View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0989_low_2 (Length: 579)
Name: NF0989_low_2
Description: NF0989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0989_low_2 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 440; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 30 - 481
Target Start/End: Original strand, 26692903 - 26693354
Alignment:
| Q |
30 |
atcatcattctctctctcggttgaaaaacacaaagaagatattataatatcaccaaaaggcacattcaccgccggtttttatcccgtaggtgaaaatgct |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
26692903 |
atcatcattctctctctcggttgaaaaacacgaagaagatattataatatcaccaaaaggcacattcactgcgggtttttatcccgtaggtgaaaatgct |
26693002 |
T |
|
| Q |
130 |
tattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgct |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26693003 |
tattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgct |
26693102 |
T |
|
| Q |
230 |
caagactttcccttctcaaaaccgggaaccttgtattaactgacgcgggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagtt |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26693103 |
caagactttcccttctcaaaaccgggaaccttgtattaactgacgcgggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagtt |
26693202 |
T |
|
| Q |
330 |
gattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaattggtttcgttttgtggcaaagctttgattttccaacagataccctccttcct |
429 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26693203 |
gattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaattggtttcgttttgtggcaaagctttgattttccaacagataccctccttcct |
26693302 |
T |
|
| Q |
430 |
gatcaaagtttcacaaggcacatgaaacttgtttcctccaaaagtggcaaca |
481 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26693303 |
gatcaaagtttcacaaggcacatgaaacttgtttcctccaaaagtggcaaca |
26693354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 30 - 480
Target Start/End: Complemental strand, 26677339 - 26676889
Alignment:
| Q |
30 |
atcatcattctctctctcggttgaaaaacacaaagaagatattataatatcaccaaaaggcacattcaccgccggtttttatcccgtaggtgaaaatgct |
129 |
Q |
| |
|
|||||||||||| ||||| || ||||||| | || |||| |||||||| ||||| ||||| ||||| ||||| || |||||| |||| |||||||||||| |
|
|
| T |
26677339 |
atcatcattctccctctcagtggaaaaacccgaacaagacattataatgtcacccaaaggtacatttaccgcaggcttttattccgtcggtgaaaatgct |
26677240 |
T |
|
| Q |
130 |
tattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgct |
229 |
Q |
| |
|
||||| || ||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
26677239 |
tattcctttgccatatggttcactcaaatacacaaaaatctaaacaacgctactgttgtttggatggcaaatcgtgaccaaccagttaacggaaaacgct |
26677140 |
T |
|
| Q |
230 |
caagactttcccttctcaaaaccgggaaccttgtattaactgacgcgggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagtt |
329 |
Q |
| |
|
||| ||||||||||||||||||||| ||||| || ||||| || || ||||||| |||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26677139 |
caacactttcccttctcaaaaccggcaacctcgtcttaaccgatgcaggacattccaatgtatggtccacaaatactaactcatccaaaccacttgagtt |
26677040 |
T |
|
| Q |
330 |
gattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaattggtttcgttttgtggcaaagctttgattttccaacagataccctccttcct |
429 |
Q |
| |
|
| |||| ||||| | |||||| || || ||| |||| | ||| | || ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26677039 |
gtttttatacgacataggaaaccttgttctccgagaacgcaaaacaaatggtttcattttgtggcgaagctttgattttccaacagataccctccttcct |
26676940 |
T |
|
| Q |
430 |
gatcaaagtttcacaaggcacatgaaacttgtttcctccaaaagtggcaac |
480 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||| |||| |
|
|
| T |
26676939 |
gatcaaagtttcacaaggtacatgaaacttgtttcctcgaaaagtgacaac |
26676889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 30 - 480
Target Start/End: Original strand, 26688751 - 26689201
Alignment:
| Q |
30 |
atcatcattctctctctcggttgaaaaacacaaagaagatattataatatcaccaaaaggcacattcaccgccggtttttatcccgtaggtgaaaatgct |
129 |
