View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0971_low_5 (Length: 384)

Name: NF0971_low_5
Description: NF0971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0971_low_5
NF0971_low_5
[»] chr8 (2 HSPs)
chr8 (128-384)||(14995214-14995470)
chr8 (98-134)||(22732207-22732243)
[»] chr4 (15 HSPs)
chr4 (128-384)||(41860607-41860863)
chr4 (128-384)||(52681467-52681723)
chr4 (261-382)||(30576567-30576688)
chr4 (131-285)||(15056967-15057124)
chr4 (264-310)||(47964110-47964156)
chr4 (292-384)||(14991327-14991419)
chr4 (98-134)||(41861939-41861975)
chr4 (98-134)||(41862030-41862066)
chr4 (98-134)||(41862121-41862157)
chr4 (98-134)||(41862212-41862248)
chr4 (98-134)||(41862403-41862439)
chr4 (98-134)||(41946638-41946674)
chr4 (98-134)||(41946729-41946765)
chr4 (98-134)||(52680359-52680395)
chr4 (98-134)||(53285696-53285732)
[»] chr3 (15 HSPs)
chr3 (128-382)||(26950254-26950508)
chr3 (128-384)||(36092537-36092793)
chr3 (128-384)||(18200483-18200739)
chr3 (266-352)||(12807577-12807663)
chr3 (272-359)||(14458470-14458557)
chr3 (98-134)||(854976-855012)
chr3 (98-134)||(6953291-6953327)
chr3 (98-134)||(6953430-6953466)
chr3 (98-134)||(6953812-6953848)
chr3 (98-134)||(18199352-18199388)
chr3 (98-134)||(36093873-36093909)
chr3 (98-134)||(36093964-36094000)
chr3 (98-134)||(36947725-36947761)
chr3 (98-134)||(36947864-36947900)
chr3 (98-134)||(36948003-36948039)
[»] chr7 (11 HSPs)
chr7 (128-384)||(22005714-22005970)
chr7 (128-384)||(7892490-7892746)
chr7 (127-384)||(3598984-3599241)
chr7 (266-384)||(13604145-13604262)
chr7 (98-134)||(3600149-3600185)
chr7 (98-134)||(5090967-5091003)
chr7 (98-134)||(7891382-7891418)
chr7 (98-134)||(13927440-13927476)
chr7 (98-134)||(22004323-22004359)
chr7 (98-134)||(22004514-22004550)
chr7 (98-134)||(22004605-22004641)
[»] chr5 (7 HSPs)
chr5 (128-384)||(32674006-32674262)
chr5 (128-324)||(22636691-22636891)
chr5 (266-359)||(21122329-21122422)
chr5 (98-134)||(20844506-20844542)
chr5 (98-134)||(23179540-23179576)
chr5 (98-134)||(23179631-23179667)
chr5 (98-134)||(32672891-32672927)
[»] chr2 (9 HSPs)
chr2 (128-384)||(13906996-13907252)
chr2 (128-384)||(26454641-26454897)
chr2 (128-384)||(40604478-40604734)
chr2 (98-134)||(32287325-32287361)
chr2 (98-134)||(13899908-13899944)
chr2 (98-134)||(13905806-13905842)
chr2 (98-134)||(26453534-26453570)
chr2 (98-134)||(35433139-35433175)
chr2 (98-134)||(40603369-40603405)
[»] chr6 (1 HSPs)
chr6 (128-384)||(3590335-3590591)
[»] chr1 (7 HSPs)
chr1 (128-384)||(35595684-35595940)
chr1 (128-384)||(2045983-2046239)
chr1 (98-134)||(2051974-2052010)
chr1 (98-134)||(39514207-39514243)
chr1 (98-134)||(45507254-45507290)
chr1 (98-134)||(45507403-45507439)
chr1 (98-134)||(49791612-49791648)
[»] scaffold0121 (3 HSPs)
scaffold0121 (98-134)||(41422-41458)
scaffold0121 (98-134)||(41240-41276)
scaffold0121 (98-134)||(41331-41367)
[»] scaffold0160 (1 HSPs)
scaffold0160 (98-134)||(36132-36168)


Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 128 - 384
Target Start/End: Complemental strand, 14995470 - 14995214
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14995470 tcctcctcttttttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 14995371  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14995370 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 14995271  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14995270 ttgtttagtttgatttttggttatttgtaatccgatgactgtttgaattgcattgct 14995214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 22732243 - 22732207
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  22732243 caaaccctaaccatgatttcctaatttcactcctcct 22732207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 128 - 384
Target Start/End: Complemental strand, 41860863 - 41860607
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860863 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 41860764  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860763 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 41860664  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860663 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 41860607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 52681467 - 52681723
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52681467 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaacagctttttaggcttcttac 52681566  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  52681567 aaaatcaaagtaattgttatataattggtgtggggtttagtttgttgattttgcaattcaggaattttcaaattcggggttgaaataagagtatgagcat 52681666  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52681667 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattggattgct 52681723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 382
Target Start/End: Complemental strand, 30576688 - 30576567
Alignment:
Q  261 ggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcatttgtttagtttgatttttggttatttgtaatcc 360  Q
    ||||||||||||| ||||||||||  || ||||| |||| | | |||||||||||||| | |||| |||||||| || ||||||| |||||||||||| |    
T  30576688 ggtttggtttgttcattttgcagtagagaaatttccaaaatggcggttggaataagagcaagagcttttgtttaattggattttttgttatttgtaattc 30576589  T
