcttcacttaatctaatcattgaattcaactt 50675166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 38575148 - 38575066
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  38575148 aagatagtttgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaactt 38575066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 43658854 - 43658936
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43658854 aagatagtgtgaagaaaaatctaatgttgaaagagcctgttaagaatatgttcttcacttaatctaatcattgaatccaactt 43658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 48219192 - 48219273
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  48219192 ggaagatagtgtgaagaaaagtctagtgttgagagagcatgttaagaatatattcatcacttaatctaatcattgaatccaa 48219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 8427345 - 8427269
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaa 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  8427345 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcatttaatctaatcattgaa 8427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 23584365 - 23584282
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  23584365 gaagatagtgtgaagaaaaatctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactt 23584282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 23599188 - 23599105
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  23599188 gaagatagtgtgaagaaaaatctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactt 23599105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 24221130 - 24221213
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  24221130 gaagatagtttgaagaaaaatctagtgttgagagagcatgttaagaatgtgttcttcacttaatataatcattaaatccaactt 24221213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 47737192 - 47737108
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  47737192 ggaagatagtgcgaagaaaaatctagtattgagagaacatgttaagaatatgttctccacttaatctaatcgttgaatccaactt 47737108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 55282390 - 55282462
Alignment:
Q  240 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55282390 gaagaaaaatctagtgtcgagggagcatgttaagaatatgttcttcacttaatctaatcattaaatccaactt 55282462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 43104025 - 43103944
Alignment:
Q  231 agatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  43104025 agatagtgtgaagaaaaatatagtattgaaagagcatgttaagaatatgttattcacttaatccaatcgttgaatccaactt 43103944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 50674753 - 50674684
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  50674753 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgctaaaaatatgttctacacttaatctaat 50674684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 3945466 - 3945527
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcactt 289  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  3945466 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcactt 3945527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 42356766 - 42356843
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 305  Q
    ||||||||||||||||||||||||||||||||||||| ||| || |||||| || |||| ||||||||||||||||||    
T  42356766 ggaagatagtgtgaagaaaaatctagtgttgagagagaatgctaggaatatattattcatttaatctaatcattgaat 42356843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 43658363 - 43658332
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgag 260  Q
    ||||||||||||||||||||||||||||||||    
T  43658363 gaagatagtgtgaagaaaaatctagtgttgag 43658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 50687214 - 50687185
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgtt 257  Q
    ||||||||||||||||||||||||||||||    
T  50687214 ggaagatagtgtgaagaaaaatctagtgtt 50687185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 11256245 - 11256161
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11256245 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 11256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 39477282 - 39477366
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39477282 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 39477366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 3595375 - 3595291
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3595375 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcactttatctaatcattgaatccaactt 3595291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 3595852 - 3595936
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3595852 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaactt 3595936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 9224395 - 9224311
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224395 ggaagataatgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 9224311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 10883416 - 10883332
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10883416 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactt 10883332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 11256697 - 11256781
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11256697 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaactt 11256781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 16571247 - 16571163
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16571247 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaactt 16571163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 20244128 - 20244212
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20244128 ggaagatagtgtgaagaaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 20244212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 28223917 - 28223833
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28223917 ggaagatagtgtgacgaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 28223833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 7583751 - 7583834
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7583751 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaagctaatcattgaatccaactt 7583834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 7583261 - 7583180
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7583261 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacctaatctaatcattgaatccaa 7583180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 4386917 - 4387001
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4386917 ggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 4387001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 8113257 - 8113341
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8113257 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacataatctaatcatcgaatccaactt 8113341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 28224345 - 28224429
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28224345 ggaagatagtgtgaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 28224429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 16887712 - 16887629
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaact 311  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16887712 ggaagatagtgtgaagaaaaatctagtgttcagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaact 16887629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 6849415 - 6849333
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  6849415 aagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactt 6849333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 17918642 - 17918720
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17918642 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatc 17918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 467230 - 467150
Alignment:
Q  232 gatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  467230 gatagtgtgaagaaaaatctagtgttgagagaccatgttaagaatatgttcttcacttaatttaatcattgaatccaactt 467150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 6849499 - 6849583
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6849499 ggaaaatagtgtgaagaaaaatctagtgttaagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactt 6849583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 20243682 - 20243598
