View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0987_low_9 (Length: 214)
Name: NF0987_low_9
Description: NF0987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0987_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 12636967 - 12636786
Alignment:
| Q |
24 |
caaatatcaacctgtttgcacaaacttaaaccatcattcatctcataggccgcaaatattaggtctagtaaggattaatgacgttgtttatggaaaacca |
123 |
Q |
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| T |
12636967 |
caaatatcaacctgtttgcacaaacttaaaccatcattcatctcataggccgcaaatattaagtctagtaaggattaatgacgttgtttatggaaaacca |
12636868 |
T |
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| Q |
124 |
atagatgcttcatccaacaatcatgatcccttctagatcaatataattgtttgatgcccacacaatcctaagtcattcatat |
205 |
Q |
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| T |
12636867 |
atagatgcttcatccaacaatcatgatcccttctagatcaatataattctttgatgcccacacaatcctaagtcattcatat |
12636786 |
T |
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