View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0979-INSERTION-24 (Length: 826)

Name: NF0979-INSERTION-24
Description: NF0979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0979-INSERTION-24
NF0979-INSERTION-24
[»] chr2 (3 HSPs)
chr2 (8-826)||(20923802-20924620)
chr2 (275-493)||(20953676-20953894)
chr2 (275-459)||(20935172-20935356)
[»] chr1 (35 HSPs)
chr1 (305-484)||(3362433-3362612)
chr1 (281-457)||(3379471-3379647)
chr1 (281-499)||(3373406-3373624)
chr1 (305-501)||(3341951-3342146)
chr1 (281-456)||(4334137-4334312)
chr1 (31-214)||(3374001-3374184)
chr1 (616-761)||(2006841-2006986)
chr1 (275-447)||(2012706-2012878)
chr1 (305-473)||(3217746-3217914)
chr1 (306-497)||(1793403-1793594)
chr1 (380-497)||(2007173-2007290)
chr1 (305-484)||(2947686-2947864)
chr1 (30-214)||(2947232-2947413)
chr1 (379-531)||(4322347-4322494)
chr1 (389-497)||(2011159-2011267)
chr1 (119-214)||(1794019-1794114)
chr1 (371-472)||(3193357-3193458)
chr1 (371-472)||(3202175-3202276)
chr1 (371-472)||(3211012-3211113)
chr1 (380-443)||(2020466-2020529)
chr1 (36-163)||(3363952-3364079)
chr1 (24-77)||(3342704-3342757)
chr1 (30-161)||(3353328-3353456)
chr1 (305-484)||(3350055-3350233)
chr1 (389-456)||(9809882-9809949)
chr1 (389-484)||(9820652-9820746)
chr1 (15-77)||(2007915-2007977)
chr1 (24-214)||(3366295-3366485)
chr1 (24-214)||(3380127-3380317)
chr1 (530-569)||(3373275-3373314)
chr1 (24-95)||(4333595-4333666)
chr1 (24-62)||(1794136-1794174)
chr1 (116-166)||(3217287-3217337)
chr1 (617-659)||(3349865-3349907)
chr1 (24-77)||(2021052-2021105)
[»] chr4 (3 HSPs)
chr4 (281-461)||(21238219-21238399)
chr4 (24-214)||(21238804-21238994)
chr4 (620-762)||(21237924-21238066)
[»] chr5 (3 HSPs)
chr5 (31-212)||(17971013-17971194)
chr5 (275-370)||(17970596-17970691)
chr5 (409-461)||(17970505-17970557)


Alignment Details
Target: chr2 (Bit Score: 735; Significance: 0; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 735; E-Value: 0
Query Start/End: Original strand, 8 - 826
Target Start/End: Complemental strand, 20924620 - 20923802
Alignment:
Q  8 ctttttgagcacatgtgaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgagg 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20924620 ctttttgagcacaggtgaatagagaagtagaaatctgataaaatctaattcagatttggtaccagagatgtcttgtatctccacatgttgcaatttgagg 20924521  T
Q  108 agcatatctggctccgaaaagatatcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaa 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20924520 agcatatctggctccgaaaagatatcttcccaacaataggaggtgtgtgttaaaaggtctgtctcctccttaagtcgtgcctacatgcaattgttacaaa 20924421  T
Q  208 ttcatggttcggcatagggaaaatatcatatatgcatatgagagatatacagcatatcaaaattttgaatgattactcacaaacattttgaatgtttgaa 307  Q
    |||||||||| ||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20924420 ttcatggttcagcatagggaaaatatcatat--gcatatgatagatatacatcatatcaaaattttgaatgattactcacaaacattttgaatgtttgaa 20924323  T
Q  308 gattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaagttt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20924322 gattaggcgagcttttgagcaagcaaagaacagccgaaatttccgtcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaagtgt 20924223  T
Q  408 aggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataatgtttctaatacttacagttacag 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20924222 aggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaatcagaatataatgtttctaatacttacagttacag 20924123  T
Q  508 atcaagagttgcatacacatgat--cactcatacagtcaaattcaacattcatatgcttgagcagtatacctttatataataggaagcaatcagtaggct 605  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20924122 atcaagagttgcatacacatgatcacactcatacagtcaaattcaacattcatatgcttgagcagtatacctttatagaataggaagcaatcagtaggct 20924023  T
