View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0995-Insertion-5 (Length: 661)

Name: NF0995-Insertion-5
Description: NF0995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0995-Insertion-5
NF0995-Insertion-5
[»] chr2 (78 HSPs)
chr2 (105-661)||(40022432-40022995)
chr2 (114-295)||(23748166-23748342)
chr2 (11-75)||(40022331-40022395)
chr2 (124-294)||(31795767-31795932)
chr2 (105-295)||(36347538-36347723)
chr2 (214-295)||(17380007-17380088)
chr2 (135-295)||(9631652-9631807)
chr2 (105-257)||(39732764-39732910)
chr2 (105-292)||(19566820-19567003)
chr2 (105-181)||(16565837-16565915)
chr2 (211-294)||(35736350-35736433)
chr2 (216-291)||(36046205-36046280)
chr2 (139-291)||(34209560-34209707)
chr2 (227-292)||(35736175-35736240)
chr2 (209-296)||(8426875-8426962)
chr2 (105-168)||(41778835-41778898)
chr2 (127-173)||(7681332-7681378)
chr2 (224-294)||(15224870-15224940)
chr2 (105-174)||(2241472-2241541)
chr2 (219-292)||(22356175-22356248)
chr2 (115-254)||(15224732-15224866)
chr2 (244-292)||(17379846-17379894)
chr2 (224-292)||(36347717-36347785)
chr2 (105-266)||(36566876-36567033)
chr2 (220-287)||(8427043-8427110)
chr2 (128-183)||(18811413-18811468)
chr2 (127-174)||(37740004-37740051)
chr2 (128-174)||(17379897-17379943)
chr2 (224-290)||(35531832-35531898)
chr2 (224-294)||(42813796-42813866)
chr2 (127-188)||(12751899-12751960)
chr2 (224-297)||(16713487-16713560)
chr2 (124-168)||(8426990-8427034)
chr2 (224-292)||(45257483-45257551)
chr2 (117-168)||(886990-887041)
chr2 (243-294)||(41778771-41778822)
chr2 (209-295)||(2241579-2241665)
chr2 (224-290)||(9426987-9427053)
chr2 (248-290)||(36046401-36046443)
chr2 (225-275)||(39821686-39821736)
chr2 (224-290)||(41841684-41841750)
chr2 (210-294)||(7681406-7681488)
chr2 (124-165)||(29525855-29525896)
chr2 (209-257)||(1583238-1583286)
chr2 (105-165)||(2381109-2381169)
chr2 (133-169)||(20545799-20545835)
chr2 (219-286)||(31061530-31061598)
chr2 (124-168)||(35736256-35736300)
chr2 (224-292)||(42296479-42296547)
chr2 (105-181)||(45257369-45257445)
chr2 (209-292)||(9427147-9427230)
chr2 (127-174)||(12541850-12541897)
chr2 (249-284)||(15224153-15224188)
chr2 (105-188)||(28262542-28262625)
chr2 (224-295)||(34187572-34187643)
chr2 (210-257)||(39821831-39821878)
chr2 (39-73)||(17379842-17379876)
chr2 (243-285)||(31928062-31928104)
chr2 (223-285)||(31928224-31928286)
chr2 (113-174)||(3094466-3094527)
chr2 (124-165)||(6721744-6721785)
chr2 (113-174)||(9427055-9427116)
chr2 (229-294)||(17331413-17331478)
chr2 (123-168)||(21662328-21662372)
chr2 (128-181)||(33265691-33265744)
chr2 (36-73)||(36347755-36347792)
chr2 (133-174)||(41841772-41841813)
chr2 (123-168)||(45098249-45098294)
chr2 (224-292)||(887286-887353)
chr2 (248-292)||(8554451-8554495)
chr2 (105-165)||(22356027-22356087)
chr2 (247-295)||(31061356-31061404)
chr2 (41-73)||(35736173-35736205)
chr2 (224-292)||(39732904-39732972)
chr2 (124-164)||(39821750-39821790)
chr2 (244-292)||(40022363-40022410)
chr2 (142-174)||(42316877-42316909)
chr2 (248-296)||(45257303-45257351)
[»] chr4 (91 HSPs)
chr4 (105-292)||(54935130-54935313)
chr4 (114-292)||(54320505-54320678)
chr4 (125-294)||(45741972-45742136)
chr4 (210-292)||(37711285-37711367)
chr4 (114-292)||(31348316-31348494)
chr4 (105-290)||(27735807-27735987)
chr4 (105-294)||(41174407-41174591)
chr4 (114-294)||(49735466-49735641)
chr4 (105-292)||(5730830-5731012)
chr4 (224-295)||(1968535-1968606)
chr4 (224-295)||(6938423-6938494)
chr4 (105-174)||(35248748-35248817)
chr4 (114-198)||(36151647-36151729)
chr4 (220-289)||(46007873-46007942)
chr4 (224-296)||(54935063-54935136)
chr4 (224-288)||(27735749-27735813)
chr4 (224-295)||(7977673-7977744)
chr4 (227-294)||(31348500-31348567)
chr4 (209-292)||(37761625-37761708)
chr4 (124-174)||(6891441-6891491)
chr4 (135-284)||(17938115-17938259)
chr4 (124-174)||(47433821-47433871)
chr4 (224-294)||(56135747-56135817)
chr4 (131-199)||(45132591-45132657)
chr4 (243-292)||(49735687-49735736)
chr4 (251-296)||(53260714-53260759)
chr4 (209-290)||(54576329-54576410)
chr4 (220-292)||(26166937-26167009)
chr4 (114-174)||(26167008-26167068)
chr4 (220-292)||(47433881-47433953)
chr4 (105-168)||(37711205-37711268)
chr4 (105-168)||(43961472-43961535)
chr4 (125-168)||(46007820-46007863)
chr4 (224-295)||(54320432-54320502)
chr4 (123-174)||(54494719-54494769)
chr4 (210-292)||(1968351-1968433)
chr4 (105-198)||(1968450-1968541)
chr4 (224-294)||(24565344-24565414)
chr4 (209-294)||(5825057-5825142)
chr4 (225-290)||(47846233-47846298)
chr4 (123-168)||(55510250-55510295)
chr4 (124-199)||(16400881-16400954)
chr4 (209-277)||(21694905-21694973)
chr4 (247-295)||(37711135-37711183)
chr4 (126-174)||(44784075-44784123)
chr4 (225-296)||(21695065-21695136)
chr4 (217-284)||(35248855-35248922)
chr4 (105-168)||(56135811-56135874)
chr4 (221-295)||(2247974-2248048)
chr4 (244-297)||(5731027-5731080)
chr4 (209-297)||(47694344-47694433)
chr4 (114-174)||(2917076-2917136)
chr4 (136-168)||(21695008-21695040)
chr4 (124-183)||(22921062-22921122)
chr4 (124-183)||(22970677-22970737)
chr4 (126-174)||(28332887-28332935)
chr4 (105-168)||(18516590-18516653)
chr4 (220-295)||(29798285-29798360)
chr4 (123-174)||(34995131-34995182)
chr4 (127-174)||(47846168-47846215)
chr4 (34-73)||(54935283-54935322)
chr4 (124-182)||(2247908-2247965)
chr4 (127-181)||(17182591-17182645)
chr4 (223-297)||(22186714-22186788)
chr4 (224-294)||(51329794-51329864)
chr4 (135-168)||(23332653-23332686)
chr4 (139-168)||(41227576-41227605)
chr4 (40-73)||(47433923-47433956)
chr4 (225-290)||(47846440-47846505)
chr4 (210-295)||(55510331-55510415)
chr4 (225-289)||(4437428-4437492)
chr4 (41-73)||(4437628-4437660)
chr4 (212-272)||(6891524-6891584)
chr4 (128-168)||(14539357-14539397)
chr4 (258-294)||(14539486-14539522)
chr4 (248-292)||(17182685-17182729)
chr4 (41-73)||(22920979-22921011)
chr4 (41-73)||(22970788-22970820)
chr4 (224-276)||(24565520-24565572)
chr4 (41-73)||(26166935-26166967)
chr4 (138-174)||(29798379-29798415)
chr4 (209-253)||(29798446-29798490)
chr4 (41-73)||(41174354-41174386)
chr4 (248-292)||(44145773-44145817)
chr4 (224-292)||(45132671-45132739)
chr4 (41-73)||(45741888-45741920)
chr4 (256-296)||(47433714-47433754)
chr4 (41-73)||(49735706-49735738)
chr4 (41-73)||(54320648-54320680)
chr4 (224-292)||(54576505-54576573)
chr4 (260-292)||(56135933-56135965)
[»] chr8 (72 HSPs)
chr8 (105-295)||(31543069-31543254)
chr8 (105-289)||(16653011-16653190)
chr8 (105-292)||(11785588-11785770)
chr8 (210-292)||(31738585-31738667)
chr8 (127-286)||(36308927-36309081)
chr8 (115-294)||(41103502-41103678)
chr8 (105-294)||(40990179-40990366)
chr8 (209-292)||(43732848-43732931)
chr8 (124-288)||(30479721-30479880)
chr8 (105-295)||(9718486-9718661)
chr8 (210-297)||(34634305-34634392)
chr8 (124-284)||(11575415-11575569)
chr8 (209-292)||(3726863-3726946)
chr8 (105-199)||(7503044-7503136)
chr8 (105-257)||(1026884-1027030)
chr8 (209-295)||(30365291-30365377)
chr8 (124-174)||(42650449-42650499)
chr8 (210-277)||(1281305-1281372)
chr8 (224-295)||(8815317-8815388)
chr8 (225-292)||(31543249-31543316)
chr8 (114-199)||(37032450-37032533)
chr8 (209-294)||(16024315-16024399)
chr8 (114-174)||(6315133-6315193)
chr8 (209-292)||(34196470-34196551)
chr8 (210-288)||(10028285-10028363)
chr8 (124-174)||(28083823-28083873)
chr8 (223-288)||(11575581-11575646)
chr8 (224-292)||(12022142-12022211)
chr8 (224-292)||(2248452-2248520)
chr8 (124-199)||(30664442-30664515)
chr8 (225-292)||(7503131-7503198)
chr8 (209-292)||(8815141-8815224)
chr8 (225-292)||(9718656-9718723)
chr8 (127-182)||(10028194-10028249)
chr8 (247-294)||(12022342-12022389)
chr8 (224-294)||(1027024-1027094)
chr8 (224-286)||(1281149-1281211)
chr8 (124-174)||(4247630-4247680)
chr8 (220-290)||(30479889-30479959)
chr8 (114-199)||(33922591-33922674)
chr8 (248-294)||(43732677-43732723)
chr8 (224-293)||(7394637-7394706)
chr8 (105-174)||(7979202-7979271)
chr8 (123-168)||(12022262-12022307)
chr8 (209-294)||(24243048-24243131)
chr8 (127-168)||(35694874-35694915)
chr8 (247-292)||(40632996-40633041)
chr8 (210-262)||(2248614-2248666)
chr8 (252-292)||(2481977-2482017)
chr8 (114-174)||(11033488-11033548)
chr8 (213-289)||(24243212-24243287)
chr8 (224-292)||(30365130-30365198)
chr8 (125-165)||(34633819-34633859)
chr8 (128-168)||(38198168-38198208)
chr8 (219-290)||(28083744-28083815)
chr8 (127-174)||(29358452-29358499)
chr8 (133-168)||(30581929-30581964)
chr8 (118-168)||(27487065-27487115)
chr8 (114-168)||(31738494-31738548)
chr8 (114-168)||(37923197-37923251)
chr8 (220-289)||(37923250-37923320)
chr8 (252-289)||(2412967-2413004)
chr8 (114-167)||(3726975-3727028)
chr8 (249-290)||(16024155-16024196)
chr8 (135-168)||(24243166-24243199)
chr8 (123-168)||(27483640-27483685)
chr8 (128-185)||(42919831-42919888)
chr8 (242-286)||(1281362-1281406)
chr8 (224-288)||(7979144-7979208)
chr8 (39-75)||(11785738-11785774)
chr8 (220-292)||(13404976-13405048)
chr8 (105-168)||(16024215-16024279)
[»] chr7 (73 HSPs)
chr7 (133-294)||(4833529-4833685)
chr7 (105-296)||(47390917-47391104)
chr7 (124-292)||(40196532-40196695)
chr7 (127-289)||(34235010-34235167)
chr7 (114-294)||(25887263-25887438)
chr7 (209-294)||(18231747-18231832)
chr7 (105-292)||(41496957-41497139)
chr7 (105-275)||(1051517-1051680)
chr7 (105-297)||(13770943-13771128)
chr7 (105-252)||(33655148-33655290)
chr7 (112-199)||(34228408-34228493)
chr7 (209-289)||(42306491-42306571)
chr7 (134-295)||(13425117-13425273)
chr7 (209-292)||(33519209-33519292)
chr7 (224-295)||(39856041-39856112)
chr7 (224-292)||(36267553-36267621)
chr7 (209-295)||(30592250-30592336)
chr7 (210-292)||(48881558-48881640)
chr7 (105-174)||(24970278-24970347)
chr7 (118-174)||(22163222-22163278)
chr7 (118-174)||(22221930-22221986)
chr7 (224-294)||(1051674-1051744)
chr7 (209-295)||(10315794-10315880)
chr7 (224-294)||(37925839-37925909)
chr7 (224-295)||(13771122-13771193)
chr7 (224-291)||(31571646-31571713)
chr7 (225-292)||(47390855-47390922)
chr7 (124-174)||(17852952-17853002)
chr7 (226-292)||(40282197-40282263)
chr7 (127-168)||(18063680-18063721)
chr7 (247-292)||(36267752-36267797)
chr7 (225-286)||(37620951-37621012)
chr7 (209-290)||(45940658-45940739)
chr7 (248-292)||(25887192-25887236)
chr7 (113-173)||(26365838-26365898)
chr7 (225-289)||(33655285-33655349)
chr7 (247-294)||(33519046-33519093)
chr7 (105-168)||(33519110-33519173)
chr7 (105-168)||(39855984-39856047)
chr7 (217-296)||(43230404-43230483)
chr7 (220-295)||(48015379-48015454)
chr7 (135-168)||(20393693-20393726)
chr7 (249-294)||(28074101-28074146)
chr7 (127-198)||(41008267-41008334)
chr7 (224-289)||(43230239-43230304)
chr7 (220-292)||(16833870-16833942)
chr7 (225-289)||(26365945-26366009)
chr7 (224-292)||(34228495-34228563)
chr7 (114-174)||(37417746-37417806)
chr7 (123-174)||(35422044-35422095)
chr7 (124-198)||(43230317-43230389)
chr7 (257-296)||(48881758-48881797)
chr7 (260-294)||(17853072-17853106)
chr7 (127-165)||(23116382-23116420)
chr7 (248-290)||(23116428-23116470)
chr7 (246-292)||(31553185-31553230)
chr7 (41-71)||(39646467-39646497)
chr7 (105-167)||(40572354-40572416)
chr7 (224-286)||(41008188-41008250)
chr7 (124-162)||(48152061-48152099)
chr7 (139-168)||(18127361-18127390)
chr7 (247-292)||(28074307-28074352)
