View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0984-Insertion-17 (Length: 134)

Name: NF0984-Insertion-17
Description: NF0984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0984-Insertion-17
NF0984-Insertion-17
[»] chr8 (1 HSPs)
chr8 (8-134)||(43461795-43461921)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 6e-66; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 6e-66
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 43461795 - 43461921
Alignment:
Q  8 gttttttattgatatattttagcaaatgagacttttgagaaggttgcaaatgtaggacttcatgtgaacatggttttgtacctgctaaacgagtatcatg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43461795 gttttttattgatatattttagcaaatgagacttttgagaaggttgcaaatgtaggacttcatgtgaacatggttttgtacctgctaaacgagtatcatg 43461894  T
Q  108 cagagccttcaactgcggctatcataa 134  Q
    |||||||||||||||||||||||||||    
T  43461895 cagagccttcaactgcggctatcataa 43461921  T

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