Q  606 ctggatgttgtgtagatgatcgaaaaatttaagcaagttgctagagcatccatggaacatactttgatcggtttcagagttcaaatacgatcttaaatca 705  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |    
T  20924022 ctggatgttgtgtagatgatcgaaaaatttaagcaagttgctagagcatccatggaacatactttgaccggtttcagagttcaaatacgaacttaaatta 20923923  T
Q  706 acaaacaccttagctagttgggaggtgttgtcaaagctaataccctcaaaattacccctgatgtcaacatacttgatacttggtgaatgaatattaattt 805  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  20923922 acaaacaccttagctagttgggaggtgttgtcaaagctaataccctcaaaattacccctaatgtcaacatacttgatacttggtgaatgaatgttaattt 20923823  T
Q  806 gagtgaatccatcaacttttt 826  Q
    |||||||||||||||||||||    
T  20923822 gagtgaatccatcaacttttt 20923802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 275 - 493
Target Start/End: Complemental strand, 20953894 - 20953676
Alignment:
Q  275 aatgattactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggca 374  Q
    ||||| |||||||||| ||||  ||| || |||||||||| |||||| |||||||||||||| |||||||||||||| | | || || |||||||| |||    
T  20953894 aatgagtactcacaaatatttctaattttcgaagattaggtgagcttctgagcaagcaaagagcagccgaaatttcctttaggttgtcgaagtttatgca 20953795  T
Q  375 tatggaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaatt 474  Q
    || ||||||| |  |||||| ||||||| || ||||||||||||||||||  ||||||||||||||||||||||||| | ||||| | |||||||||||     
T  20953794 taaggaaagatagcttagataaatacaaggtgtaggaagctttactggcaaaacacctgcagccaaatactgaagcacaccagaaaaatgactctaaatc 20953695  T
Q  475 agaatataatgtttctaat 493  Q
    |||||| || |||| ||||    
T  20953694 agaatacaaggtttttaat 20953676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 275 - 459
Target Start/End: Complemental strand, 20935356 - 20935172
Alignment:
Q  275 aatgattactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggca 374  Q
    ||||| |||||||||| ||||  ||| || |||||||||| |||||| |||||||||||||| |||||||||||||| ||||||| | |||||||| ||     
T  20935356 aatgagtactcacaaatatttctaattttcgaagattaggtgagcttctgagcaagcaaagagcagccgaaatttccttcaagtcatcgaagtttatgct 20935257  T
Q  375 tatggaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaa 459  Q
     | |||||||    ||||||  |||||| || |||||||||||  |||||  |||||||||| || |||||||||| ||||||||    
T  20935256 caaggaaagatgacttagatccatacaaggtgtaggaagcttttttggcaaaacacctgcagtcagatactgaagcgaaacagaa 20935172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 305 - 484
Target Start/End: Complemental strand, 3362612 - 3362433
Alignment:
Q  305 gaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaag 404  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||| | ||||||| | ||||| || ||||| |||||||  | | ||||| |||||| |    
T  3362612 gaagattaggtgagcttttgagcaagcaaagagcagccaaaattttcttcaagtcatcgaagtctatgcataaggaaagatgtctgagattgatacaagg 3362513  T
Q  405 tttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataat 484  Q
    | | |||||||||| |||||| |||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||    
T  3362512 tgtgggaagctttattggcacaacacctgcagccaaatactgaagcaaaacagaagaacaactctaaatcagaatataat 3362433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 281 - 457
Target Start/End: Complemental strand, 3379647 - 3379471
Alignment:
Q  281 tactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatgga 380  Q
    |||||||||| ||||  ||| ||| ||| ||||| |||||| |||||||||||||  |||||||||||||| ||||| | ||||||||||  |||| |||    
T  3379647 tactcacaaatatttccaattttttaaggttaggggagcttctgagcaagcaaagggcagccgaaatttccttcaagacattgaagtttatacataagga 3379548  T
