View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0979-INSERTION-51 (Length: 302)

Name: NF0979-INSERTION-51
Description: NF0979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0979-INSERTION-51
NF0979-INSERTION-51
[»] chr5 (37 HSPs)
chr5 (195-302)||(4371362-4371470)
chr5 (195-302)||(166695-166803)
chr5 (195-302)||(34171163-34171270)
chr5 (195-296)||(27810345-27810447)
chr5 (195-302)||(38982191-38982299)
chr5 (202-295)||(15400177-15400271)
chr5 (195-302)||(13066712-13066820)
chr5 (195-302)||(793650-793760)
chr5 (195-302)||(33585019-33585129)
chr5 (195-296)||(4742318-4742421)
chr5 (195-296)||(4751582-4751685)
chr5 (202-302)||(29653558-29653661)
chr5 (195-289)||(36660426-36660521)
chr5 (195-302)||(42329590-42329700)
chr5 (202-302)||(32690777-32690878)
chr5 (202-302)||(33822547-33822650)
chr5 (215-302)||(4833677-4833767)
chr5 (195-302)||(12992063-12992169)
chr5 (215-302)||(39059825-39059912)
chr5 (201-302)||(36783360-36783462)
chr5 (202-296)||(28640088-28640183)
chr5 (195-296)||(17674207-17674309)
chr5 (213-283)||(32963074-32963143)
chr5 (195-262)||(14980125-14980193)
chr5 (195-245)||(31889741-31889791)
chr5 (232-302)||(27652365-27652436)
chr5 (240-302)||(29044764-29044827)
chr5 (195-245)||(4011740-4011790)
chr5 (211-295)||(33741480-33741565)
chr5 (202-262)||(43257937-43257998)
chr5 (195-272)||(31557411-31557489)
chr5 (202-262)||(16886091-16886152)
chr5 (195-270)||(28316712-28316787)
chr5 (202-256)||(41845374-41845429)
chr5 (195-278)||(7731663-7731747)
chr5 (215-302)||(36296178-36296266)
chr5 (195-239)||(27658682-27658726)
[»] chr7 (37 HSPs)
chr7 (202-302)||(19920318-19920419)
chr7 (202-302)||(5723009-5723109)
chr7 (211-302)||(34002179-34002271)
chr7 (195-301)||(1103483-1103590)
chr7 (195-301)||(40298846-40298953)
chr7 (195-302)||(17869236-17869344)
chr7 (195-302)||(42259595-42259702)
chr7 (195-302)||(19906413-19906521)
chr7 (195-302)||(41905981-41906088)
chr7 (202-302)||(42044024-42044127)
chr7 (195-302)||(3680969-3681077)
chr7 (195-291)||(26963478-26963575)
chr7 (195-296)||(30514972-30515076)
chr7 (216-296)||(30833146-30833227)
chr7 (195-291)||(32345893-32345990)
chr7 (195-302)||(31416796-31416906)
chr7 (202-291)||(19288405-19288495)
chr7 (195-302)||(18733452-18733562)
chr7 (195-302)||(36447115-36447225)
chr7 (215-296)||(6521837-6521920)
chr7 (216-302)||(39117534-39117622)
chr7 (215-291)||(10684888-10684965)
chr7 (216-302)||(33845456-33845544)
chr7 (195-263)||(43813430-43813499)
chr7 (195-262)||(22597229-22597297)
chr7 (216-283)||(26527462-26527530)
chr7 (195-262)||(33056362-33056432)
chr7 (202-262)||(22627431-22627494)
chr7 (195-272)||(32873241-32873318)
chr7 (195-291)||(36836058-36836154)
chr7 (261-302)||(48838731-48838772)
chr7 (195-262)||(28044218-28044286)
chr7 (195-262)||(32275203-32275271)
chr7 (202-245)||(40805030-40805073)
chr7 (195-245)||(42121549-42121599)
chr7 (195-261)||(36447689-36447756)
chr7 (195-245)||(18886668-18886718)
[»] chr6 (24 HSPs)
chr6 (211-296)||(11785155-11785240)
chr6 (195-302)||(30627089-30627197)
chr6 (195-295)||(29915539-29915641)
chr6 (195-302)||(31275687-31275796)
chr6 (195-302)||(4123901-4124009)
chr6 (195-302)||(12828727-12828835)
chr6 (195-287)||(29927205-29927299)
chr6 (195-302)||(6140598-6140707)
chr6 (195-302)||(8052343-8052450)
chr6 (195-302)||(17345180-17345290)
chr6 (195-281)||(4132042-4132129)
chr6 (195-302)||(6143082-6143192)
chr6 (195-302)||(10494808-10494916)
chr6 (216-291)||(26189527-26189603)
chr6 (195-302)||(34576542-34576652)
chr6 (202-302)||(26669144-26669245)
chr6 (195-283)||(30626867-30626956)
chr6 (195-283)||(34439479-34439567)
chr6 (195-302)||(32258720-32258830)
chr6 (215-301)||(25932646-25932736)
chr6 (202-296)||(3015921-3016012)
chr6 (195-294)||(19689890-19689988)
chr6 (196-289)||(23936641-23936735)
chr6 (195-262)||(1924751-1924818)
[»] chr3 (52 HSPs)
chr3 (195-302)||(37225641-37225749)
chr3 (195-302)||(83295-83402)
chr3 (195-295)||(46363063-46363165)
chr3 (195-286)||(2988672-2988763)
chr3 (211-301)||(22730940-22731031)
chr3 (204-302)||(35099412-35099511)
chr3 (195-302)||(50420258-50420365)
chr3 (195-302)||(54933249-54933359)
chr3 (211-296)||(32303955-32304043)
chr3 (202-295)||(43600245-43600337)
chr3 (202-301)||(43687928-43688033)
chr3 (195-287)||(44854314-44854406)
chr3 (216-302)||(38457480-38457567)
chr3 (195-302)||(43580474-43580584)
chr3 (195-302)||(3000751-3000860)
chr3 (195-296)||(43169333-43169437)
chr3 (195-296)||(54261414-54261518)
chr3 (195-302)||(27027732-27027840)
chr3 (211-302)||(41287091-41287185)
chr3 (216-302)||(647638-647725)
chr3 (203-302)||(15514771-15514872)
chr3 (195-302)||(36310295-36310404)
chr3 (202-302)||(25722505-25722608)
chr3 (195-291)||(53560664-53560760)
chr3 (195-286)||(51381720-51381813)
chr3 (202-286)||(44645344-44645429)
chr3 (195-302)||(4391903-4392011)
chr3 (195-302)||(5244585-5244692)
chr3 (195-291)||(20512553-20512651)
chr3 (216-296)||(36541511-36541594)
chr3 (196-262)||(27483270-27483337)
chr3 (195-262)||(19552539-19552607)
chr3 (202-302)||(22414761-22414861)
chr3 (195-262)||(26965585-26965653)
chr3 (195-262)||(34059875-34059943)
chr3 (195-262)||(36771653-36771721)
chr3 (216-302)||(27039347-27039434)
chr3 (211-293)||(42857114-42857197)
chr3 (195-258)||(44648492-44648555)
chr3 (195-302)||(49470788-49470898)
chr3 (195-245)||(790095-790145)
chr3 (202-256)||(35239392-35239446)
chr3 (220-273)||(52222820-52222874)
chr3 (216-281)||(42007129-42007194)
chr3 (202-262)||(45095559-45095618)
chr3 (195-261)||(2568090-2568157)
chr3 (195-245)||(13485909-13485959)
chr3 (195-245)||(25061703-25061753)
chr3 (212-257)||(31291055-31291101)
chr3 (211-245)||(38165746-38165780)
chr3 (202-262)||(1341006-1341067)
chr3 (196-245)||(53716029-53716078)
[»] chr4 (48 HSPs)
chr4 (202-291)||(28116247-28116337)
chr4 (195-302)||(19849079-19849187)
chr4 (202-302)||(45520507-45520607)
chr4 (195-301)||(6510113-6510220)
chr4 (211-302)||(17317891-17317984)
chr4 (195-302)||(30022063-30022171)
chr4 (195-302)||(24259606-24259716)
chr4 (202-302)||(31987306-31987407)
chr4 (195-292)||(29840070-29840169)
chr4 (195-291)||(19282469-19282567)
chr4 (203-302)||(44855245-44855347)
chr4 (195-296)||(22212336-22212438)
chr4 (195-291)||(31941553-31941650)
chr4 (211-301)||(34096026-34096118)
chr4 (195-296)||(34124290-34124394)
chr4 (195-302)||(47321139-47321250)
chr4 (195-286)||(17499782-17499874)
chr4 (195-302)||(37445655-37445763)
chr4 (211-297)||(30492739-30492826)
chr4 (211-289)||(38761886-38761964)
chr4 (195-289)||(35928486-35928581)
chr4 (195-302)||(51434304-51434414)
chr4 (195-296)||(54091953-54092055)
chr4 (217-302)||(45889580-45889668)
chr4 (195-281)||(6462004-6462094)
chr4 (202-302)||(11835109-11835208)
chr4 (202-302)||(29289940-29290040)
chr4 (212-296)||(44835346-44835432)
chr4 (214-296)||(42672404-42672486)
chr4 (195-262)||(52732594-52732663)
chr4 (195-302)||(4408224-4408335)
chr4 (195-256)||(39671177-39671238)
chr4 (195-262)||(43421204-43421272)
chr4 (195-270)||(55548305-55548380)
chr4 (195-245)||(15501252-15501302)
chr4 (195-245)||(56556360-56556410)
chr4 (202-302)||(45903454-45903555)
chr4 (195-268)||(6232116-6232191)
chr4 (197-296)||(55126494-55126596)
chr4 (195-245)||(21045151-21045201)
chr4 (195-245)||(32141069-32141119)
chr4 (195-245)||(50072276-50072326)
chr4 (215-254)||(54233861-54233900)
chr4 (195-262)||(32141211-32141280)
chr4 (195-245)||(51930595-51930645)
chr4 (195-256)||(31817271-31817331)
chr4 (202-302)||(45049711-45049812)
chr4 (216-263)||(36805531-36805579)
[»] chr2 (31 HSPs)
chr2 (197-302)||(7743401-7743507)
chr2 (202-302)||(4840773-4840874)
chr2 (195-296)||(43388709-43388811)
chr2 (195-302)||(2459771-2459881)
chr2 (195-286)||(25332569-25332660)
chr2 (195-302)||(33093366-33093476)
chr2 (195-291)||(10580915-10581012)
chr2 (195-281)||(18374831-18374918)
chr2 (161-291)||(41984382-41984513)
chr2 (195-302)||(775930-776039)
chr2 (195-302)||(4536572-4536677)
chr2 (212-289)||(36360432-36360510)
chr2 (221-302)||(37106886-37106968)
chr2 (195-302)||(1360175-1360283)
chr2 (211-296)||(24775203-24775289)
chr2 (202-302)||(1298826-1298927)
chr2 (216-296)||(43460792-43460873)
chr2 (211-302)||(16316723-16316815)
chr2 (202-296)||(39866723-39866820)
chr2 (195-296)||(43344275-43344375)
chr2 (195-262)||(29795276-29795344)
chr2 (202-302)||(4566167-4566270)
chr2 (196-301)||(14511459-14511565)
chr2 (195-302)||(6591963-6592072)
chr2 (195-245)||(34225771-34225821)
chr2 (202-262)||(40987357-40987418)
chr2 (195-248)||(45148053-45148106)
chr2 (202-245)||(14378328-14378371)
chr2 (195-259)||(1381748-1381813)
chr2 (196-245)||(4766292-4766341)
chr2 (218-262)||(40410473-40410518)
[»] chr8 (35 HSPs)
chr8 (195-295)||(27109874-27109975)
chr8 (195-302)||(9022393-9022501)
chr8 (195-302)||(22601134-22601241)
chr8 (202-302)||(8382524-8382625)
chr8 (195-302)||(42946120-42946228)
chr8 (211-301)||(5588521-5588612)
chr8 (202-302)||(32326771-32326873)
chr8 (195-302)||(7612496-7612604)
chr8 (197-302)||(34461628-34461737)
chr8 (195-302)||(14541792-14541900)
chr8 (201-296)||(32661309-32661405)
chr8 (195-302)||(11257540-11257646)
chr8 (196-296)||(30788934-30789035)
chr8 (195-291)||(35052469-35052566)
chr8 (195-302)||(39970323-39970431)
chr8 (202-302)||(13108993-13109095)
chr8 (197-302)||(3095550-3095656)
chr8 (202-291)||(27416506-27416594)
chr8 (161-289)||(36915331-36915460)
chr8 (202-302)||(34168258-34168353)
chr8 (213-302)||(43938136-43938227)
chr8 (195-263)||(38329115-38329184)
chr8 (216-300)||(5044275-5044361)
chr8 (202-291)||(18673157-18673247)
chr8 (195-245)||(29931336-29931386)
chr8 (195-247)||(2803340-2803392)
chr8 (195-245)||(45187389-45187439)
chr8 (202-262)||(16208955-16209016)
chr8 (202-256)||(41790209-41790265)
chr8 (195-258)||(1774150-1774214)
chr8 (195-245)||(156239-156289)
chr8 (215-245)||(2812828-2812858)
chr8 (211-245)||(8107264-8107298)
chr8 (195-245)||(8471279-8471329)
chr8 (211-259)||(33870768-33870817)
[»] chr1 (47 HSPs)
chr1 (196-295)||(1428865-1428965)
chr1 (211-301)||(28751455-28751546)
chr1 (195-296)||(15698803-15698905)
chr1 (195-295)||(11650056-11650157)
chr1 (202-302)||(44582824-44582927)
chr1 (212-302)||(17919866-17919957)
chr1 (202-286)||(2245791-2245876)
chr1 (195-302)||(12002244-12002352)
chr1 (195-302)||(12851739-12851847)
chr1 (195-302)||(26252116-26252226)
chr1 (232-302)||(672327-672397)
chr1 (195-302)||(254957-255068)
chr1 (195-302)||(5317624-5317731)
chr1 (215-302)||(17806421-17806509)
chr1 (202-301)||(45377197-45377297)
chr1 (195-289)||(2459006-2459101)
chr1 (195-300)||(22664937-22665041)
chr1 (195-301)||(6332164-6332272)
chr1 (202-296)||(50158358-50158454)
chr1 (211-302)||(50349909-50349994)
chr1 (195-302)||(5854270-5854380)
chr1 (196-286)||(11134524-11134614)
chr1 (211-296)||(52403490-52403576)
chr1 (198-294)||(40719016-40719113)
chr1 (197-302)||(42650295-42650402)
chr1 (222-296)||(43929710-43929784)
chr1 (195-296)||(43738306-43738408)
chr1 (215-296)||(44024563-44024647)
chr1 (195-262)||(48259940-48260008)
chr1 (195-285)||(15647126-15647215)
chr1 (202-256)||(43755058-43755112)
chr1 (222-286)||(28200286-28200351)
chr1 (203-281)||(35149447-35149527)
chr1 (195-258)||(48320081-48320144)
chr1 (195-245)||(84598-84648)
chr1 (195-245)||(26582923-26582973)
chr1 (195-245)||(38132272-38132322)
chr1 (202-262)||(40060983-40061044)
chr1 (195-302)||(44583770-44583878)
chr1 (195-245)||(24041105-24041155)
chr1 (196-245)||(1430617-1430666)
chr1 (195-243)||(9552436-9552484)
chr1 (195-245)||(9333105-9333155)
chr1 (195-245)||(9356878-9356928)
chr1 (211-256)||(10691023-10691069)
chr1 (216-245)||(49894825-49894854)
chr1 (215-262)||(37437482-37437530)
[»] scaffold0003 (1 HSPs)
scaffold0003 (195-302)||(321724-321834)
[»] scaffold0886 (1 HSPs)
scaffold0886 (195-296)||(4161-4263)
[»] scaffold0194 (1 HSPs)
scaffold0194 (195-296)||(8156-8260)
[»] scaffold0047 (1 HSPs)
scaffold0047 (195-291)||(70512-70609)
[»] scaffold0189 (1 HSPs)
scaffold0189 (195-301)||(13106-13213)
[»] scaffold0519 (1 HSPs)
scaffold0519 (195-302)||(7746-7852)
[»] scaffold0238 (1 HSPs)
scaffold0238 (202-302)||(16085-16186)
[»] scaffold0119 (1 HSPs)
scaffold0119 (202-302)||(1548-1649)
[»] scaffold0072 (1 HSPs)
scaffold0072 (201-302)||(12127-12220)
[»] scaffold0007 (1 HSPs)
scaffold0007 (241-302)||(158145-158206)


Alignment Details
Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 4371362 - 4371470
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaa-ctttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaatttttttctccaaactttaccctcaataaatactcaaacttttctctcacacaat 4371461  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  4371462 tttcaatgc 4371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 166803 - 166695
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  166803 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 166704  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  166703 tttcaatgc 166695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 34171163 - 34171270
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttttccaactttaccttcaataaatactcaaacttttctctcacagaatt 34171262  T
Q  295 tttaatgc 302  Q
    || |||||    
T  34171263 ttcaatgc 34171270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 27810345 - 27810447
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttttttctcacacaat 27810444  T
Q  294 ttt 296  Q
    |||    
T  27810445 ttt 27810447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 38982299 - 38982191
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  38982299 ttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttctcccaactttaccctcaataaatactcaaacttttctctcgcacaat 38982200  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  38982199 tttcaatgc 38982191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 15400177 - 15400271
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaattt 295  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttttctctcatacaattt 15400271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 13066712 - 13066820
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||  ||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctcaataaatactccaacttttctcttgcacaat 13066811  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  13066812 tttcaatgc 13066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 793760 - 793650
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||  |||||||||||    
T  793760 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactctaccctcaataaatacttaaacttttctctctcacaca 793661  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  793660 attttcaatgc 793650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 33585129 - 33585019
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttc--tctcacaca 291  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||  |||||||||    
T  33585129 ttgttttaaaatgaacgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttctgtctcacaca 33585030  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  33585029 attttcaatgc 33585019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 4742421 - 4742318