chr7 (141-174)||(31571581-31571614)
chr7 (133-166)||(33519416-33519449)
chr7 (249-290)||(37620776-37620817)
chr7 (259-296)||(40572444-40572481)
chr7 (127-168)||(48093977-48094018)
chr7 (126-174)||(7791802-7791850)
chr7 (128-168)||(19261958-19261998)
chr7 (253-289)||(31364249-31364285)
chr7 (37-73)||(36267547-36267583)
chr7 (105-165)||(37620836-37620896)
chr7 (248-292)||(39646469-39646513)
[»] chr1 (62 HSPs)
chr1 (127-292)||(40094933-40095093)
chr1 (105-292)||(2858932-2859114)
chr1 (105-294)||(30010394-30010578)
chr1 (105-292)||(41498466-41498649)
chr1 (113-294)||(8529869-8530045)
chr1 (209-290)||(12234171-12234252)
chr1 (105-294)||(35349464-35349644)
chr1 (114-292)||(38509894-38510067)
chr1 (124-295)||(32951318-32951481)
chr1 (217-289)||(20576136-20576208)
chr1 (133-295)||(50744282-50744435)
chr1 (114-199)||(51597739-51597822)
chr1 (243-295)||(20607412-20607464)
chr1 (224-295)||(12234007-12234078)
chr1 (225-295)||(41498401-41498471)
chr1 (224-297)||(35349638-35349711)
chr1 (124-294)||(7444576-7444741)
chr1 (124-174)||(42230619-42230669)
chr1 (125-174)||(44211018-44211067)
chr1 (209-297)||(2470725-2470813)
chr1 (224-292)||(30010332-30010400)
chr1 (210-294)||(47261433-47261517)
chr1 (225-288)||(35512974-35513037)
chr1 (127-288)||(41676363-41676516)
chr1 (247-293)||(26324013-26324059)
chr1 (124-174)||(26940956-26941006)
chr1 (228-294)||(38510074-38510140)
chr1 (105-198)||(45585776-45585867)
chr1 (114-168)||(49946707-49946761)
chr1 (223-292)||(28770896-28770965)
chr1 (224-292)||(32951494-32951562)
chr1 (124-199)||(36285664-36285737)
chr1 (105-168)||(1085609-1085672)
chr1 (224-295)||(10391869-10391940)
chr1 (225-296)||(35927810-35927881)
chr1 (247-294)||(51303382-51303429)
chr1 (248-294)||(1085487-1085533)
chr1 (220-294)||(40095106-40095180)
chr1 (224-285)||(2859108-2859169)
chr1 (124-288)||(10391953-10392108)
chr1 (123-168)||(33643348-33643393)
chr1 (118-167)||(42742430-42742478)
chr1 (112-181)||(50079490-50079559)
chr1 (253-297)||(1085695-1085739)
chr1 (224-284)||(25268440-25268500)
chr1 (210-294)||(26940842-26940925)
chr1 (224-292)||(40709292-40709360)
chr1 (224-292)||(43551996-43552064)
chr1 (117-168)||(2506613-2506664)
chr1 (105-168)||(12234072-12234135)
chr1 (105-168)||(25268326-25268389)
chr1 (136-167)||(49065548-49065579)
chr1 (105-168)||(51303695-51303757)
chr1 (228-290)||(23536782-23536844)
chr1 (223-292)||(525275-525344)
chr1 (224-289)||(7444481-7444546)
chr1 (40-73)||(26941047-26941080)
chr1 (40-73)||(30010329-30010362)
chr1 (127-168)||(51303503-51303544)
chr1 (227-288)||(51597672-51597733)
chr1 (252-292)||(20607223-20607263)
chr1 (125-165)||(49832629-49832669)
[»] chr5 (68 HSPs)
chr5 (105-290)||(7544198-7544378)
chr5 (114-291)||(13634782-13634954)
chr5 (114-295)||(16938550-16938726)
chr5 (215-289)||(11757070-11757144)
chr5 (124-290)||(26414974-26415136)
chr5 (105-292)||(37606957-37607138)
chr5 (123-292)||(37779183-37779347)
chr5 (209-290)||(1657974-1658055)
chr5 (105-292)||(37551470-37551649)
chr5 (105-292)||(37654300-37654479)
chr5 (124-292)||(10476109-10476272)
chr5 (105-295)||(8502832-8503017)
chr5 (209-292)||(14245207-14245290)
chr5 (209-294)||(14245086-14245171)
chr5 (227-294)||(13634709-13634776)
chr5 (224-294)||(26414891-26414961)
chr5 (114-287)||(36363103-36363271)
chr5 (128-240)||(36392202-36392309)
chr5 (209-292)||(15986624-15986707)
chr5 (224-294)||(7544134-7544204)
chr5 (209-296)||(10650423-10650512)
chr5 (105-174)||(9856942-9857011)
chr5 (114-174)||(2550465-2550525)
chr5 (124-199)||(10072737-10072810)
chr5 (244-292)||(16938479-16938527)
chr5 (229-288)||(2550533-2550592)
chr5 (105-168)||(11756939-11757002)
chr5 (125-264)||(20513473-20513611)
chr5 (225-292)||(33744193-33744260)
chr5 (225-292)||(34980987-34981054)
chr5 (124-289)||(9798615-9798775)
chr5 (127-292)||(28279476-28279636)
chr5 (213-257)||(2550387-2550431)
chr5 (260-296)||(10072653-10072689)
chr5 (219-295)||(11436936-11437012)
chr5 (252-296)||(20147074-20147118)
chr5 (252-292)||(40305670-40305710)
chr5 (209-292)||(2183975-2184058)
chr5 (247-294)||(10204574-10204621)
chr5 (228-295)||(10476023-10476090)
chr5 (224-295)||(36392325-36392396)
chr5 (243-290)||(42681450-42681497)
chr5 (251-289)||(21581150-21581188)
chr5 (224-290)||(34980812-34980878)
chr5 (220-294)||(40815295-40815369)
chr5 (219-292)||(10204747-10204820)
chr5 (123-160)||(10650509-10650546)
chr5 (124-173)||(17024338-17024387)
chr5 (225-294)||(28279654-28279723)
chr5 (249-294)||(40305866-40305911)
chr5 (248-292)||(5688590-5688634)
chr5 (116-168)||(33424921-33424973)
chr5 (105-168)||(4373685-4373748)
chr5 (225-296)||(11419188-11419259)
chr5 (248-295)||(12035933-12035980)
chr5 (247-294)||(15986823-15986870)
chr5 (39-73)||(5688604-5688638)
chr5 (39-73)||(14245260-14245294)
chr5 (221-295)||(14681467-14681540)
chr5 (124-174)||(14681550-14681600)
chr5 (114-168)||(42681524-42681578)
chr5 (123-168)||(10204656-10204701)
chr5 (105-165)||(5688475-5688535)
chr5 (41-73)||(16938477-16938509)
chr5 (243-295)||(22022844-22022896)
chr5 (105-169)||(22022912-22022976)
chr5 (260-292)||(22023571-22023603)
chr5 (114-174)||(40815368-40815427)
[»] chr3 (76 HSPs)
chr3 (124-292)||(24560298-24560461)
chr3 (124-290)||(41110323-41110484)
chr3 (105-286)||(27541937-27542113)
chr3 (128-292)||(41039950-41040109)
chr3 (124-292)||(36568904-36569066)
chr3 (105-182)||(46204948-46205025)
chr3 (224-295)||(25655148-25655219)
chr3 (128-292)||(9312476-9312630)
chr3 (105-292)||(18654600-18654782)
chr3 (209-294)||(34641151-34641236)
chr3 (221-294)||(28581184-28581257)
chr3 (124-295)||(16275702-16275868)
chr3 (124-290)||(52473996-52474157)
chr3 (105-174)||(21773844-21773913)
chr3 (105-292)||(25654971-25655154)
chr3 (209-292)||(24253883-24253966)
chr3 (124-174)||(14898057-14898107)
chr3 (224-294)||(24560215-24560285)
chr3 (224-297)||(28582685-28582758)
chr3 (210-290)||(26135959-26136039)
chr3 (127-296)||(37102155-37102308)
chr3 (243-294)||(5903547-5903598)
chr3 (220-295)||(6803373-6803448)
chr3 (224-295)||(41110497-41110568)
chr3 (225-286)||(10943620-10943681)
chr3 (209-290)||(13082856-13082937)
chr3 (224-292)||(220573-220641)
chr3 (115-183)||(2387864-2387932)
chr3 (248-296)||(8432257-8432305)
chr3 (219-295)||(14898151-14898227)
chr3 (210-290)||(23028088-23028168)
chr3 (105-181)||(26135859-26135935)
chr3 (209-257)||(30200123-30200171)
chr3 (105-168)||(21090190-21090253)
chr3 (248-290)||(42772046-42772088)
chr3 (244-297)||(18654797-18654850)
chr3 (227-292)||(25499074-25499139)
chr3 (224-294)||(30200267-30200341)
chr3 (127-199)||(52185100-52185170)
chr3 (219-288)||(55428550-55428619)
chr3 (252-288)||(31664391-31664427)
chr3 (252-288)||(31931969-31932005)
chr3 (127-183)||(40463975-40464031)
chr3 (105-181)||(42699718-42699794)
chr3 (126-182)||(54574466-54574522)
chr3 (124-296)||(220404-220560)
chr3 (105-164)||(651793-651852)
chr3 (124-167)||(10748417-10748460)
chr3 (123-174)||(10943727-10943778)
chr3 (223-294)||(16883972-16884042)
chr3 (224-295)||(17474382-17474453)
chr3 (251-294)||(24253719-24253762)
chr3 (257-296)||(36727384-36727423)
chr3 (139-174)||(37807176-37807211)
chr3 (105-168)||(40858627-40858690)
chr3 (113-199)||(43005829-43005913)
chr3 (114-165)||(46556214-46556265)
chr3 (105-168)||(48683674-48683737)
chr3 (127-174)||(51819238-51819285)
chr3 (254-288)||(10748299-10748333)
chr3 (224-286)||(10943790-10943852)
chr3 (248-294)||(44412359-44412405)
chr3 (134-168)||(49815512-49815546)
chr3 (123-168)||(16884090-16884135)
chr3 (123-168)||(37237003-37237047)
chr3 (127-168)||(42772116-42772157)
chr3 (127-168)||(44412445-44412486)
chr3 (220-285)||(51819146-51819210)
chr3 (224-296)||(9312650-9312717)
chr3 (225-289)||(27542108-27542172)
chr3 (131-163)||(27956002-27956034)
chr3 (124-156)||(31684367-31684399)
chr3 (41-73)||(34641000-34641032)
chr3 (128-168)||(34641077-34641117)
chr3 (41-73)||(37102353-37102385)
chr3 (247-295)||(41414075-41414123)
[»] chr6 (66 HSPs)
chr6 (114-296)||(30487302-30487478)
chr6 (128-296)||(9721134-9721297)
chr6 (133-296)||(9719027-9719185)
chr6 (105-294)||(33236013-33236196)
chr6 (137-296)||(1300714-1300868)
chr6 (209-291)||(10818377-10818459)
chr6 (225-292)||(14515648-14515715)
chr6 (105-287)||(19278039-19278220)
chr6 (224-294)||(14515471-14515541)
chr6 (220-289)||(31849113-31849182)
chr6 (210-290)||(1390481-1390561)
chr6 (219-295)||(10818226-10818302)
chr6 (124-294)||(21606852-21607007)
chr6 (219-289)||(4097684-4097754)
chr6 (209-291)||(16737997-16738079)
chr6 (225-294)||(665839-665907)
chr6 (250-295)||(9051734-9051779)
chr6 (226-291)||(9719208-9719273)
chr6 (210-290)||(34176497-34176576)
chr6 (134-199)||(4097602-4097665)
chr6 (105-289)||(5585304-5585484)
chr6 (114-199)||(25741478-25741561)
chr6 (126-183)||(2892707-2892764)
chr6 (224-289)||(19278214-19278278)
chr6 (209-292)||(9298647-9298735)
chr6 (114-174)||(12811094-12811153)
chr6 (124-168)||(13583800-13583844)
chr6 (247-295)||(23090992-23091040)
chr6 (114-257)||(31849181-31849319)
chr6 (114-165)||(2893701-2893752)
chr6 (117-168)||(26318379-26318430)
chr6 (262-296)||(4097504-4097538)
chr6 (221-295)||(16738169-16738242)
chr6 (105-183)||(30850016-30850094)
chr6 (258-295)||(1390316-1390353)
chr6 (247-284)||(23091158-23091195)
chr6 (135-168)||(32926737-32926770)
chr6 (220-292)||(12811152-12811224)
chr6 (116-168)||(16738115-16738167)
chr6 (225-289)||(26318482-26318546)
chr6 (209-240)||(12811035-12811066)
chr6 (253-292)||(15323225-15323264)
chr6 (253-292)||(15353364-15353403)
chr6 (39-73)||(1300625-1300659)
chr6 (127-165)||(5381305-5381343)
chr6 (124-158)||(6034201-6034235)
chr6 (226-292)||(9721315-9721381)
chr6 (221-295)||(10293421-10293494)
chr6 (123-165)||(14515551-14515593)
chr6 (134-168)||(16509371-16509405)
chr6 (223-289)||(21607019-21607085)
chr6 (243-289)||(30487500-30487546)
chr6 (125-163)||(33041552-33041590)
chr6 (124-174)||(34176416-34176466)
chr6 (257-294)||(4097233-4097270)
chr6 (124-165)||(25468521-25468562)
chr6 (39-72)||(31798914-31798947)
chr6 (220-289)||(33041473-33041542)
chr6 (123-163)||(382978-383018)
chr6 (220-292)||(666019-666091)
chr6 (209-257)||(2900071-2900118)
chr6 (258-294)||(3841296-3841332)
chr6 (41-73)||(15323223-15323255)
chr6 (41-73)||(15353362-15353394)
chr6 (252-292)||(31799131-31799171)
chr6 (135-183)||(32922437-32922485)
[»] scaffold0262 (1 HSPs)
scaffold0262 (114-294)||(16294-16469)
[»] scaffold0067 (2 HSPs)
scaffold0067 (124-292)||(39186-39353)
scaffold0067 (224-296)||(39366-39438)
[»] scaffold0198 (1 HSPs)
scaffold0198 (209-289)||(3150-3230)
[»] scaffold0171 (1 HSPs)
scaffold0171 (114-294)||(16021-16196)
[»] scaffold0294 (1 HSPs)
scaffold0294 (124-290)||(15344-15504)
[»] scaffold0007 (1 HSPs)
scaffold0007 (209-288)||(242377-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (223-294)||(17715-17784)
[»] scaffold0096 (2 HSPs)
scaffold0096 (220-292)||(6584-6656)
scaffold0096 (133-174)||(6674-6715)
[»] scaffold0026 (2 HSPs)
scaffold0026 (224-289)||(1175-1240)
scaffold0026 (247-295)||(1597-1645)
[»] scaffold0012 (2 HSPs)
scaffold0012 (225-288)||(184784-184847)
scaffold0012 (40-73)||(184608-184641)
[»] scaffold0018 (1 HSPs)
scaffold0018 (116-168)||(69326-69378)
[»] scaffold0071 (1 HSPs)
scaffold0071 (263-297)||(53088-53122)


Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 105 - 661
Target Start/End: Original strand, 40022432 - 40022995
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  40022432 aaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttaaaaa 40022531  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaatactattat 304  Q
        ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |  ||||||    
T  40022532 aa--catttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacacctttagtgttattat 40022629  T
Q  305 cccctcacttattttctccctcagcattctttcttcgacccaacccaacctcccttgtcgttctcattctcggcctcc--tttctccctctacatatgat 402  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||||||| |||||  || |||||||||||||||||    
T  40022630 cccctcacttattttctccctcaacattctttcttcaacccaacccaacctcccttcccgttctcattctcgccctccctttcctccctctacatatgat 40022729  T
Q  403 ctttcacaacccactgtcgttctctaaataacattaccaacatacaatccaacttgaactttcagcccatgcaccttgatattgaacctatcaaa-ctag 501  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  40022730 ctttcacaa-ccattgtcgtcctctaaataacattaccaacatacaatccaacttgaactttcagcccgtgcaccttaatattgaacctatcaaacctag 40022828  T
Q  502 ttggg-tctcccacactga-caaactaaaca-tattcaatgtcttggataacttgaatac-gcacgtaccttacaaaaa-tcataaatccaaaatgtcgc 596  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||| || |    
T  40022829 ttgggttctcccacactgaccaaactaaacattattcaatgtcttggataacttggatacatcacgtaccttacaaaaattcataaatccaaaatttccc 40022928  T
Q  597 tc-tggagttctctaacgagataggaagac-tcaatctagatagcacatacctgcaaggccttcctc 661  Q
    || || | |||||| |||||| | ||| || |||||| ||||| |||||||||  ||| ||||||||    
T  40022929 tcttgcatttctcttacgagacaagaaaacatcaatcaagataccacatacctcgaagcccttcctc 40022995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 114 - 295
Target Start/End: Original strand, 23748166 - 23748342
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  ||||||||  ||||||||| |||||||||||||||||||||| || ||||| ||| |||  ||||||| |||||||         |||||    
T  23748166 actatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcatgtta--atatgttaactttttaaaaga---cattt 23748260  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||| ||| |||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23748261 catagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacacccttaa 23748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 40022331 - 40022395
Alignment:
Q  11 ccgtccttcataacccctccttcattcttcttagggtgtgtttggattgacggtttaggagggta 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40022331 ccgtccttcataacccctccttcattcttcttagggtgtgtttggattgagggtttaggagggta 40022395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 294
Target Start/End: Complemental strand, 31795932 - 31795767
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| || | ||   |||| |||||         | ||||||||||||     
T  31795932 atgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttat---tttattttttaaaaaaa--cttttcatagtgtcc 31795838  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||  |||  |||||||||||||| |||| |||||||||||||||||||||| ||||    
T  31795837 gtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacactctta 31795767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 36347723 - 36347538
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |  ||||||||| ||| |||         
T  36347723 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatataattgtttatcatgt--taatatgttaactatttaaaaa 36347626  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
         || ||||||| || ||||| |||||||||||  | ||| ||| | |||||||||||| |||||||| |||||||||||||||||||    
T  36347625 at---atgtcatagtatccgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaacccttcatccaaacacacccttaa 36347538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 17380007 - 17380088
Alignment:
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||| ||||||||||||||||| | ||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  17380007 catagtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacacccttaa 17380088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 9631652 - 9631807
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaaaa 234  Q
    |||||||| |||||||| ||||||||||||| || ||||| ||| |||  ||||||| |||||||         |||||||| ||||| |||||||||||    
T  9631652 aaataaatcaagtgtgaatgaagtattatattatcgtttatcatgtta--atatgttaactttttaaagga---catttcatggtgtccgtaatttaaaa 9631746  T
Q  235 atgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    | ||||  | |||||||  ||||||| ||||| ||||||||||||||||||||||||||||    
T  9631747 acgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacacccttaa 9631807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 105 - 257
Target Start/End: Complemental strand, 39732910 - 39732764
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||| |  ||||||||| |||||||         
T  39732910 aaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt---at 39732817  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
        ||||||||| |||  |||||||||||||||||  |||||||||||||||    
T  39732816 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 39732764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 19567003 - 19566820
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||||||||||||||||||||||||| ||  ||||| |  ||| ||||||| | |||||||         
T  19567003 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatc--attttaatatgctaacttttt--aaa 19566908  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
        |||||||||||||||||||||||||| ||| |  ||||||||||  || ||| ||||  ||||| |||| ||||||||||||||    
T  19566907 aaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctccattctctttcccttctaaacactccgtccaaacacaccct 19566820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 16565837 - 16565915
Alignment:
Q  105 aaattatgaactatatacaa--tgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    |||||| |||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  16565837 aaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatt 16565915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 35736350 - 35736433
Alignment:
Q  211 tttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| | |||||||||| ||||  | | ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  35736350 tttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccctta 35736433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 36046280 - 36046205
Alignment:
Q  216 tagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    ||||||| |||||||||||||||||  ||||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  36046280 tagtgtccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 139 - 291
Target Start/End: Original strand, 34209560 - 34209707
Alignment:
Q  139 aaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaaaaatga 238  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||  ||||||| |||||||          |||||||||||| ||||||||||||||||    
T  34209560 aaattaagtgtgattgaagtgttatatgattgtttatcatgtta--atatgttaactttttaaaaaat---atttcatagtgtttgtaatttaaaaatga 34209654  T
Q  239 aatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    ||  ||| | || ||||||| |||| |  |||||||| |||||||||||||||    
T  34209655 aaagtaatctcttccctcccctcccattctaaacccttcatccaaacacaccc 34209707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 35736240 - 35736175
Alignment:
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| |||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  35736240 atttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 35736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 8426962 - 8426875
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||||||||  |||||||||||| |||  ||||||||||| |||||||||||| ||||| |||||| |||| ||||| |||||    
T  8426962 catttcatagtgtccttaatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacaccattaat 8426875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 41778835 - 41778898
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||| ||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41778835 aaattatggacagtataaaatgtttttttaaaataaattaagtgtgattgaagtattatatgat 41778898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 7681332 - 7681378
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgttt 173  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  7681332 tttttgtaaaataaattaagtgtgattgaagtattatatgatcgttt 7681378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 15224870 - 15224940
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||  |||||| ||||||||||||||||| ||||||||  |||||||||||||||||    
T  15224870 gtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacaccctta 15224940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 2241472 - 2241541
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| | ||||||||  | |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  2241472 aaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgttta 2241541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 22356175 - 22356248
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| |||||||||||| ||||  | |||||||||||||||||||||| |||| |||| |||||||||||||||    
T  22356175 tgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 115 - 254
Target Start/End: Complemental strand, 15224866 - 15224732
Alignment:
Q  115 ctatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttc 214  Q
    |||||||  |||||||| || |||||||||||||||||||||||||||||||||  |||| ||| |  |||||||||  ||||||         ||||||    
T  15224866 ctatataacatgtttttctagaataaattaagtgtgattgaagtattatatgatcatttatcatgt--taatatgttagcttttt---aaaaaacatttc 15224772  T
Q  215 atagtgtctgtaatttaaaaatgaaatttaaaccctcccc 254  Q
    |||||||| |||||||||||||||||  ||||| ||||||    
T  15224771 atagtgtccgtaatttaaaaatgaaaagtaaacactcccc 15224732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 17379894 - 17379846
Alignment:
Q  244 aaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  17379894 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 17379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 36347717 - 36347785
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  ||||| ||||| |||||||||||| ||||||||| |||||||||||||||    
T  36347717 gtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 36567033 - 36566876
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||||| ||||||  |||||||| || |||||||||| ||||||||||||||||||||||  |||| ||| |  ||||||||| |||||||         
T  36567033 aaattatgaattatataacatgtttttctataataaattaattgtgattgaagtattatatgatcatttatcatgt--taatatgttaactttttataaa 36566936  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctc 266  Q
          ||||||| |||| |||||||||||||||||  |||| |||| | ||||||||||||    
T  36566935 aaac--tttcataatgtccgtaatttaaaaatgaaaagtaaatcctctcatcccttcccctc 36566876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 8427043 - 8427110
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacac 287  Q
    ||||||| |||||||||||||  ||||| |||||||||||| ||||| ||||||||| ||||||||||    
T  8427043 gtctgtactttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 18811413 - 18811468
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattat 183  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  18811413 ttttttaaaataaattaagtgtgattgaaatattatatgattgtttatcatgttat 18811468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 37740051 - 37740004
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  37740051 tttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 37740004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 17379897 - 17379943
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgttta 17379943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 35531832 - 35531898
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||| ||||||||| ||| |||||||||||||||| ||||||| |||| ||| ||||||||||||||    
T  35531832 gtaaattaaaaatggaatctaaaccctcccctcccctcccctcctaaaaccttcatccaaacacacc 35531898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 42813796 - 42813866
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||  ||| || ||||||| ||||||||| |||||||| ||||||||||||||||||    
T  42813796 gtaatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccctta 42813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 12751899 - 12751960
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatat 188  Q
    ||||| |||||||| ||||||||||||||||||||||||||| |||||  ||||||| ||||    
T  12751899 tttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatat 12751960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 16713560 - 16713487
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    ||||||||||||| ||| || |||  |||| |||||||||||||||||||||| ||| ||||||||| ||||||    
T  16713560 gtaatttaaaaattaaaattgaactatcccttcccttcccctcttaaaccctcaatcaaaacacacctttaata 16713487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 8427034 - 8426990
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    
T  8427034 atgtttttctaaaataaattaagtgcgattgaagtattatatgat 8426990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 45257483 - 45257551
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  |||||| || ||||||||||| || |||| ||||||||||||||||||||    
T  45257483 gtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccct 45257551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 886990 - 887041
Alignment:
Q  117 atatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||| |||| |||||||||||| |||||||||||||||||||||||    
T  886990 atataaaatgcttttttaaaataaattatgtgtgattgaagtattatatgat 887041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 41778822 - 41778771
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||||| ||||  ||||||||| |||||||||||||||||    
T  41778822 taaaccctcccctccctttcccttctaaaccctcaatccaaacacaccctta 41778771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 2241579 - 2241665
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||| ||||| |||  ||||||||||||||||  ||||| ||||||| | |||||| | |||||||| |||||||||||| ||||||    
T  2241579 cattccatagcgtccataatttaaaaatgaaaaataaactctccccttctttccccacctaaacccttcatccaaacacatccttaa 2241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 9427053 - 9426987
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||| |||| | |||||||| |||||||||||||| |||||  || |||||||||||||    
T  9427053 gtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacacc 9426987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 36046401 - 36046443
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 39821736 - 39821686
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccct 275  Q
    ||||||||||||||||  ||||||||||||||| || ||||||||||||||    
T  39821736 taatttaaaaatgaaaagtaaaccctcccctccatttccctcttaaaccct 39821686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 41841750 - 41841684
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||| |||| | |||||||||| |||||| ||||| |||| |||| |||||||||||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 7681406 - 7681488
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||| | || | ||||||||||| |||  ||||||||||||  |||||||| ||||||||||| ||||||||| |||||||    
T  7681406 atttcataatatccgcaatttaaaaataaaaagtaaaccctcccc--ccttccccgcttaaaccctcgatccaaacaaaccctta 7681488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 29525896 - 29525855
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  29525896 atgtttttttaaaataaattaaatgtgattgaagtattatat 29525855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 1583238 - 1583286
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
    |||||||||||||| |||||||||||||||||  | |||||||||||||    
T  1583238 catttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 1583286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 2381169 - 2381109
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||| |||| || || ||||||||| |||||||||||||||||  ||||||||||||||    
T  2381169 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatat 2381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 20545799 - 20545835
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgatt 169  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20545799 taaaataaattaaatgtgattgaagtattatatgatt 20545835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 31061530 - 31061598
Alignment:
Q  219 tgtctgtaattt-aaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    |||||||||||| ||||| ||||  |||| |||||||||| |||||||| ||||||||| |||||||||    
T  31061530 tgtctgtaatttaaaaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 35736256 - 35736300
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||    
T  35736256 atgtttttctaaaataaatgaagtgtgactgaagtattatatgat 35736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 42296479 - 42296547
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||  |||  | ||||||| |||||||||||||| ||| ||||| |||||||||||||||    
T  42296479 gtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccct 42296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 45257369 - 45257445
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    |||||| |||| || || ||||||||  |||||||||||||||||  |||||||||||||||||  |||| ||||||    
T  45257369 aaattacgaacaatgtaaaatgttttcttaaaataaattaagtgtttttgaagtattatatgatcatttatcatatt 45257445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 9427147 - 9427230
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| |||||||| ||||||||||||||||| | ||||||| || |   || ||||| | ||||||| |||||||||||||||    
T  9427147 cattttatagtgtccgtaatttaaaaatgaaaatcaaacccttccgttagtttccctcctgaaccctcaatccaaacacaccct 9427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 12541850 - 12541897
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||| |||||||||||||||| |||||||||| |||||||| |||||    
T  12541850 tttttctaaaataaattaagtgcgattgaagtactatatgatcgttta 12541897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 15224188 - 15224153
Alignment:
Q  249 ctcccctcccttcccctcttaaaccctccatccaaa 284  Q
    |||||||||||||||||| |||||||||||||||||    
T  15224188 ctcccctcccttcccctcctaaaccctccatccaaa 15224153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 28262625 - 28262542
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatat 188  Q
    |||||||  ||||||||  |||||||| ||||||||||||  |||||||||| ||||| ||||| ||||| ||| |||| ||||    
T  28262625 aaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattatat 28262542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 34187643 - 34187572
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||| |||  | |||| |||||| |||||| ||| ||||| ||| ||||||||||||||||||    
T  34187643 gtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacacccttaa 34187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 39821831 - 39821878
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
    ||||||||||||| |||||||||||| ||||  |||||||||||||||    
T  39821831 atttcatagtgtccgtaatttaaaaaagaaaactaaaccctcccctcc 39821878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 17379842 - 17379876
Alignment:
Q  39 tcttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||||| ||||||||||||    
T  17379842 tcttagggtgtgtttggattgagggtttaggaggg 17379876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 31928104 - 31928062
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaac 285  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||    
T  31928104 taaactctccccttccttcccctcataaaccctccatccaaac 31928062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 31928224 - 31928286
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaac 285  Q
    |||||||||||||| |||  | | ||||||| |||||||||||| ||||||||| ||||||||    
T  31928224 tgtaatttaaaaattaaaagtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 3094527 - 3094466
Alignment:
Q  113 aactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| || ||||||||| |||||||||||  ||||  |||||||||||||||||| ||||    
T  3094527 aactatgtaaaatgtttttctaaaataaatttcgtgtttttgaagtattatatgattattta 3094466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 6721785 - 6721744
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||||| |||||||||| ||||||||||||| ||||||||    
T  6721785 atgtttttctaaaataaatcaagtgtgattgaaatattatat 6721744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 9427055 - 9427116
Alignment:
Q  113 aactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||||  ||||||||  ||| ||||||| | ||||||||||||||||||| |||||||    
T  9427055 aactatataacatgtttttcaaaactaaattatgcgtgattgaagtattatatgtttgttta 9427116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 17331478 - 17331413
Alignment:
Q  229 ttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||| ||||  ||||||||||||||| |||||||| | |||||||  | ||||||||||||||    
T  17331478 ttaaaaaagaaaagtaaaccctcccctcctttcccctccttaaccctctttgcaaacacaccctta 17331413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 21662372 - 21662328
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||    
T  21662372 aatgttttt-taaaatcaattaagtttgattgaagtattatatgat 21662328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 33265691 - 33265744
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    |||| |||||||||||||||||  |||||||||||||||||  |||| ||||||    
T  33265691 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatatt 33265744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 36347792 - 36347755
Alignment:
Q  36 tcttcttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  36347792 tcttattagggtgtgtttggattgagggtttaggaggg 36347755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 41841772 - 41841813
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||||||||| ||||||| |||||||||||||| ||||    
T  41841772 taaaataaattaagggtgattggagtattatatgatttttta 41841813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 45098249 - 45098294
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||| |||||||||||||||||  |||||||||||||||||    
T  45098249 aatgtatttttaaaataaattaagtgtttttgaagtattatatgat 45098294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 887286 - 887353
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  ||| | |||||||||||||||||| |||| ||| |||||| |||||||||    
T  887286 gtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaa-ccttcatccagacacaccct 887353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 8554451 - 8554495
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||| ||||||||||||||  || |||||||||||||||    
T  8554451 cctcccctccattcccctcttaaactttcaatccaaacacaccct 8554495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 22356027 - 22356087
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||| |||| || || ||||||||| ||||||| |||||||||  ||||||||||||||    
T  22356027 aaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatat 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 31061404 - 31061356
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||| ||| |||||||| |||||| || ||||||||||||||||||    
T  31061404 ccctcccatcctttcccctcctaaaccttcaatccaaacacacccttaa 31061356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 35736173 - 35736205
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  35736173 ttagggtgtgtttggattgagggtttaggaggg 35736205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 39732904 - 39732972
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  |||| | |||| | ||||||||||| ||||| || |||||||||||||||    
T  39732904 gtaatttaaaaacgaaaagtaaatcatccctttccttcccctctcaaaccttcaatccaaacacaccct 39732972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 39821750 - 39821790
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattata 164  Q
    |||||||| |||||||||||||||| |||| ||||||||||    
T  39821750 atgtttttctaaaataaattaagtgcgatttaagtattata 39821790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 40022410 - 40022363
Alignment:
Q  244 aaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  40022410 aaaccctcccc-cccttaccctcctaaaccctcaatccaaacacaccct 40022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 42316909 - 42316877
Alignment:
Q  142 ttaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||||||||||||||||||||| |||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgttta 42316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 45257351 - 45257303
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||| ||| |||||||| ||||| ||| |||||||||||||||||||    
T  45257351 cctcccttcctttcccctcctaaactctcaatccaaacacacccttaat 45257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 4e-43; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 54935130 - 54935313
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtatt-atatgattgtttaacatattataatatgtttactttttnnnn 203  Q
    |||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||  ||||| | |||||||        
T  54935130 aaattacgaactatataacatgtttttctaaaataaattaagtgtgattgaagtatttatatgatcgtttatcatatta--atatgataactttttaaaa 54935227  T
Q  204 nnnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
         |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54935228 ta---catttcatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 114 - 292
Target Start/End: Original strand, 54320505 - 54320678
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||| | |||||||         | |||    
T  54320505 actatatatcatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgtta--atatgctaactttttaaaaaa---cgttt 54320599  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| ||||||||||||| ||| | ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  54320600 catagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 125 - 294
Target Start/End: Original strand, 45741972 - 45742136
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctg 224  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         |||||||||||||| |    
T  45741972 tgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttaaaaaa---catttcatagtgtccg 45742066  T
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||||||  ||||| |||||||||||| ||| | |||||||| ||||||||||||||||||    
T  45742067 taatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacaccctta 45742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 37711285 - 37711367
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 114 - 292
Target Start/End: Complemental strand, 31348494 - 31348316
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||||| ||||||||||| ||||||||||||||||| ||| |||  |||||||  ||||||         |||||    
T  31348494 actatataacatgtttttctaaaataaattatgtgtgattgaattattatatgattgtttatcatgtta--atatgttagctttttaaaaaa---cattt 31348400  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctc-----ttaaaccctccatccaaacacaccct 292  Q
    ||||||||| |||||||||||||||||  |||||||| |||||||||||||||      |||||||||||||||||||||||||    
T  31348399 catagtgtccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaactaaaccctccatccaaacacaccct 31348316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 105 - 290
Target Start/End: Original strand, 27735807 - 27735987
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||||||||||||||||||||  |||| ||| |||  ||||| | ||| |||         
T  27735807 aaattacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta--atatgctaactctttaaaaa 27735904  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
        ||||| |||||||| |||||||||||||||||  | ||||||  |||||||||||||| |||||||||||||||||||||||    
T  27735905 a---cattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 105 - 294
Target Start/End: Original strand, 41174407 - 41174591
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||| || ||||||||| ||||||||||||  ||||  || |||  ||||| | |||||||         
T  41174407 aaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgtta--atatgctaactttttaaaaa 41174504  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
        ||||||||||||||  ||| ||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  41174505 c---catttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacaccctta 41174591  T