Q  381 aagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacag 457  Q
    |||| |  ||||||  |||||| || |||||||||||||||  ||  ||||||||||||||||||||||||||||||    
T  3379547 aagataacttagatcgatacaaggtgtaggaagctttactgatacatcacctgcagccaaatactgaagcaaaacag 3379471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 499
Target Start/End: Complemental strand, 3373624 - 3373406
Alignment:
Q  281 tactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatgga 380  Q
    |||||||||| ||||  ||| ||| ||||||||| |||||| |||||||||||||| |||| ||||||||| ||||||| |||||||||| ||||| |||    
T  3373624 tactcacaaatatttctaattttttaagattaggtgagcttctgagcaagcaaagagcagctgaaatttccttcaagtcattgaagtttatgcataagga 3373525  T
Q  381 aagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaata 480  Q
    |||      |||  | |||||| ||  ||||||||||||||||||  || ||||||||||||||| || ||||| ||||||  | | |||||| ||||||    
T  3373524 aagctcacataggctgatacaaggtgcaggaagctttactggcacatcatctgcagccaaatactaaaacaaaatagaagaacgtcactaaatcagaata 3373425  T
Q  481 taatgtttctaatacttac 499  Q
    ||||||||  |||||||||    
T  3373424 taatgttttaaatacttac 3373406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 305 - 501
Target Start/End: Complemental strand, 3342146 - 3341951
Alignment:
Q  305 gaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaag 404  Q
    |||||||||| || || ||||||||||||||||||||| |||||| | ||||||| |||||||||| || ||    || || | ||||||| |||||| |    
T  3342146 gaagattaggtgaactgttgagcaagcaaagaacagccaaaattttcttcaagtcattgaagtttatgcttacacgaaaaatttttagattgatacaagg 3342047  T
Q  405 tttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataatgtttctaatacttacag 501  Q
    | ||||||||||||||||||| | ||||||||||||||||||| ||||||||  ||| |  |||| ||| |||||||||||||| ||| ||| ||||    
T  3342046 tgtaggaagctttactggcacaatacctgcagccaaatactgaggcaaaacaagagaatctctct-aatcagaatataatgtttttaaaactaacag 3341951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 281 - 456
Target Start/End: Original strand, 4334137 - 4334312
Alignment:
Q  281 tactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatgga 380  Q
    |||||||| | ||||| ||| ||||||| ||||| |||||| ||| ||  |||||| | ||||||||||||  || ||  | |||||||| |  || |||    
T  4334137 tactcacagatatttttaatttttgaaggttaggtgagcttctgaacacacaaagagcggccgaaatttcctccatgttatcgaagtttatggttaagga 4334236  T
Q  381 aagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaaca 456  Q
    ||||||  |||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  4334237 aagaaaacttagattaatacaaggtgtaggaagctttactggcaaaacacctgcagccaaatactgaagcataaca 4334312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 3374184 - 3374001
Alignment:
Q  31 gaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccgaaaagat 130  Q
    |||||||||| |  |||||||| ||||| ||| || ||||||||||| | | |||  |||||||||| | ||  | | ||||  ||||| | ||||||||    
T  3374184 gaagtagaaaccgaataaaatctaattctgatctgataccagagatgccatctattgtcacatgttgtacttgaatgggcatggctggccctgaaaagat 3374085  T
Q  131 atcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcatgg 214  Q
    |||||||||||||||||| ||| | ||||||||| | |||| ||||| ||  ||||||||||||||||||| ||||||||||||    
T  3374084 atcttcccaacaataggatgtgggcgttaaaaggacagtctcctcctcaatccgtgcctacatgcaattgtaacaaattcatgg 3374001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 616 - 761
Target Start/End: Complemental strand, 2006986 - 2006841
Alignment:
Q  616 tgtagatgatcgaaaaatttaagcaagttgctagagcatccatggaacatactttgatcggtttcagagttcaaatacgatcttaaatcaacaaacacct 715  Q