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  20243682 ggaagatagtgtgaagaaaaatctaatgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactt 20243598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 7716791 - 7716716
Alignment:
Q  237 tgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7716791 tgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 7716716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 7717243 - 7717320
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  7717243 gaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatataatcattgaatc 7717320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 39476644 - 39476567
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 305  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  39476644 ggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatattcttcacttaatctaatcattgaat 39476567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 8963633 - 8963549
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  8963633 ggaagataatgtaaagaaaaatctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaactt 8963549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 30162062 - 30161978
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30162062 ggaagataatgtgaagaaaaatctaatgttgaaagagtatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 30161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 33848002 - 33847922
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 308  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  33848002 ggaagatagtgtgaagaaaaatatagtgttgagagagcatgttaagaatatgttcttcacttaatctaattgttgaatcca 33847922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 17918148 - 17918066
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  17918148 aagatagtgtgaataaaaatctagtgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatctaactt 17918066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 16571683 - 16571764
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16571683 ggaaggtagtgttaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttgatctaatcattgaatccaa 16571764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 16903047 - 16903130
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16903047 ggaagatagtgtgaagaaaa-tctagtgttgaaagagcatgttaaaaatatgttattcacttaatctaatcattgaatccaactt 16903130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 8112806 - 8112725
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||   ||||||||||||||||||||||||||||||    
T  8112806 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatg---ttcacttaatctaatcattgaatccaactt 8112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 467300 - 467382
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  467300 aagatagtttgaagaaaaatctaatattgagagaacatgttaagaatatgttcttcacttaatttaattattgaattcaactt 467382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 40165979 - 40165918
Alignment:
Q  251 tagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40165979 tagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaactt 40165918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 40166806 - 40166881
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||||||||||||| |||||||||||||||      |||||||| ||||||||||| ||||||||||||||||||||||||    
T  40166806 ggaagatagtgtgaaaaaaaatctagtgttg------catgttaaaaatatgttcttgacttaatctaatcattgaatccaa 40166881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 12207353 - 12207395
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgtt 270  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||    
T  12207353 ggaagataatgtgaagaaaaatctagtgttgaaagaacatgtt 12207395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 49533872 - 49533788
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49533872 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 49533788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 27816961 - 27817045
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27816961 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaggaatatgttcttcacttaatctaatcattgaatccaactt 27817045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 41563749 - 41563833
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41563749 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 48843919 - 48844003
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48843919 ggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 48844003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 51247957 - 51247876
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51247957 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaa 51247876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 42839505 - 42839589
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42839505 ggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactt 42839589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 43368792 - 43368876
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43368792 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatacaactt 43368876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 48369611 - 48369527
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48369611 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaactt 48369527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 1403167 - 1403085
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1403167 aagatagtgtgaagaaaaatctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 1403085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 27797246 - 27797164
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27797246 ggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaac 27797164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 6287749 - 6287672
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaat 305  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6287749 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat 6287672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 7219605 - 7219686
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7219605 ggaagatagtgtgaagaaaaatctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 7219686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 6288161 - 6288245
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6288161 ggaagatagtgggaagaaaaatttagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 6288245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 7219137 - 7219053
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  7219137 ggaagatagtgtgaagaaaaatctagtgttgagaaagcatgttaagaatatattcttcatttaatctaatcattgaatccaactt 7219053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 27797693 - 27797777
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  27797693 ggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactt 27797777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 37725508 - 37725424
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  37725508 ggaaaatagtgtgaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaatgattgaatccaactt 37725424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 42839066 - 42838982
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  42839066 ggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactt 42838982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 51248440 - 51248524
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  51248440 ggaagatagtgtgaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaattattgaatcaaactt 51248524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 41563306 - 41563224
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  41563306 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatacgttcttcatttaatctaataattgaatccaactt 41563224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 1403650 - 1403723
Alignment:
Q  233 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1403650 atagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatc 1403723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 8560701 - 8560778
Alignment:
Q  229 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  8560701 gaagatagtgtgaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatc 8560778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 310