Q |
| |
|
|||||||||||| ||||| || ||||||| | || |||| |||||||| ||||| ||||| ||||| ||||| || |||||| |||| |||||||||||| |
|
|
| T |
26688751 |
atcatcattctccctctcagtggaaaaacccgaacaagacattataatgtcacccaaaggtacatttaccgcaggcttttattccgtcggtgaaaatgct |
26688850 |
T |
|
| Q |
130 |
tattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgct |
229 |
Q |
| |
|
||||| || ||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
26688851 |
tattcctttgccatatggttcactcaaatacacaaaaatctaaacaacgctactgttgtttggatggcaaatcgtgaccaaccagttaacggaaaacgct |
26688950 |
T |
|
| Q |
230 |
caagactttcccttctcaaaaccgggaaccttgtattaactgacgcgggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagtt |
329 |
Q |
| |
|
||| ||||||||||||||||||||| ||||| || ||||| || || ||||||| |||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26688951 |
caacactttcccttctcaaaaccggcaacctcgtcttaaccgatgcaggacattccaatgtatggtccacaaatactaactcatccaaaccacttgagtt |
26689050 |
T |
|
| Q |
330 |
gattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaattggtttcgttttgtggcaaagctttgattttccaacagataccctccttcct |
429 |
Q |
| |
|
| |||| || || | |||||| || || ||| |||| | ||| | || ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26689051 |
gtttttatatgacataggaaaccttgttctccgagaacgcaaaacaaatggtttcattttgtggcgaagctttgattttccaacagataccctccttcct |
26689150 |
T |
|
| Q |
430 |
gatcaaagtttcacaaggcacatgaaacttgtttcctccaaaagtggcaac |
480 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||| |||| |
|
|
| T |
26689151 |
gatcaaagtttcacaaggtacatgaaacttgtttcctcgaaaagtgacaac |
26689201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 86 - 473
Target Start/End: Complemental strand, 26715628 - 26715242
Alignment:
| Q |
86 |
aaggcacattcaccgccggtttttatcccgtaggtgaaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgt |
185 |
Q |
| |
|
|||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
26715628 |
aaggcacattcaccgcaggcttttatccggtacgtgaaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacctcaccaatgctaccgt |
26715529 |
T |
|
| Q |
186 |
tgtttggatggcaaatcgtgaccaacctgttaacggaaaatgctcaagactttcccttctcaaaaccgggaaccttgtattaactgacgcgggacatttt |
285 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |||| | |||||||||||| || ||||| ||||| | ||||| ||||| ||||| ||| |
|
|
| T |
26715528 |
tgtttggatggcaaatcgtgaccaaccagttaacggaaac-gctcgacactttcccttcttaataccggcaacctcattttaaccgacgcaggacagttt |
26715430 |
T |
|
| Q |
286 |
gatgtttggtccacaaacactaactcatccaaaccacttgagttgattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaattggtttcg |
385 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||| ||||||||| | ||||||| || ||||||| ||||||| |
|
|
| T |
26715429 |
aatgtttggtccacaaacacatactcactcaaacaacttgagttggttttgtacgatacgggaaatctcattttcagagaacataacaaaaatggtttca |
26715330 |
T |
|
| Q |
386 |
ttttgtggcaaagctttgattttccaacagataccctccttcctgatcaaagtttcacaaggcacatgaaacttgtttcctccaaaag |
473 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
26715329 |
ttttgtggcgaagttttgattttccaacagataccctccttcccgatcaaagtttcacaaggtacatgaaccttgtttcgtccaaaag |
26715242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 79 - 473
Target Start/End: Complemental strand, 26738875 - 26738481
Alignment:
| Q |
79 |
tcaccaaaaggcacattcaccgccggtttttatcccgtaggtgaaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacg |
178 |
Q |
| |
|
||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
26738875 |
tcacccaaaggcacattcaccgcgggcttttatcctgtaggcgaaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacctcaccaatg |
26738776 |
T |
|
| Q |
179 |
ctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgctcaagactttcccttctcaaaaccgggaaccttgtattaactgacgcggg |
278 |
Q |
| |
|
|||||||||||||||||||||||||||| || || || ||||||||| |||| | |||||||||||| || ||||| ||||| | ||||| ||||| || |
|
|
| T |
26738775 |
