View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0980-2 (Length: 252)
Name: NF0980-2
Description: NF0980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0980-2 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 50362594 - 50362838
Alignment:
| Q |
8 |
gcaaggcatttggcaaacatgtatggagatttttgcttctttgttgaagttaaaaatactgaagtaggaaggaagataatttagttgttgggtatactgg |
107 |
Q |
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| T |
50362594 |
gcaaggcatttggcaaacatgtatggagatttttgcttctttgttgaagttaaaaatactgaagtaggaaggaagataatttagttgttgggtatactgg |
50362693 |
T |
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| Q |
108 |
tttatgcataaatgtagcacgagatatactcaatgaggaatgaaaaaagtgcagatcatgcaatgcataagagcaatggtgcaggcaacaaataaatatt |
207 |
Q |
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| T |
50362694 |
tttatgcataaatgtagcacgagatatactcaatgacgaatgaaaaaagtgcagatcatgcaatgcataagagcaatggtgcaggcgacaaataaatatt |
50362793 |
T |
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| Q |
208 |
ataagtgtttatttgtttttgtgcaagaatactataagtgtttat |
252 |
Q |
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| T |
50362794 |
ataagtgtttatttgtttttgtgcaagaatactataagtgtttat |
50362838 |
T |
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