View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0982_low_6 (Length: 252)
Name: NF0982_low_6
Description: NF0982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0982_low_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 45078826 - 45079072
Alignment:
| Q |
1 |
agagaagaaacaaaggcaattgagttcttaccttcgtggaggtttgctaatgggatgttcgctttggtcctttcatttggccttctccttactgcattaa |
100 |
Q |
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|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45078826 |
agagaagatacaaaagcaattgagttcttaccttcgtggaggtttgctaatgggatgttcgctttggtcctttcatttggccttctccttactgcattaa |
45078925 |
T |
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| Q |
101 |
aaagcagaaaggctagatcatggcgttatggtagtggtaagtgctatataatatacatatgcagattgtctctgcaacttaaaagttctgaacccgtcac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| |
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| T |
45078926 |
aaagcagaaaggctagatcatggcgttatggtagtggtaagtgct-----atatacatatgtaaattgtctctgcaacttaaaagttctgaacccgtcac |
45079020 |
T |
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| Q |
201 |
tgcatataatcatttggttttcttagaaaataatttatttaactttaactac |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45079021 |
tgcatataatcatttggttttcttagaaaataatttatttaactttaactac |
45079072 |
T |
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