View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0979-INSERTION-5 (Length: 659)

Name: NF0979-INSERTION-5
Description: NF0979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0979-INSERTION-5
NF0979-INSERTION-5
[»] chr7 (44 HSPs)
chr7 (8-272)||(1249358-1249620)
chr7 (354-540)||(1249618-1249811)
chr7 (249-385)||(45003007-45003145)
chr7 (237-395)||(28517387-28517547)
chr7 (252-395)||(40726580-40726725)
chr7 (237-395)||(5825120-5825280)
chr7 (251-393)||(21326940-21327084)
chr7 (263-395)||(45613942-45614076)
chr7 (242-324)||(38766176-38766258)
chr7 (242-313)||(38832154-38832225)
chr7 (303-395)||(48539094-48539188)
chr7 (263-395)||(19277164-19277300)
chr7 (251-359)||(45974737-45974845)
chr7 (251-395)||(25187031-25187177)
chr7 (236-313)||(36931887-36931963)
chr7 (302-402)||(23037457-23037559)
chr7 (304-395)||(27521385-27521478)
chr7 (282-395)||(982841-982956)
chr7 (283-359)||(27027768-27027844)
chr7 (389-449)||(30216038-30216098)
chr7 (251-395)||(4501120-4501266)
chr7 (283-395)||(24527482-24527596)
chr7 (304-395)||(43856788-43856881)
chr7 (403-447)||(25186918-25186962)
chr7 (251-342)||(2904242-2904332)
chr7 (251-395)||(10904979-10905125)
chr7 (275-342)||(32584485-32584552)
chr7 (298-373)||(38839234-38839311)
chr7 (292-395)||(41117870-41117975)
chr7 (251-300)||(2520918-2520967)
chr7 (304-370)||(5714954-5715022)
chr7 (301-342)||(32336318-32336359)
chr7 (302-395)||(22197899-22197993)
chr7 (302-395)||(22239828-22239922)
chr7 (298-342)||(41071756-41071800)
chr7 (275-338)||(34856750-34856813)
chr7 (394-436)||(24566960-24567002)
chr7 (389-447)||(28517269-28517327)
chr7 (251-356)||(9281277-9281382)
chr7 (251-356)||(9292248-9292353)
chr7 (389-454)||(19277360-19277425)
chr7 (389-453)||(2904432-2904496)
chr7 (389-437)||(21326830-21326878)
chr7 (389-449)||(27521538-27521598)
[»] chr4 (41 HSPs)
chr4 (236-395)||(50001026-50001187)
chr4 (235-395)||(53619431-53619593)
chr4 (233-395)||(23255556-23255720)
chr4 (236-395)||(3329842-3330003)
chr4 (253-395)||(39001260-39001404)
chr4 (246-395)||(4419120-4419270)
chr4 (248-395)||(55933560-55933709)
chr4 (242-395)||(48657015-48657168)
chr4 (251-395)||(600792-600938)
chr4 (251-395)||(30940832-30940978)
chr4 (249-358)||(31846962-31847071)
chr4 (256-382)||(8738071-8738199)
chr4 (265-395)||(50464396-50464528)
chr4 (251-341)||(26521350-26521440)
chr4 (251-325)||(40392726-40392800)
chr4 (251-395)||(16955321-16955467)
chr4 (293-381)||(23242803-23242893)
chr4 (250-345)||(47585160-47585255)
chr4 (252-338)||(12053329-12053415)
chr4 (251-325)||(23604951-23605025)
chr4 (389-447)||(30940721-30940779)
chr4 (236-395)||(46440989-46441150)
chr4 (236-325)||(12917895-12917984)
chr4 (243-312)||(41372253-41372322)
chr4 (251-402)||(132246-132399)
chr4 (249-395)||(34107796-34107944)
chr4 (298-392)||(54190954-54191050)
chr4 (275-351)||(1041310-1041386)
chr4 (275-359)||(50442617-50442701)
chr4 (315-395)||(52403868-52403948)
chr4 (275-338)||(50463102-50463165)
chr4 (389-447)||(50000907-50000965)
chr4 (263-395)||(53170386-53170520)
chr4 (312-395)||(56462206-56462291)
chr4 (275-352)||(9601095-9601171)
chr4 (395-446)||(23255777-23255828)
chr4 (161-232)||(35181763-35181834)
chr4 (304-352)||(3698685-3698733)
chr4 (304-395)||(34213534-34213626)
chr4 (388-424)||(45760839-45760875)
chr4 (302-342)||(49354225-49354265)
[»] chr3 (38 HSPs)
chr3 (235-395)||(26772603-26772765)
chr3 (236-395)||(38670980-38671141)
chr3 (251-391)||(39583333-39583475)
chr3 (251-395)||(53785570-53785716)
chr3 (251-395)||(32546656-32546802)
chr3 (250-395)||(44198627-44198774)
chr3 (295-395)||(13582415-13582517)
chr3 (275-352)||(26276500-26276577)
chr3 (163-231)||(14959178-14959246)
chr3 (282-395)||(26856862-26856977)
chr3 (163-231)||(39491083-39491151)
chr3 (302-395)||(52411991-52412086)
chr3 (251-395)||(46940873-46941019)
chr3 (248-333)||(50657235-50657320)
chr3 (251-395)||(44694-44843)
chr3 (303-395)||(38145969-38146063)
chr3 (275-370)||(4669788-4669885)
chr3 (302-395)||(38978899-38978994)
chr3 (250-342)||(49017827-49017919)
chr3 (251-395)||(4763893-4764038)
chr3 (279-395)||(37133099-37133217)
chr3 (251-395)||(52741612-52741758)
chr3 (251-325)||(8592002-8592076)
chr3 (296-402)||(5338552-5338657)
chr3 (251-359)||(4472923-4473031)
chr3 (315-359)||(53502592-53502636)
chr3 (251-382)||(3643014-3643145)
chr3 (403-438)||(7502002-7502037)
chr3 (389-436)||(26856755-26856802)
chr3 (389-447)||(26772825-26772883)
chr3 (389-447)||(39583211-39583269)
chr3 (389-447)||(44198834-44198892)
chr3 (250-339)||(2601689-2601778)
chr3 (389-438)||(38670872-38670920)
chr3 (294-342)||(26393841-26393889)
chr3 (389-437)||(37132991-37133039)
chr3 (495-535)||(39491212-39491252)
chr3 (359-395)||(51234587-51234623)
[»] chr8 (32 HSPs)
chr8 (235-395)||(39434514-39434674)
chr8 (236-391)||(42659073-42659230)
chr8 (255-395)||(38815159-38815301)
chr8 (251-393)||(22589438-22589582)
chr8 (275-395)||(37514106-37514228)
chr8 (298-395)||(3187878-3187976)
chr8 (251-395)||(18804474-18804619)
chr8 (251-337)||(18596759-18596845)
chr8 (248-319)||(44337198-44337268)
chr8 (394-447)||(8619886-8619939)
chr8 (314-395)||(3821148-3821231)
chr8 (259-382)||(25021927-25022052)
chr8 (282-359)||(8882236-8882313)
chr8 (282-342)||(24320229-24320289)
chr8 (251-342)||(8619683-8619774)
chr8 (256-339)||(24350880-24350963)
chr8 (293-359)||(6592479-6592545)
chr8 (389-447)||(39434734-39434792)
chr8 (235-283)||(25326159-25326207)
chr8 (251-342)||(500103-500194)
chr8 (303-346)||(8540531-8540574)
chr8 (251-395)||(24124889-24125035)
chr8 (389-447)||(500294-500352)
chr8 (282-352)||(4699763-4699833)
chr8 (293-359)||(6792172-6792238)
chr8 (304-342)||(9259447-9259485)
chr8 (278-373)||(24451010-24451105)
chr8 (389-447)||(35739968-35740026)
chr8 (250-319)||(15566139-15566208)
chr8 (394-447)||(42922109-42922162)
chr8 (389-453)||(6592642-6592706)
chr8 (283-359)||(6618178-6618254)
[»] chr6 (22 HSPs)
chr6 (237-395)||(17249405-17249565)
chr6 (242-395)||(33220811-33220966)
chr6 (248-395)||(357816-357965)
chr6 (236-342)||(7749327-7749433)
chr6 (281-395)||(32115609-32115725)
chr6 (293-395)||(34304399-34304503)
chr6 (256-380)||(3137362-3137488)
chr6 (286-342)||(28625827-28625883)
chr6 (251-342)||(34168782-34168872)
chr6 (302-382)||(959493-959575)
chr6 (303-402)||(13398275-13398376)
chr6 (256-382)||(28009100-28009228)
chr6 (251-302)||(45816-45867)
chr6 (236-303)||(32531042-32531109)
chr6 (389-447)||(24016404-24016462)
chr6 (263-324)||(749501-749562)
chr6 (305-395)||(4166022-4166114)
chr6 (305-395)||(4206696-4206788)
chr6 (297-338)||(34554435-34554476)
chr6 (403-447)||(3714998-3715042)
chr6 (394-454)||(28543447-28543507)
chr6 (282-395)||(29338179-29338294)
[»] chr1 (39 HSPs)
chr1 (237-395)||(34644413-34644573)
chr1 (237-355)||(5453942-5454060)
chr1 (242-395)||(48841182-48841337)
chr1 (283-395)||(2764372-2764486)
chr1 (235-395)||(47459528-47459689)
chr1 (251-395)||(22346756-22346902)
chr1 (251-395)||(24177611-24177757)
chr1 (251-351)||(28493477-28493577)
chr1 (251-338)||(868560-868647)
chr1 (251-342)||(1114023-1114114)
chr1 (283-395)||(2898595-2898709)
chr1 (251-395)||(21472864-21473010)
chr1 (275-395)||(28041227-28041349)
chr1 (251-342)||(30688418-30688509)
chr1 (251-337)||(19035340-19035426)
chr1 (251-402)||(31737416-31737568)
chr1 (396-449)||(4861969-4862022)
chr1 (275-359)||(4611074-4611158)
chr1 (282-395)||(20259897-20260012)
chr1 (251-330)||(7213104-7213183)
chr1 (253-395)||(4862089-4862234)
chr1 (264-325)||(31742485-31742546)
chr1 (389-437)||(21473070-21473118)
chr1 (303-342)||(45835341-45835380)
chr1 (394-436)||(36486958-36487000)
chr1 (256-337)||(35387809-35387890)
chr1 (287-342)||(7483781-7483836)
chr1 (271-338)||(21934258-21934325)
chr1 (389-447)||(19035514-19035572)
chr1 (389-447)||(22346962-22347020)
chr1 (389-447)||(34644633-34644691)
chr1 (389-447)||(50161399-50161457)
chr1 (389-454)||(2764546-2764611)
chr1 (282-347)||(17077966-17078031)
chr1 (394-447)||(37932200-37932252)
chr1 (251-392)||(6670208-6670351)
chr1 (389-445)||(29169777-29169833)
chr1 (304-348)||(45057585-45057629)
chr1 (389-449)||(45659628-45659688)
[»] chr5 (31 HSPs)
chr5 (237-395)||(35310295-35310455)
chr5 (242-395)||(430454-430609)
chr5 (248-395)||(13167010-13167159)
chr5 (248-395)||(33692155-33692301)
chr5 (242-395)||(25663132-25663287)
chr5 (235-377)||(27336540-27336684)
chr5 (282-395)||(2566195-2566310)
chr5 (242-319)||(2917539-2917616)
chr5 (251-395)||(42921559-42921704)
chr5 (255-382)||(23023460-23023589)
chr5 (248-382)||(32269910-32270045)
chr5 (389-446)||(35456023-35456080)
chr5 (297-395)||(22188755-22188855)
chr5 (294-395)||(37873738-37873841)
chr5 (389-436)||(8100619-8100666)
chr5 (388-447)||(27336759-27336818)
chr5 (275-337)||(11005763-11005825)
chr5 (263-357)||(15292165-15292259)
chr5 (389-447)||(37873620-37873678)
chr5 (294-370)||(14423591-14423667)
chr5 (282-342)||(15506770-15506830)
chr5 (389-453)||(43129601-43129665)
chr5 (281-344)||(8100445-8100507)
chr5 (235-351)||(18176759-18176877)
chr5 (403-449)||(433373-433419)
chr5 (302-352)||(34475953-34476003)
chr5 (305-342)||(12033346-12033383)
chr5 (265-334)||(23092694-23092763)
chr5 (285-338)||(23424030-23424083)
chr5 (389-437)||(8858983-8859031)
chr5 (389-425)||(43115461-43115497)
[»] chr2 (38 HSPs)
chr2 (236-395)||(28224846-28225007)
chr2 (251-395)||(17344499-17344645)
chr2 (244-381)||(27494165-27494304)
chr2 (251-395)||(4413166-4413312)
chr2 (251-395)||(13413212-13413358)
chr2 (275-395)||(9685515-9685637)
chr2 (251-395)||(41868008-41868153)
chr2 (297-395)||(27502269-27502369)
chr2 (251-335)||(3208406-3208490)
chr2 (251-342)||(2626002-2626093)
chr2 (163-231)||(27585526-27585594)
chr2 (304-395)||(16351944-16352037)
chr2 (251-325)||(41702133-41702207)
chr2 (251-308)||(10587144-10587201)
chr2 (251-336)||(42122678-42122763)
chr2 (251-331)||(30602350-30602430)
chr2 (251-342)||(18745109-18745200)
chr2 (163-232)||(2224047-2224116)
chr2 (235-304)||(38723985-38724054)
chr2 (282-342)||(15515302-15515362)
chr2 (322-395)||(44686348-44686423)
chr2 (265-352)||(11921349-11921436)
chr2 (389-447)||(4413048-4413106)
chr2 (275-393)||(19161885-19162005)
chr2 (389-454)||(41867883-41867948)
chr2 (263-319)||(20143123-20143179)
chr2 (495-526)||(2224176-2224207)
chr2 (303-346)||(3825639-3825682)
chr2 (394-437)||(13147089-13147132)
chr2 (388-447)||(16351823-16351882)
chr2 (275-395)||(32029186-32029308)
chr2 (389-447)||(5532486-5532544)
chr2 (292-395)||(7760945-7761050)
chr2 (275-393)||(23485038-23485159)
chr2 (256-293)||(19514202-19514239)
chr2 (295-352)||(26407839-26407896)
chr2 (495-535)||(27585425-27585465)
chr2 (235-331)||(34250153-34250249)
[»] scaffold0009 (1 HSPs)
scaffold0009 (251-395)||(102967-103113)
[»] scaffold0309 (1 HSPs)
scaffold0309 (251-343)||(5185-5277)
[»] scaffold0406 (1 HSPs)
scaffold0406 (256-346)||(6754-6844)
[»] scaffold0198 (2 HSPs)
scaffold0198 (163-231)||(18421-18489)
scaffold0198 (495-535)||(18550-18590)
[»] scaffold0148 (1 HSPs)
scaffold0148 (251-395)||(33111-33257)
[»] scaffold0031 (1 HSPs)
scaffold0031 (282-392)||(49307-49419)
[»] scaffold0361 (1 HSPs)
scaffold0361 (306-382)||(17392-17468)
[»] scaffold0490 (1 HSPs)
scaffold0490 (389-447)||(6401-6459)
[»] scaffold0110 (2 HSPs)
scaffold0110 (251-342)||(47675-47766)
scaffold0110 (397-447)||(47521-47571)
[»] scaffold0186 (1 HSPs)
scaffold0186 (394-456)||(10436-10498)
[»] scaffold0244 (1 HSPs)
scaffold0244 (294-342)||(16809-16857)
[»] scaffold0514 (1 HSPs)
scaffold0514 (293-359)||(4385-4451)
[»] scaffold1768 (1 HSPs)
scaffold1768 (250-339)||(342-431)
[»] scaffold0470 (1 HSPs)
scaffold0470 (283-359)||(7496-7572)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 1249358 - 1249620
Alignment:
Q  8 gtttatgcatggagttaagagaaatgcaatctaattataattagtatggatagtctacatgttttaagtacgttctcatcttcttaagtattattacatg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  1249358 gtttatgcatggagttaagagaaatgcaatctaattataattagtatggatagtcta--tgttttaagtacgttctcatcttcttaagtattattacatg 1249455  T
Q  108 cgtgaatgaaactgcttgatcagtccataaccaatagcaattattatttcagaactgctatatatcacgattaaatacttcacgaataaatcatgaatca 207  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1249456 cgtgaatgaaacttcttgatcagtccataaccaatagcatttattatttcagaactgctatatatcacgattaaatactttacgaataaatcatgaatca 1249555  T
Q  208 catgtattccatagttgttaaccataaaatattaactattaatattacttacacatgaataggag 272  Q
    ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||    
T  1249556 catatattccatagttgttaaccataaaatatttactatcaatattacttacatataaataggag 1249620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 354 - 540
Target Start/End: Original strand, 1249618 - 1249811
Alignment:
Q  354 gagacaacattgttatgcataaccctttggactctatgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactg 453  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||| ||  ||||| | |||    
T  1249618 gagacaacattgttatgcataaccctttggactctatgtggattatcaaaacacgctttctcatgtttgaccactttatttgacgcaggttttagggctg 1249717  T
Q  454 ctta-------gtaaaagtctcaaccttccgtgtaactttcaatgtaaatattcacttttattttgtccctcgtgcaacagacttagtttaaac 540  Q
      ||       ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1249718 tctatcctaccgtaaaagtctcaaccttccatgtaacattctatgtaaatattcacttttattttgtccctcgtgcaacagacttagtttaaac 1249811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 249 - 385
Target Start/End: Complemental strand, 45003145 - 45003007
Alignment:
Q  249 atattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgta 348  Q
    ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  45003145 atattacttacacatgaataggaggcaagcggacaataagctgcgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacattcatggt 45003046  T
Q  349 cctaagagac--aacattgttatgcataaccctttggac 385  Q
    |||| |||||  ||||||| |||||||||| ||||||||    
T  45003045 cctatgagacataacattgctatgcataactctttggac 45003007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 237 - 395
Target Start/End: Complemental strand, 28517547 - 28517387
Alignment:
Q  237 tattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||| ||||| |||||||||||||||||||||||||| |  ||| |||||||||  | |||||||| |||||||||||||||| ||||| ||||||||||    
T  28517547 tatttactatcaatattacttacacatgaataggaggcagacgggcaacaagctgtgtcgctagacttttttggatggcaaaaccaatcctcgtaaacac 28517448  T
Q  337 aacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||| ||| || || |||||  |||||||||||||||||||||||||||||||||||||    
T  28517447 aacattcatggacttaggagacataacattgttatgcataaccctttggactctatgtaga 28517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 40726725 - 40726580
Alignment:
Q  252 ttacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacct 351  Q
    |||||||||||||||||||||| |||||| ||||||||| ||  | ||||| |||||||||||||||||||||| || ||||||||||||| ||| | ||    
T  40726725 ttacttacacatgaataggaggcaagcgggcaacaagctgcgatgttagacatttttggatggcaaaatcaatcctcataaacacaacattcatggatct 40726626  T
Q  352 aagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    | |||||  | |||||||||||||||||||||||||||||||||||    
T  40726625 aggagacatagcattgttatgcataaccctttggactctatgtaga 40726580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 395
Target Start/End: Original strand, 5825120 - 5825280
Alignment:
Q  237 tattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||||||||| |||||| ||||||||||||||||||| |||| |  |||||||| |||||  |||||||||| |||||||||| ||||| ||||||||||    
T  5825120 tattaactatcaatatttcttacacatgaataggaggcaagcaggtaacaagctgcgccgtaagacctttttcgatggcaaaaccaatcctcgtaaacac 5825219  T
Q  337 aacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||  ||  ||||| |||||  ||||||| ||||||||||||||| |||||||||||||    
T  5825220 aacatccatagacctaggagacataacattgctatgcataaccctttcgactctatgtaga 5825280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 251 - 393
Target Start/End: Complemental strand, 21327084 - 21326940
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||||| ||| |||    
T  21327084 attatttacacttgaatagaaggcaagcagacaacaagctgcgccgttagacctttttggatggcaaaatcaatcctcgtgaacacaacattcatggacc 21326985  T
Q  351 taagagac--aacattgttatgcataaccctttggactctatgta 393  Q
    || |||||  ||||||| ||||||| ||| |||| ||||||||||    
T  21326984 taggagacataacattgctatgcatgaccttttgaactctatgta 21326940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 395
Target Start/End: Complemental strand, 45614076 - 45613942
Alignment:
Q  263 tgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagaga--caa 360  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||| ||| ||||| ||||    |    
T  45614076 tgaatagaaggcaagcggacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagatttga 45613977  T