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Target: chr4; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 49735641 - 49735466
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||| ||||||||| ||| |||||||| || ||||| ||| |||  ||| ||| |||||||         |||||    
T  49735641 actatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgtta--ataggttaactttttaaaaga---cattt 49735547  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||  |||| |||||||||||||||||  | |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  49735546 catgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 49735466  T

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Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 5731012 - 5730830
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||| | ||||||||||||||||| ||||||||||||||||||  |||| ||| |||  ||||||| ||| ||          
T  5731012 aaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgtta--atatgttaactcttcaaaaa 5730915  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
         |||| |||| ||| |||||||||||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||||||    
T  5730914 at---attttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccct 5730830  T

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Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 1968535 - 1968606
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||||| |||||| || ||||||||||||||| ||||||||| ||||||||||||||||||    
T  1968535 gtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacacccttaa 1968606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 6938423 - 6938494
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||||  | ||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  6938423 gtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacacccttaa 6938494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 35248748 - 35248817
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  35248748 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattattta 35248817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 36151647 - 36151729
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttt 198  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| |  ||||||||| ||||||    
T  36151647 actatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgt--taatatgttaactttt 36151729  T

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Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 46007873 - 46007942
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||| |||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  46007873 gtctgcaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 54935136 - 54935063
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccc-tcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||| ||||  |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  54935136 gtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacccttaat 54935063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 27735813 - 27735749
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||||||| |||||||||| | |||||||||||| ||||||||| |||||||||||    
T  27735813 gtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 7977673 - 7977744
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||  ||| || ||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  7977673 gtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatccaaacacacccttaa 7977744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 31348500 - 31348567
Alignment:
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||| ||||  |||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccctta 31348567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 37761625 - 37761708
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| ||||  ||||||||||| ||||   || ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  37761625 catttcataatgtccataatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccct 37761708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 6891441 - 6891491
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  6891441 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 6891491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 284
Target Start/End: Complemental strand, 17938259 - 17938115
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaaaa 234  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||  ||| || | |||||         |||| |||| ||||  ||||||||||    
T  17938259 aaataaattaagtgtgattgaagtattatatgatcgtttatcatgttat--tattttaaattttt---aaaaaacattccataatgtccataatttaaaa 17938165  T
Q  235 atgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaa 284  Q
    | |||| |||||| || |||||| |||||||| |||||||||||||||||    
T  17938164 acgaaaattaaactcttccctccattcccctcctaaaccctccatccaaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 47433871 - 47433821
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  47433871 atgtttttttaaaataaattaagtgtgattgaagtattatatgatcgttta 47433821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 56135817 - 56135747
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||  |||  | |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  56135817 gtaatttaaaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 56135747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 45132657 - 45132591
Alignment:
Q  131 tgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  ||| ||||||||| |||||||    
T  45132657 tgtaaaataaattaagtgtgattgaagtattatatgatcgtttatc--attttaatatgttaacttttt 45132591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 49735687 - 49735736
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  49735687 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 53260759 - 53260714
Alignment:
Q  251 cccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacacccttaat 53260714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 54576410 - 54576329
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||| ||| |||| ||||| |||||| ||||  ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  54576410 cattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 26167009 - 26166937
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||| ||||   |||| ||||||||| |||||||| ||||||||| |||||||||||||||    
T  26167009 gtctgtaatttaaaaaagaaaaacaaactctcccctccattcccctcctaaaccctcaatccaaacacaccct 26166937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 26167008 - 26167068
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  26167008 actatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgatcgttta 26167068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 47433881 - 47433953
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||| ||||  |||||||||| ||||||||||||| |||||| || | |||||||||||||    
T  47433881 gtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacaccct 47433953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 37711205 - 37711268
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| | ||||||||  |||||| | ||||||||||||||||||||||||||||||||||||    
T  37711205 aaattacggactatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgat 37711268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 43961472 - 43961535
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||| || || ||||||||| |||||||||||||||||  |||||||||||||||||    
T  43961472 aaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgat 43961535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 46007863 - 46007820
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  46007863 tgtttttgtaaaataaattaagtgagattgaagtattatatgat 46007820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 54320502 - 54320432
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||| |||| | |||||||||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  54320502 gtaatttaaaaaagaaaatcaaaccctccc-tccctttccctcctaaaccctcaatccaaacacacccttaa 54320432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 54494719 - 54494769
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  54494719 aatgttttt-taaaataagttaagtgtgattgaagtattatatgattgttta 54494769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 1968433 - 1968351
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||  |||||||| | |||||  |||||||||||||||||| |||||| |||||||  |||||||| ||||||    
T  1968433 atttcatagtgtccataatttaatattgaaaagtaaaccctcccctccctttccctctcaaacccttaatccaaacgcaccct 1968351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 1968541 - 1968450
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttt 198  Q
    |||||| | ||||||||  |||||||| |||||||||| | ||||||||||||||||||||||| ||||| ||| |  ||||||||| ||||||    
T  1968541 aaattacggactatataatatgtttttctaaaataaatcaggtgtgattgaagtattatatgatcgtttatcatgt--taatatgttaactttt 1968450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 24565414 - 24565344
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||||  ||||||||||||   |||||| || |||||| ||||||||||||||||||||    
T  24565414 gtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacaccctta 24565344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 5825057 - 5825142
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| ||| ||||||||||| ||||| ||||  |||| |||| || | ||||| ||| |||||||||||||||||||||||||||    
T  5825057 cattttataatgtctgtaattcaaaaaagaaaagtaaatcctctccccacttcctctcctaaaccctccatccaaacacaccctta 5825142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 47846233 - 47846298
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||  |||  ||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  47846233 taatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 55510250 - 55510295
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  55510250 aatgtttttttaaaataaattaagtgtgactgaagtattatatgat 55510295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 16400881 - 16400954
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    |||||||| ||||||||||||| | |||||||||||||||||||| ||||| ||| |  ||||||||| |||||||    
T  16400881 atgtttttctaaaataaattaattatgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt 16400954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 21694973 - 21694905
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctcc 277  Q
    ||||| |||||||| |||||||||||| ||||  ||| ||||||| |||||||||||| ||||||||||    
T  21694973 cattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccctcc 21694905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 37711183 - 37711135
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  37711183 ccctcccttcccttcccctcctaaaccctcaatccaaacacacccttaa 37711135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 44784075 - 44784123
Alignment:
Q  126 gtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  44784075 gtttttctaaagtaaattaagtgtgattgaagtattatatgatcgttta 44784123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 21695065 - 21695136
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||||  ||||  |||||||||| || |||||||||| ||||||| | |||||||||||||||||||    
T  21695065 taatttaaaatagaaaagtaaaccctccgcttccttcccctcataaacccccaatccaaacacacccttaat 21695136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 35248855 - 35248922
Alignment:
Q  217 agtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaa 284  Q
    ||||||  |||||||||| |||||  ||||||||||||||||| || ||| |||||||||||||||||    
T  35248855 agtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 56135811 - 56135874
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| |||| || || ||||||||| |||||||||||||||||  |||||||||||||||||    
T  56135811 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgat 56135874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 2247974 - 2248048
Alignment:
Q  221 tctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||| ||||  ||||| ||||| || |||| |||| ||||||||| ||||||||||||| ||||    
T  2247974 tctgtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacaccattaa 2248048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 5731027 - 5731080
Alignment:
Q  244 aaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||| |||||||||||||||||| ||||||||| || ||||||||| |||||||    
T  5731027 aaactctcccctcccttcccctcctaaaccctcaattcaaacacactcttaata 5731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 47694433 - 47694344
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatt-taaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||||||||||||| |||||||||||  ||||   ||| |||||||||||||||| |||  ||| |||||||||||||| ||||| ||||    
T  47694433 catttcatagtgtccgtaatttaaaagagaaaaagtaagccctcccctcccttccgctccaaaatcctccatccaaacataccctaaata 47694344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 2917136 - 2917076
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  ||| |||| ||||||||||| | |||||||||||||||||||||| |||||    
T  2917136 actatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgttta 2917076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 21695040 - 21695008
Alignment:
Q  136 aataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||||||||||||||||||||||||||||    
T  21695040 aataaattaagtgtgattgaagtattatatgat 21695008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 22921062 - 22921122
Alignment:
Q  124 atgtttttgtaaaataaattaa-gtgtgattgaagtattatatgattgtttaacatattat 183  Q
    |||||||| || ||||||| || ||||||||||||||||||||||| ||||| ||||||||    
T  22921062 atgtttttctagaataaatcaaagtgtgattgaagtattatatgatcgtttatcatattat 22921122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 22970737 - 22970677
Alignment:
Q  124 atgtttttgtaaaataaattaa-gtgtgattgaagtattatatgattgtttaacatattat 183  Q
    |||||||| || ||||||| || ||||||||||||||||||||||| ||||| ||||||||    
T  22970737 atgtttttctagaataaatcaaagtgtgattgaagtattatatgatcgtttatcatattat 22970677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 28332887 - 28332935
Alignment:
Q  126 gtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| |||| |||||||||| |||||||||||||||||||| |||||    
T  28332887 gtttttctaaagtaaattaagtatgattgaagtattatatgatcgttta 28332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 18516653 - 18516590
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||||||  |||| |||||||||  ||||| |||||||||||||||||| ||||| ||||    
T  18516653 aaattatgaacactataaaatgtttttaaaaaatgaattaagtgtgattgaagcattatgtgat 18516590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 29798360 - 29798285
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||||  |||  |||||  ||| ||| ||||||||| |||||| || ||||||||||||||||||    
T  29798360 gtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctcctaaaccatcaatccaaacacacccttaa 29798285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 34995131 - 34995182
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||| |||||||||||||||||  ||||||||||||| |||| ||||    
T  34995131 aatgtttttctaaaataaattaagtgtttttgaagtattataagattattta 34995182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 47846215 - 47846168
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||| |||||||||||||||||  |||||||||||||||||| ||||    
T  47846215 tttttttaaaataaattaagtgtttttgaagtattatatgattattta 47846168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 54935322 - 54935283
Alignment:
Q  34 attcttcttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  54935322 attcttcttagggtgtgtttggatggagggtttaggaggg 54935283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 2247965 - 2247908
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatta 182  Q
    |||||||| ||||| |||| | |||||||||||||||||||| |||||||| |||||||    
T  2247965 atgtttttctaaaaaaaat-atgtgtgattgaagtattatataattgtttatcatatta 2247908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 17182645 - 17182591
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    ||||| |||||||||||||||||  |||||||||||||||||  |||| ||||||    
T  17182645 tttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatatt 17182591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 22186788 - 22186714
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||||||||||||| |||  | ||| || |||||||||||| || ||||||||| ||||||| ||||||| ||||    
T  22186788 tgtaatttaaaaattaaaagtgaactctgccctcccttcccttcctaaaccctcaatccaaatacaccctaaata 22186714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 51329864 - 51329794
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||| ||| || ||| |||| ||  ||||||||| ||||| ||| |||||||||||||||||    
T  51329864 gtaatttaaaaattaaaattgaactctcctctttcttcccctcctaaactctcaatccaaacacaccctta 51329794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 23332686 - 23332653
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||||||||||||| |||||||||||||||    
T  23332686 aaataaattaagtgtgatagaagtattatatgat 23332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 41227576 - 41227605
Alignment:
Q  139 aaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||||||||||||||||||||||    
T  41227576 aaattaagtgtgattgaagtattatatgat 41227605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 47433956 - 47433923
Alignment:
Q  40 cttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||| |||||||||||||||||    
T  47433956 cttagggtgtgtttgggttgacggtttaggaggg 47433923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 47846440 - 47846505
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||  |||  |||||| |||  ||||||| |||||||||||||| |||||||||||||    
T  47846440 taatttaaaaaataaaagtaaaccttcctttcccttctcctcttaaaccctcaatccaaacacacc 47846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 55510331 - 55510415
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||| |||||||  ||||||||||||| ||| | |||||||| | |  ||| ||||||||||| |||||||||||||| |||||||    
T  55510331 attttatagtgttcgtaatttaaaaataaaagt-aaaccctcacatttctttccctcttaaactctccatccaaacacgcccttaa 55510415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 4437492 - 4437428
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||| ||||  |||  | ||||||||||| || || ||||||||||||||||||||||    
T  4437492 taatttaaaaaagaaaaataagtcatcccctccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 4437660 - 4437628
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  4437660 ttagggtgtgtttggattgaaggtttaggaggg 4437628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 6891524 - 6891584
Alignment:
Q  212 ttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaac 272  Q
    |||||||||||  ||||||||||| |||| | |||| |||||||| ||||||||| |||||    
T  6891524 ttcatagtgtccataatttaaaaacgaaaatcaaactctcccctctcttcccctcctaaac 6891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 14539357 - 14539397
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  14539357 ttttttaaaataaattaagtgtttttgaagtattatatgat 14539397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 14539486 - 14539522
Alignment:
Q  258 cttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  14539486 cttcccctcttaaaccctcaatccaaacacaacctta 14539522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 17182685 - 17182729
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||| ||| |||||||| ||||||||| |||||||||||||||    
T  17182685 cctcccttcctttcccctcataaaccctcaatccaaacacaccct 17182729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 22920979 - 22921011
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  22920979 ttagggtgtgtttggattgatggtttaggaggg 22921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 22970820 - 22970788
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  22970820 ttagggtgtgtttggattgatggtttaggaggg 22970788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 24565520 - 24565572
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctc 276  Q
    |||||||||||| ||||| ||||  || ||||||||||||||| |||||||||    
T  24565520 gtaatttaaaaaagaaatgtaaattcttccctcccttcccctcctaaaccctc 24565572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 26166935 - 26166967
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  26166935 ttagggtgtgtttggattgagggtttaggaggg 26166967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 29798379 - 29798415
Alignment:
Q  138 taaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  29798379 taaatcaagtgtgattgaagtattatatgatcgttta 29798415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 29798446 - 29798490
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctccc 253  Q
    |||||||||||||| |||||||||||||||||  | |||||||||    
T  29798446 catttcatagtgtccgtaatttaaaaatgaaaactgaaccctccc 29798490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 41174354 - 41174386
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  41174354 ttagggtgtgtttggattgagggtttaggaggg 41174386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 44145817 - 44145773
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||||||| |||||| |  |||||||||||||||    
T  44145817 cctcccctcccttcccctcctaaaccttgaatccaaacacaccct 44145773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 45132671 - 45132739
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  |||||| || |||| ||||||||| ||||| ||| || ||||||||||||    