ctaccgttgtttggatggcaaatcgtgaacagccagtaaacggaaaacgctcgacactttcccttcttaataccggcaacctcattttaaccgacgcagg |
26738676 |
T |
|
| Q |
279 |
acattttgatgtttggtccacaaacactaactcatccaaaccacttgagttgattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaatt |
378 |
Q |
| |
|
||| ||| |||||||||| |||||||| ||||| ||||| |||||||||| ||||||||||||| ||||||||| | |||||||| || |||| || | |
|
|
| T |
26738675 |
acagtttaatgtttggtctacaaacacatactcactcaaacaacttgagttggttttgtacgatacgggaaatctcattctcagagaacataacacaaat |
26738576 |
T |
|
| Q |
379 |
ggtttcgttttgtggcaaagctttgattttccaacagataccctccttcctgatcaaagtttcacaaggcacatgaaacttgtttcctccaaaag |
473 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
26738575 |
ggtttcattttgtggcaaagttttgattttccaacagataccctccttcccgatcaaagtttcacaaggtacatgaaccttgtttcgtccaaaag |
26738481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 70 - 473
Target Start/End: Complemental strand, 26745919 - 26745513
Alignment:
| Q |
70 |
attataatatcaccaaaaggcacattcaccgccggtttttatcccgtaggtgaaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacc |
169 |
Q |
| |
|
|||||| | ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26745919 |
attatagtctcacccaaaggcacattcaccgcgggtttttatcccgtaggtgaaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacc |
26745820 |
T |
|
| Q |
170 |
tcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgctcaagactttcccttctcaaaaccgggaaccttgtattaac |
269 |
Q |
| |
|
| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| || ||||| | ||||| |
|
|
| T |
26745819 |
tttccaatcctaccgttgtttggatggctaatcgtgaccaacctgttaacggaaaacgctcaacactttcccttctcaaaactggcaacctcattttaac |
26745720 |
T |
|
| Q |
270 |
tgacgcgggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagttgattttgtacgatacaggaaatctcgtcctcagagagcac |
369 |
Q |
| |
|
||||| ||||| || | |||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||||||| | || |||| ||| |
|
|
| T |
26745719 |
cgacgcaggacagttcaacgtttggtccacaaacactaactcatccaaaaaacttgagttgtttttgtgcgacacaggaaatctcattcttcgagaacac |
26745620 |
T |
|
| Q |
370 |
aacaaaattggtttc---gttttgtggcaaagctttgattttccaacagataccctccttcctgatcaaagtttcacaaggcacatgaaacttgtttcct |
466 |
Q |
| |
|
|||| |||| || | | |||||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
26745619 |
aacactattgtttccaatttcttgtggcagagttttgattccccaacagatactctccttcctgatcaaagtttcacaaggtacatgcaactcatttcct |
26745520 |
T |
|
| Q |
467 |
ccaaaag |
473 |
Q |
| |
|
| ||||| |
|
|
| T |
26745519 |
caaaaag |
26745513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 30 - 481
Target Start/End: Complemental strand, 26700512 - 26700061
Alignment:
| Q |
30 |
atcatcattctctctctcggttgaaaaacacaaagaagatattataatatcaccaaaaggcacattcaccgccggtttttatcccgtaggtgaaaatgct |
129 |
Q |
| |
|
|||||||||||| ||||| ||||||||| | |||| || |||||| | ||||| ||||| |||||||| || ||||| || || || || ||||||||| |
|
|
| T |
26700512 |
atcatcattctccctctcagttgaaaaattcgaagatgacattatagtctcacctaaaggtacattcacagcaggtttctaccctgttggagaaaatgct |
26700413 |
T |
|
| Q |
130 |
tattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgct |
229 |
Q |
| |
|
||||| || || ||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
26700412 |
tattcctttgctatatggttcacccaaaaacacaaaaatctcaacaacgctaccgttgtttgggtggcaaatcgtgaccaaccagttaacggaaaacgct |
26700313 |
T |
|
| Q |
230 |
caagactttcccttctcaaaaccgggaaccttgtattaactgacgcgggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagtt |
329 |
Q |
| |
|
||| |||||||||||| |||||||| |||||||||||||| || || || | |||||||||| ||| | || |||||||||||| ||||| |||| |
|
|
| T |
26700312 |
caacactttcccttcttaaaaccggcaaccttgtattaaccgatgcaggggtgtccaatgtttggtcaacagaaacaaactcatccaaatcacttcagtt |
26700213 |
T |
|
| Q |
330 |
gattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaattggtttcgttttgtggcaaagctttgattttccaacagataccctccttcct |
429 |
Q |
| |
|