Q  361 cattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||||| | | |||| ||||||||||||    
T  45613976 cattgttatgcatgaacttttgaactctatgtaga 45613942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 38766176 - 38766258
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaat 324  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||||||| ||||    
T  38766176 actatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgcagctagacctttttggatggcaaaaccaat 38766258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 38832154 - 38832225
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatg 313  Q
    ||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  38832154 actatcaatattacttacatatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatg 38832225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 48539094 - 48539188
Alignment:
Q  303 ctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||| ||||| ||||||  |||||| ||||||| ||| |||||||||||||||||    
T  48539094 ctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccttttggactctatgtaga 48539188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 395
Target Start/End: Original strand, 19277164 - 19277300
Alignment:
Q  263 tgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttc--gtaaacacaacatttatgtacctaagagaca- 359  Q
    ||||||| ||| | |||| ||| ||||| |||||||||||||||||||||||||||| |||| |||  || ||||||||||| ||| ||||| ||||||     
T  19277164 tgaatagaaggcaggcgggcaataagctgcgccgctagacctttttggatggcaaaaccaattttcgtgtgaacacaacattcatggacctaggagacat 19277263  T
Q  360 -acattgttatgcataaccctttggactctatgtaga 395  Q
     |||||| ||||||| ||| |||| ||||||||||||    
T  19277264 gacattgctatgcatgaccttttgaactctatgtaga 19277300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 45974845 - 45974737
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||  |||||||||||||||| |||| ||||||||||||||||| ||||||  ||| | |||||||||||||| ||| |||    
T  45974845 attatttacacttgaatagaagacaagcggacaacaagctgcgccactagacctttttggatgacaaaatttatccttgtaaacacaacattcatgaacc 45974746  T
Q  351 taagagaca 359  Q
    || ||||||    
T  45974745 taggagaca 45974737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 25187177 - 25187031
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||| ||||||||| |||||||||| |||||| ||||| |||||||||| | |  ||||||||||| ||| | |    
T  25187177 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagatctttttagatggtaaaatcaatcattgggaacacaacattcatggatc 25187078  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| ||| |||| ||||||| ||||    
T  25187077 taggagacatgacattgctatgcatgaccttttgaactctatataga 25187031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 36931963 - 36931887
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatg 313  Q
    ||||| ||||| ||||||||||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||||    
T  36931963 atatttactatcaatattacttacatatgaataggaggcaagcggataacaagctgcgccgctaga-ctttttggatg 36931887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 23037457 - 23037559
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtagattgt 399  Q
    ||||||| |||||||||||||||| |||||||||||| ||| ||  |||||||||| |  |||||| |||||||||||||||| || ||| |||||| ||    
T  23037457 cctttttagatggcaaaatcaatcctcgtaaacacaaaattcatagacctaagagaaatgacattgctatgcataaccctttgaaccctacgtagatggt 23037556  T
Q  400 caa 402  Q
    |||    
T  23037557 caa 23037559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 27521385 - 27521478
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| |||||||||||||||| |||||||||||||||| ||  || || ||||||  |||||||||||||| ||| |||| ||||||||||||    
T  27521385 tttttcgatggcaaaatcaatcctcgtaaacacaacattcatagacttaggagacatgacattgttatgcatgaccttttgaactctatgtaga 27521478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 982841 - 982956
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccct 379  Q
    |||||||||  | ||||||||||||||||||||||| | ||||| |||| ||||||||||| ||| || ||  |||||  |||||| ||||||| ||| |    
T  982841 caacaagctgtgtcgctagacctttttggatggcaataccaatcctcgtgaacacaacattcatggacatagaagacatgacattgatatgcatgacctt 982940  T
Q  380 ttggactctatgtaga 395  Q
    ||| ||||||||||||    
T  982941 ttgaactctatgtaga 982956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 27027844 - 27027768
Alignment:
Q  283 aacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    |||||||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| ||||||    
T  27027844 aacaagctacaccgctagatctttttggatagcaaaaccaatcctcgtgaacacaacattcatggacctaggagaca 27027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 30216098 - 30216038
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaag 449  Q
    |||| |||||||||||||||||||||||| |||||||||||| |||||| || ||||||||    
T  30216098 atgttgattgtcaaaacacgctttctcatatttgaccattttgcttgacgcagcttttaag 30216038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 4501120 - 4501266
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||  ||| |||||||||| ||| | ||| ||||||||||||| |||| ||||   |||| |||||||||||||||| ||| | |    
T  4501120 attatttacacttgaatataaggcaagcggacaataagatgcgctgctagacctttttagatgacaaagctaatcctcgtaaacacaacattcatgaatc 4501219  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| | | |||| ||||||||||||    
T  4501220 taggagacatgacattgctatgcatgaacttttgaactctatgtaga 4501266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 24527482 - 24527596
Alignment:
Q  283 aacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctt 380  Q
    |||||||| |||||||||| ||||||||||| ||||| ||||| |||| || |||||||| ||| ||| | |||| |  |||||| ||||||| ||| ||    
T  24527482 aacaagctgcgccgctagatctttttggatgacaaaaccaatcctcgtgaatacaacattcatggaccaaggagaaatgacattgctatgcatgaccttt 24527581  T
Q  381 tggactctatgtaga 395  Q
    || ||||||||||||    
T  24527582 tgaactctatgtaga 24527596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 43856788 - 43856881
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||| |||||||||||  ||||||||| |||||| ||| ||||| ||| ||  |||||||| ||||| |||||||| ||||||||||||    
T  43856788 tttttggatagcaaaatcaattctcgtaaacataacattcatggacctaggagtcatgacattgttgtgcatgaccctttgaactctatgtaga 43856881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 403 - 447
Target Start/End: Complemental strand, 25186962 - 25186918
Alignment:
Q  403 aacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||    
T  25186962 aacacgctttctcatgttagaccactttacttgacacaactttta 25186918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 2904242 - 2904332
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||||||||||| ||  |  | |||||||||||||||| ||| |||||||||||| |||||| ||||  ||||||||||||||||    
T  2904242 attaattacacatgaatagaagacatacagacaacaagctacgccacta-acctttttggatagcaaaaccaattatcgtaaacacaacatt 2904332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 10904979 - 10905125
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||||||||||| | | ||| ||  |||||||| |||  ||||  ||||||||||||  | ||||||| | |||||||| ||||| ||| |||    
T  10904979 attatttacacatgaatagaatgcaagagggtaacaagctgcgctactaggtctttttggatggtcagatcaatccttgtaaacacgacattcatggacc 10905078  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  ||||||||||||||  | ||||| ||||||||||||    
T  10905079 taggagacatgacattgttatgcatggctctttgaactctatgtaga 10905125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 32584485 - 32584552
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||||| | ||||| | ||| ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  32584485 aagcgggcgacaagttgcgctgctaggcctttttggatggtaaaatcaatctttgtaaacacaacatt 32584552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 38839234 - 38839311
Alignment:
Q  298 tagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcat 373  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||| ||| |||| | | |||  ||||||||||||||    
T  38839234 tagacatttttggatggtaaaaccaatcttcgtaaacacaacattcatggacctgataaacatgacattgttatgcat 38839311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 41117975 - 41117870
Alignment:
Q  292 cgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactcta 389  Q
    ||||||| ||| ||||||||| |||||||||||| |||| ||||||||||| ||| ||||| || |||  |||||| ||||||| | | |||  ||||||    
T  41117975 cgccgctggacttttttggatagcaaaatcaatcatcgtgaacacaacattcatggacctaggaaacatgacattgctatgcatgatcttttaaactcta 41117876  T
Q  390 tgtaga 395  Q
    ||||||    
T  41117875 tgtaga 41117870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 2520967 - 2520918
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctag 300  Q
    |||| |||||||||||||| ||| |||||||||||||||| |||||||||    
T  2520967 attaattacacatgaatagaaggcaagcggacaacaagctgcgccgctag 2520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 370
Target Start/End: Original strand, 5714954 - 5715022
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac--aacattgttatg 370  Q
    ||||| |||| ||||| |||||||| ||||||||||||||||| ||||| |||||  ||||||||||||    
T  5714954 tttttagatgacaaaaccaatcttcataaacacaacatttatggacctaggagacataacattgttatg 5715022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 32336318 - 32336359
Alignment:
Q  301 acctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  32336318 acctttttggatggcaaaatcaatctttgtgaacacaacatt 32336359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 395
Target Start/End: Original strand, 22197899 - 22197993
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||||||| ||||||||||  |||||||||||||||| ||  ||||| ||||||  || ||| ||| ||||||| |||| ||||||||||||    
T  22197899 cctttttggatgacaaaatcaattatcgtaaacacaacattcattgacctaggagacatgacgttgctat-cataaccttttgaactctatgtaga 22197993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 22239922 - 22239828
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||||||| ||||||||||  |||||||||||||||| ||  ||||| ||||||  || ||| ||| ||||||| |||| ||||||||||||    
T  22239922 cctttttggatgacaaaatcaattatcgtaaacacaacattcattgacctaggagacatgacgttgctat-cataaccttttgaactctatgtaga 22239828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 41071800 - 41071756
Alignment:
Q  298 tagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||    
T  41071800 tagatctttttggatgacaaaatcaatcttcgtaaacataacatt 41071756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 34856750 - 34856813
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    ||||||| || ||| | ||||||||||||||||| |||| ||||||||||||  ||||||||||    
T  34856750 aagcggataataagttgcgccgctagacctttttagatgacaaaatcaatctcagtaaacacaa 34856813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 24567002 - 24566960
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttga 436  Q
    ||||||| |||||| |||||||||||||||||| |||||||||    
T  24567002 gattgtctaaacaccctttctcatgtttgaccactttacttga 24566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 28517327 - 28517269
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| ||||||| ||||||||||||||||||||| ||| ||| |||||| || ||||||    
T  28517327 atgttgattgtctaaacacgctttctcatgtttggccactttgcttgacgcagctttta 28517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 9281382 - 9281277
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| ||||| |||||||  |||||||| |||||||| || | ||| ||  ||||||||||| |||||| ||||  || ||||||||||||| ||| ||     
T  9281382 attaattacatatgaatataaggtaagcagacaacaaactgcaccgttaagcctttttggattgcaaaaccaattctcctaaacacaacattaatggact 9281283  T
Q  351 taagag 356  Q
    ||||||    
T  9281282 taagag 9281277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 9292353 - 9292248
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| ||||| |||||||  |||||||| |||||||| || | ||| ||  ||||||||||| |||||| ||||  || ||||||||||||| ||| ||     
T  9292353 attaattacatatgaatataaggtaagcagacaacaaactgcaccgttaagcctttttggattgcaaaaccaattctcctaaacacaacattaatggact 9292254  T
Q  351 taagag 356  Q
    ||||||    
T  9292253 taagag 9292248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 454
Target Start/End: Original strand, 19277360 - 19277425
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactgc 454  Q
    |||| |||||||| |||||||||||||||||||| | | ||| |||||| || |||||| ||||||    
T  19277360 atgttgattgtcagaacacgctttctcatgtttggctactttgcttgacgcagcttttaggactgc 19277425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 453
Target Start/End: Original strand, 2904432 - 2904496
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactg 453  Q
    |||| |||||||  |||| ||||||||||||||||| ||||| ||||||  |||||||| |||||    
T  2904432 atgttgattgtcggaacatgctttctcatgtttgactattttgcttgacgtaacttttaggactg 2904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 21326878 - 21326830
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgac 437  Q
    |||| |||||||| |||||||||||||||||||| ||| ||| ||||||    
T  21326878 atgttgattgtcagaacacgctttctcatgtttggccactttgcttgac 21326830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 27521538 - 27521598
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaag 449  Q
    |||| |||||||| |||||| ||||||||||||||||| |||  || || |||||||||||    
T  27521538 atgttgattgtcagaacacgttttctcatgtttgaccactttgtttaacgcaacttttaag 27521598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 236 - 395
Target Start/End: Complemental strand, 50001187 - 50001026
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  50001187 atatttactattaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagatctttttggatggcaaaatcaatcttcgtaaaca 50001088  T
Q  336 caacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||| | ||| |||||  ||||||| |||||||||||||||||||| ||||||||    
T  50001087 caacatttatggatctaggagacataacattgctatgcataaccctttggactatatgtaga 50001026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 235 - 395
Target Start/End: Original strand, 53619431 - 53619593
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac 334  Q
    |||||| ||||| ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||| ||||  ||||||||    
T  53619431 aatatttactatcaatattacttacacatgaataggaggtaagtaggcaacaagctgcgccgctagacctttttggatggcaaaaccaattctcgtaaac 53619530  T
Q  335 acaacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||| ||| |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  53619531 acaacattcatggacctaagagacataacattgttatgcataaccctttagactctatgtaga 53619593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 233 - 395
Target Start/End: Original strand, 23255556 - 23255720
Alignment:
Q  233 aaaatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaa 332  Q
    |||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||    
T  23255556 aaaatatttactatcaatattactcacatatgaataggaggtaagcggacaacaagctgcgccgctagacttttctggatggcaaaatcaatcctcgtaa 23255655  T
Q  333 acacaacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||| ||| ||| || || |||||  |||||||||||||||||||||||||||||||||||||    
T  23255656 acacaatattcatggacttaggagacataacattgttatgcataaccctttggactctatgtaga 23255720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 236 - 395
Target Start/End: Original strand, 3329842 - 3330003
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| ||||| |||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  3329842 atatttactatcaatattacttacacgtgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcatcgtaaaca 3329941  T
Q  336 caacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    || |||| ||| ||||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  3329942 cagcattcatggacctaggagacataacattgctatgcataaccctttggactctatgtaga 3330003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 253 - 395
Target Start/End: Original strand, 39001260 - 39001404
Alignment:
Q  253 tacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    ||||||||||||||||||||| |||||| |||||| || |||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||| |||||    
T  39001260 tacttacacatgaataggaggcaagcgggcaacaaactgcgccgctagacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta 39001359  T
Q  353 --agagacaacattgttatgcataaccctttggactctatgtaga 395  Q
      ||| ||||||||||||||||||| |||||||||||||||||||    
T  39001360 ggagacacaacattgttatgcataatcctttggactctatgtaga 39001404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 4419120 - 4419270
Alignment:
Q  246 ttaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttat 345  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||  |||||||||||||||| ||||| |||||||||||||||| ||    
T  4419120 ttaatattacttgcacatgaataggaggcaagcgggcaacaagctgcgccgctaga-ttttttggatggcaaaaccaatcatcgtaaacacaacattcat 4419218  T