Q  361 gatgactttttgaattgcattg 382  Q
    || || |||||||||| |||||    
T  30576588 gacgagtttttgaatttcattg 30576567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 285
Target Start/End: Original strand, 15056967 - 15057124
Alignment:
Q  131 tcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttacaaa 230  Q
    |||||||||| ||||| ||| ||||||||  |||||| ||  | |||||||||| | |||| |||||||| |||||||||||| ||||  |||||  |||    
T  15056967 tcctcttcttcgtgaccaagtttaaccacgtatctttattctctttcaattcctttgttgttcaaaatagattgcaatagcttcttagatttcttttaaa 15057066  T
Q  231 atcaaagtaattgtt----atatgattggtgtggggtttggtttgttgattttgcagtt 285  Q
    ||||| |||||||||    ||||||||| |||  |||||||| ||||||||||| ||||    
T  15057067 atcaacgtaattgttgttcatatgattgttgt-aggtttggtatgttgattttggagtt 15057124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 47964156 - 47964110
Alignment:
Q  264 ttggtttgttgattttgcagttcaggaattttcaaattcggggttgg 310  Q
    |||||||||||||||| ||||| | ||||||||||||| ||||||||    
T  47964156 ttggtttgttgattttacagtttatgaattttcaaattaggggttgg 47964110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 384
Target Start/End: Original strand, 14991327 - 14991419
Alignment:
Q  292 ttttcaaattcggggttggaataagagtaggagcatttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    ||||| |||| ||||||| |||||||||   |  ||||||||| |||||| |||||||||||||| |  |||||  || ||||||||||||||    
T  14991327 ttttctaattgggggttgtaataagagtgaaaatatttgtttaatttgatctttggttatttgtattatgatgagattctgaattgcattgct 14991419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41861975 - 41861939
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41861975 caaaccctaaccatgatttcctaatttccctcctcct 41861939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41862066 - 41862030
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41862066 caaaccctaaccatgatttcctaatttccctcctcct 41862030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41862157 - 41862121
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41862157 caaaccctaaccatgatttcctaatttccctcctcct 41862121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41862248 - 41862212
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41862248 caaaccctaaccatgatttcctaatttccctcctcct 41862212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41862439 - 41862403
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41862439 caaaccctaaccatgatttcctaatttccctcctcct 41862403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41946674 - 41946638
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41946674 caaaccctaaccatgatttcctaatttccctcctcct 41946638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41946765 - 41946729
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41946765 caaaccctaaccatgatttcctaatttccctcctcct 41946729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 52680359 - 52680395
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  52680359 caaaccctaaccatgatttcctaatttccctcctcct 52680395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 53285696 - 53285732
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  53285696 caaaccctaaccatgatttcctaatttcactcctcct 53285732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 243; Significance: 1e-134; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 128 - 382
Target Start/End: Original strand, 26950254 - 26950508
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26950254 tcctcctcttttctgtgactaaggttaaccacacatctttctttgcattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 26950353  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26950354 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 26950453  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattg 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26950454 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattg 26950508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 128 - 384
Target Start/End: Complemental strand, 36092793 - 36092537
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36092793 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 36092694  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36092693 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcatgaattttcaaattcggggttggaataagagtaggagcat 36092594  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36092593 ttgtttagtttgatttttggttatttgtaatctgatgactttttgaattgcattgct 36092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 18200483 - 18200739
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18200483 tcctcctcttttatgtgactaaggttaaccacacatctttctctccattcaattcctctattgtacaaaatagcttgcaatagctttttagacttcttac 18200582  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  18200583 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaatttggggttggaataagaataggagcat 18200682  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18200683 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 18200739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 12807663 - 12807577
Alignment:
Q  266 ggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcatttgtttagtttgatttttggttatt 352  Q
    |||||||||||||| ||||| | ||||||||||||| ||||||   |||||||||  | |||||||||| |||||||||||||||||    
T  12807663 ggtttgttgattttacagtttatgaattttcaaattaggggttaagataagagtaataacatttgtttaatttgatttttggttatt 12807577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 14458557 - 14458470
Alignment:
Q  272 ttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcatttgtttagtttgatttttggttatttgtaatc 359  Q
    |||||||| ||||| | ||||||||||||| || |||   |||||||||  |||||||||||| ||| ||||||||| ||| ||||||    
T  14458557 ttgattttacagtttatgaattttcaaattaggagttaagataagagtaatagcatttgtttaattttatttttggtaattcgtaatc 14458470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 854976 - 855012
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  854976 caaaccctaaccatgatttcctaatttccctcctcct 855012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 6953327 - 6953291
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  6953327 caaaccctaaccatgatttcctaatttccctcctcct 6953291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 6953466 - 6953430
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  6953466 caaaccctaaccatgatttcctaatttccctcctcct 6953430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 6953848 - 6953812
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  6953848 caaaccctaaccatgatttcctaatttccctcctcct 6953812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 18199352 - 18199388
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  18199352 caaaccctaaccatgatttcctaatttccctcctcct 18199388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 36093909 - 36093873
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  36093909 caaaccctaaccatgatttcctaatttccctcctcct 36093873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 36094000 - 36093964
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  36094000 caaaccctaaccatgatttcctaatttccctcctcct 36093964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 36947761 - 36947725
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  36947761 caaaccctaaccatgatttcctaatttccctcctcct 36947725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 36947900 - 36947864
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  36947900 caaaccctaaccatgatttcctaatttccctcctcct 36947864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 36948039 - 36948003
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  36948039 caaaccctaaccatgatttcctaatttccctcctcct 36948003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 22005714 - 22005970
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22005714 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 22005813  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22005814 aaaatcaaagtaattgttatatgattggtgtggggtttggttttttgattttgcagttcaggaattttcaaattcggggttgaaataagagtaggagcat 22005913  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22005914 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 22005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 7892490 - 7892746
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7892490 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaacagctttttaggcttcttac 7892589  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  7892590 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttgaaataagagtatgagcat 7892689  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7892690 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattggattgct 7892746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 127 - 384
Target Start/End: Complemental strand, 3599241 - 3598984
Alignment:
Q  127 atcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttctta 226  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3599241 atcctcctcttatctgtgactaaggttaaccacacatctttctttacattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttctta 3599142  T
Q  227 caaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagca 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  3599141 caaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgtagttcaggaattttcaaattcggggttggaataagagtgggagca 3599042  T
Q  327 tttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  3599041 tttgtttagtttgatttttggttatttgtatttcgatgactttttgaattgcattgct 3598984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 13604262 - 13604145
Alignment:
Q  266 ggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcatttgtttagtttgatttttggttatttgtaatccgatga 365  Q
    |||||||||||||| || || | ||||||||||||| ||||||   |||||||||  | |||||||||| ||||||||||||||||| |||||| | |||    
T  13604262 ggtttgttgattttacattt-atgaattttcaaattaggggttaagataagagtaataacatttgtttaatttgatttttggttattcgtaatctggtga 13604164  T
Q  366 ctttttgaattgcattgct 384  Q
     | ||| ||||| ||||||    
T  13604163 gtgtttaaattgtattgct 13604145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 3600185 - 3600149
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  3600185 caaaccctaaccatgatttcctaatttccctcctcct 3600149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 5090967 - 5091003
