View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0979_low_2 (Length: 227)
Name: NF0979_low_2
Description: NF0979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0979_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 36345367 - 36345146
Alignment:
| Q |
1 |
ttcaacccaaccttctatatcattctcaccatttcctccaaagtgtcttccaccacacaaccttgcaatcattcctgcaatcacacctactatagtgatc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
36345367 |
ttcaacccaaccttctatatcattctcaccatttcctccaaagtgtcttccaccacacaaccttgcaatcattccagcaatcacacctactatagtgatc |
36345268 |
T |
|
| Q |
101 |
actgctatcaccactatcaatgtctcaattgatcgatgtgaataacgattttgttctgacgcattaggcggtgcttcaacatagggctgcatttcactcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
36345267 |
actgctatcaccactatcaatgtctcaattgatcgatgtgaataacgattttgttctgccgcattaggcggtgcttcaacatagggctgcatttcactcc |
36345168 |
T |
|
| Q |
201 |
cttgtcttccacctatgattct |
222 |
Q |
| |
|
||||||||||| | |||||||| |
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|
| T |
36345167 |
cttgtcttccatccatgattct |
36345146 |
T |
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