Q  346 gtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    | ||||| |||||  |||||||||||||||||||||||| ||||||||||||    
T  4419219 ggacctaggagacataacattgttatgcataaccctttgaactctatgtaga 4419270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 248 - 395
Target Start/End: Complemental strand, 55933709 - 55933560
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgt 347  Q
    |||||||||| ||||||||||||||| ||||||||||||| || || |||||||| |||||||||||||||||||||| |||||||||||||||| | |     
T  55933709 aatattacttgcacatgaataggaggcaagcggacaacaaactgcgtcgctagacttttttggatggcaaaatcaatcatcgtaaacacaacattcacgg 55933610  T
Q  348 acctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| |||||  || ||||||||| ||||||||||||||||||||||||    
T  55933609 acctaggagacataatattgttatgtataaccctttggactctatgtaga 55933560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 48657168 - 48657015
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacat 341  Q
    ||||| ||||||||||| |||||||||||||  |||| | |||||||| ||  | ||||| ||||||||| ||||||||||||| |||||||||||||||    
T  48657168 actatcaatattacttatacatgaataggagccaagcaggcaacaagccac--cactagatctttttggacggcaaaatcaatcatcgtaaacacaacat 48657071  T
Q  342 ttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    | ||  ||||| |||||  ||||||| ||||||||| | |||||||||||||||||    
T  48657070 tcatagacctatgagacataacattgctatgcataatcatttggactctatgtaga 48657015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 600938 - 600792
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||  |||| ||||||||||| |||| ||| |||    
T  600938 attatttacacttgaatagaaggcaagcggacaacaagctacgtcgctatacatttttggatggcaaaactaatcatcgtaaacacagcattaatggacc 600839  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||| ||||| ||| ||| |||| ||||||||||||    
T  600838 taggagacatgacatagttatacatgaccttttgaactctatgtaga 600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 30940978 - 30940832
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||| ||||||||| || ||||||||||||||||||||||||||||||| || | ||||||||||| ||  |||    
T  30940978 attatttacacttgaatagaaggcaagcgggcaacaagctgcgtcgctagacctttttggatggcaaaatcaatcctcatgaacacaacattcatagacc 30940879  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || || | |  |||||||||||||| ||| |||| ||||||||||||    
T  30940878 taggatatatgacattgttatgcatgaccttttgaactctatgtaga 30940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 31846962 - 31847071
Alignment:
Q  249 atattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgta 348  Q
    ||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||| ||  |||| |||  ||||||||||| ||| |    
T  31846962 atattacttacacatgaataggaggcaagcgggcaacaacctgcgccgctagacctttttggatggcataacgaatcctcgctaacacaacattcatgga 31847061  T
Q  349 cctaagagac 358  Q
    |||| |||||    
T  31847062 cctaggagac 31847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 256 - 382
Target Start/End: Original strand, 8738071 - 8738199
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaaga 355  Q
    ||||||||||||   ||||||||||| ||||| || |||||||| || |||||||||| ||||||||||||| ||| |||||||||| ||| ||||||||    
T  8738071 ttacacatgaatgaaaggtaagcggataacaaactgcgccgctaaacttttttggatgacaaaatcaatctttgtatacacaacattcatgaacctaaga 8738170  T
Q  356 gaca--acattgttatgcataaccctttg 382  Q
    ||||  ||||| |||||||| | ||||||    
T  8738171 gacatgacatttttatgcatgagcctttg 8738199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 395
Target Start/End: Complemental strand, 50464528 - 50464396
Alignment:
Q  265 aataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--aca 362  Q
    ||||| ||| |||||||||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||||||| || ||  |  ||||||  |||    
T  50464528 aatagaaggcaagcggacaacaagctgcgccgctaggtctttttggatggcaaaataaatcctcgtaaacacaacattcatatatttgggagacatgaca 50464429  T
Q  363 ttgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||| |||||||  |||||| |||||    
T  50464428 ttgttatgcatgaccctttaaactctacgtaga 50464396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 251 - 341
Target Start/End: Original strand, 26521350 - 26521440
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacat 341  Q
    |||||||||||||| |||| ||| |||||||||| |||||  ||||||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  26521350 attacttacacatggatagaaggcaagcggacaaaaagctgtgccgctaaacctttttggatgacaaaaccaatcctcgtaaacacaacat 26521440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 40392800 - 40392726
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatc 325  Q
    |||| |||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  40392800 attatttacacttgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaaccaatc 40392726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 16955321 - 16955467
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||| ||| ||| ||||||||||||| || || ||   || |||||| |||||| ||||||||| |||||||||||||||| |||  ||    
T  16955321 attatttacacttgagtagaaggcaagcggacaacaaactgcgtcgtcggatcttttttgatggccaaatcaatcctcgtaaacacaacattcatgggcc 16955420  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| ||| |||| ||||||||||||    
T  16955421 taggagacatgacattgctatgcatgaccttttgaactctatgtaga 16955467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 293 - 381
Target Start/End: Original strand, 23242803 - 23242893
Alignment:
Q  293 gccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataacccttt 381  Q
    |||| |||| ||||||||||  ||||||||||| |||||||||||| ||||||| |||||||||| |  |||||||||||||| |||||||    
T  23242803 gccgttagagctttttggataacaaaatcaatcatcgtaaacacaatatttatggacctaagagaaatgacattgttatgcatgacccttt 23242893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 47585255 - 47585160
Alignment:
Q  250 tattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttat 345  Q
    ||||| |||||  ||||||| ||| || | |||||||| ||||||||||| |||||||| |||| ||||| |||||||||||||||||| ||||||    
T  47585255 tattatttacatttgaatagaaggcaaacagacaacaaactacgccgctaaacctttttagatgacaaaaccaatcttcgtaaacacaaaatttat 47585160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 12053329 - 12053415
Alignment:
Q  252 ttacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    |||||||||||||||||| ||| |||| ||||||||||| || |||| | ||||||| |||||||||| ||||  ||||||||||||    
T  12053329 ttacttacacatgaatagaaggcaagcagacaacaagctgcgtcgctcggcctttttcgatggcaaaaccaattctcgtaaacacaa 12053415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 23604951 - 23605025
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatc 325  Q
    |||| |||||||||||||| ||  || ||||||||||| | |||||||||||||||||||||| |||||||||||    
T  23604951 attatttacacatgaatagaagacaaccggacaacaagttgcgccgctagacctttttggatgacaaaatcaatc 23605025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 30940779 - 30940721
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  30940779 atgttgattgtcagaacacgctttctcatgtttgaccactttacttgacgcaactttta 30940721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 395
Target Start/End: Complemental strand, 46441150 - 46440989
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| ||||| | ||||||||||| ||||||| |||  |||||| | ||||| ||||  |||| | |||||| |||| ||||||||||| ||||||| |    
T  46441150 atatttactatcagtattacttacaaatgaataagagacaagcgggcgacaagttacgatgctaaatctttttagatgacaaaatcaatcatcgtaaata 46441051  T
Q  336 caacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
     ||  || ||| ||||| |||||  | ||||| |||||| ||||||||||||||||||||||    
T  46441050 taattttcatgaacctatgagacatagcattgctatgcacaaccctttggactctatgtaga 46440989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 12917895 - 12917984
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatc 325  Q
    ||||| ||||| |||||||||||| |||||||| |||| |||| ||||| ||| |  |||| |||||||||||||||| |||||||||||    
T  12917895 atatttactatcaatattacttactcatgaataagaggcaagcagacaataagttgtgccgttagacctttttggatgacaaaatcaatc 12917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 41372322 - 41372253
Alignment:
Q  243 ctattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggat 312  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||| | ||| ||||||||||| |||||    
T  41372322 ctatcaatattacttacacatgaataggaggcaagcagacaacaagttgcgctgctagacctttgtggat 41372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 402
Target Start/End: Original strand, 132246 - 132399
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    ||||||||| ||||||||| ||| ||||||  |||||||| | ||| || |||||||| ||||  |||||| ||  | |||||||||||| | ||| |||    
T  132246 attacttacgcatgaatagaaggcaagcggggaacaagctgcaccgttatacctttttagatgataaaatcgattcttgtaaacacaacaatcatgaacc 132345  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtagattgtcaa 402  Q
    ||| |||||  |||||||||||| | |||||||  ||||| |||||| ||||||    
T  132346 taaaagacatgacattgttatgcttgaccctttaaactctgtgtagaatgtcaa 132399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 395
Target Start/End: Complemental strand, 34107944 - 34107796
Alignment:
Q  249 atattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgta 348  Q
    |||||| |||||| ||||||| |   ||| || |||||||||  |||| || || |||||||||| ||||| ||||| |||| ||||||||||| ||| |    
T  34107944 atattatttacacttgaatagaaaacaagtgggcaacaagctgtgccgttaaacttttttggatgacaaaaccaatcctcgtgaacacaacattcatgga 34107845  T
Q  349 cctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
     ||| |||||  ||||||||||||||| ||  |||| ||||||||||||    
T  34107844 tctaggagacataacattgttatgcatgactttttgaactctatgtaga 34107796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 298 - 392
Target Start/End: Complemental strand, 54191050 - 54190954
Alignment:
Q  298 tagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgt 392  Q
    |||| |||||||||| |||||| ||||||| ||||| |||| ||||||| || |||||| ||  ||||||||||||||  ||||||| |||||||||    
T  54191050 tagaactttttggatagcaaaaccaatctttgtaaatacaatatttatggacttaagagtcatgacattgttatgcatggccctttgaactctatgt 54190954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 1041310 - 1041386
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacct 351  Q
    |||||||||| ||||||||||| |||   ||||||||||| |||||||||| ||| |||||||||||| ||| ||||    
T  1041310 aagcggacaataagctacgccgttaggtttttttggatggtaaaatcaatcatcgaaaacacaacattcatgaacct 1041386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 50442701 - 50442617
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    |||||| ||||||||| |||| |||  |||||||||||||||||| ||||| || ||||||||||||  ||| ||||| ||||||    
T  50442701 aagcgggcaacaagctgcgccactaaccctttttggatggcaaaaccaatcctcttaaacacaacatccatgaacctaggagaca 50442617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 52403868 - 52403948
Alignment:
Q  315 caaaatcaatcttcgtaaacacaacatttatgtacctaagagacaacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| |||||||||||||||||||||||||  ||||||||||  | |||||| | ||| |||||||| ||| ||||||||    
T  52403868 caaaaccaatcttcgtaaacacaacatttataaacctaagagatgatattgttgtacatgaccctttgaactatatgtaga 52403948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 50463165 - 50463102
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    ||||||||| |||||| |||||||||  |||||||||||||||||  |||| ||||||||||||    
T  50463165 aagcggacagcaagctgcgccgctaggtctttttggatggcaaaacaaatcctcgtaaacacaa 50463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 50000965 - 50000907
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||||||| ||| |||||| || ||||||    
T  50000965 atgttgattgtcagaacacgctttctcatgtttgaccactttgcttgacgcagctttta 50000907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 395
Target Start/End: Original strand, 53170386 - 53170520
Alignment:
Q  263 tgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc--taagagaca- 359  Q
    ||||||| ||| |||| ||||||| ||| | | ||||||||||||| ||| |||||||||||| |||| ||||||||||| ||| |||  || ||||||     
T  53170386 tgaatagaaggcaagcagacaaca-gctgcactgctagacctttttagatagcaaaatcaatcctcgtgaacacaacattcatg-acctataggagacat 53170483  T
Q  360 -acattgttatgcataaccctttggactctatgtaga 395  Q
     |||||| ||||||| ||| |||| ||||||||||||    
T  53170484 gacattgctatgcatgaccttttgaactctatgtaga 53170520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 56462291 - 56462206
Alignment:
Q  312 tggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||| ||||  |||||||||||||||||||| || || ||||||  ||||||| |||||| | |||||| ||||||||||||    
T  56462291 tggcaaaaccaattctcgtaaacacaacatttatggacttaggagacatgacattgtcatgcatgatcctttgaactctatgtaga 56462206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 352
Target Start/End: Original strand, 9601095 - 9601171
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    |||||||||||||| | ||||| || | ||||||||||| ||||||||||| ||||||||||| || ||||| |||||    
T  9601095 aagcggacaacaagttgcgccgtta-agctttttggatgacaaaatcaatcctcgtaaacacaccacttatgaaccta 9601171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 23255777 - 23255828
Alignment:
Q  395 attgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttt 446  Q
    ||||||| |||||||||||||||||||| ||| ||| |||||| ||||||||    
T  23255777 attgtcagaacacgctttctcatgtttggccactttgcttgacgcaactttt 23255828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 35181763 - 35181834
Alignment:
Q  161 actgctatatatcacgattaaatacttcacgaataaatcatgaatcacatgtattccatagttgttaaccat 232  Q
    |||||||||||||||||||||| |||| | |||||||||| |||| |||| |||  | ||||| ||||||||    
T  35181763 actgctatatatcacgattaaaaactttaagaataaatcacgaattacatatatctcctagtttttaaccat 35181834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 352
Target Start/End: Complemental strand, 3698733 - 3698685
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    ||||| ||||||||||||||||||| |||||||||| || ||| |||||    
T  3698733 tttttagatggcaaaatcaatcttcataaacacaacgttcatgaaccta 3698685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 34213534 - 34213626
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca-acattgttatgcataaccctttggactctatgtaga 395  Q
    |||| ||||||||||| | ||| | |||||||||||||| ||| | ||| |||| | ||||||||| |||| |||||||| ||||||| ||||    
T  34213534 ttttcggatggcaaaaccgatccttgtaaacacaacattcatggaactaggagagacacattgttaggcatgaccctttgaactctatctaga 34213626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 45760875 - 45760839
Alignment:
Q  388 tatgtagattgtcaaaacacgctttctcatgtttgac 424  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  45760875 tatgttgattgtcaaaacacgctttctcatctttgac 45760839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 49354265 - 49354225
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||||||||| | ||||||||||| ||||||||||||||||    
T  49354265 cctttttggacgacaaaatcaatcatcgtaaacacaacatt 49354225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 235 - 395
Target Start/End: Original strand, 26772603 - 26772765
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac 334  Q
    |||||| | ||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26772603 aatatttattatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaac 26772702  T
Q  335 acaacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||| ||| ||||| |||||  ||||||||||||||||| |||||| ||||||| ||||    
T  26772703 acaacattcatggacctaggagacataacattgttatgcataatcctttgtactctatataga 26772765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 236 - 395
Target Start/End: Complemental strand, 38671141 - 38670980
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||| ||||| |||    
T  38671141 atatttactatcaatattatttacacataaataggaggtaagcggacaacaagctgcgccgctagacttttttagatggcaaaaccaatcctcgtacaca 38671042  T
Q  336 caacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||| ||| ||||| |||||  ||||||| |||||||||| |||| |||||||||||||    
T  38671041 caacattcatggacctaggagacataacattgctatgcataactctttagactctatgtaga 38670980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 251 - 391
Target Start/End: Complemental strand, 39583475 - 39583333
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    ||||||||||||||||||| | | |||| ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||    
T  39583475 attacttacacatgaatagaaagcaagcagacaacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacgacattcatgaacc 39583376  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatg 391  Q
    || ||||||  |||||| ||||||| |||||||| ||||||||    
T  39583375 taggagacatgacattgctatgcatgaccctttgaactctatg 39583333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 53785570 - 53785716
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||| ||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||| |||||| ||| |||    