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || ||||||||| ||||| |||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4742322  T
Q  293 tttt 296  Q
    ||||    
T  4742321 tttt 4742318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 4751685 - 4751582
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || ||||||||| ||||| |||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  4751685 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4751586  T
Q  293 tttt 296  Q
    ||||    
T  4751585 tttt 4751582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 29653661 - 29653558
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttc--tctcacacaattttta 298  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||  ||||||||||||| ||    
T  29653661 aaaatgaatgtcattttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctctcacacaatttcta 29653562  T
Q  299 atgc 302  Q
    ||||    
T  29653561 atgc 29653558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 36660426 - 36660521
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcaca 289  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||    
T  36660426 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccagcttttctctcaca 36660521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 42329700 - 42329590
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||  ||||||  |||||||||||    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctcacaca 42329601  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  42329600 attttcaatgc 42329590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 32690878 - 32690777
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||  |||||||||||| ||||||||| |||    
T  32690878 aaaatgaatgtcactttacatttcaaatacaactttaatttttttctctcaactttactctcaataaatacttcaacttttctctcgcacaattttcaat 32690779  T
Q  301 gc 302  Q
    ||    
T  32690778 gc 32690777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 33822650 - 33822547
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttc--tctcacacaattttta 298  Q
    ||||| || |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||  |||||||||||||| |    
T  33822650 aaaatgaatgtcactttacattttcaatacaactttaattttgttctttcaactttaccttcaataaatacttcaacttttctctctcacacaattttca 33822551  T
Q  299 atgc 302  Q
    ||||    
T  33822550 atgc 33822547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 4833767 - 4833677
Alignment:
Q  215 ctttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctc--tcacacaatttttaatgc 302  Q
    |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  4833767 ctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctttcacacaattttcaatgc 4833677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 12992063 - 12992169
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || |||| |||||||||| ||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||  |||||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaatttttt-ttccaactttatcctcaataaatactccaacttttctcttgcacaatt 12992161  T
Q  295 tttaatgc 302  Q
    || |||||    
T  12992162 ttcaatgc 12992169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 302
Target Start/End: Original strand, 39059825 - 39059912
Alignment:
Q  215 ctttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| || |||| ||||| |||||||| |||||    
T  39059825 ctttacattttcaatacaactttaattttttcttctaactttaccctcaataaatactccaaattttttctcatacaattttcaatgc 39059912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 36783360 - 36783462
Alignment:
Q  201 aaaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacacaatttttaa 299  Q
    |||||| || ||||||||||||||||||||||||| |||||||||  ||| ||||||||||| | ||||| ||| |||||||||||||||||||||| ||    
T  36783360 aaaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctctcacacaattttcaa 36783459  T
Q  300 tgc 302  Q
    |||    
T  36783460 tgc 36783462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 296
Target Start/End: Original strand, 28640088 - 28640183
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||||| |||||||||||||| |||| ||||||||||||||| ||  |||||||||||||||||||||||  ||||||||||||  ||||||||    
T  28640088 aaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctcaataaatacttcaacttttctctcgaacaatttt 28640183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 17674207 - 17674309
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||| ||| ||||| ||||||||||||||   || ||||||| ||||||||||||||  |||||||||||||||||||    
T  17674207 ttgtttcaaaatgaatgtcactttacgttttcaataaaactttaattttttacgtctaactttatcctcaataaatacttcaacttttctctcacacaat 17674306  T
Q  294 ttt 296  Q
    |||    
T  17674307 ttt 17674309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 32963143 - 32963074
Alignment:
Q  213 cactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttct 283  Q
    |||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||    
T  32963143 cactttacatttccaatacaactttattttttt-ttcaaactttaccctcaataaatactctaacttttct 32963074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 14980193 - 14980125
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctc 262  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14980193 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 14980125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 31889741 - 31889791
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaatttttt 31889791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 27652436 - 27652365
Alignment:
Q  232 aactttaattttttctttcaactttaccctcaataaatactcaaacttttc--tctcacacaatttttaatgc 302  Q
    |||||||||||||| |||||||||||||||||||||||| || ||||||||  |||||||||||||| |||||    
T  27652436 aactttaatttttt-tttcaactttaccctcaataaataatccaacttttctctctcacacaattttcaatgc 27652365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 29044764 - 29044827
Alignment:
Q  240 ttttttctttcaactttaccctcaataaatactcaaacttttctct-cacacaatttttaatgc 302  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||    
T  29044764 ttttttcttccaactttatcctcaataaatgctcaaacttttctctccacacaattttcaatgc 29044827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 4011790 - 4011740
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  4011790 ttgttttaaaatgaacgtcactttacatttccgatacaactttaatttttt 4011740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 33741480 - 33741565
Alignment:
Q  211 gtcactttacatttccaatacaactttaattttttctttcaa-ctttaccctcaataaatactcaaacttttctctcacacaattt 295  Q
    |||||||||||||| |||| ||||||| |||||||  ||||| ||||||||| |||| |||||| |||||||||  ||||||||||    
T  33741480 gtcactttacattttcaatgcaactttcatttttttcttcaaactttacccttaatatatactctaacttttctaccacacaattt 33741565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 43257998 - 43257937
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    ||||| || |||||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  43257998 aaaatgaatgtcactttacatttccaatataactttaatttttttctttcaactttatcctc 43257937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 31557489 - 31557411
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatact 272  Q
    |||||| ||||| || |||| ||||||||| |||||||||||||||| ||||||| ||||||||   ||||||||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatact 31557411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 16886091 - 16886152
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctc 262  Q
    ||||| |||||| |||| ||||| |||||||||||||| ||||||||| |||||||||||||    
T  16886091 aaaatgaacgtcgctttgcattttcaatacaactttaatttttttcttccaactttaccctc 16886152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 28316712 - 28316787
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaata 270  Q
    |||||| |||||||| |||| |||| |||| ||||||||||||||||| || || ||||||||  || ||||||||    
T  28316712 ttgtttcaaaataaatgtcattttatattttcaatacaactttaatttctttttccaactttaaacttaataaata 28316787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 41845429 - 41845374
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaacttt 256  Q
    ||||| || |||||||||||||| |||||||| ||||||| |||||||||||||||    
T  41845429 aaaatgaatgtcactttacattttcaatacaattttaatttttttctttcaacttt 41845374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 7731747 - 7731663
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaactttaccctcaataaatactcaaact 278  Q
    |||||| ||||| || ||||||||| |||| ||| ||||||||||||  |||||||  ||||||| ||||||||||||||| ||||    
T  7731747 ttgttttaaaatgaatgtcactttatattttcaaaacaactttaattttttttcttcaaacttta-cctcaataaatactccaact 7731663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 36296266 - 36296178
Alignment:
Q  215 ctttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttct--ctcacacaatttttaatgc 302  Q
    |||| |||||||||||||||||||||||||| || ||||||||  | |  |||| |||| |||||||||  ||||||||||||| |||||    
T  36296266 ctttccatttccaatacaactttaatttttt-ttccaactttattcccggtaaacactccaacttttctcgctcacacaattttcaatgc 36296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa 239  Q
    |||||| ||||| || |||||||||||||||||||| ||||||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 6e-34; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 19920419 - 19920318
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctcaataaatactcaaacttttctctcgcacaattttcaat 19920320  T
Q  301 gc 302  Q
    ||    
T  19920319 gc 19920318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 5723009 - 5723109
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatg 301  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5723009 aaaatgaatgtcactttacattttcaatacaactttaattttttctcctaactttaccctcaataaatactcaaacttttctctcacacaattttcaatg 5723108  T
Q  302 c 302  Q
    |    
T  5723109 c 5723109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 34002271 - 34002179
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  34002271 gtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgc 34002179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 1103483 - 1103590
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  1103483 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 1103582  T
Q  294 ttttaatg 301  Q
    ||| ||||    
T  1103583 tttcaatg 1103590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 40298846 - 40298953
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  40298846 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctctcacacaat 40298945  T
Q  294 ttttaatg 301  Q
    ||| ||||    
T  40298946 tttcaatg 40298953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 17869236 - 17869344
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  17869236 ttgtttcaaaatgaatgtcattttacatttccaatgcaactttaattttttccttccaactttatcctcaataaatactcaatcttttctctcacacaat 17869335  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  17869336 tttcaatgc 17869344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 42259702 - 42259595
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || || | ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  42259702 ttgttttaaaatgaatgttattttacgttttcaatacaactttaattttttcttccaactttaccctcaataaatactcaaacttttgtctcacataatt 42259603  T
Q  295 tttaatgc 302  Q
    || |||||    
T  42259602 ttcaatgc 42259595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 19906413 - 19906521
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || |||||||||||| ||||||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctcacaat 19906512  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  19906513 tttcaatgc 19906521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 41906088 - 41905981
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||| |||| |||| |||||||| ||||||||||||||| ||||||||||| |||||||    
T  41906088 ttgttttaaaataaatgtcactttacatttctaatacaactttaagttttctcttccaacttta-cctcaataaatactccaacttttctcttacacaat 41905990  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  41905989 tttcaatgc 41905981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 42044127 - 42044024
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttc--tctcacacaattttta 298  Q
    ||||| || |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||  |||||||||||||| |    
T  42044127 aaaattaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttca 42044028  T
Q  299 atgc 302  Q
    ||||    
T  42044027 atgc 42044024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 3681077 - 3680969
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||| ||||| |||||||||| | ||||||||| | ||||||||||||||| |||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctcacagaat 3680978  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  3680977 tttaaatgc 3680969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 26963478 - 26963575
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| |||||||| |||  |||||||||||||| ||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||| ||||    
T  26963478 ttgtttcaaaataaatgtctatttacatttccaatgcaactttaatttttttcttccaactttaccctcaatgaatactccaacttttctctctcaca 26963575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 30514972 - 30515076
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaac--ttttctctcacaca 291  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||  |||||||||| |||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttctctcagaca 30515071  T
Q  292 atttt 296  Q
    |||||    
T  30515072 atttt 30515076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 30833227 - 30833146
Alignment:
Q  216 tttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  30833227 tttacattttcaatacaacttttatttttttctttcaactttaccttcaataaatactccaacttttttctcacacaatttt 30833146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 32345990 - 32345893
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || ||| |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||    
T  32345990 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcaca 32345893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 31416906 - 31416796
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| ||  ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||  || |||  |||||||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaatttttctctctcacaca 31416807  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  31416806 attttcaatgc 31416796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 19288495 - 19288405
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    ||||| || ||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||| ||| |||||||||||| ||||    
T  19288495 aaaatgaatgtcactttacatttctaatacaactttaatttttttcttctaactttaccctcaataaattctccaacttttctctctcaca 19288405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 18733452 - 18733562
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa---ttttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||   |||||||||  |||| |||||||||||||||||| || |||| |||||||||    
T  18733452 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttttcttcgaactctaccctcaataaatactccaatttttttctcacaca 18733551  T
Q  292 atttttaatgc 302  Q
    | ||| |||||    
T  18733552 actttcaatgc 18733562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 36447225 - 36447115