Target Start/End: Complemental strand, 8560283 - 8560203
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 310  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8560283 aagatagtatgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatctttgaatccaac 8560203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 27934252 - 27934335
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  27934252 ggaagatagtgcgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttctcttaatctaatcattg-atccaactt 27934335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 42840270 - 42840354
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  42840270 ggaagatagtgtgaagaaaaatctagtgttgagagattatgttaaaaatatgttcttcacttaatctaatcattgaattcaactt 42840354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 49534353 - 49534437
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  49534353 ggaagatagtgtgaagaaaaacctagtgttgagagagcatgataagaatatgtttttaacttaatctaatcattgaatccaactt 49534437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 52859753 - 52859829
Alignment:
Q  236 gtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52859753 gtgtgaagaaaaatctggtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactt 52859829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 43368319 - 43368241
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatc 306  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  43368319 ggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatttaatcattgaatc 43368241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 48843703 - 48843625
Alignment:
Q  234 tagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  48843703 tagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttattcacttaatataatcattgaatccaactt 48843625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 52859278 - 52859194
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||| |||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  52859278 ggaagatagtgtaaagaaaaatctaatgatgagagagcatgttaagaatatgttattcatttaatctaatcattgaatctaactt 52859194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 7782653 - 7782732
Alignment:
Q  233 atagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  7782653 atagtgtgaagaaaaatctaatgttgaaagagcatgataagaatatgttcttcacttgatccaatcattgaatccaactt 7782732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 42839829 - 42839746
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  42839829 ggaagatattgtgaa-aaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactt 42839746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 37725672 - 37725708
Alignment:
Q  273 gaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||| ||||||||||||||||||||||||||||||    
T  37725672 gaatatattcttcacttaatctaatcattgaatccaa 37725708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 48834476 - 48834427
Alignment:
Q  247 aatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaa 296  Q
    ||||||||||| |||| ||||| ||| ||||||||||| |||||||||||    
T  48834476 aatctagtgttcagagtgcatgataataatatgttctttacttaatctaa 48834427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 5523329 - 5523245
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5523329 ggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 5523245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 6032710 - 6032794
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6032710 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactt 6032794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 12809659 - 12809743
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12809659 ggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 12809743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 30611302 - 30611386
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30611302 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcagttaatctaatcattgaatccaactt 30611386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 30610840 - 30610759
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30610840 ggaagatagtgtcaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 30610759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 5523803 - 5523887
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5523803 ggaagatagtgtgaagaaaaatctagtcttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactt 5523887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 6032287 - 6032203
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6032287 ggaagatagtgtgaagaaaaatctagtcttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 6032203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 33668350 - 33668266
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  33668350 ggaagatagtgtgaagaaaaatctagtgttgagagagcatattaagaatatgttcttcacttaatttaatcattgaatccaactt 33668266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 12809198 - 12809114
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||    
T  12809198 ggaagatagtgtgaagaaaaatctagtgttgagagaacttgttaagaatatgttcttcacttaatctaatcattgcatccaactt 12809114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 13944419 - 13944335
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  13944419 ggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaactt 13944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 31723962 - 31723881
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31723962 ggaagatagtgtgaagaaaattctagtgctgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaa 31723881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 13936597 - 13936681
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  13936597 ggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgactctaactt 13936681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 33668788 - 33668871
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  33668788 ggaagatagtgtgaagaaaaatctagtgttgagaaa-catgttaaaaatatattcttcacttaatctaatcattgaatccaactt 33668871  T

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Target: chr6; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 31724405 - 31724490
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatc-taatcattgaatccaactt 312  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  31724405 ggaagatagtgtgaagaaaaatcttgtgttgaaagagcatgttaagaatatattcttcacttaatcaaaatcattgaatccaactt 31724490  T

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Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 33648120 - 33648201
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 309  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||  |||||||||||||||    
T  33648120 ggaagatagtgtgaagaaaaatctagtgttgaaagaacacgttaagaatatattcttcacttaattcaatcattgaatccaa 33648201  T

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Target: scaffold0229 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 15192 - 15274
Alignment:
Q  230 aagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15192 aagatagtgtgaagaaaaatctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 15274  T

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Target: scaffold1095 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 1614 - 1530
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  1614 ggaaaatagtgtgaagaaaaatctagtgttgagagagcatgctaagaatatgttattcacttaatctaatcattgaatccaactt 1530  T

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Target: scaffold0368 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 11742 - 11825
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 312  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  11742 ggaagatattgtgaa-aaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactt 11825  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 27350 - 27281
Alignment:
Q  228 ggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 297  Q
    |||||||||||| || || ||| |||||||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  27350 ggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtgttcctcatttaatctaat 27281  T

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