T  53785570 attatttacacttgaatagaaggcaagcgggcaacaagctacgccgctggaccttgttggatggcaaaaccaatcctcgtaaacataacattcatggacc 53785669  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| ||| |||| ||||||||||||    
T  53785670 taggagacatgacattgctatgcatgaccttttgaactctatgtaga 53785716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 32546656 - 32546802
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| |||    
T  32546656 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacattcatggacc 32546755  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||  ||||||| ||  |||| ||||||||||||    
T  32546756 taggagacatgacattactatgcatgactttttgaactctatgtaga 32546802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 250 - 395
Target Start/End: Original strand, 44198627 - 44198774
Alignment:
Q  250 tattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtac 349  Q
    ||||| |||||| ||||||| ||| ||||||||||||||||  | ||||  ||||||||||||||||||||||||  ||| |||||||||||| ||| ||    
T  44198627 tattatttacacttgaatagaaggcaagcggacaacaagctgtgtcgctcaacctttttggatggcaaaatcaattatcgcaaacacaacattcatggac 44198726  T
Q  350 ctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||| ||||||  |||||| ||||||||||| | || ||||||||||||    
T  44198727 ctaggagacatgacattgctatgcataaccttctgaactctatgtaga 44198774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 13582415 - 13582517
Alignment:
Q  295 cgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgt 392  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| |||  |||| ||||||  |||||||||||||| ||| |||| ||||| |||    
T  13582415 cgctaggcctttttggatggctaaatcaatcttcgtaaacacaacattcatggtcctaggagacatgacattgttatgcatgaccttttgaactctctgt 13582514  T
Q  393 aga 395  Q
    |||    
T  13582515 aga 13582517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 275 - 352
Target Start/End: Original strand, 26276500 - 26276577
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||| ||| |||||    
T  26276500 aagcgggcaacaagctacaccgctagatctttttggatggcaaaatcaatcctcataaacacaacattcatggaccta 26276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 14959178 - 14959246
Alignment:
Q  163 tgctatatatcacgattaaatacttcacgaataaatcatgaatcacatgtattccatagttgttaacca 231  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||    
T  14959178 tgctatataccacgattaaatacttcaagaataaatcacgaatcacatatattccatagtttttaacca 14959246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 26856977 - 26856862
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccct 379  Q
    ||||||||| ||||||||| ||||||||||||| |||| ||||| ||| || ||||||||| ||  ||||| ||||||  |||||| ||||||| |||||    
T  26856977 caacaagctgcgccgctaggcctttttggatggtaaaaccaatcctcgcaagcacaacattcataaacctaggagacatgacattgctatgcatgaccct 26856878  T
Q  380 ttggactctatgtaga 395  Q
    ||| ||||||||||||    
T  26856877 ttgaactctatgtaga 26856862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 39491083 - 39491151
Alignment:
Q  163 tgctatatatcacgattaaatacttcacgaataaatcatgaatcacatgtattccatagttgttaacca 231  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||    
T  39491083 tgctatataccacgattaaatacttcaagaataaatcacgaatcacatatattccatagtttttaacca 39491151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 52412086 - 52411991
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||||||||||||||||||| | |||||||||| |||||||   ||| ||||||  |||||||||||||| |||||||| ||||||||||||    
T  52412086 cctttttggatggcaaaatcaatcattgtaaacacaatatttatgggtctaggagacatgacattgttatgcatgaccctttgaactctatgtaga 52411991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 46941019 - 46940873
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||||||||||| |||||| | | ||||||| | | |||||||  ||||||||||  |||||||||| ||||||||||||||||| ||| |||    
T  46941019 attaattacacatgaatagaaggtaaacaggcaacaagttgcaccgctaggtctttttggataacaaaatcaattttcgtaaacacaacattcatgaacc 46940920  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||| ||  |||||||  ||||| | |||||| ||||||||||||    
T  46940919 tatgagtcatgacattgtcgtgcatgatcctttgaactctatgtaga 46940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 50657235 - 50657320
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaa 333  Q
    ||||||||||||||||||||| |||  |||| |||||||| ||||| ||||||| ||||||| || |||||| |||||||||||||    
T  50657235 aatattacttacacatgaatatgagacaagctgacaacaaactacgtcgctagatctttttgaatagcaaaaccaatcttcgtaaa 50657320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 44694 - 44843
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac---acaacatttatgt 347  Q
    |||| |||||| ||||||| ||| |||||| |||||| || ||||||||||||||||||||||||||||  |||| | || |||   |||||||| |||     
T  44694 attatttacacttgaatagaaggcaagcgggcaacaaactgcgccgctagacctttttggatggcaaaacaaatccttgtgaacacaacaacattcatgg 44793  T
Q  348 acctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| || |||  |||||| ||||||| ||| |||| ||||||||||||    
T  44794 acctaggaaacatgacattgctatgcatgaccttttgaactctatgtaga 44843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 38145969 - 38146063
Alignment:
Q  303 ctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||| |||| ||||||||||| ||||||||||||| || ||| ||||| ||||||  |||||||||||||| |||||||| |||||| |||||    
T  38145969 ctttttagatgacaaaatcaatcatcgtaaacacaacgttcatggacctaggagacatgacattgttatgcatgaccctttgaactctaagtaga 38146063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 4669885 - 4669788
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatg 370  Q
    |||||| ||||||||| |||||| | ||||||||||||  ||||||||||| |||||||||||||||| ||| ||| | ||||||  |||||||||||    
T  4669885 aagcgggcaacaagctgcgccgccaaacctttttggataacaaaatcaatcatcgtaaacacaacattcatggaccaaggagacatgacattgttatg 4669788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 38978994 - 38978899
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||||||||||  ||| ||||||||||||||||| ||  ||||| ||||||  |||||||||||||| ||| |||| ||| ||||||||    
T  38978994 cctttttggatggcaaaactaattttcgtaaacacaacattgataaacctatgagacatgacattgttatgcatcaccttttgaactatatgtaga 38978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 250 - 342
Target Start/End: Original strand, 49017827 - 49017919
Alignment:
Q  250 tattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||| |||||| ||||||| ||| |||||||||||||||| | ||||     ||||||||||||||||||||||| || |||||||||||||    
T  49017827 tattatttacacttgaatagaaggcaagcggacaacaagctgcaccgccgatactttttggatggcaaaatcaatcctcataaacacaacatt 49017919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 4764038 - 4763893
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||| ||||||| | |||| | |  ||||||||||||||||    |||| |||||||||||||||| ||| |||    
T  4764038 attatttacacttgaatagaaggcaagcgggcaacaagttgcgccaccaagcctttttggatggcaattctaatcctcgtaaacacaacattcatggacc 4763939  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
     | ||||||  |||||| ||||||||||| |||| ||||||||||||    
T  4763938 -aggagacatgacattgctatgcataaccttttgaactctatgtaga 4763893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 37133217 - 37133099
Alignment:
Q  279 ggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataac 376  Q
    ||||||||| || ||||||||||||||||||||| |||||| ||||| |  ||||||||||||| ||  || || ||||||  |||||| ||||||| ||    
T  37133217 ggacaacaaactgcgccgctagacctttttggatcgcaaaaccaatccttataaacacaacattcattaacttaggagacatgacattgctatgcatgac 37133118  T
Q  377 cctttggactctatgtaga 395  Q
    | || | ||||||||||||    
T  37133117 ctttagaactctatgtaga 37133099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 52741758 - 52741612
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| |||  ||||| ||| ||| | || |||||||||||||||||||||||||  ||||||||| || |||| ||  ||| | |    
T  52741758 attatttacacttgaatagaaggcgagcgggcaataagttgcgtcgctagacctttttggatggcaaaacaaatcttcgtgaatacaagataaatggatc 52741659  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| ||| |||| ||||||||||||    
T  52741658 taggagacatgacattgctatgcatgaccttttgaactctatgtaga 52741612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 8592002 - 8592076
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatc 325  Q
    ||||||||||||||||||  ||| ||| ||  |||||||| ||||||| | ||||||||||||||||||||||||    
T  8592002 attacttacacatgaatataaggcaagtgggtaacaagctgcgccgctgggcctttttggatggcaaaatcaatc 8592076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 5338552 - 5338657
Alignment:
Q  296 gctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgta 393  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||   |  ||||| ||||||  |||||| || |||| ||| |||| ||||||||||    
T  5338552 gctagaccattttggatggcaaaaccaatcctcgtaaacacaacat---tcgacctatgagacaagacattgctacgcatgaccttttgaactctatgta 5338648  T
Q  394 gattgtcaa 402  Q
    || ||||||    
T  5338649 gaatgtcaa 5338657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 4472923 - 4473031
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    ||||||||||||||||||| ||  ||||||| |||||||||   |  ||||| |||||||||| ||||| ||||  |||||||||||| ||| ||  |||    
T  4472923 attacttacacatgaatagaagacaagcggataacaagctatatcattagacttttttggatgacaaaaccaattctcgtaaacacaatattcatagacc 4473022  T
Q  351 taagagaca 359  Q
    || ||||||    
T  4473023 taggagaca 4473031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 53502636 - 53502592
Alignment:
Q  315 caaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||    
T  53502636 caaaatcaattttcgtaaacacaacattcatgcacctaagagaca 53502592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 382
Target Start/End: Original strand, 3643014 - 3643145
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||||  ||||| ||| |||||| ||| ||||| || || ||| |||||| ||||| ||||||||||| ||  |||||||||||| ||| |||    
T  3643014 attaattacacaataatagaaggcaagcgggcaataagctgcgtcgttaggccttttcggatgacaaaatcaatcatc--aaacacaacattcatggacc 3643111  T
Q  351 taagagaca--acattgttatgcataaccctttg 382  Q
    ||| | |||  |||||||||||||| | ||||||    
T  3643112 taaaaaacatgacattgttatgcatgatcctttg 3643145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 438
Target Start/End: Complemental strand, 7502037 - 7502002
Alignment:
Q  403 aacacgctttctcatgtttgaccattttacttgaca 438  Q
    |||||||||||||||||||||||| |||||||||||    
T  7502037 aacacgctttctcatgtttgaccactttacttgaca 7502002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 436
Target Start/End: Complemental strand, 26856802 - 26856755
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttga 436  Q
    |||| |||||||| |||||||||| |||| ||||||||||||||||||    
T  26856802 atgttgattgtcacaacacgctttatcatatttgaccattttacttga 26856755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 26772825 - 26772883
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||| ||||| ||||||| ||| ||| ||||||||||||||||    
T  26772825 atgttgattgtcagaacacgttttctgatgtttggccactttgcttgacacaactttta 26772883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 39583269 - 39583211
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||| ||| ||| |||||| || ||||||    
T  39583269 atgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcagctttta 39583211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 44198834 - 44198892
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||| ||| |||||||||||||||||||| ||| ||| |||||| |||||||||    
T  44198834 atgttgattctcagaacacgctttctcatgtttggccactttgcttgacgcaactttta 44198892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 339
Target Start/End: Original strand, 2601689 - 2601778
Alignment:
Q  250 tattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaac 339  Q
    ||||| |||||||||||||| ||  || ||||||||||||| |  || ||||| ||||    |||||||||||||| |||||||||||||    
T  2601689 tattaattacacatgaatagaagacaaacggacaacaagctgcatcgttagactttttacagtggcaaaatcaatcctcgtaaacacaac 2601778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Complemental strand, 38670920 - 38670872
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgaca 438  Q
    |||| |||||||| ||||||||||||||||||||| || |||||||||||    
T  38670920 atgttgattgtcagaacacgctttctcatgtttga-cactttacttgaca 38670872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 26393889 - 26393841
Alignment:
Q  294 ccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||||| ||||| |||||||| || ||||||| ||||||||||||||||    
T  26393889 ccgctaaaccttgttggatggaaatatcaatcctcgtaaacacaacatt 26393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 37133039 - 37132991
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgac 437  Q
    |||| |||||||| ||||||||||||||||||| |||| ||| ||||||    
T  37133039 atgttgattgtcagaacacgctttctcatgtttaaccactttgcttgac 37132991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 535
Target Start/End: Original strand, 39491212 - 39491252
Alignment:
Q  495 atattcacttttattttgtccctcgtgcaacagacttagtt 535  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  39491212 atattcacttttattttgtccctcctgcaacaaccttagtt 39491252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 51234587 - 51234623
Alignment:
Q  359 aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  51234587 aacattgttatgcataaccttttgaactctatgtaga 51234623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 6e-45; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 235 - 395
Target Start/End: Original strand, 39434514 - 39434674
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac 334  Q
    |||||| ||||| ||||||||||||||||||||||||||   ||   ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39434514 aatatttactatcaatattacttacacatgaataggaggc--gctagcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaac 39434611  T
Q  335 acaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||| ||| | ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  39434612 acaacattcatggatctaagagacattacattgatatgcataaccctttggactctatgtaga 39434674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 42659073 - 42659230
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| ||||| ||||||||||||||| |||||||||| |||||||||||||| ||  ||| |||||||||||||||| |||||| |||| |||||||||    
T  42659073 atatttactatcaatattacttacacaagaataggaggcaagcggacaacaagttataccgttagacctttttggatgacaaaattaatcctcgtaaaca 42659172  T
Q  336 caacatttatgtacct--aagagacaacattgttatgcataaccctttggactctatg 391  Q
    ||||||| ||| ||||  |||| | || |||| ||||||||||||||| |||||||||    
T  42659173 caacattcatgaacctagaagacataatattgctatgcataaccctttagactctatg 42659230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 255 - 395
Target Start/End: Original strand, 38815159 - 38815301
Alignment:
Q  255 cttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaag 354  Q
    ||||||||||||||| ||| |||||| ||||||||| ||||||||  ||||||||||||| |||| ||||| |||||||||||||||| ||| ||||| |    
T  38815159 cttacacatgaatagaaggcaagcgggcaacaagctgcgccgctaagcctttttggatggaaaaaccaatcctcgtaaacacaacattcatggacctagg 38815258  T
Q  355 agaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||||  |||||| ||||||| |||||||| ||||||||||||    
T  38815259 agacatgacattgctatgcatgaccctttgaactctatgtaga 38815301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 251 - 393
Target Start/End: Complemental strand, 22589582 - 22589438
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||  ||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||  |||    
T  22589582 attatttacacttgaataaaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacattcatagacc 22589483  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgta 393  Q
    || ||||||  |||||| ||||||| ||| |||| ||||||||||    
T  22589482 tatgagacatgacattgctatgcatgaccttttgaactctatgta 22589438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 275 - 395
Target Start/End: Original strand, 37514106 - 37514228
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac--aacattgttatgca 372  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||| ||||||| |||| || |||||||| ||| |||||||||||  ||||||| ||||||    
T  37514106 aagcgggcaacaagctgcgccgttagacctttttgggtggcaagatcaatcctcgtgaatacaacattcatggacctaagagacgtaacattgatatgca 37514205  T
Q  373 taaccctttggactctatgtaga 395  Q
    | ||| |||| ||||||||||||    
T  37514206 tgaccttttgaactctatgtaga 37514228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 298 - 395
Target Start/End: Original strand, 3187878 - 3187976
Alignment:
Q  298 tagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||||||||||||||||| ||||  |||||||||||||||| ||| ||||| |||||  ||||||| ||||||||||||||| |||||||||||||    
T  3187878 tagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgctatgcataacccttt-gactctatgtaga 3187976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 18804474 - 18804619
