View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0984-Insertion-9 (Length: 493)
Name: NF0984-Insertion-9
Description: NF0984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0984-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 8 - 418
Target Start/End: Complemental strand, 37032593 - 37032195
Alignment:
| Q |
8 |
ggctgtgctgccgtttgaagagctctcagattgattttccttcatctttttgcggcgtttgataagacgtaactctttcttctcatcggtacccacttca |
107 |
Q |
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| T |
37032593 |
ggctgtgctgccgtttgaagagctctcagattgattttccttcatctttttgcggcgtttgataagacgtaactctttcttctcattggtacccacttca |
37032494 |
T |
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| Q |
108 |
gcaaatttccttagtagctcatcagaagatttctttgttactcgttgaaccttagcatcagtagtagcagaagaagcagaggtagttgttggggcagtag |
207 |
Q |
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| T |
37032493 |
gcaaatttccttagtagctcgtcagaagatttctttgttactcgttgaaccttagcatcagtagtagcagaagaagcagaggtagttgttggggcagtag |
37032394 |
T |
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| Q |
208 |
agttgttagtttccattgcaagagagtaagaaaaatgttaatgaaaatgtgagaaaaatgttaatatgatttgatggttttatgaggatggatggaccgt |
307 |
Q |
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| T |
37032393 |
agttgttagtttccattgcaagagagtaagaaaa------------atgtgagaaaaatgttaatatgatttgatggttttatgaggatggatggaccgt |
37032306 |
T |
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| Q |
308 |
tataggaatccaaaatgttaatgagggaaatgattgttaatgaaattgaataatggaagtgaggtaaggaaatatagccgttgggttgagatcttgttgt |
407 |
Q |
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| T |
37032305 |
tataggaatccaaaatgttaatgagggaaatgattgttaatgaaattgaataatggaagtgaggtaaggaaatatagccgttgggttgagatcttgttgt |
37032206 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 493
Target Start/End: Complemental strand, 37032164 - 37032120
Alignment:
| Q |
449 |
ggctgtattggcattttgactaggcaacaacgcatggcatgtgga |
493 |
Q |
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| T |
37032164 |
ggctgtattggtattttgactaggcaacaaggcatggcatgtgga |
37032120 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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