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttc--tctcacaca 291  Q
    |||||| ||||| || |||| ||||||||| |||||||| |||||||||| |||| |||||||| ||||| ||||||||| ||||||||  |||||||||    
T  36447225 ttgtttcaaaatgaatgtcattttacattttcaatacaattttaatttttctcttccaactttatcctcattaaatactccaacttttctctctcacaca 36447126  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  36447125 attttcaatgc 36447115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 6521837 - 6521920
Alignment:
Q  215 ctttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaactt--ttctctcacacaatttt 296  Q
    |||||||||| |||| ||| || |||||||||||||||||||||| |||||||||||||||| ||   ||||||||||||||||    
T  6521837 ctttacattttcaatgcaatttaaattttttctttcaactttaccttcaataaatactcaaatttccctctctcacacaatttt 6521920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 39117622 - 39117534
Alignment:
Q  216 tttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttt-tctctcacacaatttttaatgc 302  Q
    ||||||||| |||||||||||||||| ||||||| |||| ||||||||||| ||||||| || ||| |||||||||||||||| |||||    
T  39117622 tttacattttcaatacaactttaattattttcttccaacattaccctcaatgaatactccaattttctctctcacacaattttcaatgc 39117534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 10684965 - 10684888
Alignment:
Q  215 ctttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||||||| |||| ||||||||||||||| ||| |||||||||||| |||||||| | ||||||||||||| ||||    
T  10684965 ctttacattttcaatgcaactttaatttttttcttccaactttacccttaataaatattaaaacttttctctctcaca 10684888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 33845544 - 33845456
Alignment:
Q  216 tttacatttccaatacaactttaatt--ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||| ||||| ||||||||||  ||||||  |||||||||||||||||| ||||| ||||||| |||| ||||||||| |||||    
T  33845544 tttacattttcaatagaactttaattatttttctcccaactttaccctcaataattactccaacttttttctcgcacaattttcaatgc 33845456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 43813499 - 43813430
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctca 263  Q
    |||||| ||||| || ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  43813499 ttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttcttccaactttaccctca 43813430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 22597229 - 22597297
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  22597229 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttaacctc 22597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 26527530 - 26527462
Alignment:
Q  216 tttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttct 283  Q
    ||||||||| ||||||||||||||||||||  ||| ||||||| ||||||||||||||| |||||||||    
T  26527530 tttacattttcaatacaactttaatttttttcttctaactttaacctcaataaatactccaacttttct 26527462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 33056432 - 33056362
Alignment:
Q  195 ttgtttaaaaataaacgtcactttaca---tttccaatacaactttaattttttctttcaactttaccctc 262  Q
    |||||| |||||||| |||| ||||||   |||||||||||||||||||||||||||||||||||| ||||    
T  33056432 ttgtttcaaaataaatgtcattttacaacatttccaatacaactttaattttttctttcaactttatcctc 33056362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 22627494 - 22627431
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt---ttttctttcaactttaccctc 262  Q
    ||||| || |||||||||||||||||||||||||||||||   ||||||| |||||||||||||    
T  22627494 aaaatgaatgtcactttacatttccaatacaactttaatttttttttcttccaactttaccctc 22627431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 32873318 - 32873241
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatact 272  Q
    |||||| ||||| || ||||||||| ||||||||||||| ||||||||||| ||||||| ||  ||| ||||||||||    
T  32873318 ttgttttaaaatgaatgtcactttatatttccaatacaattttaattttttttttcaaccttgtccttaataaatact 32873241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 36836058 - 36836154
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || ||| |||||||||| |||||||||||||| ||||||||| |||||||| ||||| |||| |||| || ||||||||| ||||    
T  36836058 ttgtttcaaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaacttta-cctcagtaaacactccaatttttctctctcaca 36836154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 48838772 - 48838731
Alignment:
Q  261 tcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  48838772 tcaataaatactcaaacttttctctcacacaattttcaatgc 48838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 28044286 - 28044218
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||| ||||||| |||||||| ||||    
T  28044286 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttatcctc 28044218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 32275203 - 32275271
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctc 262  Q
    |||||| ||||| || | ||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  32275203 ttgtttcaaaatgaatgccactttacatttctaatacaactttaatttttttcttccaactttaccctc 32275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 40805030 - 40805073
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  40805030 aaaataaatgtcactttacatttacaatacaactttaatttttt 40805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 42121549 - 42121599
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || ||||||||| |||||||||||||||||||||||||    
T  42121549 ttgtttcaaaatgaatgtcactttatatttccaatacaactttaatttttt 42121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 36447756 - 36447689
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccct 261  Q
    |||||| ||||| ||  |||||||| |||| |||||||||||||||| ||||||| ||||||||||||    
T  36447756 ttgttttaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccct 36447689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 18886668 - 18886718
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| ||  ||||||||||||| ||||||||||||||||||||    
T  18886668 ttgttttaaaatgaatctcactttacattttcaatacaactttaatttttt 18886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 11785240 - 11785155
Alignment:
Q  211 gtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  11785240 gtcactttacatttccaatacaactttaattttttcttccaactttaccctcaataaatattctaacttttctctcacacaatttt 11785155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 30627089 - 30627197
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| |||||||| ||||||||| |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  30627089 ttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttctctcaactttaccctcaataaatactcaaacttttctctcaaacaat 30627188  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  30627189 tttcaatgc 30627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 29915539 - 29915641
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  29915539 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 29915638  T
Q  293 ttt 295  Q
    |||    
T  29915639 ttt 29915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 31275796 - 31275687
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  31275796 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 31275697  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  31275696 ttttcaatgc 31275687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 4124009 - 4123901
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctcaataaatactccaacttttctttcacacaat 4123910  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  4123909 tttcaatgc 4123901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 12828835 - 12828727
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| ||  |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 12828736  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  12828735 tttcaatgc 12828727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 29927205 - 29927299
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctca 287  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||    
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctca 29927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 6140598 - 6140707
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctc--acacaa 292  Q
    |||||| ||||| || ||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||  ||||||    
T  6140598 ttgttttaaaatgaatgtcgctttacatttccaattcaactttaattttttcttccaactttaccttcaataaatacttaaacttttctctcttacacaa 6140697  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  6140698 ttttcaatgc 6140707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 8052343 - 8052450
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || ||||||||| ||||| |||||||||||||||||||||  ||| |||||||||||||||||||| |||| ||||||| |||||||    
T  8052343 ttgttttaaaatgaatgtcactttatatttctaatacaactttaattttttctcccaattttaccctcaataaatactccaactattctctcccacaatt 8052442  T
Q  295 tttaatgc 302  Q
    || |||||    
T  8052443 ttcaatgc 8052450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 17345290 - 17345180
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaat-tttttctttcaactttaccctcaataaatactcaaacttttc--tctcacaca 291  Q
    |||||| ||||| ||  |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||  |||||||||    
T  17345290 ttgttttaaaatgaatatcactttacatttctaatacaactttaatatttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 17345191  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  17345190 attttcaatgc 17345180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 4132129 - 4132042
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaactttt 281  Q
    |||||| ||||| || ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctcaataaatactccaactttt 4132042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 6143082 - 6143192
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaac--ttttctctcacaca 291  Q
    |||||| ||||| || |||| |||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||| ||||  |||||||| |||||    
T  6143082 ttgttttaaaatgaatgtcattttacatttccaattcaactttaatttttttcttccaactttaccttcaataaatacttaaacttttttctcttacaca 6143181  T
Q  292 atttttaatgc 302  Q
    |||||||||||    
T  6143182 atttttaatgc 6143192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 10494916 - 10494808
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||||||| ||||||||||||||| ||||||||||| |||  |||||||| || ||||||||||||| |||||    
T  10494916 ttgttttaaaatgaatgtcagtttacatttccaattcaactttaatttttttctttcaactttgcccaaaataaatagtccaacttttctctcatacaat 10494817  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  10494816 tttcaatgc 10494808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 26189527 - 26189603
Alignment:
Q  216 tttacatttccaatacaactttaat-tttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  26189527 tttacatttccaatgcaactttaatatttttcttccaactttaccctcaataaatactccaatttttctctcacaca 26189603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 34576542 - 34576652
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| ||  ||| |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||  ||||||  |||||||||||    
T  34576542 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttttcttccaactttatcctcaataaatacttcaacttttctctctcacaca 34576641  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  34576642 attttcaatgc 34576652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 26669245 - 26669144
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||| |||||||||||||||||||||||| || | |||||||| ||||||||||  ||| ||||||||||||||| |||||| |||    
T  26669245 aaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttcaat 26669146  T
Q  301 gc 302  Q
    ||    
T  26669145 gc 26669144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 30626867 - 30626956
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaat-aaatactcaaacttttct 283  Q
    |||||| ||||||||  | ||||||||||| |||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||    
T  30626867 ttgtttcaaaataaatattactttacattttcaatacaactttaattttttctctcaactttattctcaataaaatactcaaacttttct 30626956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 34439567 - 34439479
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttct 283  Q
    |||||| ||||| || |||| |||||||||||||||||||||| ||| |||||| |||||||||| |||||| |||||| |||||||||    
T  34439567 ttgtttcaaaatgaatgtcattttacatttccaatacaactttcattctttcttccaactttaccttcaatatatactccaacttttct 34439479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 32258720 - 32258830
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccct-caataaatactcaaac-ttttctctcacaca 291  Q
    |||||| ||||| || |||||||||||||| |||||||||||||| ||||||||| |||||||| |||  || |||||||| ||| ||||||||||||||    
T  32258720 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaacctaaaaaaaatactccaactttttctctcacaca 32258819  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  32258820 attttcaatgc 32258830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 25932646 - 25932736
Alignment:
Q  215 ctttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaac--ttttctctcacacaatttttaatg 301  Q
    |||||||||| |||| |||||||||||||||  |||  ||||||| |||||||||||||||||||  ||||||||||||||||||| ||||    
T  25932646 ctttacattttcaatgcaactttaattttttttcttctaactttatcctcaataaatactcaaacttttttctctcacacaattttcaatg 25932736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 296
Target Start/End: Original strand, 3015921 - 3016012
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    ||||| || |||||||||||||| |||||||||||||||||||  |||||| ||  |||||||||||||||| || |||||||||| ||||||||    
T  3015921 aaaatgaatgtcactttacattttcaatacaactttaattttt--tttcaatttggccctcaataaatactctaatttttctctca-acaatttt 3016012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 19689988 - 19689890
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || || |||||||||||| |||||||||||| | ||||||| ||||||||  || || |||||||| ||||||||||||||||||||    
T  19689988 ttgttttaaaatgaatgttactttacatttctaatacaacttta-tattttcttccaactttaatctaaaaaaatactccaacttttctctcacacaatt 19689890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 23936735 - 23936641
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcaca 289  Q
    ||||| ||||| || || ||||||||||| |||| ||||||| ||||||| ||| ||||||||||||||||| |||||| ||| |||||||||||    
T  23936735 tgtttcaaaatgaatgttactttacattttcaatgcaactttcatttttttcttccaactttaccctcaatatatactccaacctttctctcaca 23936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 1924818 - 1924751
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||| ||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  1924818 ttgttttaaaatgaatgtcattttacattttcaatacaactttaattttttttttcaacttcaccctc 1924751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 37225749 - 37225641
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  37225749 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattcttttcttccaactttaccctcaataaatacgctaacttttctctcacacaat 37225650  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  37225649 tttcaatgc 37225641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 83295 - 83402
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaattttttcttccaactttaccctcattaaatactctaacttttctctcacgcaatt 83394  T
Q  295 tttaatgc 302  Q
    || |||||    