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||| | ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||  | || |||    
T  18804474 attatttacacttgaatagaaggcaagcaggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacaaaaca-ctctgaacc 18804572  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||| ||  |||||||||||||| ||| |||| | ||||||||||    
T  18804573 taggagtcatgacattgttatgcatgaccttttgaaatctatgtaga 18804619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 18596845 - 18596759
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacaca 337  Q
    |||| |||||| ||||||| ||| |||| ||||||||||| |||||||||||||||| ||||||||||| ||||| |||| ||||||    
T  18596845 attatttacacttgaatagaaggcaagctgacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtgaacaca 18596759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 44337198 - 44337268
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaa 319  Q
    |||||||||||||||||||||||||| |||||  |||||||||  |||||| ||||||||||||||||||||    
T  44337198 aatattacttacacatgaataggaggcaagcgagcaacaagct-ggccgctggacctttttggatggcaaaa 44337268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Original strand, 8619886 - 8619939
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  8619886 gattgtcaaaatacgctttttcatgtttgaccattttacttgacgcaactttta 8619939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 395
Target Start/End: Original strand, 3821148 - 3821231
Alignment:
Q  314 gcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||| ||||||| ||||||||| |||||||||| ||||| ||||||  |||||| ||||||| |||||||| ||||||||||||    
T  3821148 gcaatatcaatcctcgtaaacataacatttatgaacctaggagacatgacattgctatgcattaccctttgaactctatgtaga 3821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 259 - 382
Target Start/End: Complemental strand, 25022052 - 25021927
Alignment:
Q  259 cacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac 358  Q
    ||||||||||| ||| || |  ||||||||||||| |||||||  ||||||||||  |||||||||| | ||||||||||||||  || ||||| ||||     
T  25022052 cacatgaatagaaggcaaacaaacaacaagctacgtcgctagaattttttggatgataaaatcaatcattgtaaacacaacattcctggacctaggagat 25021953  T
Q  359 a--acattgttatgcataaccctttg 382  Q
    |  |||||||| ||||| ||||||||    
T  25021952 atgacattgttgtgcatgaccctttg 25021927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 359
Target Start/End: Original strand, 8882236 - 8882313
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    ||||||||| ||||| || || ||||| ||||||||||| |||| |||||||||||||||| ||| ||||| ||||||    
T  8882236 caacaagctgcgccgttaaacattttttgatggcaaaattaatcctcgtaaacacaacattcatggacctaggagaca 8882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 24320229 - 24320289
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||||||| | | |||||||||||||||||  ||||||||||| ||||||||||||||||    
T  24320229 caacaagctgcactgctagacctttttggatatcaaaatcaatcctcgtaaacacaacatt 24320289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 8619683 - 8619774
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||||||||||  || ||||||||||| ||||| |   | ||| |||||||| | ||||||||||||| ||||||||||||||||    
T  8619683 attaattacacatgaataaaagttaagcggacaataagctgcattgttaggcctttttgaaaggcaaaatcaatcgtcgtaaacacaacatt 8619774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 24350963 - 24350880
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaac 339  Q
    |||||||||||||| || ||||||| ||||| |||  ||| |||| | |||||||| ||||||| ||||| |||||||||||||    
T  24350963 ttacacatgaatagaagataagcgggcaacaggctgggccactaggcttttttggagggcaaaaccaatcctcgtaaacacaac 24350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 6592479 - 6592545
Alignment:
Q  293 gccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    |||||||||||||| |||||| ||||| ||||  |||||||||||||||| ||| ||||| ||||||    
T  6592479 gccgctagacctttctggatgacaaaaccaatactcgtaaacacaacattcatgaacctatgagaca 6592545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 39434734 - 39434792
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||| ||| ||| |||||| |||||||||    
T  39434734 atgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaactttta 39434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 25326159 - 25326207
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggaca 283  Q
    |||||| ||||| ||||||||||||||||| ||||||| ||||||||||    
T  25326159 aatatttactatcaatattacttacacatggataggagataagcggaca 25326207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 500103 - 500194
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||| ||||||| ||| |||||| ||| |||||  ||||  |  |||||||| |||| |||||||||| ||||||||||||||||    
T  500103 attatttacacttgaatagaaggcaagcgggcaataagctgtgccgtcaagcctttttgaatggtaaaatcaatcctcgtaaacacaacatt 500194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 8540574 - 8540531
Alignment:
Q  303 ctttttggatggcaaaatcaatcttcgtaaacacaacatttatg 346  Q
    |||||||||||  |||||||||| ||||||||||||||||||||    
T  8540574 ctttttggatgataaaatcaatcatcgtaaacacaacatttatg 8540531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 24124889 - 24125035
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| ||||||  || ||||| |||||| |  | |||  |||||||||||  |||| | |||||||||||||| ||| |||    
T  24124889 attatttacacttgaatagaaggcaagcggcaaaaaagctgcgccgccaagcttttacggatggcaaaactaatccttgtaaacacaacattcatggacc 24124988  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| ||| |||| ||| ||||||||    
T  24124989 tatgagacatgacattgctatgcatgaccttttgaactttatgtaga 24125035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 500294 - 500352
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||| ||||||||||||| ||| ||| |||||| |||||||||    
T  500294 atgttgattgtcagaacacgttttctcatgtttggccactttgcttgacgcaactttta 500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 4699763 - 4699833
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    ||||||||| |||| |||  ||||||||||||||||||  |||| | |||||||||||||| ||| |||||    
T  4699763 caacaagctgcgccactaagcctttttggatggcaaaactaatccttgtaaacacaacattcatggaccta 4699833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 6792172 - 6792238
Alignment:
Q  293 gccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    ||||||||| |||| | |||| ||||| |||| ||||||||||||||||||||| || || ||||||    
T  6792172 gccgctagatctttcttgatgacaaaaccaatattcgtaaacacaacatttatggacttatgagaca 6792238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 9259485 - 9259447
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  9259485 tttttggatgacaaaatcaatcttcgtaaatacaacatt 9259447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 24451010 - 24451105
Alignment:
Q  278 cggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcat 373  Q
    ||||||| ||||| ||||||||||  |||| ||||||||||| ||||| |||| ||||||||||| ||| ||||| ||||||  |||||| |||||||    
T  24451010 cggacaataagctgcgccgctagatatttt-ggatggcaaaa-caatcatcgtgaacacaacattcatggacctaggagacatgacattgctatgcat 24451105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 35740026 - 35739968
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| ||| |||||||||||||||| ||| ||| ||| ||||||||||||    
T  35740026 atgttgattgtcagaacccgctttctcatgtttggccactttgcttaacacaactttta 35739968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 15566139 - 15566208
Alignment:
Q  250 tattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaa 319  Q
    ||||| |||||  ||||||| | | |||||| |||||| ||| |||||||||| ||||||||||||||||    
T  15566139 tattatttacatttgaatagaatgcaagcgggcaacaaactatgccgctagacttttttggatggcaaaa 15566208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 42922162 - 42922109
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    ||||||||||||||| |||||||  ||||||||||||  ||||| |||||||||    
T  42922162 gattgtcaaaacacgttttctcaaatttgaccattttgtttgacgcaactttta 42922109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 453
Target Start/End: Original strand, 6592642 - 6592706
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactg 453  Q
    |||| |||||| | |||||||||||||||||||| ||| ||| |||||| || |||||| |||||    
T  6592642 atgttgattgtgagaacacgctttctcatgtttggccactttgcttgacgcagcttttacgactg 6592706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 6618178 - 6618254
Alignment:
Q  283 aacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    ||||||||  |||| |||| ||||||||||| ||||| ||||  ||||||||| |||||| ||| ||||| ||||||    
T  6618178 aacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagaca 6618254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 4e-43; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 237 - 395
Target Start/End: Complemental strand, 17249565 - 17249405
Alignment:
Q  237 tattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||| ||||| ||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  17249565 tatttactatcaatattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacac 17249466  T
Q  337 aacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||| ||| || || |||||  ||||||| ||| ||||| |||||||||||||||||||    
T  17249465 aacattcatgaacttaggagacataacattgctatacataatcctttggactctatgtaga 17249405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 33220966 - 33220811
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacat 341  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||| ||||  |||||||| ||||||    
T  33220966 actatcaatattacttacacatgaataggaggcaagcggccaacaagctgcgccgctagaccttttaggatggcaaaaccaattatcgtaaacgcaacat 33220867  T
Q  342 ttatgtacct--aagagacaacattgttatgcataaccctttggactctatgtaga 395  Q
    | ||| ||||  |||| ||||||||| |||||||||||||||||||| ||||||||    
T  33220866 tcatggacctagaagacacaacattgctatgcataaccctttggactatatgtaga 33220811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 248 - 395
Target Start/End: Complemental strand, 357965 - 357816
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgt 347  Q
    ||||||||||||| |||||||||||  || | |||||||||||| ||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||     
T  357965 aatattacttacatatgaataggagacaaaccgacaacaagctatgccgctatacatttttagatggcaaaattaatcttcgtaaacacaacattcatgg 357866  T
Q  348 accta--agagacaacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||  ||||| ||||||| ||||| ||| | |||||||||||||||||    
T  357865 acctaggagagataacattgctatgcttaatcatttggactctatgtaga 357816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 7749327 - 7749433
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| ||||| ||||||| |||||||||||||||||| |||||| ||||||||| | |||||||||||||| ||||||||||| ||||| |||||||||    
T  7749327 atatttactatcaatattagttacacatgaataggaggcaagcgggcaacaagctgcaccgctagaccttttaggatggcaaaaccaatcctcgtaaaca 7749426  T
Q  336 caacatt 342  Q
    |||||||    
T  7749427 caacatt 7749433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 32115609 - 32115725
Alignment:
Q  281 acaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccc 378  Q
    |||||||| | | ||||||||||||||| ||| |||||||||||| |||||||||||||||| ||| ||||| ||||||  |||||||||||||| |||     
T  32115609 acaacaagttccaccgctagacctttttagatagcaaaatcaatcatcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgacct 32115708  T
Q  379 tttggactctatgtaga 395  Q
    |||| ||||| ||||||    
T  32115709 tttgaactctttgtaga 32115725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 34304399 - 34304503
Alignment:
Q  293 gccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctat 390  Q
    ||||||| |||||||||||| |||||||||||| ||||||| |||||||| ||  ||||| ||||||  | |||| |||||||||| |||||||||||||    
T  34304399 gccgctatacctttttggattgcaaaatcaatcctcgtaaatacaacattcatagacctatgagacatgatattgctatgcataactctttggactctat 34304498  T
Q  391 gtaga 395  Q
    |||||    
T  34304499 gtaga 34304503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 380
Target Start/End: Complemental strand, 3137488 - 3137362
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaaga 355  Q
    |||||||||||| | ||| || ||| ||||||| | | | ||||  |||||||||||||||||| ||||| |||||||||||||||| ||| ||||| ||    
T  3137488 ttacacatgaatggaaggcaaacgggcaacaagttgcactgctaagcctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctagga 3137389  T
Q  356 gaca--acattgttatgcataaccctt 380  Q
    ||||  |||||| ||||||| ||||||    
T  3137388 gacatgacattgctatgcatgaccctt 3137362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 28625827 - 28625883
Alignment:
Q  286 aagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  28625827 aagctgcgccgctagatctttttgaatggcaaaatcaatctccgtaaacacaacatt 28625883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 34168782 - 34168872
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||||||||||| ||| |||||| | ||||| | ||||||||| ||||||||||| |||||| ||||| |||| |||||||||||    
T  34168782 attaattacacatgaatagaaggcaagcgggcgacaagttgcgccgctaggcctttttggatagcaaaaccaatcctcgt-aacacaacatt 34168872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 959493 - 959575
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta--agagacaacattgttatgcataaccctttg 382  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||| |||||  ||| ||||||||| ||||||| ||| ||||    
T  959493 cctttttagatgacaaaatcaatcctcgtaaacacaacattcatggacctaggagacacaacattgctatgcatgaccttttg 959575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 13398376 - 13398275
Alignment:
Q  303 ctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtagattgtc 400  Q
    ||||||||||| ||||||||| | |||||||||||||||||||| | |||  || |   |||||||||||||| | | |||| |||||||||||| ||||    
T  13398376 ctttttggatgacaaaatcaaccatcgtaaacacaacatttatgcatctagaagtcgtgacattgttatgcatcatcttttgaactctatgtagaatgtc 13398277  T
Q  401 aa 402  Q
    ||    
T  13398276 aa 13398275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 256 - 382
Target Start/End: Complemental strand, 28009228 - 28009100
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaaga 355  Q
    |||||||||||||| ||| || ||||||| ||||| || || ||| ||||||||||| |||||||||||  | ||||| ||||| || ||| ||||| ||    
T  28009228 ttacacatgaatagaaggcaaacggacaataagctgcgtcgttaggcctttttggattgcaaaatcaattctggtaaagacaacgttcatggacctagga 28009129  T
Q  356 gaca--acattgttatgcataaccctttg 382  Q
    | ||  |||||||| || || ||||||||    
T  28009128 gtcatgacattgttgtgtatgaccctttg 28009100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 45867 - 45816
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagac 302  Q
    |||| |||||| ||||||||||| |||||| ||||||||| |||||||||||    
T  45867 attatttacacttgaataggaggcaagcgggcaacaagctgcgccgctagac 45816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 32531109 - 32531042
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacc 303  Q
    ||||| ||||| ||||||||||||||||||||| |||  | || ||||||||||| | ||||||||||    
T  32531109 atatttactatcaatattacttacacatgaatatgagacacgcagacaacaagctgcaccgctagacc 32531042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 24016404 - 24016462
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||| | |||| ||||||||||||||||| |||||||||||  |||||||||    
T  24016404 atgttgattgtgagaacaagctttctcatgtttgactattttacttgatgcaactttta 24016462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 749562 - 749501
Alignment:
Q  263 tgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaat 324  Q
    ||||||| ||| ||||||||||||||||  | ||  |||| |||||||||||||||||||||    
T  749562 tgaatagaaggcaagcggacaacaagctgtgtcgtcagacgtttttggatggcaaaatcaat 749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 4166114 - 4166022
Alignment:
Q  305 ttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||||||| ||||| |||||||||| | ||||||  ||||| | ||||  ||||||| |||||| ||| |||  ||||||||||||    
T  4166114 ttttggatggcaaaaccaatcctcgtaaacactatatttattgacctaggtgacatgacattgtcatgcatgaccttttaaactctatgtaga 4166022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 4206788 - 4206696
Alignment:
Q  305 ttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||||||||||| ||||| |||||||||| | ||| ||  ||||| | ||||  ||||||| |||||| ||| |||| ||||||||||||    
T  4206788 ttttggatggcaaaaccaatcctcgtaaacactatattcattgacctaggtgacatgacattgtcatgcatgaccttttgaactctatgtaga 4206696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 34554476 - 34554435
Alignment:
Q  297 ctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    |||| |||||||||||| ||||||||||| ||||||||||||    
T  34554476 ctaggcctttttggatgacaaaatcaatcctcgtaaacacaa 34554435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 447
Target Start/End: Original strand, 3714998 - 3715042
Alignment:
Q  403 aacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||    
T  3714998 aacacgttttctcatgtttaaccattttgtttgacacaactttta 3715042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 28543447 - 28543507
