View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0981_low_4 (Length: 211)
Name: NF0981_low_4
Description: NF0981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0981_low_4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 50101347 - 50101557
Alignment:
| Q |
1 |
aagcgatgttcaggattctccttcacatttcgagattttgaagctacgtcaacgttgggaactcgcttccgttctccatttccttgacgtaagatattcg |
100 |
Q |
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| T |
50101347 |
aagcgatgttcaggattctccttcacatttcgagattttgaagctacgtcaacgttgggaactcgcttccgttctccatttccttgacgtaagatattcg |
50101446 |
T |
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| Q |
101 |
cgtcattcatcctctggttcgaatgttcctattaggttacgattcgtaatcatctcagtaacattttttgtggttcgcgtgattcaggtgtttagtccat |
200 |
Q |
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| T |
50101447 |
cgttattcatcgtctggttcgaatgttcctattaggttacgattcgtaatcatcttagtaacattttttgtggttcgtgtgattcaggtgtttagtccat |
50101546 |
T |
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| Q |
201 |
tacttggtaat |
211 |
Q |
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| T |
50101547 |
tacttggtaat |
50101557 |
T |
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