    ||||||||| | ||||| || ||||||||||| | || |||||| ||  ||||||||| | ||||||||||||||||| | |||||||||||||| || |    
T  2006986 tgtagatgagcaaaaaaattgagcaagttgctggggcttccatgcaatctactttgattgctttcagagttcaaatacaaacttaaatcaacaaatacat 2006887  T
Q  716 tagctagttgggaggtgttgtcaaagctaataccctcaaaattacc 761  Q
     | ||| |||| | |||||||||||||||||| ||||||| |||||    
T  2006886 aatctaattggaaagtgttgtcaaagctaatatcctcaaatttacc 2006841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 275 - 447
Target Start/End: Complemental strand, 2012878 - 2012706
Alignment:
Q  275 aatgattactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggca 374  Q
    ||||| |||||||||| || || |||  || |||||||||||||||| ||| ||  || ||| |||  ||||||||  ||||||||| ||||||||  |     
T  2012878 aatgagtactcacaaatatatttaattctttaagattaggcgagcttctgaacacacatagagcagttgaaatttctttcaagtcgtagaagtttatact 2012779  T
Q  375 tatggaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactga 447  Q
    ||   ||||| | ||||||||||||||| || ||||||||||||||||||| ||||||||||| |||||||||    
T  2012778 taaccaaagatacgttagattaatacaaggtgtaggaagctttactggcacaacacctgcagctaaatactga 2012706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 305 - 473
Target Start/End: Original strand, 3217746 - 3217914
Alignment:
Q  305 gaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaag 404  Q
    |||||||||| |||||| | |||||||||||| ||||| ||||||   ||||||| |||||  ||| ||||||| ||||| |  ||| ||| |||||| |    
T  3217746 gaagattaggtgagcttctaagcaagcaaagagcagccaaaatttgtttcaagtcattgaaccttatgcatatgaaaagagaacttaaattgatacaagg 3217845  T
Q  405 tttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaat 473  Q
    | | ||||| ||||| |||||  |||||||| ||||||||||||||| || |||||| |||||||||||    
T  3217846 tgtcggaagttttaccggcacatcacctgcatccaaatactgaagcacaatagaagaatgactctaaat 3217914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 306 - 497
Target Start/End: Complemental strand, 1793594 - 1793403
Alignment:
Q  306 aagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaagt 405  Q
    |||||||||||||||| | | || ||| ||| |||| ||||||||| ||||||| |||||||||| || ||   ||||| |||||| ||| |||||| ||    
T  1793594 aagattaggcgagcttctaaacacgcatagagcagctgaaatttccttcaagtcattgaagtttatgcttaaccaaagatatgttatattgatacaaggt 1793495  T
Q  406 ttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataatgtttctaatactt 497  Q
     |||||||| ||  |||||| ||||||||||  ||||||||||| | || |||| | |  || ||||| |||||||||||||| ||||||||    
T  1793494 gtaggaagcattgttggcacaacacctgcagataaatactgaagtagaaaagaaaaattgctataaatcagaatataatgtttataatactt 1793403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 497
Target Start/End: Complemental strand, 2007290 - 2007173
Alignment:
Q  380 aaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaat 479  Q
    ||||| ||||||||||||||||| || |||||||||||||||| ||  |||||||||||||||||||| | | |||| || | |  |||||||| |||||    
T  2007290 aaagatatgttagattaatacaaggtgtaggaagctttactggaacagcacctgcagccaaatactgatgtacaacataaaaatttctctaaatcagaat 2007191  T
Q  480 ataatgtttctaatactt 497  Q
    |||||||||  |||||||    
T  2007190 ataatgttttaaatactt 2007173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 305 - 484
Target Start/End: Original strand, 2947686 - 2947864
Alignment:
Q  305 gaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaag 404  Q
    |||||||||| || ||||||||||||||||||||| | ||||  | | ||||||| ||||||||||  || | | ||| | || ||||||| | ||| ||    
T  2947686 gaagattaggtgaacttttgagcaagcaaagaacaactgaaacctgcttcaagtcattgaagtttatccacaagcaaatagatcttagattgacacacag 2947785  T
Q  405 tttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataat 484  Q