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactgc 454  Q
    |||| |||||||||| ||||||||||||| ||| ||| |||||| | ||||||||| ||||    
T  28543447 gattttcaaaacacgatttctcatgtttggccactttgcttgacgcgacttttaaggctgc 28543507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 29338294 - 29338179
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccct 379  Q
    ||||||||| | | ||||| || |||||||| | |||||||||| | |||||||||||||| ||| ||||| ||| ||  |||||| | ||||| |||||    
T  29338294 caacaagctgcactgctaggccattttggatagaaaaatcaatccttgtaaacacaacattcatggacctaggagtcatgacattgatgtgcatgaccct 29338195  T
Q  380 ttggactctatgtaga 395  Q
    ||| ||  ||||||||    
T  29338194 ttgaaccatatgtaga 29338179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 237 - 395
Target Start/End: Original strand, 34644413 - 34644573
Alignment:
Q  237 tattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||| ||||| |||||||  || |||| |||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||| ||||||||||    
T  34644413 tatttactatcaatattatatatacataaataggaggtaagcgggcaacaaactgcgccgctagacttttttggatggcaaaatcaatcatcgtaaacac 34644512  T
Q  337 aacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||| ||| ||||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  34644513 aacattcatggacctaggagacataacattgatatgcataaccctttggactctatgtaga 34644573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 5453942 - 5454060
Alignment:
Q  237 tattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||| ||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||| ||||| | ||||||||    
T  5453942 tatttactatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatgacaaaaccaatccttgtaaacac 5454041  T
Q  337 aacatttatgtacctaaga 355  Q
    |||||| ||| ||||||||    
T  5454042 aacattcatggacctaaga 5454060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 48841337 - 48841182
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacat 341  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||| ||||||||| |||||||||||| ||||||||| || ||    
T  48841337 actattaatattacttacacatgaatatgaggtaagcggacaacaagttgcgctgctagacttttttggattgcaaaatcaatcctcgtaaacataatat 48841238  T
Q  342 ttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    | ||  |  || |||||  |||||| ||||||||||| |||| |||||||||||||    
T  48841237 tcatagatttaggagacataacattattatgcataactctttagactctatgtaga 48841182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 2764372 - 2764486
Alignment:
Q  283 aacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac--aacattgttatgcataaccctt 380  Q
    |||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||  ||||||| | ||||||||||||    
T  2764372 aacaagctgcgccgctaaacctttttggatggtaaaatcaatcatcgtaaacacaacatttatggacctaagagacataacattgatttgcataaccctt 2764471  T
Q  381 tggactctatgtaga 395  Q
    |||||| ||||||||    
T  2764472 tggactttatgtaga 2764486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 235 - 395
Target Start/End: Original strand, 47459528 - 47459689
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac 334  Q
    |||||| || || |||||| ||||||||||||||||||  |||| ||||||||||| ||| |||||||||||||| ||||| ||||||||  ||||||||    
T  47459528 aatatttacgatcaatattccttacacatgaataggagccaagcagacaacaagctgcgc-gctagacctttttgaatggctaaatcaattctcgtaaac 47459626  T
Q  335 acaacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||||||||  || || |||||  ||||||| ||||||||  |||||||||||||||||||    
T  47459627 acaacatttatagacttaggagacataacattgctatgcatattcctttggactctatgtaga 47459689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 22346756 - 22346902
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||  |||| |||| ||||||||||| ||  |||    
T  22346756 attatttacacttgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaactaatcctcgtgaacacaacattcataaacc 22346855  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||  ||||||| ||| |||| ||||| ||||||    
T  22346856 taggagacatgacatttctatgcatgaccttttgaactctgtgtaga 22346902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 24177757 - 24177611
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||  |||||| ||||||||| | ||||||||||||||||| |||||||| ||||| |||| ||||||||||| ||| |||    
T  24177757 attatttacacttgaatagaagacaagcgggcaacaagctgcaccgctagacctttttggttggcaaaaccaatcctcgtgaacacaacattcatggacc 24177658  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || |||| |  |||||| ||||||| ||  |||| ||||||||||||    
T  24177657 taggagatatgacattgctatgcatgactttttgaactctatgtaga 24177611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 28493577 - 28493477
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||  || |||||||||| || |||||||||||||||||||||||||||||||||| |||| |||| |||||| ||| |||    
T  28493577 attatttacacttgaatagaagacaaacggacaacaaactgcgccgctagacctttttggatggcaaaatcaatcctcgtgaacataacattcatggacc 28493478  T
Q  351 t 351  Q
    |    
T  28493477 t 28493477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 868647 - 868560
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    |||| |||||| ||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| | || |||||||    
T  868647 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatccttgtgaacacaa 868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 1114114 - 1114023
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||| ||||||| ||  |||||| |||||||||  |||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  1114114 attatttacacttgaatagaagccaagcgggcaacaagctgtgccgttagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 1114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 2898595 - 2898709
Alignment:
Q  283 aacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctt 380  Q
    |||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||| |||  | || ||||||  | |||||||||||| | | ||    
T  2898595 aacaagctacgccgctaagcctttttggatggcaaaatcaatcctcttaaacacaacattcatgatcgtatgagacatgatattgttatgcatgatcttt 2898694  T
Q  381 tggactctatgtaga 395  Q
    || ||||||||||||    
T  2898695 tgaactctatgtaga 2898709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 21472864 - 21473010
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| | | |||||| ||| ||| | |||||||||||||||||||||||||||| || || || | ||| ||||||| ||| |||    
T  21472864 attatttacacttgaatagaatgcaagcgggcaataagttgcgccgctagacctttttggatggcaaaaccagtcctcctgaacgcaacattcatggacc 21472963  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||| ||||||| ||| |||| ||||||||||||    
T  21472964 taggagacatgacattgctatgcatgaccttttgaactctatgtaga 21473010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 275 - 395
Target Start/End: Complemental strand, 28041349 - 28041227
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgca 372  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| || | | ||||||||| ||| || ||   ||||  |||||| ||||||    
T  28041349 aagcggacaacaagctccgccgctagacctttttggatggaaaaatcaatcctcatgagcacaacattcatggacttagaggacatgacattgctatgca 28041250  T
Q  373 taaccctttggactctatgtaga 395  Q
    | ||| |||| ||||||||||||    
T  28041249 tgaccttttgaactctatgtaga 28041227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 30688418 - 30688509
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| ||||||||||||||  || |||||| ||||||||| ||||||||| |||||||||||  ||||| ||||| ||||||||||||||||    
T  30688418 attaattacacatgaatagatggcaagcgggcaacaagctgcgccgctaggcctttttggataacaaaaccaatcctcgtaaacacaacatt 30688509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 19035340 - 19035426
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacaca 337  Q
    |||| |||||| ||||||| ||| || ||||||||||||| |||||||||||||||||||||| ||||| ||||| |||| ||||||    
T  19035340 attatttacacttgaatagaaggcaatcggacaacaagctgcgccgctagacctttttggatgacaaaaccaatcctcgtgaacaca 19035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 402
Target Start/End: Complemental strand, 31737568 - 31737416
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| || | ||||||||||| |||||| |  |||||||||||||||||||||||| |||||||||| | ||| ||| | |    
T  31737568 attatttacacttgaatagaaggcaaacagacaacaagctgcgccgccaagcctttttggatggcaaaatcaatcctcgtaaacacta-attcatggatc 31737470  T
Q  351 taagagac--aacattgttatgcataaccctttggactctatgtagattgtcaa 402  Q
    || || ||  ||||||| ||||||| ||| |||| |||||||||||| ||||||    
T  31737469 taggaaacataacattgatatgcatgaccttttgaactctatgtagaatgtcaa 31737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 449
Target Start/End: Complemental strand, 4862022 - 4861969
Alignment:
Q  396 ttgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaag 449  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  4862022 ttgtcagaagacgctttctcatgtttgaccattttacttgacgcaacttttaag 4861969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 4611074 - 4611158
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    ||||||||||||||||  || | |||||||||||||||| ||||||||||| |||| ||||||| ||| ||| ||||| ||||||    
T  4611074 aagcggacaacaagctgtgctgttagacctttttggatgacaaaatcaatcatcgtgaacacaatattcatggacctaggagaca 4611158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 20260012 - 20259897
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccct 379  Q
    |||||| || |||||||||||||||||||||||||||| |||||    ||||||||||||||||  || || ||||||  |||||  ||||||| ||| |    
T  20260012 caacaaactgcgccgctagacctttttggatggcaaaaccaatccatataaacacaacatttattaacttatgagacatgacattactatgcatgacctt 20259913  T
Q  380 ttggactctatgtaga 395  Q
    ||| ||||||||||||    
T  20259912 ttgaactctatgtaga 20259897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 7213104 - 7213183
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgt 330  Q
    |||| |||||| ||||||| ||| |||||| ||||||| | ||||||||||||||||||||||| |||| ||||| ||||    
T  7213104 attatttacacttgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggtaaaaccaatcatcgt 7213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 395
Target Start/End: Complemental strand, 4862234 - 4862089
Alignment:
Q  253 tacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaa-tcaatcttcgtaaacacaacatttatgtacct 351  Q
    ||||||||||||||||  | | ||  || ||||||||| ||||||||| ||||  |  ||||||||| |||||| |||||| ||||||||| ||| | ||    
T  4862234 tacttacacatgaatacaaagcaactgggcaacaagctgcgccgctaggccttcatatatggcaaaaatcaatcctcgtaatcacaacattcatggatct 4862135  T
Q  352 aagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||| |||   |||||||||||||| |||||||| ||||||||||||    
T  4862134 aagggacgtgacattgttatgcatgaccctttgaactctatgtaga 4862089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 31742546 - 31742485
Alignment:
Q  264 gaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatc 325  Q
    |||||| ||||||| |||||||||| |||| |||| ||||||||| ||||||||||||||||    
T  31742546 gaatagaaggtaagaggacaacaagttacgtcgctggacctttttagatggcaaaatcaatc 31742485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 21473070 - 21473118
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgac 437  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  21473070 atgttgattgtcagaacacgctttctcatgtttggccattttacttgac 21473118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 45835380 - 45835341
Alignment:
Q  303 ctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  45835380 ctttttggatggcaaaatcaatcctcgtaaacacaacatt 45835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 36486958 - 36487000
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttga 436  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  36486958 gattgtcaaaacacgctttctcatatttgaccactttacttga 36487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 35387890 - 35387809
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacaca 337  Q
    |||||||||||||| ||  ||| |||||||||||||||||| || || |||||| ||| ||||| ||||| | |||||||||    
T  35387890 ttacacatgaatagaagacaagtggacaacaagctacgccgttaaacttttttgaatgacaaaaccaatcattgtaaacaca 35387809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 7483781 - 7483836
Alignment:
Q  287 agctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| ||||||||  ||||||| ||||||||||  |||||||||||||||||||||    
T  7483781 agctgcgccgctaagcctttttagatggcaaaactaatcttcgtaaacacaacatt 7483836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 21934258 - 21934325
Alignment:
Q  271 aggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    |||||||| | ||||||||| ||||||||  |||||||||||||||||| ||||| || |||| ||||    
T  21934258 aggtaagcaggcaacaagctgcgccgctaaccctttttggatggcaaaaccaatcctcttaaatacaa 21934325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 19035514 - 19035572
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||| ||| ||| |||||| || ||||||    
T  19035514 atgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcagctttta 19035572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 22346962 - 22347020
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| ||||||||||||||| |||| ||| ||| ||||||| ||||||||    
T  22346962 atgttgattgtcagaacacgctttctcatatttggccactttgcttgacataactttta 22347020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 34644633 - 34644691
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||||| |||||| |||||||||||||||||||| ||| |||  ||||| |||||||||    
T  34644633 atgtaggttgtcagaacacgctttctcatgtttggccactttgtttgacgcaactttta 34644691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 50161457 - 50161399
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||| | |||||||||||||||||||| ||| ||| |||||| |||||||||    
T  50161457 atgttgattgtgagaacacgctttctcatgtttgtccactttgcttgacgcaactttta 50161399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 454
Target Start/End: Original strand, 2764546 - 2764611
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactgc 454  Q
    |||| |||||||  |||||| ||||||||||||||||| |||   |||||||||||||| ||||||    
T  2764546 atgttgattgtcggaacacgttttctcatgtttgaccactttgtctgacacaacttttaggactgc 2764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 17078031 - 17077966
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgt 347  Q
    |||||| || ||||| ||||| ||||| |||||||||| ||||| || | ||||||||||||||||    
T  17078031 caacaatctgcgccgttagacttttttagatggcaaaaccaatcatcatgaacacaacatttatgt 17077966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 37932252 - 37932200
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||||||| ||||| ||||||| | |||||||||||| ||||||||||||||||    
T  37932252 gattgtcagaacac-ctttctcgtatttgaccattttgcttgacacaactttta 37932200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 392
Target Start/End: Complemental strand, 6670351 - 6670208
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||||||||| || ||||| ||| ||| |||||||||| | |||  ||| |  ||||||||||||||||| |||  ||||||| | |||||| ||| | |    
T  6670351 attacttacatataaatagaaggcaagtggacaacaaggtgcgctactatatttttttggatggcaaaattaattatcgtaaatataacattcatgaatc 6670252  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgt 392  Q
    || |||| |  ||||||| |||||| || ||||| |||||||||    
T  6670251 taggagatatgacattgtaatgcatgactctttgaactctatgt 6670208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 29169833 - 29169777
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttt 445  Q
    |||| |||||||| |||||| |||||| |||||| |||  |||||||||||||||||    
T  29169833 atgttgattgtcagaacacgttttctcgtgtttggccaccttacttgacacaacttt 29169777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 45057585 - 45057629
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgta 348  Q
    |||||||||| ||||||||||| |  |||||||||||||||||||    
T  45057585 tttttggatgacaaaatcaatcattataaacacaacatttatgta 45057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 45659688 - 45659628
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaag 449  Q
    |||| |||||||| ||||||||||||| |||||| |||  ||||||||| || ||||||||    
T  45659688 atgttgattgtcagaacacgctttctcgtgtttggccaccttacttgacgcagcttttaag 45659628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 9e-41; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 237 - 395
Target Start/End: Original strand, 35310295 - 35310455
Alignment:
Q  237 tattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| || || || |||| |||||||||||||| ||||  ||||||||||    
T  35310295 tattaactatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgtcgttaaacctctttggatggcaaaaccaattctcgtaaacac 35310394  T
Q  337 aacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    |||||| ||| ||||| |||||  ||||||| |||||| ||||||||||||||||||||||    