T  83395 ttcaatgc 83402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 46363165 - 46363063
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 46363066  T
Q  293 ttt 295  Q
    |||    
T  46363065 ttt 46363063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 2988763 - 2988672
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    |||||| ||||| || ||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaatacaatttaatttttttcttccaactttaccctcaataaatactcaaacttttctctc 2988672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 22730940 - 22731031
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatg 301  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  22730940 gtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactcaaacttttctctcacacaaatttcaatg 22731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 35099511 - 35099412
Alignment:
Q  204 aataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  35099511 aataaatgtcattttacatttccaatacaactttaatttttttctcccaactttacccttaataaatactcaaacttttctctcgcacaattttcaatgc 35099412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 50420258 - 50420365
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    ||||||||||||||| |||| |||||||||  |||||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||| | |||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaactttaattttttcttccaactttactttcaataaatactctaacttttctctcgcgcaatt 50420357  T
Q  295 tttaatgc 302  Q
    || |||||    
T  50420358 ttcaatgc 50420365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 54933359 - 54933249
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttc--tctcacaca 291  Q
    |||||| ||||| || ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||  |||||||||    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 54933260  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  54933259 attttcaatgc 54933249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 32304043 - 32303955
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctc--acacaatttt 296  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  32304043 gtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcttacacaatttt 32303955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 43600337 - 43600245
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaattt 295  Q
    |||||||| || ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  43600337 aaaataaatgttactttacattttcaatacaattttaattttttcttccaactttaccctcaataaatactc-tacttttctctcacacaattt 43600245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 43688033 - 43687928
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt----ttttctttcaactttaccctcaataaatactcaaacttt--tctctcacacaattt 295  Q
    |||||||| |||||||||||||||||||||||||||||||    ||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||    
T  43688033 aaaataaatgtcactttacatttccaatacaactttaattttttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattt 43687934  T
Q  296 ttaatg 301  Q
    | ||||    
T  43687933 tcaatg 43687928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 44854314 - 44854406
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctca 287  Q
    |||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||| ||| |||||||||||||||||||| |||||||||||||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaattttaactttttcttccaattttaccctcaataaatactccaacttttctctca 44854406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 38457480 - 38457567
Alignment:
Q  216 tttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||| |||||||||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  38457480 tttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgc 38457567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 43580474 - 43580584
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa--ttttttctttcaactttaccctcaataaatactcaaac-ttttctctcacaca 291  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||  ||||||||| |||||||||||| ||||||||||| ||| |||| |||||||||    
T  43580474 ttgtttcaaaataaatgtcactttacattttcaatacaactttaattttttttcttccaactttacccttaataaatactccaactttttttctcacaca 43580573  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  43580574 attttcaatgc 43580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 3000751 - 3000860
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc--aactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || || ||||||||||| |||||||||||||||||||| | ||  |||| |||||||||||||||||| ||||||||||||||||||    
T  3000751 ttgttttaaaatgaatgttactttacattttcaatacaactttaattttttttctcccaactctaccctcaataaatactccaacttttctctcacacaa 3000850  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  3000851 ttttcaatgc 3000860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 43169333 - 43169437
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||||||||  |||||||||||    
T  43169333 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttctaactttaccttcaataaatactcaaacttttatctctcacaca 43169432  T
Q  292 atttt 296  Q
    |||||    
T  43169433 atttt 43169437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 54261414 - 54261518
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctc--tcacaca 291  Q
    |||||| ||||| |||||| |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||  |||||||    
T  54261414 ttgtttcaaaatgaacgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctctcacaca 54261513  T
Q  292 atttt 296  Q
    |||||    
T  54261514 atttt 54261518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 27027732 - 27027840
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaa-ctttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||||||||||| |||||||||||  ||||| ||||| ||| ||||||||||| |||||||||||||||||||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatactccaacttttctctcacacaat 27027831  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  27027832 tttcaatgc 27027840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 41287091 - 41287185
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt---ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||||||||||||||||||||||||||||||||||   ||| ||||||| ||||||||||||||||||||  || |||||||||||||| |||||    
T  41287091 gtcactttacatttccaatacaactttaatttttttttcttccaacttttccctcaataaatactcaaaccattttctcacacaattttcaatgc 41287185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 647725 - 647638
Alignment:
Q  216 tttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| ||| |||||| |||||    
T  647725 tttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctcttacagaattttcaatgc 647638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 15514872 - 15514771
Alignment:
Q  203 aaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||  |||||||||| |||||| |||||| |||||||||||| || |||||| |||    
T  15514872 aaataaatgtcactttacatttccaatacaactttaattttttttctcccaactttaccttcaatagatactccaacttttctctcgcataattttcaat 15514773  T
Q  301 gc 302  Q
    ||    
T  15514772 gc 15514771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 36310404 - 36310295
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaacttta-attttttctttcaactttaccctcaat-aaatactcaaacttttctctcacacaa 292  Q
    |||||| |||||||| |||| |||||||||||||||||||||||  ||||||||  |||||||||| ||||| ||||||||||| ||||||||| |||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaactttattttttttctcccaactttaccttcaataaaatactcaaatttttctctcgcacaa 36310305  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  36310304 ttttcaatgc 36310295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 25722608 - 25722505
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttca-actttaccctcaataaatactcaaacttt--tctctcacacaattttta 298  Q
    ||||| || |||||||||||||| ||||||||||||||||||||  |||| |||||||||| ||||||||||| ||||||  |||||||||||||||| |    
T  25722608 aaaatgaatgtcactttacattttcaatacaactttaatttttttcttcatactttaccctaaataaatactccaacttttctctctcacacaattttca 25722509  T
Q  299 atgc 302  Q
    ||||    
T  25722508 atgc 25722505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 53560664 - 53560760
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| |||||||| |||  ||||||||| |||| |||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||| ||||    
T  53560664 ttgtttcaaaataaatgtcgttttacatttacaatgcaactttaattttttcttccaactttatcctcgataaaaactcaaacttttctctctcaca 53560760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 51381720 - 51381813
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa--ttttttctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||||| |||||||||| || |||||||||    
T  51381720 ttgtttcaaaataaatgtcactttacatttacaatacaactttaattttttttcttctaactttaccctcgataaatactccaatttttctctc 51381813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 44645344 - 44645429
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    ||||| || ||| |||||||||||| || ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  44645344 aaaatgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctc 44645429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 4391903 - 4392011
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| ||  |||||||||||||  | ||||| ||||||||||| ||  |||||||||||||||||||||||| |||||||||||| ||||||    
T  4391903 ttgttttaaaatgaatatcactttacatttttagtacaattttaatttttttctcccaactttaccctcaataaatactccaacttttctctcgcacaat 4392002  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  4392003 tttcaatgc 4392011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 5244585 - 5244692
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || ||||| ||||||||  |||| ||||||||||||||  | |||||||||||||||||||||||| || ||||||||||||  |||    
T  5244585 ttgttttaaaatgaatgtcaccttacatttttaatataactttaatttttttatccaactttaccctcaataaatactctaatttttctctcacattatt 5244684  T
Q  295 tttaatgc 302  Q
    || |||||    
T  5244685 ttcaatgc 5244692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 20512651 - 20512553
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa--ttttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || ||| |||||||||| |||| |||||||||  ||||||||| |||||||||| ||||||||||||| |||||||||||| ||||    
T  20512651 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaaatttttttcttccaactttaccttcaataaatactccaacttttctctctcaca 20512553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 36541511 - 36541594
Alignment:
Q  216 tttacatttccaatacaactttaattt-tttctttcaactttaccctcaataaatactcaaacttttctc--tcacacaatttt 296  Q
    ||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  36541511 tttacattttcaatacaactttactttatttcttccaactttaccctcaataaatattccaacttttctctctcacacaatttt 36541594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 27483337 - 27483270
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctc 27483270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 19552539 - 19552607
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaacttt-aattttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  19552539 ttgttttaaaatgaatgtcactttacattttcaatacaactttaaattttttcttccaactttaccctc 19552607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 22414761 - 22414861
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaa 299  Q
    ||||| || ||||||||||||||  |||| ||||||||||||||  ||| |||||||||| ||||||||||||||| |  |||||| |||||||||| ||    
T  22414761 aaaatgaatgtcactttacatttttaatataactttaattttttttcttccaactttaccttcaataaatactcaacc--ttctcttacacaattttcaa 22414858  T
Q  300 tgc 302  Q
    |||    
T  22414859 tgc 22414861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 26965653 - 26965585
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  26965653 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 26965585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 34059875 - 34059943
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  34059875 ttgttttaaaatgaatgtcattttacattttcaatacaactttaatttttttctttcaactttaccctc 34059943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 36771721 - 36771653
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  36771721 ttgttttaaaatgaatgtcactttacatttacaatacaactttaattttttactttcaactttatcctc 36771653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 27039347 - 27039434
Alignment:
Q  216 tttacatttccaatacaactttaattttttcttt-caactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||| || ||||| ||||||||||| ||| ||||||||  || ||||||||||| |||||| ||||||||||||||| |||||    
T  27039347 tttacattttcattacaaatttaatttttttttttcaactttattcttaataaatactccaactttcctctcacacaattttcaatgc 27039434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 42857197 - 42857114
Alignment:
Q  211 gtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||||||||||||| ||||||| |||| |||||||||  ||||||||| || |||||||||| ||||||| || ||||||||    
T  42857197 gtcactttacatttcccatacaacattaatttttttcttctaactttaccttcgataaatactccaacttttttcgcacacaat 42857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 44648555 - 44648492
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttac 258  Q
    |||||| ||||| || |||||||||||||||||||||||||||| |||||| || |||||||||    
T  44648555 ttgttttaaaatgaatgtcactttacatttccaatacaactttattttttttttccaactttac 44648492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 49470788 - 49470898
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctc--acaca 291  Q
    |||||| ||||| || |||  ||||||||| |||||||||||||| ||||||| | ||| |||| || |||||||||||| ||||||||||||  |||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaatttttttcatccaaatttagccacaataaatactccaacttttctctcttacaca 49470887  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  49470888 attttcaatgc 49470898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 790095 - 790145
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  790095 ttgtttcaaaattaatgtcactttacatttccaatacaactttaatttttt 790145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 35239392 - 35239446
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaacttt 256  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||| |||||||    
T  35239392 aaaatgaatgtcactttacatttctaatacaactttaattttttcttccaacttt 35239446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 52222874 - 52222820
Alignment:
Q  220 catttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactc 273  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  52222874 catttccaatacaactttaatttttttcttccaactttaccctcagtaaatactc 52222820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 42007194 - 42007129
Alignment:
Q  216 tttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaactttt 281  Q
    ||||||||| |||||||| ||||| ||||| ||| ||||||| ||| |||||||||||||||||||    
T  42007194 tttacattttcaatacaattttaaatttttttttaaactttatccttaataaatactcaaactttt 42007129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 45095559 - 45095618
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctc 262  Q
    ||||| || |||||||||||||| |||||||||||||||||||| || |||||||||||||    
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaatttttt-ttccaactttaccctc 45095618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 2568157 - 2568090
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccct 261  Q