T  45132671 gtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacaccct 45132739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 45741888 - 45741920
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  45741888 ttagggtgtgtttggattgagggtttaggaggg 45741920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 47433754 - 47433714
Alignment:
Q  256 cccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  47433754 cccttcccctcctaaaccctccatctaaacgcacccttaat 47433714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 49735738 - 49735706
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggaggg 49735706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 54320680 - 54320648
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  54320680 ttagggtgtgtttggattgagggtttaggaggg 54320648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 54576505 - 54576573
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||| |||  | ||| || | ||||||||| ||||||||||||  |||||||||||||||    
T  54576505 gtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatccaaacacaccct 54576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 56135933 - 56135965
Alignment:
Q  260 tcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||| |||||||||||||||||||||||||    
T  56135933 tcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 31543254 - 31543069
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||| || |||||  |||||||| |||||||||||||||||||||||||||||||||||  |||||  || |||  ||||||| |||||||         
T  31543254 aaattatggaccatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgaccgtttatgatgtta--atatgttaacttttttaaaa 31543157  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
        ||||||||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31543156 a---catttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatccaaacatacccttaa 31543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 105 - 289
Target Start/End: Original strand, 16653011 - 16653190
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||| ||||||||||||||||||||||||| |||||   | |||  ||||||| |||||||         
T  16653011 aaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgtta--atatgttaactttttcaaaa 16653108  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
        ||||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||||||    
T  16653109 a---catttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatccaaacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 11785588 - 11785770
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||||||||||||  |||||||| ||||||| ||||| || ||||||||||||||||| ||||||| ||| |||  ||||| | |||||||         
T  11785588 aaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcatgtta--atatgctaactttttaaaaa 11785685  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
         |||||||| |||| ||||||||||||||||| | |||||||||| || ||| ||||| |||||||||||||||||||||||||    
T  11785686 at---atttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatccaaacacaccct 11785770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 31738585 - 31738667
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  31738585 attttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccct 31738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 127 - 286
Target Start/End: Original strand, 36308927 - 36309081
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgta 226  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||           |||||| | |||  |||    
T  36308927 tttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgtta--atatgtttacttttaaaaatat---atttcacaatgtacgta 36309021  T
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    ||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  36309022 atttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 115 - 294
Target Start/End: Complemental strand, 41103678 - 41103502
Alignment:
Q  115 ctatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttc 214  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||||  |   |||| |||||         | ||||    
T  41103678 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattgt---tttaatttttttaaaaa--cgtttc 41103584  T
Q  215 atagtgtctgtaattt--aaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||  ||||||  ||||| |||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  41103583 atagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccctccatccaaacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 105 - 294
Target Start/End: Complemental strand, 40990366 - 40990179
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||| | ||||||||||||||| |||||||||||||||||||| | ||| ||| |||  ||||||| ||| |||         
T  40990366 aaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgcttatcatgtta--atatgttaactctttaaaaa 40990269  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaa-tgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
        ||||||||||||||| ||| ||||||| |||||| ||||||||||||||| |||  |||  ||||||||||||||||||||||||||    
T  40990268 aaa-catttcatagtgtctataaattaaaaaatgaaatataaaccctcccctcctttcttctcccaaaccctccatccaaacacaccctta 40990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 43732848 - 43732931
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| |||| |||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43732848 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 288
Target Start/End: Complemental strand, 30479880 - 30479721
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||  |||| ||  |||  ||||||| |||||||         |||||||||||||||    
T  30479880 atgtttttctaaaataaatcaagtgtgattgaagtattatattatcatttatcacctta--atatgttaactttttaaaaga---catttcatagtgtct 30479786  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    |||||||||||||||||  | ||| ||||||||| | |||||| |||| ||||||||||||||||    
T  30479785 gtaatttaaaaatgaaaagtgaactctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 9718661 - 9718486
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||||||||||||  || ||||| ||||||  ||||| |||||||||||||||||||||||||||| ||| |  ||||||| | |||||||         
T  9718661 aaattatgaactatataacatatttttctaaaattcattaattgtgattgaagtattatatgattgtttatcatgt--taatatgctaacttttt---aa 9718567  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
        |||||||||||||| ||||||||||||||||| |  |||||||||||||          ||||||||||||||||||||||||||||    
T  9718566 aaaccatttcatagtgtccgtaatttaaaaatgaaaatcgaaccctcccctcc----------taaaccctccatccaaacacacccttaa 9718486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 34634305 - 34634392
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    ||||||||||||| ||||||||||||| |||  | ||||||| | |||||||||||| ||||| ||||||||||||||||||||||||    
T  34634305 atttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatccaaacacacccttaata 34634392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 284
Target Start/End: Complemental strand, 11575569 - 11575415
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| |  ||||||||| |||||||         ||||||||||| ||     
T  11575569 atgtttttctaaaataaattaagtgtgattaaagtattatatgatcgtttatcatgt--taatatgttaacttttt---aaaaaacatttcatagtatcc 11575475  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaa 284  Q
     |||||||| |||||||  |||||||| ||||||||||| ||| |||| ||||||||||||    
T  11575474 ttaatttaagaatgaaaagtaaaccct-ccctcccttcctctcctaaatcctccatccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 3726946 - 3726863
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| ||| ||||| |||||||||||||||||  |||||| |||  |||||||||||| |||||||||||||||||||||||||    
T  3726946 cattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccct 3726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 7503136 - 7503044
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    |||||||| | ||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| |  ||||||||| |||||||    
T  7503136 aaattatggattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgattgtttatcatgt--taatatgttaacttttt 7503044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 105 - 257
Target Start/End: Complemental strand, 1027030 - 1026884
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||| |  ||||||||| ||||||          
T  1027030 aaattacggactatata-aatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgt--taatatgttaactttt---gat 1026937  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
         ||||||||||||| | |||||||||||||||  |||||||||||||||    
T  1026936 aaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaaccctcccctcc 1026884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 30365291 - 30365377
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||| ||||||||||||||||| ||||   || |||||||||||||| ||||  |||| |||||||||||||||||||||||    
T  30365291 catttcataatgtctgtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacacccttaa 30365377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 42650499 - 42650449
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42650499 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgttta 42650449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 1281305 - 1281372
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctcc 277  Q
    ||||||||||||| |||||||||||||||||  |||| |||||||||||||||  |||||||||||||    
T  1281305 atttcatagtgtccgtaatttaaaaatgaaaactaaatcctcccctcccttcctatcttaaaccctcc 1281372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 8815317 - 8815388
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||| |||  | ||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  8815317 gtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacacccttaa 8815388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 31543249 - 31543316
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 37032450 - 37032533
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||  |||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| |  ||||||||| |||||||    
T  37032450 actatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatct--taatatgttaacttttt 37032533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 16024315 - 16024399
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| ||| |||| |||||||||||| ||||  ||||| |||||||||||||||||| |||| ||||||||||||||||| ||||    
T  16024315 cattttataatgtccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacactctta 16024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 6315133 - 6315193
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  6315133 actatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgttta 6315193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 34196470 - 34196551
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| ||||||||||||||||| ||||  ||| |||||||| ||||||||||| |||||||||||||||||| ||||||    
T  34196470 cattttataatgtctgtaatttaaaaa-gaaaagtaagccctcccc-cccttcccctcctaaaccctccatccaaacgcaccct 34196551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 10028285 - 10028363
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||| ||||||||||| | |||  |||||||||||||| ||||| ||| |||||||||  ||||||||||    
T  10028285 atttcatagtgtccgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaaccctctgtccaaacaca 10028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 28083823 - 28083873
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  28083823 atgtttctctaaaataaattaagtgtgattggagtattatatgattgttta 28083873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 11575581 - 11575646
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||||||||  ||||||||||||||||||| | || ||||||||  |||||||||||    
T  11575581 tgtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 12022211 - 12022142
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccc-tcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  ||| |||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  12022211 gtaatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacacaccct 12022142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 2248520 - 2248452
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| | || || ||| |||||||||||||||||| ||||| ||| |||||||||||||||    
T  2248520 gtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccct 2248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 30664442 - 30664515
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||  |||||||||||||||||||||||||||||||| |  ||||| |||||  ||||||||| |||||||    
T  30664442 atgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatat--taatatgttaacttttt 30664515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 7503131 - 7503198
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||  |||||||||||||||| |||||||  ||| |||| |||||||||||||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccct 7503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 8815224 - 8815141
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| |||| |||||||||||| ||||  |||  | || |||| ||||||||| |||||||||||||||||||||||||    
T  8815224 cattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacaccct 8815141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 9718656 - 9718723
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||  |||||  |||||||||||| |||| ||||||||| |||||||||||||||    
T  9718656 taatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 10028194 - 10028249
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatta 182  Q
    ||||| |||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  10028194 tttttttaaaataaattaagtgtggttgaagtcttatatgatcgtttaccatatta 10028249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 12022342 - 12022389
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  12022342 ccctcccctcctttcccctcctaaaccctcaatccaaacacaccctta 12022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 1027024 - 1027094
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||  | |||||| |||||||||||| || ||||||||  |||||||||||||||||    
T  1027024 gtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccctta 1027094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 1281211 - 1281149
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    |||||||||||| ||||  ||||||||| | |||||||||||| ||||||||| |||||||||    
T  1281211 gtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 4247680 - 4247630
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||| |||||    
T  4247680 atgtttttttaaaataaattaagtatgatttaagtattatatgatcgttta 4247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 30479889 - 30479959
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||| |||||||| ||||  |||||||||| |||| |||| ||| ||||||||| |||||||||||||    
T  30479889 gtctgtagtttaaaaaagaaaactaaaccctccgctccattcctctcataaaccctcaatccaaacacacc 30479959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 33922591 - 33922674
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||  || ||||| ||||||||||| ||| |||||||||||| ||||||||||||| |  || |||||||||| |||||||    
T  33922591 actatataacatatttttttaaaataaatttagtatgattgaagtatgatatgattgtttatc--atgataatatgttaacttttt 33922674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 43732723 - 43732677
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  43732723 cctcctctcccttcccctcctaaaccctcaatccaaacacaccctta 43732677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 7394637 - 7394706
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctt 293  Q
    ||||||||||||  |||  | |||| ||||||||||||||||| ||||||||| ||||||||||| ||||    
T  7394637 gtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacacatcctt 7394706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 7979202 - 7979271
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| | ||||||||  |||||||| |||||||||| |||||  ||||||||||||||||||| ||||    
T  7979202 aaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtattatatgattattta 7979271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 12022307 - 12022262
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||    
T  12022307 aatgtttttttaaaataaattaagtgtttttgaagtattatatgat 12022262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 24243131 - 24243048
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| |||||||| ||||||| |||||||||  |||  | |||| ||||||||| |||||||| |||||||||||||||||||||    
T  24243131 cattttatagtgtc-gtaatttcaaaatgaaaagtaagtcatcccttcccttccc-tcttaaactctccatccaaacacaccctta 24243048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 35694915 - 35694874
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgat 35694874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 40633041 - 40632996
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  40633041 ccctcctctcccttcccctcctaaaccctccattcaaacacaccct 40632996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 2248614 - 2248666
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcc 262  Q
    ||||||||||||| ||||||||||||| |||  | ||||||||||||||||||    
T  2248614 atttcatagtgtccgtaatttaaaaataaaaagtgaaccctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 2481977 - 2482017
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  2481977 ccctcccttcccctcctaaaccctccatccaaacataccct 2482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 11033488 - 11033548
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||||| |||||||||||| |||||||||||  |||||||||| |||||    
T  11033488 actatatatcatgtttttctaaaataaattatgtgtgattgaataattatatgatcgttta 11033548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 24243212 - 24243287
Alignment:
Q  213 tcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||| ||||||||||||| ||| | ||  ||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  24243212 tcatattgtctgtaatttagaaaaggaaagtaagccctcccctccattcccc-cttaaaccctcgatccaaacacac 24243287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 30365198 - 30365130
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||| |||  | ||| ||||||||| ||| |||| ||||||||| |||||||||||||||    
T  30365198 gtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccct 30365130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 34633819 - 34633859
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattatat 34633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 38198208 - 38198168
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  38198208 ttttttaaaatgaattaagtgtgattgaagtattatatgat 38198168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 28083815 - 28083744
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||||||| ||||   |||  ||| |||||||||||||| ||||||||| |||| ||||||||    
T  28083815 tgtctgtaatttaaaaaagaaaaacaaaatctctcctcccttcccctcctaaaccctcaatccgaacacacc 28083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 29358499 - 29358452
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||| || ||||||||||||||||||||||||||||| ||| |||||    
T  29358499 tttttctagaataaattaagtgtgattgaagtattataggatcgttta 29358452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 30581964 - 30581929
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||||||||||||||||||||||||||||||    
T  30581964 taaaacaaattaagtgtgattgaagtattatatgat 30581929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 27487065 - 27487115
Alignment:
Q  118 tatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||| ||||||||| |||||  |||||||||| ||||||||||||||||||    
T  27487065 tataaaatgtttttctaaaaccaattaagtgttattgaagtattatatgat 27487115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 31738494 - 31738548
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||  |||||| | || |||||||||||||| ||||||||||||||||||    
T  31738494 actatataacatgtttctctagaataaattaagtgtaattgaagtattatatgat 31738548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 37923251 - 37923197
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||  |||||||| |||||||||||||||| |||| || |||||||||||    
T  37923251 actatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgat 37923197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 37923250 - 37923320
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttccc-ctcttaaaccctccatccaaacacac 289  Q
    ||||||||||||||||| ||  ||||||||| || ||||||||| ||| ||||||||  ||||||||||||    
T  37923250 gtctgtaatttaaaaataaatattaaacccttccatcccttccctctcctaaacccttaatccaaacacac 37923320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 2413004 - 2412967
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  2413004 ccctcccctcccctcctaaaccctccatccaaacacac 2412967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 3727028 - 3726975
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatga 167  Q
    ||||||||  |||||||| ||||||||||||||  |||||||| ||||||||||    
T  3727028 actatataacatgtttttctaaaataaattaagcatgattgaaatattatatga 3726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 16024196 - 16024155
Alignment:
Q  249 ctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  16024196 ctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 24243199 - 24243166
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgat 168  Q
    |||| |||||||||||||||||||||||||||||    