T  35310395 aacattcatggacctaggagacataacattgatatgcaaaaccctttggactctatgtaga 35310455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 430454 - 430609
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacat 341  Q
    ||||| |||||||||| ||||||||||||||| |||| ||| ||||||| | ||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  430454 actatcaatattacttgcacatgaataggaggcaagcagacnacaagctgcaccgatagacctttttggatggcataatcaatcctcgtaaacacaacat 430553  T
Q  342 ttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    | ||| ||||| |||||  ||||||  |||||||||||||||||| ||||||||||    
T  430554 tcatggacctaggagacataacattactatgcataaccctttggaatctatgtaga 430609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 248 - 395
Target Start/End: Complemental strand, 13167159 - 13167010
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgt 347  Q
    ||||||| |||||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||  || |||||||| |||||||| ||||||| |||     
T  13167159 aatattaattacacatgaataggaggcaagtgggcaacaagctgcgccgctagatctttttggataacagaatcaatcatcgtaaacccaacattcatgg 13167060  T
Q  348 acctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| |||||  | ||||| |||||||||||||||||||||||||||||    
T  13167059 acctaggagacataccattgctatgcataaccctttggactctatgtaga 13167010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 248 - 395
Target Start/End: Complemental strand, 33692301 - 33692155
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgt 347  Q
    |||||||||||||||||||||||||| |||| | ||||||||| |||||||||| |||||||||||| |||| |||   ||||||||| |||||| |||     
T  33692301 aatattacttacacatgaataggaggcaagcaggcaacaagctgcgccgctagatctttttggatggaaaaaccaa--atcgtaaacagaacattcatga 33692204  T
Q  348 acctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| |||||  ||||||||||||||| ||||||||||| |||||||||    
T  33692203 acctatgagacataacattgttatgcat-accctttggacactatgtaga 33692155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 25663287 - 25663132
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacat 341  Q
    ||||| |||||||||||||||| || |||||| || ||  ||||||||| || || |||||||||||||||| ||||  ||||| |||||||| ||||||    
T  25663287 actatcaatattacttacacataaaaaggaggcaaacgagcaacaagctgcgtcgttagacctttttggatgacaaagccaatcctcgtaaactcaacat 25663188  T
Q  342 ttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    | ||| ||||| | |||  ||||||| |||||||||||||||||||||||||||||    
T  25663187 tcatggacctaggggacataacattgatatgcataaccctttggactctatgtaga 25663132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 235 - 377
Target Start/End: Original strand, 27336540 - 27336684
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac 334  Q
    |||||| ||||| |||||||||||||||||||||||||  |||||||||| || || | ||||||||||||||| |||||||||||||||| | |||||     
T  27336540 aatatttactatcaatattacttacacatgaataggagacaagcggacaataaactgcaccgctagaccttttttgatggcaaaatcaatccttgtaaaa 27336639  T
Q  335 acaacatttatgtacctaagagac--aacattgttatgcataacc 377  Q
    |||||||| ||| || || |||||  ||||||| ||| |||||||    
T  27336640 acaacattcatggacttaggagacataacattgctatacataacc 27336684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 2566310 - 2566195
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccct 379  Q
    ||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||| ||||||  |||||| ||||||| ||| |    
T  2566310 caacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattgatggatctaggagacatgacattgctatgcatgacctt 2566211  T
Q  380 ttggactctatgtaga 395  Q
    ||| ||||||||||||    
T  2566210 ttgaactctatgtaga 2566195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 2917616 - 2917539
Alignment:
Q  242 actattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaa 319  Q
    ||||| |||||||| ||||||||||||||||| |||| | |||||| || ||||||||||||||||||||||||||||    
T  2917616 actatcaatattacctacacatgaataggaggcaagcaggcaacaaactgcgccgctagacctttttggatggcaaaa 2917539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 42921559 - 42921704
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| ||| ||  |||||||| |||||||||| ||||||||||||||||| ||||| | |||||||||| | ||||| ||     
T  42921559 attatttacacttgaatagaaggcaagtgggaaacaagctgcgccgctagatctttttggatggcaaaaccaatccttgtaaacacaata-ttatggact 42921657  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||||||||||| ||| | || ||||||||||||    
T  42921658 taggagacatgacattgttatgcatgaccttctgaactctatgtaga 42921704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 255 - 382
Target Start/End: Original strand, 23023460 - 23023589
Alignment:
Q  255 cttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaag 354  Q
    ||||||||| ||||  ||| || ||||||| ||| | |||| |||| |||||||||||| |||||||||||||||||||||||||||| ||  ||||| |    
T  23023460 cttacacataaataaaaggcaaacggacaataagatgcgcccctaggcctttttggatgacaaaatcaatcttcgtaaacacaacattcatcgacctagg 23023559  T
Q  355 agaca--acattgttatgcataaccctttg 382  Q
    |||||  |||||| ||||||| ||| ||||    
T  23023560 agacatgacattgatatgcatgaccttttg 23023589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 248 - 382
Target Start/End: Complemental strand, 32270045 - 32269910
Alignment:
Q  248 aatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgt 347  Q
    ||||||| |||||| ||||||| ||| ||||||  |||||||| | ||||||  | |||||||||||| ||||||||| |||||||||||||||| |||     
T  32270045 aatattatttacacttgaatagaaggcaagcgggtaacaagctgc-ccgctatgcttttttggatggcgaaatcaatcctcgtaaacacaacattcatgg 32269947  T
Q  348 acctaagagaca--acattgttatgcataaccctttg 382  Q
    ||||| ||||||  |||||| ||||||| ||| ||||    
T  32269946 acctaggagacatgacattgctatgcatgaccttttg 32269910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 446
Target Start/End: Original strand, 35456023 - 35456080
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttt 446  Q
    |||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  35456023 atgttgattgttagaacacgctttctcatgtttgaccattttacttaacacaactttt 35456080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 395
Target Start/End: Complemental strand, 22188855 - 22188755
Alignment:
Q  297 ctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtag 394  Q
    |||||| |||||||||| ||||| ||||  |||||||||||||||| ||| | ||| ||||||  | |||||||||||| ||| |||| |||||||||||    
T  22188855 ctagacttttttggatgacaaaaccaattctcgtaaacacaacattcatgaatctaggagacatgatattgttatgcatgaccttttgaactctatgtag 22188756  T
Q  395 a 395  Q
    |    
T  22188755 a 22188755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 37873841 - 37873738
Alignment:
Q  294 ccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatg 391  Q
    ||||||| ||||||| ||| |||||||||||| || ||||||||||||| ||  |||||  || ||  |||||||| ||||| |||||||| ||||||||    
T  37873841 ccgctaggccttttttgatagcaaaatcaatcctcttaaacacaacattcatagacctagaagtcatgacattgttctgcatgaccctttgaactctatg 37873742  T
Q  392 taga 395  Q
    ||||    
T  37873741 taga 37873738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 8100619 - 8100666
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttga 436  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  8100619 atgtaaattgtcacaacacgttttctcatgtttgaccattttacttga 8100666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 27336759 - 27336818
Alignment:
Q  388 tatgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    ||||| |||||||| |||||| ||||||||||||||||| ||| |||||| |||||||||    
T  27336759 tatgttgattgtcagaacacgatttctcatgtttgaccactttgcttgacgcaactttta 27336818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 11005763 - 11005825
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacaca 337  Q
    |||||| ||||||||| ||||||||  |||||||||||||||||| ||||| | |||||||||    
T  11005763 aagcgggcaacaagctgcgccgctaagcctttttggatggcaaaaccaatcctagtaaacaca 11005825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 15292259 - 15292165
Alignment:
Q  263 tgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagaga 357  Q
    ||||||| ||| ||| || |||||| || |||||| |  | |||||||||||||||||||||| || ||||||||||||| ||| ||||| ||||    
T  15292259 tgaatagaaggcaagtgggcaacaaactgcgccgccaagcttttttggatggcaaaatcaatcctcataaacacaacattcatggacctaggaga 15292165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 37873678 - 37873620
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||| ||| ||| |||||| |||||||||    
T  37873678 atgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaactttta 37873620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 14423591 - 14423667
Alignment:
Q  294 ccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatg 370  Q
    |||||||| ||||||||||||||||| ||||| | || ||||||  ||||||| ||||||||||||  |||||||||||    
T  14423591 ccgctagatctttttggatggcaaaaccaatccttgtgaacaca--atttatggacctaagagacatgacattgttatg 14423667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 15506830 - 15506770
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||||| | ||||| ||| ||||||| ||||| |||||||||| ||||||||||||||||    
T  15506830 caacaagttgcgccgttaggccttttttgatggtaaaatcaatcctcgtaaacacaacatt 15506770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 453
Target Start/End: Original strand, 43129601 - 43129665
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactg 453  Q
    |||| |||||||| |||||| ||||||||||||||||| ||| |||||| || |||||| |||||    
T  43129601 atgttgattgtcagaacacgttttctcatgtttgaccactttgcttgacgcatcttttaggactg 43129665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 8100445 - 8100507
Alignment:
Q  281 acaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacattta 344  Q
    |||||||||| |||| |||| | |||||||||||||||||||||| ||| ||| ||||||||||    
T  8100445 acaacaagctgcgccactaggcttttttggatggcaaaatcaatcatcgcaaa-acaacattta 8100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 18176759 - 18176877
Alignment:
Q  235 aatattaactattaatattacttaca--catgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaa 332  Q
    |||||| ||||| |||||||||||||  ||||||||||||| |||||  ||| |   ||| ||| || ||||||||  ||| |||||| |||  ||||||    
T  18176759 aatatttactatcaatattacttacatacatgaataggagggaagcgagcaatactttacaccgttaaacctttttaaatgacaaaattaattatcgtaa 18176858  T
Q  333 acacaacatttatgtacct 351  Q
    |||||||||||||| ||||    
T  18176859 acacaacatttatgaacct 18176877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 433373 - 433419
Alignment:
Q  403 aacacgctttctcatgtttgaccattttacttgacacaacttttaag 449  Q
    |||||||||||||||||||| ||| ||| ||||||||| ||||||||    
T  433373 aacacgctttctcatgtttggccactttgcttgacacagcttttaag 433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 34475953 - 34476003
Alignment:
Q  302 cctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    |||||||||| || |||| |||||||||||||||||||||| ||| |||||    
T  34475953 cctttttggacggaaaaaacaatcttcgtaaacacaacattcatggaccta 34476003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 12033346 - 12033383
Alignment:
Q  305 ttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  12033346 ttttggatggcaaaaccaatcatcgtaaacacaacatt 12033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 23092694 - 23092763
Alignment:
Q  265 aataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaac 334  Q
    ||||| ||| |||| |||||||| || ||  |||||||||| ||||||| ||||||||||| ||||||||    
T  23092694 aatagaaggcaagcagacaacaaactgcgttgctagaccttgttggatgacaaaatcaatcctcgtaaac 23092763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 23424083 - 23424030
Alignment:
Q  285 caagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaa 338  Q
    |||||| | ||| ||||| |||||||||| |||||||||||||| |||||||||    
T  23424083 caagctgcaccgatagacatttttggatgacaaaatcaatcttcataaacacaa 23424030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 8858983 - 8859031
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgac 437  Q
    |||| |||||||| |||||||||||||||||||||| | ||| ||||||    
T  8858983 atgttgattgtcagaacacgctttctcatgtttgactactttgcttgac 8859031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43115497 - 43115461
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgacc 425  Q
    |||| |||||||||||||||||||||||| |||||||    
T  43115497 atgttgattgtcaaaacacgctttctcatatttgacc 43115461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 395
Target Start/End: Original strand, 28224846 - 28225007
Alignment:
Q  236 atattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    ||||| ||||| ||||||||||||| |||||||||||  |||||| ||| ||||| ||||||||||||||||||||||||||||  ||||||| ||||||    
T  28224846 atatttactatcaatattacttacaaatgaataggagacaagcgggcaataagctgcgccgctagacctttttggatggcaaaacaaatcttcataaaca 28224945  T
Q  336 caacatttatgtacctaagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    ||||||| ||  ||||| |||||  || ||||| |||||||| |||||||||||||||||||    
T  28224946 caacattcattgacctaggagacataatattgtcatgcataatcctttggactctatgtaga 28225007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 17344499 - 17344645
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||| | ||||||||| ||||| ||||||||||||||| | |||||||||| |||||||||||||||| ||| |||    
T  17344499 attatttacacttgaatagaaggcaagccggcaacaagctgcgccgatagacctttttggatcgaaaaatcaatcctcgtaaacacaacattcatggacc 17344598  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||||||||||| ||| |||| ||||||||||||    
T  17344599 taggagacatgacattgttatgcatgaccttttgaactctatgtaga 17344645  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 244 - 381
Target Start/End: Original strand, 27494165 - 27494304
Alignment:
Q  244 tattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacattt 343  Q
    ||||||||||||||||| |||||||||||| |||| | ||||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||| |||     
T  27494165 tattaatattacttacatatgaataggaggcaagcaggcaacaagctgcgccgttagacctttttggatggcaaaaccaatattcgtaaacacaatattc 27494264  T
Q  344 atgtacctaagagac--aacattgttatgcataacccttt 381  Q
    ||  || || |||||  ||||||| ||| |||||||||||    
T  27494265 atagacttaggagacataacattgctatacataacccttt 27494304  T

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Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 4413312 - 4413166
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| ||| || ||||||||| |||||||||||||||||||||||||||||||||| || | ||||||||||| ||| |||    
T  4413312 attatttacacttgaatagaaggcaagtgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcatgaacacaacattcatggacc 4413213  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  || ||| ||||||| ||| |||| || |||||||||    
T  4413212 taggagacatgactttgctatgcatgaccttttgaaccctatgtaga 4413166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 13413212 - 13413358
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||  ||||||||||||||||  |||| ||| |||||||||||||||||| ||||  || ||||||||||||| ||| |||    
T  13413212 attatttacacttgaatagaagacaagcggacaacaagctgagccgttaggcctttttggatggcaaaaccaattctcataaacacaacattcatggacc 13413311  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||||||||||| ||| |||| ||||||||||||    
T  13413312 taggagacatgacattgttatgcatgaccttttgaactctatgtaga 13413358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 275 - 395
Target Start/End: Complemental strand, 9685637 - 9685515
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgca 372  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||| ||| ||||| ||||||  |||||| ||| ||    
T  9685637 aagcgggcaacaagctgcgccgctagacctttttggatggcaaaaacaatctttgtgaacacaacattcatggacctaggagacatgacattgctatcca 9685538  T
Q  373 taaccctttggactctatgtaga 395  Q
    | ||| |||| ||||||| ||||    
T  9685537 tgaccttttgaactctatataga 9685515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 251 - 395
Target Start/End: Complemental strand, 41868153 - 41868008
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| | | |||||| ||||||| | |||||||||| |||||||| |||||||| ||||| |||||||||||||||| ||| |||    
T  41868153 attatttacacttgaatagaaagcaagcgggcaacaagttgcgccgctagatctttttgg-tggcaaaaccaatcctcgtaaacacaacattcatggacc 41868055  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |  ||||||  |||||||||||||| ||| |||| ||||||||||||    
T  41868054 tgggagacatgacattgttatgcatgaccttttgaactctatgtaga 41868008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 27502269 - 27502369
Alignment:
Q  297 ctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtag 394  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||  | ||| ||||||  | |||| |||||||||||||||||| |||||||||    
T  27502269 ctagacctttttggattgcaaaatcaatcttcgtaaacacaacattcatagatctaggagacatgatattgctatgcataaccctttggattctatgtag 27502368  T
Q  395 a 395  Q
    |    
T  27502369 a 27502369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 3208490 - 3208406
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaaca 335  Q