    |||||| ||||| || || ||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaatttttttcttccaactttaccct 2568090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 13485959 - 13485909
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||| ||||||||||||||||||||||||||||||    
T  13485959 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttt 13485909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 25061703 - 25061753
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || | |||||||||||||||||||||||||||||||||    
T  25061703 ttgttttaaaatgaatgccactttacatttccaatacaactttaatttttt 25061753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 31291101 - 31291055
Alignment:
Q  212 tcactttacatttccaatacaactttaatt-ttttctttcaacttta 257  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  31291101 tcactttacatttctaatacaactttaatttttttctttcaacttta 31291055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 38165780 - 38165746
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt 245  Q
    |||||||||||||||||||||||||||||||||||    
T  38165780 gtcactttacatttccaatacaactttaatttttt 38165746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 1341067 - 1341006
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    ||||| || |||||||||||||| |||||||||||||||| ||||||| |||| ||||||||    
T  1341067 aaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacgttaccctc 1341006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 53716029 - 53716078
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    ||||| ||||| || || ||||||||||||||||||||||||||||||||    
T  53716029 tgttttaaaatgaatgttactttacatttccaatacaactttaatttttt 53716078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 28116247 - 28116337
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||    
T  28116247 aaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatactcaaacttttctctcacaca 28116337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 19849079 - 19849187
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| ||  |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19849079 ttgttttaaaatgaatttcactttacaattccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcacacaat 19849178  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  19849179 tttcaatgc 19849187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 45520607 - 45520507
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatg 301  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||| |||||||| |||  |||||||||||||||||||||||| |||||||||||||    
T  45520607 aaaatgaatgtcactttacattttcaatacaactttaattttttcttccaactttatccttgataaatactcaaacttttctctcatacaatttttaatg 45520508  T
Q  302 c 302  Q
    |    
T  45520507 c 45520507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 6510113 - 6510220
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| |||||||| ||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||| |||||||    
T  6510113 ttgtttcaaaataaatgtcactttatattttcaatacaactttaacttttttctctcaactttaccctcaataaatactccaccttttctcttacacaat 6510212  T
Q  294 ttttaatg 301  Q
    ||||||||    
T  6510213 ttttaatg 6510220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 17317984 - 17317891
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  17317984 gtcacattacatttccaatacaactttaattttttttctttcaactttaccttcaataaatactcaaacttttatctcacacaattttcaatgc 17317891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 30022063 - 30022171
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || || |||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||    
T  30022063 ttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 30022162  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  30022163 tttcaatgc 30022171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 24259606 - 24259716
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| || ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 24259705  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  24259706 attttcaatgc 24259716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 31987306 - 31987407
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| || |||||| |||    
T  31987306 aaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcgcataattttcaat 31987405  T
Q  301 gc 302  Q
    ||    
T  31987406 gc 31987407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 29840070 - 29840169
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa--ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || |||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||||||| |||||    
T  29840070 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttctcccaactttaccctcaataaatactccaacttttctctcgcacaa 29840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 19282567 - 19282469
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||| |||||||||||| ||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccttcaataaatactctaacttttctctctcaca 19282469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 44855245 - 44855347
Alignment:
Q  203 aaataaacgtcactttacatttccaatacaactttaattttt-tctttcaa--ctttaccctcaataaatactcaaacttttctctcacacaatttttaa 299  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||  |||||||||||||||||| || |||||||||||||||||||||| ||    
T  44855245 aaataaatgtcactttacatttccaatacaactttaagttttctcttccaattctttaccctcaataaataatccaacttttctctcacacaattttcaa 44855344  T
Q  300 tgc 302  Q
    |||    
T  44855345 tgc 44855347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 22212336 - 22212438
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||| ||| |||||||||||    
T  22212336 ttgttttaaaatgaatgtcaccttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctcacacaat 22212435  T
Q  294 ttt 296  Q
    |||    
T  22212436 ttt 22212438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 31941553 - 31941650
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaactattctctctcaca 31941650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 34096026 - 34096118
Alignment:
Q  211 gtcactttacatttccaatacaactttaattttttcttt--caactttaccctcaataaatactcaaacttttctctcacacaatttttaatg 301  Q
    |||| |||||||||| ||||||| ||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  34096026 gtcaatttacatttctaatacaattttaattttttttttttcaactttaccctcaataaatattcaaacttttctctcacacaattttcaatg 34096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 34124290 - 34124394
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctc--tcacaca 291  Q
    |||||| ||||| || ||| |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||    
T  34124290 ttgttttaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcacaca 34124389  T
Q  292 atttt 296  Q
    |||||    
T  34124390 atttt 34124394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 47321139 - 47321250
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttct--ctcacac 290  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||  ||| |||    
T  47321139 ttgttttaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaacttttctcactcgcac 47321238  T
Q  291 aatttttaatgc 302  Q
    |||||| |||||    
T  47321239 aattttcaatgc 47321250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 17499874 - 17499782
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    |||||| ||||| || ||| ||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  17499874 ttgtttcaaaatgaatgtcgctttacatttccaatgcaattttaatttttttcttccaactttaccctcaataaatactcaaacttttctctc 17499782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 37445655 - 37445763
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| ||||| |||    
T  37445655 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttcacataat 37445754  T
Q  294 ttttaatgc 302  Q
    |||||||||    
T  37445755 ttttaatgc 37445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 30492739 - 30492826
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaattttt 297  Q
    |||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||  ||||||||||    
T  30492739 gtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctcttgcacaattttt 30492826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 38761964 - 38761886
Alignment:
Q  211 gtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcaca 289  Q
    |||||||||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||||    
T  38761964 gtcactttacattttcaattcaactttaatttattttttcaactttaacctcaataaatactccaacttttctctcaca 38761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 35928486 - 35928581
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcaca 289  Q
    |||||| ||||||||  ||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||  ||| ||||| |||||    
T  35928486 ttgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactgcaacgtttctttcaca 35928581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 51434414 - 51434304
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| || ||| ||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||  ||||||  |||||||||||    
T  51434414 ttgttttaaaatgaatgtcgctttacatttctaatgcaactttaattttttccttcaaactttaccctcaataaatactttaacttttctctctcacaca 51434315  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  51434314 attttcaatgc 51434304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 54091953 - 54092055
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||| ||||  ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| || |||    
T  54091953 ttgttttaaaatgaatgtcaatttagatttttaatacaactttaatttttttctctcaactttaccctcaataaatactccaacttttctctcgcataat 54092052  T
Q  294 ttt 296  Q
    |||    
T  54092053 ttt 54092055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 45889580 - 45889668
Alignment:
Q  217 ttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttt--tctctcacacaatttttaatgc 302  Q
    |||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||  |||||||||||||||| |||||    
T  45889580 ttacattttcaatacaactttaacttttttcttcctactttaccctcaataaatactccaacttttctctctcacacaattttcaatgc 45889668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 6462004 - 6462094
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttac---cctcaataaatactcaaactttt 281  Q
    |||||| ||||| || ||| ||||||||||||||||||||||||| ||||||||| |||||||||   |||||||||||||||||||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcctcaataaatactcaaactttt 6462094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 11835109 - 11835208
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||  |||| |||||||||||| ||||||||| |||||| ||||||||||||||| |  ||||||||||||||||| |||    
T  11835109 aaaatgaatgtcactttacatttttaatataactttaatttttttctttcaaatttaccttcaataaatactcaacc--ttctctcacacaattttcaat 11835206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 29290040 - 29289940
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaa-ctttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||| |||| ||||||||||| ||||||||  ||||| ||||||| ||||||||||||  |||||||||||||||||||||| |||    
T  29290040 aaaattaatgtcactttatattttcaatacaacttcaatttttttcttcaaactttacc-tcaataaatacttcaacttttctctcacacaattttcaat 29289942  T
Q  301 gc 302  Q
    ||    
T  29289941 gc 29289940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 44835346 - 44835432
Alignment:
Q  212 tcactttacatttccaatacaactttaattttttctttc--aactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||||||||||| |||||||||||||||||||  |||  ||||||||||||||||| || || |||| |||||||||| ||||||    
T  44835346 tcactttacatttcgaatacaactttaatttttttcttccaaactttaccctcaataactagtccaactcttctctcacataatttt 44835432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 42672404 - 42672486
Alignment:
Q  214 actttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||| |||| |||| || ||||||||||||||  |||||||||||||||||||||||  ||||| ||||| ||||||||||    
T  42672404 actttatattttcaatgcacctttaattttttctcccaactttaccctcaataaatacttcaacttctctcttacacaatttt 42672486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 52732594 - 52732663
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa--ttttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  52732594 ttgttttaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctc 52732663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 4408335 - 4408224
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttt--tctttcaactttaccctcaataaatactcaaacttttc--tctcacac 290  Q
    |||||| ||||| || ||| |||||||||  |||| ||||||||||||||  |||| | |||||| ||||||||||| ||||||||||||  ||||||||    
T  4408335 ttgtttcaaaatgaatgtcgctttacattctcaatgcaactttaatttttcttcttccgactttaacctcaataaatgctcaaacttttctctctcacac 4408236  T
Q  291 aatttttaatgc 302  Q
    |||||| |||||    
T  4408235 aattttcaatgc 4408224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 39671238 - 39671177
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaacttt 256  Q
    |||||| ||||| || |||  |||||||||||||||||||||||||||||||||||||||||    
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaattttttctttcaacttt 39671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 43421272 - 43421204
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    |||||| ||||| || |||||||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  43421272 ttgtttcaaaatgaaggtcactttacatttcccatacaactttaatttttttcttccaactttaccctc 43421204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 55548380 - 55548305
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaata 270  Q
    |||||| |||||||  |||||||||||||| |||| |||||||||||| || || ||||||| |||||||||||||    
T  55548380 ttgtttcaaaataagtgtcactttacattttcaatgcaactttaatttctttttccaactttgccctcaataaata 55548305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 15501302 - 15501252
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaatttttt 15501252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 56556410 - 56556360
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 56556360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 45903555 - 45903454
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || |||||||||||||| |||||||||||||||| ||||||  |||||| | |||||| || |||||  ||||||||||||  ||||||| |||    
T  45903555 aaaatgaatgtcactttacattttcaatacaactttaatttttttctaccaacttaaacctcaaaaagtactctgacttttctctcatccaattttcaat 45903456  T
Q  301 gc 302  Q
    ||    
T  45903455 gc 45903454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 6232191 - 6232116
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc--aactttaccctcaataaa 268  Q
    |||||| |||||||| |||| ||||||||| |||||||||||||||||||| | ||  ||||||| ||||||||||    
T  6232191 ttgtttcaaaataaatgtcaatttacattttcaatacaactttaattttttttctcctaactttagcctcaataaa 6232116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 55126494 - 55126596
Alignment:
Q  197 gtttaaaaataaacgtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctc--acacaat 293  Q
    |||| ||||| || |||| |||| |||| ||||||||||||||||||| ||||  |||| |||||| || |||||||| ||||||||||||  |||||||    
T  55126494 gttttaaaatgaatgtcattttaaattttcaatacaactttaatttttctcttctaactctaccctaaaaaaatactctaacttttctctcctacacaat 55126593  T
Q  294 ttt 296  Q
    |||    