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  5090967 caaaccctaaccatgatttcctaatttcactcctcct 5091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 7891382 - 7891418
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  7891382 caaaccctaaccatgatttcctaatttccctcctcct 7891418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 13927440 - 13927476
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  13927440 caaaccctaaccatgatttcctaatttccctcctcct 13927476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 22004323 - 22004359
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  22004323 caaaccctaaccatgatttcctaatttccctcctcct 22004359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 22004514 - 22004550
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  22004514 caaaccctaaccatgatttcctaatttccctcctcct 22004550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 22004605 - 22004641
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  22004605 caaaccctaaccatgatttcctaatttccctcctcct 22004641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 32674006 - 32674262
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32674006 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaataacttgcaatagctttttaggcttcttac 32674105  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32674106 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcaattcaggaattttcaaattcggggttggaataagagtaggagcat 32674205  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32674206 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 32674262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 128 - 324
Target Start/End: Complemental strand, 22636891 - 22636691
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    ||||||||||||  |||||||||||||||| || |||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  22636891 tcctcctcttctccgtgactaaggttaaccgcatatctttctttccgttcaattcctcttttgttcaaaatagcttgcaatagctttttaggcttcttac 22636792  T
Q  228 aaaatcaaagtaattgtt----atatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtagga 323  Q
    ||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||| | || |||||||||| | |||||||| ||||||||||    
T  22636791 aaaatcaaagtaattgttgttcatatgattggtgtggggttttgtttgttgattttgcagtttatgagttttcaaattggtggttggaaaaagagtagga 22636692  T
Q  324 g 324  Q
    |    
T  22636691 g 22636691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 359
Target Start/End: Original strand, 21122329 - 21122422
Alignment:
Q  266 ggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcatttgtttagtttgatttttggttatttgtaatc 359  Q
    |||||||||||||| | ||  | ||||||| ||||| ||||||   |||||||||  |||||||||||| ||| ||||||||||||| ||||||    
T  21122329 ggtttgttgattttacggtctatgaatttttaaattaggggttaagataagagtaatagcatttgtttaattttatttttggttattcgtaatc 21122422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 20844506 - 20844542
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  20844506 caaaccctaaccatgatttcctaatttccctcctcct 20844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 23179540 - 23179576
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  23179540 caaaccctaaccatgatttcctaatttccctcctcct 23179576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 23179631 - 23179667
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  23179631 caaaccctaaccatgatttcctaatttccctcctcct 23179667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 32672891 - 32672927
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  32672891 caaaccctaaccatgatttcctaatttccctcctcct 32672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 13906996 - 13907252
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13906996 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 13907095  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13907096 aaaatcaaagtaattgttatatgattggtgtggggtttggttttttgattttgcagttcaggaattttcaaattcggggttgaaataagagtaggagcat 13907195  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13907196 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 13907252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 26454641 - 26454897
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26454641 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaacagctttttaggcttcttac 26454740  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  26454741 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttgaaataagagtatgagcat 26454840  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26454841 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 26454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 40604478 - 40604734
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  40604478 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaacaactttttaggcttcttac 40604577  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  40604578 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcagaaattttcaaattcggggttgaaataagagtatgagcat 40604677  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40604678 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattggattgct 40604734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 32287325 - 32287361