T  24243199 aaattaattaagtgtgattgaagtattatatgat 24243166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 27483640 - 27483685
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||| | |||||||| |||||| ||||||||||||||||||    
T  27483640 aatgttttttttaaataaataaagtgttattgaagtattatatgat 27483685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 42919888 - 42919831
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataa 185  Q
    |||| ||||||||||||| | | ||||||||||| ||||||| |||| ||||||||||    
T  42919888 ttttttaaaataaattaaatataattgaagtattttatgattatttatcatattataa 42919831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 1281362 - 1281406
Alignment:
Q  242 ttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    |||||||||||||| |||||   ||||||||||||||||||||||    
T  1281362 ttaaaccctccccttccttcttatcttaaaccctccatccaaaca 1281406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 7979208 - 7979144
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    |||||||||||| ||||  ||||| |||| ||||||||| ||  ||||||||| |||||||||||    
T  7979208 gtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaacaca 7979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 11785774 - 11785738
Alignment:
Q  39 tcttagggtgtgtttggattgacggtttaggagggta 75  Q
    ||||||||||||||||||| || ||||||||||||||    
T  11785774 tcttagggtgtgtttggatggagggtttaggagggta 11785738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 13405048 - 13404976
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||| ||||||||| ||||  |||   ||||| |||||||||||| ||||||||| |||||| ||||||||    
T  13405048 gtctgttatttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaaccacaccct 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 16024215 - 16024279
Alignment:
Q  105 aaattatgaactatatacaatg-tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| |||| ||||| |||| ||||| | |||||||||||||||  |||||||||||||||||    
T  16024215 aaattacgaacaatataaaatgattttttttaaataaattaagtgtttttgaagtattatatgat 16024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 133 - 294
Target Start/End: Complemental strand, 4833685 - 4833529
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaa 232  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||| |||  ||| ||| |||||||         ||||||||||||||||||||||||    
T  4833685 taaaataaattaaatgtgatttaagtattatatgattgtttatcatgtta--ataggttaactttttataaaa---catttcatagtgtctgtaatttaa 4833591  T
Q  233 aaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  4833590 aaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacataccctta 4833529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 105 - 296
Target Start/End: Original strand, 47390917 - 47391104
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatga-ttgtttaacatattataatatgtttactttttnnnn 203  Q
    |||||||||||||||||  |||||||| ||||||| ||||| ||||||||||||||||||||| ||||||| ||| |||  ||||||| || ||||        
T  47390917 aaattatgaactatataacatgtttttctaaaatacattaattgtgattgaagtattatatgacttgtttatcatgtta--atatgttaacattttaaaa 47391014  T
Q  204 nnnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
           ||| |||||||| |||||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47391015 aatg---ttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 47391104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 40196695 - 40196532
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||   ||||||| |||||||         ||||| ||||||||     
T  40196695 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttg--atatgttaactttttataaaa---cattttatagtgtcc 40196601  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||| ||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  40196600 gtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccct 40196532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 127 - 289
Target Start/End: Complemental strand, 34235167 - 34235010
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgta 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||         |||||||||||||| |||    
T  34235167 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatat--taatatgttaacttttt---ataaaacatttcatagtgtccgta 34235073  T
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||||||  ||||  |||||||| | ||||  || |||||||||||||||||||||    
T  34235072 atttaaaaatgaaaagtaaattctcccctctcgtccctactcaaaccctccatccaaacacac 34235010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 25887263 - 25887438
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||| ||||||          |||||    
T  25887263 actatataacatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatat--taatatgttaactttt--aaaaaaaacattt 25887358  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||  | |  |||||||||||||||||| ||||| |||||||||||||||||| |||||||| || |||||||||||||||    
T  25887359 catgattttcgtaatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaacccttca-ccaaacacaccctta 25887438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 18231747 - 18231832
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  18231747 catttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctccatccaaacacaccctta 18231832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 41497139 - 41496957
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||||||||| ||||||||||  |||| ||| |||  ||||||| | |||||         
T  41497139 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatcatgtta--atatgttaaatttttaaaaa 41497042  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
        |||||| || |||| ||||||||||||| |||  |||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  41497041 a---catttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacaccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 105 - 275
Target Start/End: Complemental strand, 1051680 - 1051517
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| ||||||||||   ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||   | ||||||||| |||||||         
T  1051680 aaattacgaactatataacctgtttttctaaaataaattaagtgtgattgaagcattatatgattgtttatca---tgtaatatgttaacttttt---aa 1051587  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccct 275  Q
        |||||||| ||||| |||||||||||||||||| | ||||||||||||  |||||||| ||||||||    
T  1051586 aaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaaccctcccctctattcccctcctaaaccct 1051517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 13771128 - 13770943
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||||||||||||||  ||| |||||| |||||||| ||| |||  ||||||| |||||||         
T  13771128 aaattacggactatataacatgtttttttaaaataaattaagtgtgattcgagtgttatatcattgtttatcatgtta--atatgttaactttttataat 13771031  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
         |||| |||||||| ||||||||||||| | |  |||| ||||||||||||||||||| |||| |||| ||||||||||||||| ||||    
T  13771030 -----attttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaata 13770943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 105 - 252
Target Start/End: Complemental strand, 33655290 - 33655148
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    ||||||||  |||||||  |||||||| ||||||||||||||||||||||||||||||||||||  |||| ||| |  ||||||||| |||||||         
T  33655290 aaattatgggctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcatttatcatgt--taatatgttaacttttt---aa 33655196  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcc 252  Q
        |||||||||||||| |||||||||||||||||  ||||||||||    
T  33655195 aaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 34228493 - 34228408
Alignment:
Q  112 gaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||  ||||||||| |||||||    
T  34228493 gaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgcttatcatat--taatatgttaacttttt 34228408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 42306491 - 42306571
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||||||  |||||||| ||||||||| ||||||||||||    
T  42306491 catttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 134 - 295
Target Start/End: Complemental strand, 13425273 - 13425117
Alignment:
Q  134 aaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaaa 233  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||| |||  ||||||| ||||||           ||||  ||||||||||||||||||    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgtta--atatgttgacttttgaaaaaat---attttgtagtgtctgtaatttaaa 13425179  T
Q  234 aatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||| |||  |||||| ||| || |||||||||| ||||||||| ||||||||||||||||||    
T  13425178 aataaaaaataaaccatcctcttccttcccctcctaaaccctctatccaaacacacccttaa 13425117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 33519209 - 33519292
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| ||||||||||||||| | ||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  33519209 cattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccct 33519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 39856041 - 39856112
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39856041 gtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttaa 39856112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 36267621 - 36267553
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  36267621 gtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 30592336 - 30592250
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||| ||||||||||||||||||||| ||||  ||| ||||||| |||||| ||||| |||| |||||||||||| ||||||||||    
T  30592336 cattttatagtgtctgtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaatcctccatccaaatacacccttaa 30592250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 48881640 - 48881558
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| ||| |||| |||||||||||| ||||  ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  48881640 attttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 24970347 - 24970278
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| | ||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  24970347 aaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 24970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 22163278 - 22163222
Alignment:
Q  118 tatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  22163278 tatataatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 22163222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 22221986 - 22221930
Alignment:
Q  118 tatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  22221986 tatataatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 22221930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 1051674 - 1051744
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||  |||| |||| |||||||||||||| ||||||||| |||||||||||||||||    
T  1051674 gtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccctta 1051744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 10315794 - 10315880
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||| ||| |||||||||||||  |||| |  || ||||||||||||| |||||| ||||||||||||| |||||||    
T  10315794 catttcatagtgtccgtattttaaaaatgaaaaataaatcaccctctcccttcccctcctaaaccttccatccaaacacgcccttaa 10315880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 37925909 - 37925839
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||  |||  | |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  37925909 gtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 37925839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 13771122 - 13771193
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||| ||||  ||||| ||| |||||||||||||| ||||||||| ||| ||||||||||||||    
T  13771122 gtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacacccttaa 13771193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 31571646 - 31571713
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    |||||||||||| ||||  ||||| |||||||| ||||||||| ||||||||| ||||||||||||||    
T  31571646 gtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 47390922 - 47390855
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||  |||||||||| ||||||||||||| ||| ||||| |||||||||||||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 17852952 - 17853002
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  17852952 atgtttttctaaaataaattaagtgtgattgaggtattatatgatcgttta 17853002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 40282263 - 40282197
Alignment:
Q  226 aatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||| |||| | ||||||||| ||||||||||||| ||||||||| ||||||||| |||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccct 40282197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 18063721 - 18063680
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgat 18063680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 36267752 - 36267797
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||    
T  36267752 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 37620951 - 37621012
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    ||||||||||| ||||   |||||||||||||||||||| ||| ||||||||||||||||||    
T  37620951 taatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccctccatccaaaca 37621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 45940739 - 45940658
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||||| ||||| ||||||| |||  |||||  | ||||||||||||||  |||||| ||||||||||||||||    
T  45940739 catttcatagtgtccgtaatataaaaataaaaagtaaactttgccctcccttccccttctaaaccttccatccaaacacacc 45940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 25887236 - 25887192
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacaccct 25887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 26365838 - 26365898
Alignment:
Q  113 aactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttt 173  Q
    |||||||||  || ||||| ||||||||| || ||||||||||||||||||||||||||||    
T  26365838 aactatataacatatttttctaaaataaactaggtgtgattgaagtattatatgattgttt 26365898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 33655285 - 33655349
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||| ||||  ||||||||| |||| ||||||||| ||||||||| ||||||||||||    
T  33655285 taatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 33519093 - 33519046
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  33519093 ccctcccctcccttcccctcctaaaacctccatccaaacactccctta 33519046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 33519110 - 33519173
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| |||| ||||| ||||||||| | |||||||||||||||  |||||||||||||||||    
T  33519110 aaattacgaacaatataaaatgtttttttgaaataaattaagtgtttttgaagtattatatgat 33519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 39856047 - 39855984
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||| | ||||||||||||||    
T  39856047 aaattacggactatataacatgtttttctaaaataaattaagtgtgacttaagtattatatgat 39855984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 43230404 - 43230483
Alignment:
Q  217 agtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||| ||||||||||||| |||  ||||| ||||||| | |||| ||| |||||||| ||||||||||||| ||||||    
T  43230404 agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccctacatccaaacacacacttaat 43230483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 48015379 - 48015454
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||| ||||  ||| | |||  ||||||||||||| ||| ||||||||||||||| ||||||||    
T  48015379 gtctgtaatttaaaaacgaaaagtaagctctcatctcccttcccctcctaatccctccatccaaacaaacccttaa 48015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 20393693 - 20393726
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||||||||||||||||||||||||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgat 20393726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 28074146 - 28074101
Alignment:
Q  249 ctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||||| |||||| || |||||||||||||||||    
T  28074146 ctcccctcccttcccctcctaaaccttcaatccaaacacaccctta 28074101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 41008267 - 41008334
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttt 198  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||| ||| |  ||||||||| ||||||    
T  41008267 tttttttaaaataaattaagtgtgattgaag--ttatatgattgtttatcatgt--taatatgttaactttt 41008334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 43230304 - 43230239
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||| ||||  ||||||||||||| |||| | ||||||||||| | ||||||||||||    
T  43230304 gtaatttaaaaaagaaaagtaaaccctccccttcctttctctcttaaacccccaatccaaacacac 43230239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 16833870 - 16833942
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| |||| ||||  |||  |||| ||| ||||||||||||||| ||| ||||||||||||||||    
T  16833870 gtctgtaattttaaaaagaaaagtaactcctctccttccttcccctcttaaatcctgcatccaaacacaccct 16833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 26365945 - 26366009
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||| |||| | ||||  ||||||| |||||| ||||||||||||| |||||||||||    
T  26365945 taatttaaaaacgaaaatcaaactatcccctctcttcccatcttaaaccctccgtccaaacacac 26366009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 34228495 - 34228563
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||| |||||||||  |||| |||||||||||||| |||| |||||| || || ||||||||||||    
T  34228495 gtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacaccct 34228563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 37417806 - 37417746
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  ||||||||  ||| ||| ||||||||||||||||||||||||||| |||||    
T  37417806 actatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgttta 37417746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 35422044 - 35422095
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||| ||||    
T  35422044 aatgtttttttaaaataaattaagtgtttttgaagtatcatatgattattta 35422095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 43230317 - 43230389
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttt 198  Q
    |||||||| |||||||||||||||| |||||||| |||||| ||| ||||| ||| |  ||||||||| ||||||    
T  43230317 atgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgt--taatatgttaactttt 43230389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 48881758 - 48881797
Alignment:
Q  257 ccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacacccttaat 48881797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 17853072 - 17853106
Alignment:
Q  260 tcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||| |||||||||||||||||||||||||||    
T  17853072 tcccctcctaaaccctccatccaaacacaccctta 17853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 23116420 - 23116382
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatat 23116382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 23116428 - 23116470
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  23116428 cctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 31553230 - 31553185
Alignment:
Q  246 accctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  31553230 accctctcctcccttcccctcctaaacc-tccatccaaacacaccct 31553185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 71
Target Start/End: Original strand, 39646467 - 39646497
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggag 71  Q
    |||||||||||||||||||||||||||||||    
T  39646467 ttagggtgtgtttggattgacggtttaggag 39646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 40572416 - 40572354
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatga 167  Q
    |||||| | ||||||||  |||||| | |||||||||||||| |||||| |||||||||||||    
T  40572416 aaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatga 40572354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 41008250 - 41008188
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    |||||||||||| ||||   |||  ||||||||||||||||||| |||||||| |||||||||    
T  41008250 gtaatttaaaaaagaaaaacaaattctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 48152061 - 48152099
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtatta 162  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  48152061 atgtttttctaaaataaatttagtgtgattgaagtatta 48152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 18127390 - 18127361
Alignment:
Q  139 aaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||||||||||||||||||||||    
T  18127390 aaattaagtgtgattgaagtattatatgat 18127361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 28074307 - 28074352
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| |||||| ||| ||||||||| |||||||||||||||    
T  28074307 ccctccccttccttcctctcctaaaccctcaatccaaacacaccct 28074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 31571614 - 31571581
Alignment:
Q  141 attaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||||||||||||||||||| ||||||||    
T  31571614 attaagtgtgattgaagtattatataattgttta 31571581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 33519449 - 33519416
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatg 166  Q
    |||||| |||||||||||||||||||||||||||    
T  33519449 taaaattaattaagtgtgattgaagtattatatg 33519416  T