    | ||||||| ||| ||||||| | ||||| ||||||||||| ||||||||||| ||| || |||| ||| ||||||||||    
T  2947786 tgtaggaagtttttctggcacgatacctgtagccaaatactaaagcaaaacaggagaatgtctct-aatcagaatataat 2947864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 214
Target Start/End: Original strand, 2947232 - 2947413
Alignment:
Q  30 agaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccgaaaaga 129  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||| ||   ||  |||| ||||||| |  |||| ||||   ||| |||||||| |    
T  2947232 agaagaagaaatctgataaaatctaattcagatttgataccagaaatgcct---atgctcacgtgttgcactccgaggggcatggatggatccgaaaata 2947328  T
Q  130 tatcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcatgg 214  Q
    |||||| |||||||||||||| | |||||||| || | |||  ||| | | || || |||||||| |||||||||||||||||||    
T  2947329 tatctttccaacaataggaggcgggtgttaaatgggcagtcagctcatcacgttgtacctacatgaaattgttacaaattcatgg 2947413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 531
Target Start/End: Original strand, 4322347 - 4322494
Alignment:
Q  379 gaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaac-agaagagtgactctaaattaga 477  Q
    ||||||||  |||||| ||||||| || ||||||||||||||||||  ||||||||||||||||||||||||| ||| | || |  |  | |||||||||    
T  4322347 gaaagaaaacttagatcaatacaaggtgtaggaagctttactggcaaaacacctgcagccaaatactgaagcagaacaacaataaaggatttaaattaga 4322446  T
Q  478 atataatgtttctaatacttacagttacagatcaagagttgcatacacatgatc 531  Q
    ||||||||||| ||||||       ||| ||||| |||||||||||||||||||    
T  4322447 atataatgtttttaatac------atacggatcaggagttgcatacacatgatc 4322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 2011267 - 2011159
Alignment:
Q  389 ttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataatgttt 488  Q
    |||||||||||||| || |||||||||||| |||||| ||||||||||| ||||||||| | | ||| ||| | |  |||| ||| ||||||||||||||    
T  2011267 ttagattaatacaaggtgtaggaagctttagtggcacaacacctgcagctaaatactgatgtacaacggaaaatttgctctgaatcagaatataatgttt 2011168  T
Q  489 ctaatactt 497  Q
    | |||||||    
T  2011167 caaatactt 2011159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 1794114 - 1794019
Alignment:
Q  119 ctccgaaaagatatcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcatgg 214  Q
    ||||||||||||||||||||||||||||||   |  ||||||| || |  | | ||||| ||| ||||||||||||||||||||||||||||||||    
T  1794114 ctccgaaaagatatcttcccaacaataggaatcgcttgttaaagggacaatttcctcctcaagccgtgcctacatgcaattgttacaaattcatgg 1794019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 472
Target Start/End: Original strand, 3193357 - 3193458
Alignment:
Q  371 ggcatatggaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactcta 470  Q
    |||||||| |||||||  ||||||| |||||| || | ||||||||||| |||||  |||||||| ||||||||| ||||| || |||||| ||||||||    
T  3193357 ggcatatgaaaagaaaacttagattgatacaacgtgtcggaagctttacgggcacatcacctgcatccaaatacttaagcacaatagaagaatgactcta 3193456  T
Q  471 aa 472  Q
    ||    
T  3193457 aa 3193458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 472
Target Start/End: Original strand, 3202175 - 3202276
Alignment:
Q  371 ggcatatggaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactcta 470  Q
    |||||||| |||||||  ||||||| |||||| || | ||||||||||| |||||  |||||||| ||||||||| ||||| || |||||| ||||||||    
T  3202175 ggcatatgaaaagaaaacttagattgatacaacgtgtcggaagctttacgggcacatcacctgcatccaaatacttaagcacaatagaagaatgactcta 3202274  T
Q  471 aa 472  Q
    ||    
T  3202275 aa 3202276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 472
Target Start/End: Original strand, 3211012 - 3211113
Alignment:
Q  371 ggcatatggaaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactcta 470  Q