| |||||||||| |||||||| ||||| || ||||| || ||| || ||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
26700212 |
gtttttgtacgaaacaggaaacctcgttctgagagaacaagacataaatggtttcgttttgtggcaaagttttgatttcccaacagatactctccttcct |
26700113 |
T |
|
| Q |
430 |
gatcaaagtttcacaaggcacatgaaacttgtttcctccaaaagtggcaaca |
481 |
Q |
| |
|
|||||| ||| || || ||||||| |||||||| || | ||||| ||||| |
|
|
| T |
26700112 |
gatcaagatttgactgggtacatgaaccttgtttcgtcaagaagtgtcaaca |
26700061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 177 - 436
Target Start/End: Complemental strand, 26735522 - 26735263
Alignment:
| Q |
177 |
cgctaccgttgtttggatggcaaatcgtgaccaacctgttaacggaaaatgctcaagactttcccttctcaaaaccgggaaccttgtattaactgacgcg |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| |||||||||||| || ||||| || || |||||||| || || |
|
|
| T |
26735522 |
cgctaccgttgtttggatggcaaatcgtgatcaaccagttaatggaaaacgctcaacactttcccttcttaataccggcaatctagtattaaccgatgct |
26735423 |
T |
|
| Q |
277 |
ggacattttgatgtttggtccacaaacactaactcatccaaaccacttgagttgattttgtacgatacaggaaatctcgtcctcagagagcacaacaaaa |
376 |
Q |
| |
|
|| | | |||||||| || || |||| |||||||||| ||||| ||||| |||||||||| |||||||| ||||| || ||||| || ||| || |
|
|
| T |
26735422 |
gggttgtccaacgtttggtcgactaaaactagctcatccaaagcacttcagttgtttttgtacgaaacaggaaacctcgttctgagagaacaagacataa |
26735323 |
T |
|
| Q |
377 |
ttggtttcgttttgtggcaaagctttgattttccaacagataccctccttcctgatcaaa |
436 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
26735322 |
atggtttcgttttgtggcaaagttttgatttcccaacagatactctccttcctgatcaaa |
26735263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 122 - 269
Target Start/End: Complemental strand, 26752810 - 26752663
Alignment:
| Q |
122 |
aaaatgcttattcattcgccatatggttcactcaaaaacacaaaaacctcgccaacgctaccgttgtttggatggcaaatcgtgaccaacctgttaacgg |
221 |
Q |
| |
|
||||||||||||| || |||||||||||||| |||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||| ||||| || |
|
|
| T |
26752810 |
aaaatgcttattcctttgccatatggttcacccaaaaacacaaaaatctcaacaacactaccattgtttggatggcaaatcgtgaccaaccagttaatgg |
26752711 |
T |
|
| Q |
222 |
aaaatgctcaagactttcccttctcaaaaccgggaaccttgtattaac |
269 |
Q |
| |
|
|||| |||||| |||||||||||||||||| || ||||| || ||||| |
|
|
| T |
26752710 |
aaaacgctcaacactttcccttctcaaaactggaaacctcgtcttaac |
26752663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 478 - 551
Target Start/End: Complemental strand, 26752135 - 26752062
Alignment:
| Q |
478 |
aacagggttggtttgtttcgggtcaatttcgtcaacaaccttgttttattcatggaatttgtgggcctaatagt |
551 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26752135 |
aacagggttggtttgtttcgggtcaatttcgtcaacaaccttgttttattcatggaatttgtgggcctaatagt |
26752062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Original strand, 47192134 - 47192173
Alignment:
| Q |
391 |
tggcaaagctttgattttccaacagataccctccttcctg |
430 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
47192134 |
tggcaaagctttgattttccaacagatactcttcttcctg |
47192173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Original strand, 39130816 - 39130863
Alignment:
| Q |
388 |
ttgtggcaaagctttgattttccaacagataccctccttcctgatcaa |
435 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| ||||||||| ||||| |
|
|
| T |
39130816 |
ttgtggcaaagctatgattttccaacaaatactctccttcctaatcaa |
39130863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 473
Target Start/End: Complemental strand, 18660082 - 18659997
Alignment:
| Q |
388 |
ttgtggcaaagctttgattttccaacagataccctccttcctgatcaaagtttcacaaggcacatgaaacttgtttcctccaaaag |
473 |
Q |
| |
|
||||||||||||| |||||| |||||| |||| ||||||||| ||||| | |||| || |||| ||||||||||| || ||||| |
|
|
| T |
18660082 |
ttgtggcaaagctatgatttcccaacaaatactctccttcctaatcaacctctcactagatacataaaacttgtttcttcaaaaag |
18659997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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