View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0989-Insertion-9 (Length: 232)
Name: NF0989-Insertion-9
Description: NF0989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0989-Insertion-9 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 1730512 - 1730289
Alignment:
| Q |
7 |
aaactattggtccagatattattaattatgtgtttactgttctcaataacatgggaggtccttgtaatatcaactacacatttatatgtttgtttcccaa |
106 |
Q |
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| T |
1730512 |
aaactattggtccagatattattaattatgtgtttactgttctcaataacatgggaggtccttgtaatatcaactacacatttatatgtttgtttcccaa |
1730413 |
T |
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| Q |
107 |
gaagaatgacccaaaacttccttctgactataggtctatatttctctcagcattgtggttgtgaaaattgttaccaaaacgatagccaataagattaata |
206 |
Q |
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| T |
1730412 |
ggagaatgacccaaaacttccttctgactataggtc--tatttttctcagcattgtggttgtgaaaattgttaccaaaacgatagccaataagattaata |
1730315 |
T |
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| Q |
207 |
ctattcttccgaattttataagtcta |
232 |
Q |
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| T |
1730314 |
ctattcttccgaattttataagtcta |
1730289 |
T |
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