    |||||||| |||||||  ||||||| |||||| || | ||||||||||| |||||  |||||||| ||||||||| ||||| || |||||| ||||||||    
T  3211012 ggcatatgaaaagaaaacttagattgatacaacgtgtcggaagctttacgggcacatcacctgcatccaaatacttaagcacaatagaagaatgactcta 3211111  T
Q  471 aa 472  Q
    ||    
T  3211112 aa 3211113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 443
Target Start/End: Complemental strand, 2020529 - 2020466
Alignment:
Q  380 aaagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaata 443  Q
    ||||| ||||||||||||||||| || |||||||||||||||| || ||||||||||| |||||    
T  2020529 aaagatatgttagattaatacaaggtgtaggaagctttactggaacaacacctgcagctaaata 2020466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 3364079 - 3363952
Alignment:
Q  36 agaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccgaaaagatatctt 135  Q
    ||||||||||||||||| |||||||||||    ||||||||| | || ||| |||||||| ||| ||  | | ||||   |||||||||||| |||| ||    
T  3364079 agaaatctgataaaatctaattcagatttaaagccagagatgccatgcatcctcacatgtcgcacttcaatgggcattgttggctccgaaaatatatttt 3363980  T
Q  136 cccaacaataggaggtgtgtgttaaaag 163  Q
    |||||||||||||||||  |||||||||    
T  3363979 cccaacaataggaggtggatgttaaaag 3363952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 3342757 - 3342704
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatg 77  Q
    ||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  3342757 gaatatagaagtagaaattggataaaatctaattcagatttggtaccagagatg 3342704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 3353456 - 3353328
Alignment:
Q  30 agaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccgaaaaga 129  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||| |   |||  |||| ||||||| |  |||| ||||   ||| |||||||| |    
T  3353456 agaagaagaaatctgataaaatctaattcagatttgataccagaaatgcc---tatgctcacgtgttgcactccgaggggcatggatggatccgaaaata 3353360  T
Q  130 tatcttcccaacaataggaggtgtgtgttaaa 161  Q
    |||||| |||||||||||||| | ||||||||    
T  3353359 tatctttccaacaataggaggcgggtgttaaa 3353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 305 - 484
Target Start/End: Complemental strand, 3350233 - 3350055
Alignment:
Q  305 gaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatggaaagaaatgttagattaatacaaag 404  Q
    |||| ||||| || ||||||||||||||||| ||| | ||||| | | ||||||| ||||||||||  || | | ||| | || ||||||| | | | |     
T  3350233 gaaggttaggtgaacttttgagcaagcaaagtacaactgaaatctgcttcaagtcattgaagtttatccacaagcaaatagatcttagattgacaaacaa 3350134  T
Q  405 tttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataat 484  Q
    | ||||||| ||| ||||||| | ||||||||||||||||| || |||||||| ||| || |||| ||| ||||||||||    
T  3350133 tgtaggaagttttgctggcacaatacctgcagccaaatactaaaccaaaacaggagaatgtctct-aatcagaatataat 3350055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 389 - 456
Target Start/End: Complemental strand, 9809949 - 9809882
Alignment:
Q  389 ttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaaca 456  Q
    ||||||| | ||| ||||||||||| ||| ||||||| | ||||||||||||||| ||||||||||||    
T  9809949 ttagattgacacacagtttaggaagttttgctggcacaatacctgcagccaaatattgaagcaaaaca 9809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 389 - 484
Target Start/End: Complemental strand, 9820746 - 9820652
Alignment:
Q  389 ttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaagagtgactctaaattagaatataat 484  Q
    ||||||| | ||| ||||||||||| | | || |||| | |||||||||||||||||||||||||||| |||| || |||| ||| ||||||||||    
T  9820746 ttagattgacacacagtttaggaagttctgctagcacaatacctgcagccaaatactgaagcaaaacaaaagaatgtctct-aatcagaatataat 9820652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 2007977 - 2007915