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    |||||||||||||||||||||||||||| ||||||||    
T  32287325 caaaccctaaccatgatttcctaatttccatcctcct 32287361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 13899908 - 13899944
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  13899908 caaaccctaaccatgatttcctaatttccctcctcct 13899944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 13905806 - 13905842
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  13905806 caaaccctaaccatgatttcctaatttccctcctcct 13905842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 26453534 - 26453570
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  26453534 caaaccctaaccatgatttcctaatttccctcctcct 26453570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 35433175 - 35433139
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  35433175 caaaccctaaccatgatttcctaatttccctcctcct 35433139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 40603369 - 40603405
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  40603369 caaaccctaaccatgatttcctaatttccctcctcct 40603405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 233; Significance: 1e-128; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 128 - 384
Target Start/End: Original strand, 3590335 - 3590591
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3590335 tcctcctcttttatgtgactaaggttaaccacacatctttctctctattcaattcctctattgtacaaaatagcttgcaatagctttttagacttcttac 3590434  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3590435 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcagcaattttcaaattcggggttggaataagagtaggagcat 3590534  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3590535 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 3590591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 128 - 384
Target Start/End: Complemental strand, 35595940 - 35595684
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35595940 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 35595841  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35595840 aaaatcaaaataattgttatatgattggtgtgggatttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtgggagcat 35595741  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35595740 ttgtttagtttgatttttggttatttgtaatccgttgactttttgaattgcattgct 35595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 128 - 384
Target Start/End: Complemental strand, 2046239 - 2045983
Alignment:
Q  128 tcctcctcttctttgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaatagctttttaggcttcttac 227  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2046239 tcctcctcttttctgtgactaaggttaaccacacatctttctttccattcaattcctctattgtacaaaatagcttgcaacagctttttaggcttcttac 2046140  T
Q  228 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgttgattttgcagttcaggaattttcaaattcggggttggaataagagtaggagcat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  2046139 aaaatcaaagtaattgttatatgattggtgtggggtttggtttgtttattttgcagttcaggaattttcaaattcggggttgaaataagagtatgagcat 2046040  T
Q  328 ttgtttagtttgatttttggttatttgtaatccgatgactttttgaattgcattgct 384  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2046039 ttatttagtttgatttttggttatttgtaatccgatgactttttgaattggattgct 2045983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 2052010 - 2051974
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  2052010 caaaccctaaccatgatttcctaatttccctcctcct 2051974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 39514243 - 39514207
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  39514243 caaaccctaaccatgatttcctaatttccctcctcct 39514207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 45507290 - 45507254
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  45507290 caaaccctaaccatgatttcctaatttccctcctcct 45507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 45507439 - 45507403
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  45507439 caaaccctaaccatgatttcctaatttccctcctcct 45507403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 49791648 - 49791612
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  49791648 caaaccctaaccatgatttcctaatttccctcctcct 49791612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 41422 - 41458
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    |||||||||||||||||||||||||||| ||||||||    
T  41422 caaaccctaaccatgatttcctaatttccatcctcct 41458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 41240 - 41276
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41240 caaaccctaaccatgatttcctaatttccctcctcct 41276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 41331 - 41367
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  41331 caaaccctaaccatgatttcctaatttccctcctcct 41367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 36132 - 36168
Alignment:
Q  98 caaaccctaaccatgatttcctaatttctatcctcct 134  Q
    ||||||||||||||||||||||||||||  |||||||    
T  36132 caaaccctaaccatgatttcctaatttccctcctcct 36168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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