T  55126594 ttt 55126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 21045151 - 21045201
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||||||||    
T  21045151 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 21045201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 32141119 - 32141069
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || | |||||||||||||||||||||||||||||||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaatttttt 32141069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 50072276 - 50072326
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||||||||    
T  50072276 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 50072326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 54233861 - 54233900
Alignment:
Q  215 ctttacatttccaatacaactttaattttttctttcaact 254  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  54233861 ctttacattttcaatacaactttaattttttcttccaact 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 32141280 - 32141211
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaactttaccctc 262  Q
    |||||| ||||| |||||||||| | ||||  |||||||||||||||  ||||||| |||||||||||||    
T  32141280 ttgtttcaaaatgaacgtcacttcatattttgaatacaactttaattttttttcttccaactttaccctc 32141211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 51930595 - 51930645
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || ||| ||||||||||||||||||| |||||||||||    
T  51930595 ttgtttcaaaatgaatgtcgctttacatttccaatacaattttaatttttt 51930645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 31817331 - 31817271
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaacttt 256  Q
    |||||| ||||| || ||||||||||||||||||| |||||||  ||||||||| |||||||    
T  31817331 ttgtttcaaaatgaatgtcactttacatttccaatgcaacttt-tttttttcttccaacttt 31817271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 45049711 - 45049812
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||  |||| || ||||| ||||||||   |||||||| |||||||| |||||  |||||||| || ||||||||| |||    
T  45049711 aaaattaatgtcactttacatttttaatataattttaatttttttctccgaactttactctcaataagtactcctacttttctttcgcacaattttcaat 45049810  T
Q  301 gc 302  Q
    ||    
T  45049811 gc 45049812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 36805579 - 36805531
Alignment:
Q  216 tttacatttccaatacaactttaatt-ttttctttcaactttaccctca 263  Q
    ||||||||| |||||||||||||||| ||||||| |||||||| |||||    
T  36805579 tttacatttgcaatacaactttaatttttttcttccaactttaacctca 36805531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 7743401 - 7743507
Alignment:
Q  197 gtttaaaaataaacgtcactttacatttccaatacaactttaat-tttttctttcaactttaccctcaataaatactcaaacttttctctcacacaattt 295  Q
    |||| ||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaatctttttcttccaactttaccctcaataaatagtccaacttttctctcacacaattt 7743500  T
Q  296 ttaatgc 302  Q
    | |||||    
T  7743501 tcaatgc 7743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 4840874 - 4840773
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  4840874 aaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctcccacacagttttcaat 4840775  T
Q  301 gc 302  Q
    ||    
T  4840774 gc 4840773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 43388811 - 43388709
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||| |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||    
T  43388811 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcacataat 43388712  T
Q  294 ttt 296  Q
    |||    
T  43388711 ttt 43388709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 2459771 - 2459881
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttt--tctctcacaca 291  Q
    |||||| ||||| || ||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  2459771 ttgttttaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 2459870  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  2459871 attttcaatgc 2459881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 25332569 - 25332660
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    |||||| ||||| |||||| | ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  25332569 ttgtttcaaaatgaacgtcgccttacatttccaatgcaactttaattttttcttccaactttatcctcaataaatactccaacttttctctc 25332660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 33093366 - 33093476
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttct--ctcacaca 291  Q
    |||||| ||||| || |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||  ||||||||    
T  33093366 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatattccaacttttctccctcacaca 33093465  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  33093466 attttcaatgc 33093476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 10581012 - 10580915
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| ||  |||||||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  10581012 ttgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcaca 10580915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 18374918 - 18374831
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaactttt 281  Q
    |||||| ||||| || |||||||||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  18374918 ttgtttgaaaatgaatgtcactttacatttccaatataattttaatttttttcttccaactttaccctcaataaatactcaaactttt 18374831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 41984382 - 41984513
Alignment:
Q  161 tgttttaaaattagtgtcgatttagtnnnnnnnnttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttacc 259  Q
    ||||||||||| ||||||| ||||||        |||||| ||||||||  || |||||||||| |||||||||||||||||||| ||| ||||||||||    
T  41984382 tgttttaaaatgagtgtcgctttagtaaaaacaattgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacc 41984481  T
Q  260 ctcaataaatactcaaacttttctctcacaca 291  Q
     | ||||||||||| |||||||||||||||||    
T  41984482 tttaataaatactccaacttttctctcacaca 41984513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 776039 - 775930
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaactttt--ctctcacacaa 292  Q
    |||||| ||||| || ||| |||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||  ||| |||||||    
T  776039 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaattttttcttctaactttaccctcaataaatactctaacttttccctcccacacaa 775940  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  775939 ttttcaatgc 775930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 4536572 - 4536677
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||| |||||   |||||||||||    
T  4536572 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttctcccaactttaccctcaacaaatactctaactt---tctcacacaat 4536668  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  4536669 tttcaatgc 4536677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 36360510 - 36360432
Alignment:
Q  212 tcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcaca 289  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  36360510 tcactttgcattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctcacaca 36360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 37106886 - 37106968
Alignment:
Q  221 atttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||| |||||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  37106886 attttcaatacaactttaatttttttcttccaactttacccttaataaatactccaacttttctctcacacaattttcaatgc 37106968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 1360175 - 1360283
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||| |||||||||||||||||||| ||||||||  ||| |||||||||||||||||||  ||||||||||| | |||||    
T  1360175 ttgtttcaaaatgaatgtcactttgcatttccaatacaactttaatttttttctcccaattttaccctcaataaatacttcaacttttctcttaaacaat 1360274  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  1360275 tttcaatgc 1360283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 24775203 - 24775289
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||||||||||| |||||||| ||||||||||| ||  ||| |||||||||||||||||||  ||||||||||||||||||||||    
T  24775203 gtcactttacattttcaatacaattttaatttttttctcccaagtttaccctcaataaatacttcaacttttctctcacacaatttt 24775289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 1298927 - 1298826
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||||||||| |||||||||||||||||| || |  ||||||| ||||||||||| ||| ||||||||||||||| |||||| |||    
T  1298927 aaaatgaatgtcactttacatttctaatacaactttaatttttctcatcgaactttatcctcaataaattctccaacttttctctcacataattttcaat 1298828  T
Q  301 gc 302  Q
    ||    
T  1298827 gc 1298826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 43460792 - 43460873
Alignment:
Q  216 tttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||  ||||||||||||||| ||||||    
T  43460792 tttacatttccaatacaactttaagttttctcttccaacgttaccctcaataaatacttcaacttttctctcacataatttt 43460873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 16316723 - 16316815
Alignment:
Q  211 gtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||| |||||  |||||||||| || ||||||| |||||||||||||| |||||    
T  16316723 gtcactttatatttccaatacaactttaatttttttcttccaaatttactttcaataaatattccaacttttatctcacacaattttcaatgc 16316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 296
Target Start/End: Complemental strand, 39866820 - 39866723
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaa--cttttctctcacacaatttt 296  Q
    ||||| || ||| ||||||||||||||| ||| ||||||||||| ||| |||||||||| ||||||||||||||||   |||||||||||||||||||    
T  39866820 aaaatgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttaccttcaataaatactcaaatttttttctctcacacaatttt 39866723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 43344375 - 43344275
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || ||||| ||| |||| ||||||||||||||||||| ||| |||||||||| | ||||||||||| || |||||||||||| ||||    
T  43344375 ttgtttcaaaatgaatgtcaccttatattttcaatacaactttaattttt-cttccaactttacctttaataaatactctaatttttctctcacataatt 43344277  T
Q  295 tt 296  Q
    ||    
T  43344276 tt 43344275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 29795344 - 29795276
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  29795344 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctc 29795276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 4566270 - 4566167
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttt--tctctcacacaattttta 298  Q
    |||||| | ||||||||||||||  ||||||||||||||| |||| ||||||||||| | |||||||| | || ||||||  |||||||||||||||| |    
T  4566270 aaaatatatgtcactttacatttttaatacaactttaatttttttttttcaactttatcatcaataaagagtccaacttttctctctcacacaattttca 4566171  T
Q  299 atgc 302  Q
    ||||    
T  4566170 atgc 4566167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 301
Target Start/End: Original strand, 14511459 - 14511565
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaa-ctttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    ||||| ||||| || ||| ||||||||||  |||||||| ||||||||||| | ||| ||||| ||||||||||||||| ||||||||| |  |||||||    
T  14511459 tgtttcaaaatgaatgtctctttacattttgaatacaacattaattttttcctccaaactttatcctcaataaatactctaacttttcttttgcacaatt 14511558  T
Q  295 tttaatg 301  Q
    || ||||    
T  14511559 ttcaatg 14511565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 6591963 - 6592072
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa--ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| ||  ||| ||||||||||||||||||||||||  ||||||||  ||||||| |  ||||| ||||||| |||||||||||  || ||    
T  6591963 ttgttttaaaatgaatatcattttacatttccaatacaactttaattttttttctcccaactttcctttcaatgaatactccaacttttctcttgcataa 6592062  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  6592063 ttttcaatgc 6592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 34225771 - 34225821
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||||||||    
T  34225771 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 34225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 40987418 - 40987357
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    ||||| || ||| |||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  40987418 aaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctc 40987357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 45148106 - 45148053
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctt 248  Q
    |||||| ||||| || |||||||||||||| ||||| |||||||||||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaattttttctt 45148053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 14378371 - 14378328
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    ||||| || |||||||||||||| ||||||||||||||||||||    
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaatttttt 14378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 1381748 - 1381813
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaacttt-aattttttctttcaactttacc 259  Q
    |||||| ||||| || || ||||||||||||||||| |||||| | ||||||||| ||||||||||    
T  1381748 ttgttttaaaatgaatgttactttacatttccaatataactttgatttttttcttccaactttacc 1381813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 4766341 - 4766292
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    ||||| ||||| || |||| ||||||||| ||||||||||||||||||||    
T  4766341 tgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttt 4766292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 40410473 - 40410518
Alignment:
Q  218 tacatttccaatacaactttaa-ttttttctttcaactttaccctc 262  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||    
T  40410473 tacatttccaatacaactttaatttttttctcccaactttaccctc 40410518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 27109975 - 27109874
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27109975 ttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctcacacaat 27109876  T
Q  294 tt 295  Q
    ||    
T  27109875 tt 27109874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 9022393 - 9022501
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  9022393 ttgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 9022492  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  9022493 tttcaatgc 9022501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 22601134 - 22601241
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| ||| ||||||||||| ||||    
T  22601134 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattgtttcttccaactttaccctcgataaatactccaacctttctctcacagaatt 22601233  T
Q  295 tttaatgc 302  Q
    || |||||    
T  22601234 ttcaatgc 22601241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 8382625 - 8382524
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || |||||||||||||| |||||||||||||||||||| || |||||||||||||||||| |||||| |||||||||||||||||||||| |||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctcaatatatactccaacttttctctcacacaattttcaat 8382526  T
Q  301 gc 302  Q
    ||    
T  8382525 gc 8382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 42946120 - 42946228
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||  ||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  42946120 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttctttcaattttaccctcaataaatactctaatttttctctcacacaat 42946219  T
Q  294 ttttaatgc 302  Q
    |||||||||    