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Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 37620817 - 37620776
Alignment:
Q  249 ctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||||||||  |||||||| |||||||||||||    
T  37620817 ctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

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Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 40572444 - 40572481
Alignment:
Q  259 ttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  40572444 ttcccctcttaaaccctcaatccaaacacaccattaat 40572481  T

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Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 48093977 - 48094018
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||||||||||||||||| || ||||||||||||||    
T  48093977 tttttttaaaataaattaagtgtggttaaagtattatatgat 48094018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 7791802 - 7791850
Alignment:
Q  126 gtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| ||| ||||||||| ||||||| ||||||||||||||| ||||    
T  7791802 gtttttttaacataaattaaatgtgatttaagtattatatgattattta 7791850  T

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Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 19261998 - 19261958
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||||||||||| ||||||||||||| ||||||||    
T  19261998 ttttgaaaaataaattaattgtgattgaagtactatatgat 19261958  T

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Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 31364249 - 31364285
Alignment:
Q  253 cctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  31364249 cctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 36267547 - 36267583
Alignment:
Q  37 cttcttagggtgtgtttggattgacggtttaggaggg 73  Q
    ||||||||||||||||||||| || ||||||||||||    
T  36267547 cttcttagggtgtgtttggatggagggtttaggaggg 36267583  T

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Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 37620836 - 37620896
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||||||||| || || |||| |||| ||||||||||||| |||  ||||||||||||||    
T  37620836 aaattatgaacaatgtaaaatgattttttaaaataaattaaatgtttttgaagtattatat 37620896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 39646513 - 39646469
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||| ||| |||||| || |||||||||||||||    
T  39646513 cctcccctcccttcctctcctaaaccgtcaatccaaacacaccct 39646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 40095093 - 40094933
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgta 226  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||  || |||| |||||||         |||||||||||||| |||    
T  40095093 tttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta--atttgttaactttttataaaa---catttcatagtgtccgta 40094999  T
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  40094998 atttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccct 40094933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 2859114 - 2858932
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataa-tatgtttactttttnnnn 203  Q
    |||||| | ||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||   || | ||| |||||| |||||||        
T  2859114 aaattacggactatataacatgtttttcaaaaataaattaagtgtgattgaagtattatatgattgttta---taatgtaagtatgttaactttttaaat 2859018  T
Q  204 nnnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
         |||||||||| |||||||||||| ||||||||  |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  2859017 aa---catttcatagggtctgtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacaccct 2858932  T

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Target: chr1; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 105 - 294
Target Start/End: Original strand, 30010394 - 30010578
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||||||||||| ||||||||||||||||| |||||  || |||  ||||||| ||| |||         
T  30010394 aaattacggactatataacatgtttttctaaaataaattaagtgtggttgaagtattatatgatcgtttataatgtta--atatgttaactatttaaaaa 30010491  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
        |||||| ||||||| ||||||| |||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  30010492 a---catttcgtagtgtccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccctta 30010578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 41498466 - 41498649
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||||||||| ||  ||| |||| ||  |||| ||||||||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         
T  41498466 aaattatgaactatttaacatgattttctacgataagttaagtgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttataaa 41498563  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctccctt-cccctcttaaaccctccatccaaacacaccct 292  Q
        |||||||||||||| |||||||||||||||||  |||| ||||||||||||| |||||| ||||| |||||||||||||||||||    
T  41498564 a---catttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactctccatccaaacacaccct 41498649  T

