View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0964_low_62 (Length: 216)
Name: NF0964_low_62
Description: NF0964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0964_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8012232 - 8012395
Alignment:
| Q |
1 |
ttcattatgcatctatggataccatatactttgaatgtaaattcattattaagccatggattatctttgtcattaaatttttattttatatgttttgatt |
100 |
Q |
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| T |
8012232 |
ttcattatgcatctatggataccatatactttgaatgtaaattcattattaagccatggattatctttgtcattaaatttttattttatttgttttgatt |
8012331 |
T |
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| Q |
101 |
atgcttccaccattgtcattattttcatgtgttttgattattgagggagaagaataatatcaag |
164 |
Q |
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| T |
8012332 |
atgcttccaccattgtcattattttcatgtgttttgattattgagggagaagaataatatcaag |
8012395 |
T |
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