T  42946220 ttttaatgc 42946228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 5588612 - 5588521
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatg 301  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  5588612 gtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactcaaacttttctctcacacaaatttcaatg 5588521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 32326873 - 32326771
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaa 299  Q
    |||||||| |||||||||||||| ||||||||||||||||||||  ||||||| ||||||| |||||||||||| ||||||| |||||||||||||| ||    
T  32326873 aaaataaatgtcactttacattttcaatacaactttaatttttttcctttcaattttacccacaataaatactccaacttttttctcacacaattttcaa 32326774  T
Q  300 tgc 302  Q
    |||    
T  32326773 tgc 32326771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 7612496 - 7612604
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||| ||||||||| |||| |||| |||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  7612496 ttgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttccaactttaccctaaataaatactccaacttttctctcacacaat 7612595  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  7612596 tttcaatgc 7612604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 34461737 - 34461628
Alignment:
Q  197 gtttaaaaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaactttaccctcaataaatactcaaacttttc--tctcacacaa 292  Q
    |||| ||||| || |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||| ||||||||  ||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaaaactccaacttttctgtctcacacaa 34461638  T
Q  293 tttttaatgc 302  Q
    |||| |||||    
T  34461637 ttttcaatgc 34461628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 14541900 - 14541792
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||||||||| ||||||||||||||||||| ||| |||||||| ||| ||||||||||  |||||||||||| ||||||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaacttttctctctcacaat 14541801  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  14541800 tttcaatgc 14541792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 296
Target Start/End: Original strand, 32661309 - 32661405
Alignment:
Q  201 aaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    |||||| || || ||| ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32661309 aaaaatgaatgttactctacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactctaacttttctctcacacaatttt 32661405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 11257540 - 11257646
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || ||||||||||||||  |||||||||||||||||| ||| ||||||||  |||||||||||||  ||||||||||||||||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaattttt-cttccaactttaatctcaataaatacttcaacttttctctcacacaatt 11257638  T
Q  295 tttaatgc 302  Q
    || |||||    
T  11257639 ttcaatgc 11257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 296
Target Start/End: Original strand, 30788934 - 30789035
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    ||||| |||||||| |||||||||||| | |||||||||||||| |||||||||  ||||||||||| | ||||||||| ||||||||||||||| ||||    
T  30788934 tgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatactccaacttttctctcacataatt 30789033  T
Q  295 tt 296  Q
    ||    
T  30789034 tt 30789035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 35052469 - 35052566
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || |||  |||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| ||||||||| ||||    
T  35052469 ttgttttaaaatgaatgtcgttttacatttccaatacaactttaatttttttctttcaactttcccttcaataaatactcaaaattttctctctcaca 35052566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 39970323 - 39970431
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataa-atactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || || ||||||||||||||||||||| ||| ||||||||  |||||||||||||| |||  |||||||||||||||||| ||||||    
T  39970323 ttgtttcaaaatgaatgttactttacatttccaatacaacattagttttttctcccaactttaccctcactaatttactcaaacttttctctcgcacaat 39970422  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  39970423 tttcaatgc 39970431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 13108993 - 13109095
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttt--tctctcacacaatttttaa 299  Q
    ||||| || |||| ||||||||| |||| |||||||||||||||||| ||||| || ||| ||||||||||| ||||||  |||||||||||||||||||    
T  13108993 aaaatgaatgtcattttacattttcaatgcaactttaattttttcttccaactctatccttaataaatactccaacttttctctctcacacaatttttaa 13109092  T
Q  300 tgc 302  Q
    |||    
T  13109093 tgc 13109095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 3095656 - 3095550
Alignment:
Q  197 gtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacacaattt 295  Q
    |||| ||||| || || ||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||  |||||||||||| |||| |||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaactttaattttttcctcccaactttaccctcaataaatacttcaacttttctctcgcacacttt 3095557  T
Q  296 ttaatgc 302  Q
    | |||||    
T  3095556 tcaatgc 3095550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 27416506 - 27416594
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    ||||| || ||||||||||||||||||||||||||| | |||||| | |||||||||||||||||||||||| ||||||| |||| ||||    
T  27416506 aaaatgaatgtcactttacatttccaatacaacttt-agtttttcgtccaactttaccctcaataaatactccaacttttttctctcaca 27416594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 289
Target Start/End: Original strand, 36915331 - 36915460
Alignment:
Q  161 tgttttaaaattagtgtcgatttagtnnnnnnnnttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttacc 259  Q
    ||||||||||| ||||||| ||||||        |||||| ||||| || |||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  36915331 tgttttaaaatgagtgtcgctttagtcaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttacc 36915430  T
Q  260 ctcaataaatactcaaacttttctctcaca 289  Q
     |||||||||| ||||  |||| |||||||    
T  36915431 ttcaataaatattcaacattttttctcaca 36915460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 34168353 - 34168258
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||      ||||||||||||||||| |||    
T  34168353 aaaatgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactc------ttctctcacacaattttcaat 34168260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 43938136 - 43938227
Alignment:
Q  213 cactttacatttccaatacaactttaattttttctttc--aactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||||||| |||| |||||||||||||| ||||  || |||||  ||||||||||||| |||||||||||| |||| ||||||||||    
T  43938136 cactttacatttcgaatagaactttaattttttttttctaaattttacattcaataaatactccaacttttctctcgcacactttttaatgc 43938227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 38329184 - 38329115
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctca 263  Q
    |||||| ||||| || ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  38329184 ttgttttaaaatgaatgtcactttatattttcaatacaactttaatttttttctttcaactttaccctca 38329115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 5044361 - 5044275
Alignment:
Q  216 tttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||||||| ||||| || |||||||||||  ||| ||||||||  |||||||||||||  ||||||||| ||||||||||||||||    
T  5044361 tttacattttcaatataattttaattttttttcttccaactttattctcaataaatacttcaacttttctatcacacaatttttaat 5044275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 18673247 - 18673157
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    ||||| || ||| |||||||||| |||| | ||||||||||||| ||| |||||||||| | ||||||||||| |||||||||||| ||||    
T  18673247 aaaatgaatgtcgctttacattttcaatgcgactttaatttttttcttccaactttacctttaataaatactccaacttttctctctcaca 18673157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 29931386 - 29931336
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  29931386 ttgttttaaaataaatatcactttacatttccaatacaactttaatttttt 29931336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 2803392 - 2803340
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttct 247  Q
    |||||| |||||||| |||||||||||||| |||||||| |||||||||||||    
T  2803392 ttgtttcaaaataaatgtcactttacattttcaatacaattttaattttttct 2803340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 45187439 - 45187389
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| |||||||| ||||||||| |||| ||||||||||||||||||||    
T  45187439 ttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttt 45187389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 16208955 - 16209016
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctc 262  Q
    ||||| || |||||||||||||| |||||||||||||| |||||||||| || |||||||||    
T  16208955 aaaatgaatgtcactttacattttcaatacaactttaatttttttctttaaattttaccctc 16209016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 41790265 - 41790209
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaacttt 256  Q
    ||||| || ||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41790265 aaaatgaatgtcactttacatttctaatacaactttaattttttttctttcaacttt 41790209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 1774214 - 1774150
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttac 258  Q
    |||||| ||||| || |||| ||||||||| |||||||||||||||| ||||||| |||||||||    
T  1774214 ttgttttaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaactttac 1774150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 156239 - 156289
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || ||||||||||||| |||||| ||||||||||||||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaatttttt 156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 245
Target Start/End: Original strand, 2812828 - 2812858
Alignment:
Q  215 ctttacatttccaatacaactttaatttttt 245  Q
    |||||||||||||||||||||||||||||||    
T  2812828 ctttacatttccaatacaactttaatttttt 2812858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 8107298 - 8107264
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt 245  Q
    |||||||||||||| ||||||||||||||||||||    
T  8107298 gtcactttacattttcaatacaactttaatttttt 8107264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 8471279 - 8471329
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || ||| ||||||||||||||| |||||||||||||||    
T  8471279 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaatttttt 8471329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 33870768 - 33870817
Alignment:
Q  211 gtcactttacatttccaatacaactttaa-ttttttctttcaactttacc 259  Q
    ||||||||| |||| |||||||||||||| ||||||||| ||||||||||    
T  33870768 gtcactttatattttcaatacaactttaatttttttcttccaactttacc 33870817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 1428865 - 1428965
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    ||||| ||||| || ||||||||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaatacaacttaaatttttttcttgcaactttaccctcaataaatactcaaacttttctctcacacaatt 1428964  T
Q  295 t 295  Q
    |    
T  1428965 t 1428965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 28751546 - 28751455
Alignment:
Q  211 gtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatg 301  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  28751546 gtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcgcacaattttcaatg 28751455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 15698905 - 15698803
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt-ttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| |||    
T  15698905 ttgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactctcaataaatactcaaacttttctctcacataat 15698806  T
Q  294 ttt 296  Q
    |||    
T  15698805 ttt 15698803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 11650056 - 11650157
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaatttttctctcacacaat 11650155  T
Q  294 tt 295  Q
    ||    
T  11650156 tt 11650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 44582927 - 44582824
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttc--tctcacacaattttta 298  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||  ||||||| |||||| |    
T  44582927 aaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctatctcacataattttca 44582828  T
Q  299 atgc 302  Q
    ||||    
T  44582827 atgc 44582824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 302
Target Start/End: Complemental strand, 17919957 - 17919866
Alignment:
Q  212 tcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  17919957 tcactttacatttccaatacaactttaatttttttcttccaactttaccctcaatatatactctaacttttttctcacacaattttcaatgc 17919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 2245791 - 2245876
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaat-tttttctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    ||||| || ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2245791 aaaatgaatgtcaccttacattttcaatacaactttaatctttttctttcaactttaccctcaataaatactcaaacttttctctc 2245876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 12002244 - 12002352
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||| |||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||||| ||||||| |||||||||||    
T  12002244 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccagctttaccttcaataaatactccaacttttttctcacacaat 12002343  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  12002344 tttcaatgc 12002352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 12851739 - 12851847
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||||  ||| |||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaatttttttctcccaactttaccctcaatatatactcaaacttttcattcatacaat 12851838  T
Q  294 ttttaatgc 302  Q
    |||||||||    
T  12851839 ttttaatgc 12851847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 26252116 - 26252226
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaac--ttttctctcacaca 291  Q
    |||||| ||||| || |||||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||| |||  ||||||||||||||    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatactctaacttttttctctcacaca 26252215  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  26252216 attttcaatgc 26252226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 672397 - 672327
Alignment:
Q  232 aactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  672397 aactttaattttttcttccaactttaccctcaataaatactctaacttttctctcacacaattttcaatgc 672327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 255068 - 254957
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttct--ctcacac 290  Q
    |||||| ||||| || ||| ||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||| |||||||||  |||||||    
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactcacac 254969  T
Q  291 aatttttaatgc 302  Q
    |||||| |||||    
T  254968 aattttcaatgc 254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 5317731 - 5317624
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||    
T  5317731 ttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactttaccctcaataaatactacaacttttctctc-cacaat 5317633  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  5317632 tttcaatgc 5317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 17806509 - 17806421
Alignment:
Q  215 ctttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||| ||||||||||||| |||||||| |||||    
T  17806509 ctttacatttccaatacaactttaattttttacttccaattttaccttcaataaatactccaacttttctctcatacaattttcaatgc 17806421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 45377297 - 45377197
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || |||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||| |||||| |||||||||||| ||||||||| |||    
T  45377297 aaaatgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctcaatagatactccaacttttctctcgcacaattttcaat 45377198  T
Q  301 g 301  Q
    |    
T  45377197 g 45377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 2459006 - 2459101
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcaca 289  Q
    |||||| ||||| || ||| |||||||||| |||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  2459006 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaacaaatactcaaacttttctctcaca 2459101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 22664937 - 22665041
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattt-tttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || |||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||| ||||| |||||||||  ||    
T  22664937 ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatactccaacttctctctcaca--at 22665034  T
Q  294 ttttaat 300  Q
    |||||||    
T  22665035 ttttaat 22665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 6332164 - 6332272
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt--ttctttcaactttaccctcaataaatactcaaacttttctctcacacaa 292  Q
    |||||| ||||| || ||||||||||||||  || ||||||||||||||  ||||||||||||||| || ||||||||||| ||||||| ||||||||||    
T  6332164 ttgttttaaaatgaatgtcactttacatttttaacacaactttaattttttttctttcaactttactcttaataaatactccaacttttttctcacacaa 6332263  T
Q  293 tttttaatg 301  Q
    |||| ||||    
T  6332264 ttttcaatg 6332272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 296
Target Start/End: Complemental strand, 50158454 - 50158358
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaatttttt--ctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    ||||| || |||||||||||||| ||||||||||||||||||||  ||| |||||||| |||||| |||| ||| ||||||||||||||||||||||    
T  50158454 aaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaacctcaaaaaattctccaacttttctctcacacaatttt 50158358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 50349994 - 50349909
Alignment:
Q  211 gtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    |||||||||||||||||||||||||||||||||||  ||| ||      ||||||||||||||||||||||||||||||||||||| |||||    
T  50349994 gtcactttacatttccaatacaactttaatttttttcttccac------ctcaataaatactcaaacttttctctcacacaattttcaatgc 50349909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 5854380 - 5854270
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttc--tctcacaca 291  Q
    |||||| | |||||| ||| ||||||||||||||| ||||||||||| |||| || |||||||| ||||||||||||||| ||||||||  |||||||||    
T  5854380 ttgtttcagaataaatgtcgctttacatttccaatgcaactttaatttttttattccaactttatcctcaataaatactccaacttttcgatctcacaca 5854281  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  5854280 attttcaatgc 5854270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 11134614 - 11134524
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    ||||| ||||| || |||||||||||||| |||| |||||||||||| || || ||||||| |||||||||||||||| ||||||||||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttctttttccaactttgccctcaataaatactccaacttttctctc 11134524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 52403490 - 52403576
Alignment:
Q  211 gtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    ||||||||| |||| |||||||||||||| |||| | || |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  52403490 gtcactttaaattttcaatacaactttaagttttctattccaactttaccctcaataaatactcaaacttctctctcacataatttt 52403576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 40719016 - 40719113
Alignment:
Q  198 tttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    ||||||||| || |||| |||||||||  ||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  40719016 tttaaaaatgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttcttacacaatt 40719113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 42650402 - 42650295
Alignment:
Q  197 gtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatac-tcaaacttttctctcacacaatt 294  Q
    |||| |||||||| ||| ||||||||||| ||||||||||||||| ||||||| || ||||||| |||| |||||| ||||  |||||||||||||||||    
T  42650402 gttttaaaataaatgtcgctttacatttctaatacaactttaatttttttcttccagctttaccttcaagaaatacttcaactttttctctcacacaatt 42650303  T
Q  295 tttaatgc 302  Q
    || |||||    
T  42650302 ttcaatgc 42650295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 43929710 - 43929784
Alignment:
Q  222 tttccaatacaactttaattttttctttc-aactttaccctcaataaatactcaaacttttctctcacacaatttt 296  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| ||||||    
T  43929710 tttccaatacaactttaattttttccttccaactttaccctcaataaatactc-cacttttctctcacataatttt 43929784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 43738408 - 43738306
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||||| |||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||  || |||||| |||| ||||    
T  43738408 ttgttttaaaatgaatgtcacttcacattttcaatacaacttaaatttttttctttcaactttactctcaataaatacttcaatttttctttcacgcaat 43738309  T
Q  294 ttt 296  Q
    |||    
T  43738308 ttt 43738306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 44024563 - 44024647
Alignment:
Q  215 ctttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctc--tcacacaatttt 296  Q
    |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  44024563 ctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctctcacacaatttt 44024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 48260008 - 48259940
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctc 48259940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 15647215 - 15647126
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctct 285  Q
    |||||| ||||| || |||||||||||||| |||||||| |||  ||||||||  |||||||||||| ||||||||||| |||||||||||    
T  15647215 ttgtttcaaaatgaatgtcactttacattttcaatacaaatttt-ttttttctcccaactttacccttaataaatactccaacttttctct 15647126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 43755058 - 43755112
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaacttt 256  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  43755058 aaaatgaacgtcactttacattttcaatacaactttaattttttcttccaacttt 43755112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 28200351 - 28200286
Alignment:
Q  222 tttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctc 286  Q
    |||| ||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  28200351 tttcaaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctc 28200286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 35149527 - 35149447
Alignment:
Q  203 aaataaacgtcactttacatttccaatacaactttaatt--ttttctttcaactttaccctcaataaatactcaaactttt 281  Q
    |||||||  |||||||| |||||||||||||||||||||  ||||||||||| |||||| |||||||||| | ||||||||    
T  35149527 aaataaatttcactttatatttccaatacaactttaattttttttctttcaattttaccttcaataaatatttaaactttt 35149447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 48320144 - 48320081
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttac 258  Q
    |||||| |||||||| || |||||| |||| |||||||| ||||||||||||||||||||||||    
T  48320144 ttgttttaaaataaatgttactttatattttcaatacaaatttaattttttctttcaactttac 48320081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 84648 - 84598
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  84648 ttgttttaaaatgaatgtcactttacatttccaatacaactttaatttttt 84598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 26582923 - 26582973
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaatttttt 26582973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 38132322 - 38132272
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 38132272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 40061044 - 40060983
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttc-aactttaccctc 262  Q
    ||||| || |||||||||||||| |||||||||||||||||||| |||| ||||||||||||    
T  40061044 aaaatgaatgtcactttacattttcaatacaactttaattttttttttcaaactttaccctc 40060983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 44583770 - 44583878
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaa-ttttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| || ||||| ||||||||  ||||||||||||| |||||||||   |||||||||| ||||| ||||| ||||||||| ||||| | |    
T  44583770 ttgttttaaaatgaatgtcaccttacatttttaatacaactttaatttttttcttctgactttacccttaataagtactctaacttttctttcacatagt 44583869  T
Q  294 ttttaatgc 302  Q
    ||| |||||    
T  44583870 tttcaatgc 44583878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 24041155 - 24041105
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||||||||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 24041105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 1430666 - 1430617
Alignment:
Q  196 tgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    ||||| ||||| || ||||||||||||||| |||||||||||||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttt 1430617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 9552484 - 9552436
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt 243  Q
    |||||| ||||| || |||| ||||||||||||||||||||||||||||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttt 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 9333105 - 9333155
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| |||||||| || |||||||||||| ||||||| |||||||||||    
T  9333105 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttt 9333155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 9356878 - 9356928
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt 245  Q
    |||||| |||||||| || |||||||||||| ||||||| |||||||||||    
T  9356878 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttt 9356928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 10691069 - 10691023
Alignment:
Q  211 gtcactttacatttccaatacaactttaa-ttttttctttcaacttt 256  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||    
T  10691069 gtcactttacattttcaatacaactataatttttttctttcaacttt 10691023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 245
Target Start/End: Original strand, 49894825 - 49894854
Alignment:
Q  216 tttacatttccaatacaactttaatttttt 245  Q
    ||||||||||||||||||||||||||||||    
T  49894825 tttacatttccaatacaactttaatttttt 49894854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 37437530 - 37437482
Alignment:
Q  215 ctttacatttccaatacaactttaatt-ttttctttcaactttaccctc 262  Q
    |||||||||| |||||||| ||||||| |||||||||||||||| ||||    
T  37437530 ctttacattttcaatacaattttaattattttctttcaactttatcctc 37437482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 321724 - 321834
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaactttt--ctctcacaca 291  Q
    |||||| ||||| || ||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||  ||||||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcaataattactcaaacttttcgctctcacaca 321823  T
Q  292 atttttaatgc 302  Q
    ||||| |||||    
T  321824 attttcaatgc 321834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 4263 - 4161
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| |||||||| || |||||||||||| ||||||| ||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||| |||    
T  4263 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttttcttccaactttatcctcaataaatactccaacttttctctcacataat 4164  T
Q  294 ttt 296  Q
    |||    
T  4163 ttt 4161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 8156 - 8260
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttt---ttctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || |||| ||||||||| ||||||||||||||||||   |||||||||||||| |||||| |||||||| |||||||||||||||||    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttttctttcaactttaacctcaaaaaatactccaacttttctctcacaca 8255  T
Q  292 atttt 296  Q
    |||||    
T  8256 atttt 8260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 70609 - 70512
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatttttt-ctttcaactttaccctcaataaatactcaaacttttctctcacaca 291  Q
    |||||| ||||| || |||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||    
T  70609 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcaca 70512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 13213 - 13106
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaat 293  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||||  ||||||||||   ||||||    
T  13213 ttgttttaaaatgaacgtcactttacatttccaatacaattttaatttttttctcccaactttaccctcaataaatacttcaacttttctccggcacaat 13114  T
Q  294 ttttaatg 301  Q
    ||| ||||    
T  13113 tttcaatg 13106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 7852 - 7746
Alignment:
Q  195 ttgtttaaaaataaacgtcactttacatttccaatacaactttaattttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatt 294  Q
    |||||| ||||| || ||||||||||||||  ||||||||||| | |||||||| ||||||||  |||||||||||||  ||||||||||||||||||||    
T  7852 ttgttttaaaatgaatgtcactttacatttt-aatacaacttttaatttttcttccaactttaatctcaataaatacttcaacttttctctcacacaatt 7754  T
Q  295 tttaatgc 302  Q
    || |||||    
T  7753 ttcaatgc 7746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 16186 - 16085
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttttctttcaa-ctttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    |||||||| ||| ||||| ||||  |||||||||||||||||||  ||||| |||||||||||||||||| || ||| |||||||||||||||||| |||    
T  16186 aaaataaatgtctctttatatttttaatacaactttaatttttttcttcaaactttaccctcaataaatattccaacctttctctcacacaattttcaat 16087  T
Q  301 gc 302  Q
    ||    
T  16086 gc 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 1548 - 1649
Alignment:
Q  202 aaaataaacgtcactttacatttccaatacaactttaattttt-tctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaat 300  Q
    ||||| || ||||||||| |||||||||||||||||||||||| || | |||||||| ||||||||||  ||| ||||||||||||||| |||||| |||    
T  1548 aaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttcaat 1647  T
Q  301 gc 302  Q
    ||    
T  1648 gc 1649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 12220 - 12127
Alignment:
Q  201 aaaaataaacgtcactttacatttccaatacaactttaatt-ttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaa 299  Q
    |||||| || |||| ||||||||||||||| |||||||||| ||||||| ||||||||||||         |||||||||||||||||||||||||| ||    
T  12220 aaaaatgaatgtcattttacatttccaatataactttaatttttttcttccaactttaccct---------ctcaaacttttctctcacacaattttcaa 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 158145 - 158206
Alignment:
Q  241 tttttctttcaactttaccctcaataaatactcaaacttttctctcacacaatttttaatgc 302  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||| || |||||| |||||    
T  158145 tttttttttcaactttaccctcaataaatactacaacttttctctcgcataattttcaatgc 158206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University