Alignment:
Q  15 agcacatgtgaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatg 77  Q
    |||||| | |||| ||||||||||||||| |||||||| |||||||||||| | |||||||||    
T  2007977 agcacaggcgaatggagaagtagaaatctcataaaatctaattcagatttgatgccagagatg 2007915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 3366485 - 3366295
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccg 123  Q
    |||||| |||||||||| |  |||||||| | ||| |||||| ||||||||||| | | |||  |||||||| ||| |   | | ||||  ||||| | |    
T  3366485 gaatagcgaagtagaaaccgaataaaatctagttccgatttgataccagagatgccatctattgtcacatgtcgcactcgaatgggcatggctggccctg 3366386  T
Q  124 aaaagatatcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcatgg 214  Q
    |||||||||||| | |||||||||| ||| | ||||||||| | |||| ||||  ||  |||||||||||||||| ||  |||||||||||    
T  3366385 aaaagatatcttacgaacaataggatgtgggagttaaaaggacagtctgctccacaaaccgtgcctacatgcaatcgtagcaaattcatgg 3366295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 3380317 - 3380127
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccg 123  Q
    ||||||||||||||||| |  |||||||| ||||| |||||| ||||||||||||| | |||  |||||||| ||| |   | | |  |  |||||   |    
T  3380317 gaatagagaagtagaaaccgaataaaatctaattccgatttgataccagagatgtcatctattgtcacatgtcgcactcgaatgggattgactggccttg 3380218  T
Q  124 aaaagatatcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcatgg 214  Q
    |||||||| |||||||||||||| | ||| | ||||||| | |  ||  ||||| ||  ||||||||||||||||||| ||||||||||||    
T  3380217 aaaagataacttcccaacaatagaatgtgggagttaaaatgacactcagctcctcaaaccgtgcctacatgcaattgtcacaaattcatgg 3380127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 569
Target Start/End: Complemental strand, 3373314 - 3373275
Alignment:
Q  530 tcactcatacagtcaaattcaacattcatatgcttgagca 569  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  3373314 tcactcctacagtcaaattctacattcatatgcttgagca 3373275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 4333595 - 4333666
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgt 95  Q
    ||||| ||||||||||||||||| ||||  |||||||| | ||||||||||||| | | |||| ||||||||    
T  4333595 gaatatagaagtagaaatctgatcaaatttaattcagactgggtaccagagatgccatctatcgtcacatgt 4333666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 1794174 - 1794136
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagat 62  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  1794174 gaatatagaagtagaaatctgataaaatctaattcagat 1794136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 3217287 - 3217337
Alignment:
Q  116 tggctccgaaaagatatcttcccaacaataggaggtgtgtgttaaaaggtc 166  Q
    ||||||| |||||| ||||| |||||||||||||| | |||||||||||||    
T  3217287 tggctccaaaaagacatctttccaacaataggaggcgggtgttaaaaggtc 3217337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Complemental strand, 3349907 - 3349865
Alignment:
Q  617 gtagatgatcgaaaaatttaagcaagttgctagagcatccatg 659  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||    
T  3349907 gtagatgatcgaaaaatttgagcaaattgctagagaatccatg 3349865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 2021105 - 2021052
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatg 77  Q
    |||||||||||||||||||| | |||||| ||||||| |||  |||||||||||    
T  2021105 gaatagagaagtagaaatctcaaaaaatctaattcagctttcataccagagatg 2021052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 281 - 461
Target Start/End: Complemental strand, 21238399 - 21238219
Alignment:
Q  281 tactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagtttaggcatatgga 380  Q