    |||| |||||| ||||||| ||| |||||| ||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||    
T  3208490 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctaaacctttttggatggcaaaaccaatcctcgtaaaca 3208406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 2626093 - 2626002
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||| ||||||||| | ||| |  |||| |||||||||||||||||||||    
T  2626093 attaattacacatgaatagaaggcaagcggacaacaagctgcgccgttagacctttgtagatagttaaattaatcttcgtaaacacaacatt 2626002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 27585594 - 27585526
Alignment:
Q  163 tgctatatatcacgattaaatacttcacgaataaatcatgaatcacatgtattccatagttgttaacca 231  Q
    ||||||||| ||| ||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||    
T  27585594 tgctatataccacaattaaatacttcaagaataaatcacgaatcacatatattccatagtttttaacca 27585526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 304 - 395
Target Start/End: Complemental strand, 16352037 - 16351944
Alignment:
Q  304 tttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    ||||| |||||||||| ||||| ||||||||| || ||| ||||||||||||||||  |||||||| ||||| ||| |||| ||||||||||||    
T  16352037 tttttagatggcaaaaacaatcatcgtaaacataatattcatgtacctaagagacatgacattgttgtgcatgaccatttgaactctatgtaga 16351944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 41702133 - 41702207
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatc 325  Q
    ||||||||||||||||||| ||| ||| || ||||||||| |||| |||| |||||||||||||||||| |||||    
T  41702133 attacttacacatgaatagaaggcaagtgggcaacaagctgcgccactaggcctttttggatggcaaaaccaatc 41702207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 10587201 - 10587144
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagaccttttt 308  Q
    ||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||||    
T  10587201 attacttacacatgaatagaaggcaaacgggcaacaagctacgccgctagaccttttt 10587144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 251 - 336
Target Start/End: Original strand, 42122678 - 42122763
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacac 336  Q
    |||| |||||| ||||||| ||| ||||| |||| ||||| ||||||||||| |||||||||||||||| || || ||||||||||    
T  42122678 attatttacacttgaatagaaggcaagcgaacaataagctgcgccgctagacttttttggatggcaaaaccagtcctcgtaaacac 42122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 30602350 - 30602430
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgta 331  Q
    |||| |||||||||||||| ||| | |||| ||||||||| ||| ||||| |||||||||||||||||| ||||| |||||    
T  30602350 attaattacacatgaatagaaggcatgcgggcaacaagctgcgctgctaggcctttttggatggcaaaaccaatcctcgta 30602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 18745200 - 18745109
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||| |||||| ||||||| ||  |||||  ||| ||||| |||||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  18745200 attatttacacttgaatagaagacaagcgagcaataagctgcgccgctagacctttttggatggcaaaaccaatccttataaacacaacatt 18745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 2224047 - 2224116
Alignment:
Q  163 tgctatatatcacgattaaatacttcacgaataaatcatgaatcacatgtattccatagttgttaaccat 232  Q
    ||||||||| |||||||||||| |||| |||||||||| ||||||||| |||| ||||||| || |||||    
T  2224047 tgctatataccacgattaaatatttcaagaataaatcacgaatcacatatatttcatagtttttgaccat 2224116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 38724054 - 38723985
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacct 304  Q
    |||||| ||||| |||||||||||||||| ||||||||| |||||  ||||||||| | |||||||||||    
T  38724054 aatatttactatcaatattacttacacataaataggaggcaagcgagcaacaagctgcaccgctagacct 38723985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 15515362 - 15515302
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||||| || ||||||||||| |||||||||||||||| ||||| |||| |||||||||||    
T  15515362 caacaaactgcgccgctagacttttttggatggcaaaaccaatcctcgtgaacacaacatt 15515302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 395
Target Start/End: Original strand, 44686348 - 44686423
Alignment:
Q  322 aatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    |||| |||||||||||||||| | | ||||| ||||||  |||||| |||||||||||||||||| ||||||||||    
T  44686348 aatcctcgtaaacacaacattcacggacctaggagacataacattgctatgcataaccctttggaatctatgtaga 44686423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 11921436 - 11921349
Alignment:
Q  265 aataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    ||||||||| ||||||  |||||||| || ||||||| ||||||||||||| |||  |||| | |||||||||||||| ||| |||||    
T  11921436 aataggagggaagcgggtaacaagctgcgacgctagatctttttggatggcgaaactaatcctagtaaacacaacattcatggaccta 11921349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 4413106 - 4413048
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  4413106 atgttgattgtcagaacacgctttctcatgtttggccactttgcttgacacagctttta 4413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 393
Target Start/End: Complemental strand, 19162005 - 19161885
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgca 372  Q
    ||||||||| |||||| |||| |||   ||||||||||| ||||||||||| ||| |||||||  ||| ||  ||||| ||||||  |||||| ||||||    
T  19162005 aagcggacagcaagctgcgccactacgtctttttggatgacaaaatcaatcctcgaaaacacactattcattgacctaggagacatgacattgatatgca 19161906  T
Q  373 taaccctttggactctatgta 393  Q
    | ||| |||| ||||||||||    
T  19161905 tgaccttttgaactctatgta 19161885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 454
Target Start/End: Complemental strand, 41867948 - 41867883
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactgc 454  Q
    |||| |||||||| |||| ||||||||||||||||||| ||| |||||| || |||||||| ||||    
T  41867948 atgttgattgtcagaacatgctttctcatgtttgaccactttgcttgacgcagcttttaaggctgc 41867883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 20143179 - 20143123
Alignment:
Q  263 tgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaa 319  Q
    ||||||| ||| || | ||||||||| | ||||||||||||||||||||||||||||    
T  20143179 tgaatagaaggcaaacagacaacaagttgcgccgctagacctttttggatggcaaaa 20143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 526
Target Start/End: Original strand, 2224176 - 2224207
Alignment:
Q  495 atattcacttttattttgtccctcgtgcaaca 526  Q
    ||||||||||||||||||||||||||||||||    
T  2224176 atattcacttttattttgtccctcgtgcaaca 2224207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 3825639 - 3825682
Alignment:
Q  303 ctttttggatggcaaaatcaatcttcgtaaacacaacatttatg 346  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||    
T  3825639 ctttttggatgacaaaatcgatcttcataaacacaacatttatg 3825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 13147132 - 13147089
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttgac 437  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||    
T  13147132 gattgtcagaacacgctttctcatgtttgaccacttttcttgac 13147089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 16351882 - 16351823
Alignment:
Q  388 tatgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    ||||| |||||| | |||||  ||||||||||||||||| ||| ||||||||||||||||    
T  16351882 tatgttgattgtgagaacacattttctcatgtttgaccactttgcttgacacaactttta 16351823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 395
Target Start/End: Complemental strand, 32029308 - 32029186
Alignment:
Q  275 aagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgca 372  Q
    |||| ||||| || |||||||||||  |||||||| ||| || ||| ||||||||||||||| | ||| |||  ||||  |||||  ||||||||||| |    
T  32029308 aagcagacaataaactacgccgctatgcctttttgaatgacagaattaatcttcgtaaacacgatattcatgatcctataagacatgacattgttatgga 32029209  T
Q  373 taaccctttggactctatgtaga 395  Q
    | || ||||| ||||||||||||    
T  32029208 tgactctttgaactctatgtaga 32029186  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 5532486 - 5532544
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||| ||||||||||||||||| ||| |||||| || ||||||    
T  5532486 atgttgattgtcacaacacgttttctcatgtttgaccactttgcttgacgcagctttta 5532544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 7761050 - 7760945
Alignment:
Q  292 cgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccctttggactcta 389  Q
    ||||||||  |||||||||||| |||||||||| ||||||| |||| ||||  || || || ||||||  |||||| || |||| | |||||| ||||||    
T  7761050 cgccgctaagcctttttggatgtcaaaatcaattttcgtaagcacatcattcttgaacttatgagacatcacattgctacgcatgatcctttgaactcta 7760951  T
Q  390 tgtaga 395  Q
    ||||||    
T  7760950 tgtaga 7760945  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 393
Target Start/End: Complemental strand, 23485159 - 23485038
Alignment:
Q  275 aagcggacaacaagctacgccgctagaccttttt-ggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagac--aacattgttatgc 371  Q
    |||| ||||||||||| |||||  | |||||||| || |||||||| |||| || ||||||||||| || ||| ||||| |||||  | |||||||||||    
T  23485159 aagccgacaacaagctgcgccgtcaaaccttttttggttggcaaaaccaatttttgtaaacacaacgttcatggacctaggagacatagcattgttatgc 23485060  T
Q  372 ataaccctttggactctatgta 393  Q
    || | | |||| ||||||||||    
T  23485059 atgatcttttgaactctatgta 23485038  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 19514202 - 19514239
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacg 293  Q
    |||||||||||||| | |||||||||||||||||||||    
T  19514202 ttacacatgaatagaaagtaagcggacaacaagctacg 19514239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 26407896 - 26407839
Alignment:
Q  295 cgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtaccta 352  Q
    ||||| || |||| |||| |||||||||||| |||||||||||||||| ||| |||||    
T  26407896 cgctaaacattttaggatagcaaaatcaatcatcgtaaacacaacattcatgaaccta 26407839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 535
Target Start/End: Complemental strand, 27585465 - 27585425
Alignment:
Q  495 atattcacttttattttgtccctcgtgcaacagacttagtt 535  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  27585465 atattcacttttattttgtccctcctgcaacaaccttagtt 27585425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 34250249 - 34250153
Alignment:
Q  235 aatattaactattaatattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgta 331  Q
    |||||| | ||| ||||||||||||||||||||| |||| || | ||||||||  | |||   |||| ||||||||||| |||||| |||| |||||    
T  34250249 aatatttaatatcaatattacttacacatgaatatgaggcaaaccgacaacaaattgcgctattagatctttttggatgacaaaattaatcctcgta 34250153  T

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Target: scaffold0009 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 102967 - 103113
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||    
T  102967 attatttacacttgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacc 103066  T
Q  351 taagagaca--acattgttatgcataaccctttggactctatgtaga 395  Q
    || ||||||  |||||||||||||| ||| ||||  ||| |||||||    
T  103067 taggagacacgacattgttatgcatgaccttttgagctcgatgtaga 103113  T

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Target: scaffold0309 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 5185 - 5277
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacattt 343  Q
    |||| |||||| ||||||| | | |||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  5185 attatttacacttgaatagaatgcaagcgggcaacaagctgcgccgctagacctttttggatggcaaagtcaatcctcgtgaacacaacattt 5277  T

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Target: scaffold0406 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 6754 - 6844
Alignment:
Q  256 ttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatg 346  Q
    |||||| ||||||| ||| |||||| ||||||||| || ||||||||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  6754 ttacacttgaatagaaggcaagcgggcaacaagctgcggcgctagacctttttggatggcaaaaccaattctcgtaaacacaacttttatg 6844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 18421 - 18489
Alignment:
Q  163 tgctatatatcacgattaaatacttcacgaataaatcatgaatcacatgtattccatagttgttaacca 231  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||||| |||| ||||||| |||||||    
T  18421 tgctatataccacgattaaatacttcaagaataaatcacgaatcacatatatttcatagtttttaacca 18489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 535
Target Start/End: Original strand, 18550 - 18590
Alignment:
Q  495 atattcacttttattttgtccctcgtgcaacagacttagtt 535  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  18550 atattcacttttattttgtccctcctgcaacaaccttagtt 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 395
Target Start/End: Original strand, 33111 - 33257
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacc 350  Q
    |||| |||||| ||||||| ||| |||| | ||||||||| | |||| |  |||||||||||| ||||||||||| |||||||||| || || ||| |||    
T  33111 attatttacacttgaatagaaggcaagcaggcaacaagctgcaccgccaagcctttttggatgacaaaatcaatcctcgtaaacacgacgttcatggacc 33210  T
Q  351 taagagac--aacattgttatgcataaccctttggactctatgtaga 395  Q
    || |||||  || |||| ||||||| ||| |||| ||||||||||||    
T  33211 taggagacataaaattgctatgcatgaccttttgaactctatgtaga 33257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 392
Target Start/End: Original strand, 49307 - 49419
Alignment:
Q  282 caacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca--acattgttatgcataaccct 379  Q
    ||||||| | |||||||||||| |||| ||||| |||||||||  ||||||| || ||||| ||| || |||||||||  |||||||||||||| | |||    
T  49307 caacaagttgcgccgctagaccgttttagatggaaaaatcaattctcgtaaatactacattcatggacataagagacatgacattgttatgcatgatcct 49406  T
Q  380 ttggactctatgt 392  Q
    ||| |||||||||    
T  49407 ttgaactctatgt 49419  T

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Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 17468 - 17392
Alignment:
Q  306 tttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagacaacattgttatgcataaccctttg 382  Q
    ||||||| |||||| ||||| || ||||||||||||| ||| ||||||||||||||||| |||||||| ||| ||||    
T  17468 tttggatagcaaaagcaatcatcttaaacacaacattcatggacctaagagacaacattattatgcatgaccatttg 17392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 6401 - 6459
Alignment:
Q  389 atgtagattgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    |||| |||||||| |||||||||||||||||||| ||| |||||||||| |||||||||    
T  6401 atgttgattgtcagaacacgctttctcatgtttggccactttacttgacgcaactttta 6459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 47766 - 47675
Alignment:
Q  251 attacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    ||||||||||| ||||||| ||  || ||||||||||| |  ||||||| || ||||| ||||| |||||||||||| ||||||| ||||||    
T  47766 attacttacacgtgaatagaagacaaacggacaacaagttgtgccgctaaacatttttcgatggtaaaatcaatctttgtaaacataacatt 47675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 447
Target Start/End: Complemental strand, 47571 - 47521
Alignment:
Q  397 tgtcaaaacacgctttctcatgtttgaccattttacttgacacaactttta 447  Q
    ||||| |||||  ||||||||||||| |||||||||||||| |||||||||    
T  47571 tgtcagaacacattttctcatgtttggccattttacttgacgcaactttta 47521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 456
Target Start/End: Original strand, 10436 - 10498
Alignment:
Q  394 gattgtcaaaacacgctttctcatgtttgaccattttacttgacacaacttttaagactgctt 456  Q
    |||||||| ||||||| || ||||||||| |||||||||||||| ||||||||| | ||||||    
T  10436 gattgtcagaacacgcattatcatgtttggccattttacttgacgcaacttttagggctgctt 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 16857 - 16809
Alignment:
Q  294 ccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 342  Q
    |||||||||||||||||||||||||||||||  |||| || ||||||||    
T  16857 ccgctagacctttttggatggcaaaatcaattctcgtgaatacaacatt 16809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 4451 - 4385
Alignment:
Q  293 gccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    ||||||||| |||| | |||| ||||| |||| ||||||||||||||||||||| || || ||||||    
T  4451 gccgctagatctttcttgatgacaaaaccaatattcgtaaacacaacatttatggacttatgagaca 4385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 431 - 342
Alignment:
Q  250 tattacttacacatgaataggaggtaagcggacaacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaac 339  Q
    ||||| |||||| ||||||| ||| |||| | ||||||| | |||| | |  ||||||||||||||||||  |||| |||||||||||||    
T  431 tattatttacacttgaatagaaggaaagccggcaacaagatgcgccacaaagcctttttggatggcaaaactaatcctcgtaaacacaac 342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 7496 - 7572
Alignment:
Q  283 aacaagctacgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatttatgtacctaagagaca 359  Q
    ||||||||  |||| |||| ||||||||||| ||||| ||||  ||||||||| |||||| ||| ||||| ||||||    
T  7496 aacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagaca 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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