View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0977-Insertion-3 (Length: 236)
Name: NF0977-Insertion-3
Description: NF0977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0977-Insertion-3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 27328882 - 27329109
Alignment:
| Q |
8 |
atcacattatttgcatgccactaaaatagcaccacaaattcatttggagtttgttgctctaagaaaaaataaatgtattaaattaaagttagctcttgag |
107 |
Q |
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| T |
27328882 |
atcacattatttgcatgccactaaaatagcaccgcaaattcatttggagttggttgctctaagaaaaaataaatgtattatattaaagttagctcttgag |
27328981 |
T |
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| Q |
108 |
catattagtttgannnnnnnnaagaattgggaactagtagtgttcattttaaggtacaccatgaaaccnnnnnnnnnnattctttaaaagtgctctaact |
207 |
Q |
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| T |
27328982 |
catattagtttgatttttttaaagaattgggaactagtagtgttcattttaaggtacaccatgaaacc-tttttttttattctttaaaagtgctctaact |
27329080 |
T |
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| Q |
208 |
tcatgtttgtaagacctttattaaccagg |
236 |
Q |
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| T |
27329081 |
tcatgtttgcaagacctttattaaccagg |
27329109 |
T |
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