    |||||||| | ||||| ||| || | |||||||| |||||| |||||||||| ||| ||||||| |||||| ||||||| |||||||||| |  ||   |    
T  21238399 tactcacagatatttttaattttcgcagattaggtgagcttctgagcaagcagagagcagccgagatttccttcaagtcattgaagtttatgtttaacaa 21238300  T
Q  381 aagaaatgttagattaatacaaagtttaggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaaga 461  Q
    ||||    |||||| ||||||| || |||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  21238299 aagatggcttagatgaatacaaggtgtaggaagctttactggaacgacacctgcagccaaatactgaagcagaacagaaga 21238219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 21238994 - 21238804
Alignment:
Q  24 gaatagagaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccg 123  Q
    |||| |||||||||||||||||||||||| || |||||||    |||||||||    | |||  | |||||||||| ||||||| |||| ||||||   |    
T  21238994 gaattgagaagtagaaatctgataaaatctaactcagattgaaaaccagagattatgtctattgttacatgttgcactttgaggggcatgtctggccggg 21238895  T
Q  124 aaaagatatcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcatgg 214  Q
    |||||||||||||||||||||||||||   ||||||| ||||| |||| |||||  |  |||||||||| ||||||||||| |||||||||    
T  21238894 aaaagatatcttcccaacaataggaggccggtgttaagaggtcagtctgctcctctatccgtgcctacaagcaattgttacgaattcatgg 21238804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 762
Target Start/End: Complemental strand, 21238066 - 21237924
Alignment:
Q  620 gatgatcgaaaaatttaagcaagttgctagagcatccatggaacatactttgatcggtttcagagttcaaatacgatcttaaatcaacaaacaccttagc 719  Q
    |||||| |||||| || |||||  | |||||||||||||| ||  ||| |||||  |||||||||||||||||| | ||||||||||| |  ||| || |    
T  21238066 gatgattgaaaaaattgagcaaactactagagcatccatgcaatctacgttgattagtttcagagttcaaatacaaacttaaatcaacgagtaccgtaac 21237967  T
Q  720 tagttgggaggtgttgtcaaagctaataccctcaaaattaccc 762  Q
     | |||| | || ||||||||||||||| | ||||| ||||||    
T  21237966 aaattggaaagttttgtcaaagctaatatcgtcaaatttaccc 21237924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 6e-24; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 31 - 212
Target Start/End: Complemental strand, 17971194 - 17971013
Alignment:
Q  31 gaagtagaaatctgataaaatcgaattcagatttggtaccagagatgtcttgtatcttcacatgttgcaatttgaggagcatatctggctccgaaaagat 130  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||| ||||  ||||| || ||   |||||  |||   |||| | ||||||||    
T  17971194 gaagtagaaatctaatgaaatctaattcagatttggtaccagagatgtcttttatcaccacatatttcacactgagggacatggttggccctgaaaagat 17971095  T
Q  131 atcttcccaacaataggaggtgtgtgttaaaaggtctgtcttctccttaagtcgtgcctacatgcaattgttacaaattcat 212  Q
    |||||||  ||||| ||||    |||||| |||||| |||| ||||| ||| |||||||||||| |||||||||||||||||    
T  17971094 atcttccatacaattggagacaggtgttacaaggtcagtctgctcctcaagacgtgcctacatgaaattgttacaaattcat 17971013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 17970691 - 17970596
Alignment:
Q  275 aatgattactcacaaacattttgaatgtttgaagattaggcgagcttttgagcaagcaaagaacagccgaaatttccatcaagtcgttgaagttta 370  Q
    ||||| ||||||||| |||| | ||| ||||||||||||| |||||||||||||| ||| ||||| ||||||||||| ||||||| ||||| ||||    
T  17970691 aatgagtactcacaatcattcttaatctttgaagattaggtgagcttttgagcaaacaaggaacaaccgaaatttccctcaagtcattgaaattta 17970596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 17970557 - 17970505
Alignment:
Q  409 ggaagctttactggcaccacacctgcagccaaatactgaagcaaaacagaaga 461  Q
    ||||||| |||||| || | ||||||||||||||||| |||||||||||||||    
T  17970557 ggaagctctactggaacaatacctgcagccaaatactaaagcaaaacagaaga 17970505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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