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Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 113 - 294
Target Start/End: Original strand, 8529869 - 8530045
Alignment:
Q  113 aactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatt 212  Q
    |||||||||  |||||||| | |||||||||||||||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||          |||    
T  8529869 aactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccatgtta--atatgttaactttttaaaaaat---att 8529963  T
Q  213 tcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||| |||||||||||||||||  |||||  || |||||||||||||| ||||| || |||||||||||| |||||    
T  8529964 tcatagtgtccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactcttcatccaaacacatcctta 8530045  T

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Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 12234171 - 12234252
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  12234171 catttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 105 - 294
Target Start/End: Complemental strand, 35349644 - 35349464
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  || ||||| ||||||||| |||| || |||||||||||||||||||||||| ||| |||  ||||||| |||||||         
T  35349644 aaattacggactatataacatttttttctaaaataaactaagggttattgaagtattatatgattgtttatcatgtta--atatgttaactttttataaa 35349547  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
        |||||||  ||||| |||||||||||||||||  |||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  35349546 a---catttca--gtgtccgtaatttaaaaatgaaaagtaaaccctccccccc--tcccctcttaaaccctccatccaaacacaccctta 35349464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 114 - 292
Target Start/End: Complemental strand, 38510067 - 38509894
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||| |||||||||||||||||||||| || ||||| | | |||  | ||||| | |||||         |||||    
T  38510067 actatataacatgtttttctaaaataaatcaagtgtgattgaagtattatattatcgtttatcgtgtta--agatgttaattttttaaaaga---cattt 38509973  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| |||||||||||||||||  | |||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  38509972 catagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 124 - 295
Target Start/End: Complemental strand, 32951481 - 32951318
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||| |  ||||||||| |||||||         |||||||| |||||     
T  32951481 atgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcatgt--taatatgttaacttttt---ataaaacatttcattgtgtcc 32951387  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||||  || ||   |||||||||||||||||| |  ||| |||||||||||||||||||    
T  32951386 gtaatttaaaaatgaaaagtatac---cccctcccttcccctcttgagtccttcatccaaacacacccttaa 32951318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 20576208 - 20576136
Alignment:
Q  217 agtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  20576208 agtgtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 50744435 - 50744282
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaa 232  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||| |  ||||||||| ||| |||         |||||||||||||| |||||||||    
T  50744435 taaaataaattaagtgtgattgaagtattatatgatcgtttatcatgt--taatatgttaactcttt--aaaaaaacatttcatagtgtccgtaatttaa 50744340  T
Q  233 aaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||| ||||      ||||| |||||||| |||| |||||||||||||| ||||||||    
T  50744339 aaatgaaatctaaa-----tcctccattcccctcataaatcctccatccaaacatacccttaa 50744282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 51597739 - 51597822
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |  ||||||||| |||||||    
T  51597739 actatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgattgtttatcatct--taatatgttaacttttt 51597822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 20607412 - 20607464
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20607412 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacccttaa 20607464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 12234078 - 12234007
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||| |||| |||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  12234078 gtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacacccttaa 12234007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 41498471 - 41498401
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||| ||||  |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacacccttaa 41498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 35349638 - 35349711
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||||||||||| ||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  35349638 gtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaata 35349711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 294
Target Start/End: Original strand, 7444576 - 7444741
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||| ||||  ||||||||||||||||||||||||| |||||  || |||  ||||||| |||||||         ||||| ||||||||     
T  7444576 atgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgtta--atatgttaactttttaaaaat---cattttatagtgtcc 7444670  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||| |||||||||  |||||||||||||| |||||| |  ||||| || ||||||||||||| ||||    
T  7444671 gtaattttaaaatgaaaactaaaccctcccctctcttccctttctaaactcttcatccaaacacactctta 7444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 42230619 - 42230669
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  42230619 atgttttttaaaaataaattaagtgtgattgaagtattatatgattgttta 42230669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 44211067 - 44211018
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  44211067 tgtttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 44211018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 2470813 - 2470725
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    ||||| |||||||  |||||||||||||| ||   |||||||||  || ||||||||| ||||||||||||||||||||||||| ||||    
T  2470813 cattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccctaaata 2470725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 30010400 - 30010332
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||| | ||||  |||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  30010400 gtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 30010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 47261433 - 47261517
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||| |||||||| ||| |||||||| |||| ||||||||| ||||| ||||||||  |||| || |||||||||||||||||||    
T  47261433 attttatagtgtccgtactttaaaaaagaaaattaaaccctaccctctcttccccttctaaatcccccatccaaacacaccctta 47261517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    |||||||||||  |||  ||| |||||||||||||||||||| |||||||||||||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 41676363 - 41676516
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgta 226  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||| ||| |  ||||||| ||| |||           ||||| |||||||| |||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgt--taatatg-ttaatttaaaaaaaaaaacattttatagtgtccgta 41676459  T
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||||  |||||||||||||| |||||     ||||||||| |||||||||||    
T  41676460 atttaaaaatgaaaagtaaaccctcccctctcttcc-----taaaccctcgatccaaacaca 41676516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 26324059 - 26324013
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccctt 293  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctt 26324013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 26941006 - 26940956
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  26941006 atgtttttctaaaataaatcaagtgtgattgaagtattatatgactgttta 26940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 38510074 - 38510140
Alignment:
Q  228 tttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||| ||||  |||||||||||||||||||||||| ||||||||  |||||||||||| ||||    
T  38510074 tttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacactctta 38510140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 45585867 - 45585776
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttt 198  Q
    |||||| | ||||||||  |||||||| |||||||||||||||||||| |||||| |||||||| ||||| ||| |  ||||||||| ||||||    
T  45585867 aaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgt--taatatgttaactttt 45585776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 49946761 - 49946707
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||    
T  49946761 actatataacatgtttttttaaaataaattaaatgtgattgaagtattatatgat 49946707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 28770896 - 28770965
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||| |||  |||||||||| |||| || ||||| |||||| ||||||||||||||||||    
T  28770896 tgtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttccatccaaacacaccct 28770965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 32951494 - 32951562
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  ||||| |||||||||||||| ||| ||||| ||| |||||||||||||||    
T  32951494 gtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccct 32951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 36285737 - 36285664
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    |||||||| ||||||| || ||||||||||||||||||||||||| ||||| ||| |  ||||||||| |||||||    
T  36285737 atgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt 36285664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 1085672 - 1085609
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| |||| || || ||||||||| |||||||||||||||||  |||||||||||||||||    
T  1085672 aaattacgaaccatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgat 1085609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 10391940 - 10391869
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||||  ||||||||||||||  |||||||| |||| |||| |||||||  |||||||||    
T  10391940 gtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaaacctcaatccaaattcacccttaa 10391869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 35927881 - 35927810
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||  |||| | | ||||||||||| |||||||| |||| |||| |||||||||||||||||||    
T  35927881 taatttaaaaaataaatgtgagccctcccctccattcccctcctaaaacctcaatccaaacacacccttaat 35927810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 51303429 - 51303382
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  51303429 ccctcccctcccctcccctcctaaaccctcaatccaaacacaccctta 51303382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 1085533 - 1085487
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||    
T  1085533 cctcccctccatccccctcctaaaccctccatccaaacacaccctta 1085487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 40095106 - 40095180
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||| ||||  |||||||| || ||||||  |||  ||||||||| |||||||||||||||||    
T  40095106 gtctgtaatttaaaaacgaaaagtaaacccttccttcccttttccttctaaaccctcaatccaaacacaccctta 40095180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 2859108 - 2859169
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaac 285  Q
    ||||||||||||  |||  |||||||||||||||||||||||| |||||| || ||||||||    
T  2859108 gtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 10391953 - 10392108
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||  ||||| ||| |  ||||||||| |||||||         ||||| ||| ||| |    
T  10391953 atgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcatgt--taatatgttaacttttt--aaaaaaacatttaataatgttt 10392048  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    |||||||||||| ||||  ||||| ||| ||     ||||||| |||||||||||||||||||||    
T  10392049 gtaatttaaaaacgaaaagtaaactctctcc-----tcccctcctaaaccctccatccaaacaca 10392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 33643348 - 33643393
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||    
T  33643348 aatgtttttttaaaataaattaagtgtttttgaagtattatatgat 33643393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 42742478 - 42742430
Alignment:
Q  118 tatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatga 167  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  42742478 tataaaatgttttt-taaaataaattaagtgtgattgaagtactatatga 42742430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 50079559 - 50079490
Alignment:
Q  112 gaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    |||| ||||| ||||||||| |||||||||||||||||  || ||||||||||||||  |||| ||||||    
T  50079559 gaacaatataaaatgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcatatt 50079490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 1085695 - 1085739
Alignment:
Q  253 cctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||    
T  1085695 cctcccttcccctcctaaaccctctatccaaacacaccctaaata 1085739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 25268440 - 25268500
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaa 284  Q
    |||||||||||| | ||  |||||||||||||| ||||||||  |||||||||||||||||    
T  25268440 gtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaa 25268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 26940925 - 26940842
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||| |||||||||||| |||  | ||||||||| || ||| | ||||||||||||| || ||||||||| ||||    
T  26940925 atttcatagtgtctataatttaaaaataaaaagtgaaccctcccatctctt-cactcttaaaccctcaattcaaacacactctta 26940842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 40709360 - 40709292
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  |||  ||||| |||||||||||||||||||| |  |||||||||||||||    
T  40709360 gtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccct 40709292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 43552064 - 43551996
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||||  ||||||||| | ||| ||| || | |||||| ||||||||||||||||||    
T  43552064 gtaatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaaccttccatccaaacacaccct 43551996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 2506613 - 2506664
Alignment:
Q  117 atatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||||||||  ||||||||||||||||  |||||||||||||||||    
T  2506613 atataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgat 2506664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 12234072 - 12234135
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| | ||||||||  |||||||| |||||||||| |||||||||||| |||| |||||||    
T  12234072 aaattacggactatataacatgtttttctaaaataaatcaagtgtgattgatgtataatatgat 12234135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 25268326 - 25268389
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||||| || || ||||| ||| |||||||||||||||||  |||||||||||||||||    
T  25268326 aaattttgaacaatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgat 25268389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 167
Target Start/End: Original strand, 49065548 - 49065579
Alignment:
Q  136 aataaattaagtgtgattgaagtattatatga 167  Q
    ||||||||||||||||||||||||||||||||    
T  49065548 aataaattaagtgtgattgaagtattatatga 49065579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 51303757 - 51303695
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||||||  |||| ||||||||| |||| | ||||||||||||||||| |||||||||||    
T  51303757 aaattatgaacactataaaatgtttttttaaa-tcaattaagtgtgattgaactattatatgat 51303695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 23536844 - 23536782
Alignment:
Q  228 tttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||  |||| |||||| ||||| ||||||| |||| |||| ||||||||||||||||||    
T  23536844 tttaaaatagaaaattaaacactcccatcccttctcctcctaaatcctccatccaaacacacc 23536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 525275 - 525344
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||| |||  | ||| || || ||||||||| || ||||||||| |||||||||||||||    
T  525275 tgtaatttaaaaattaaaagtgaactcttccttcccttcccgtcctaaaccctcaatccaaacacaccct 525344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 7444546 - 7444481
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||| ||||  ||||||||||| ||||||| ||||  |||||||| |||| |||||||    
T  7444546 gtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 26941080 - 26941047
Alignment:
Q  40 cttagggtgtgtttggattgacggtttaggaggg 73  Q
    ||||||||||||||||||||| ||||||||||||    
T  26941080 cttagggtgtgtttggattgagggtttaggaggg 26941047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 30010329 - 30010362
Alignment:
Q  40 cttagggtgtgtttggattgacggtttaggaggg 73  Q
    ||||||||||||||||||||| ||||||||||||    
T  30010329 cttagggtgtgtttggattgagggtttaggaggg 30010362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 51303544 - 51303503
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  51303544 tttttttaaaataaattaagtgtttttgaagtattatatgat 51303503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 51597733 - 51597672
Alignment:
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||| ||||  ||||| ||||||||||||||  || ||||||||| |||||||||||    
T  51597733 atttaaaaaagaaaagtaaactctcccctcccttcctttcataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 20607263 - 20607223
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||| ||||||||| || ||||||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacaccct 20607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 49832629 - 49832669
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||||  |||||||| |||||||||||||||||||||||    
T  49832629 tgttttttaaaaataaaataagtgtgattgaagtattatat 49832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 105 - 290
Target Start/End: Original strand, 7544198 - 7544378
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||  || |||  ||||| | |||||||         
T  7544198 aaattacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgattgtttattatgtta--atatgctaactttttaaaaa 7544295  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
        |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||| |||||||||||||||||||||||    
T  7544296 a---catttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccctccatccaaacacacc 7544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 114 - 291
Target Start/End: Original strand, 13634782 - 13634954
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||||| ||||||||||| ||||||||||| ||||| ||| |||  ||||||| |||||||         |||||    
T  13634782 actatataacatgtttttctaaaataaattatgtgtgattgaattattatatgatcgtttatcatgtta--atatgttaactttttaaaaaa---cattt 13634876  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    ||||||||  |||||||||||||||||  ||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  13634877 catagtgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 114 - 295
Target Start/End: Original strand, 16938550 - 16938726
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||| | |||||||||||||||||||||||| |||||||||||  |||| ||| |||  | ||||| ||| |||         |||||    
T  16938550 actatataacatgtttctctaaaataaattaagtgtgattgaaatattatatgatcatttatcatgtta--acatgttaactctttaaaaaa---cattt 16938644  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  16938645 catagtgtcagtaatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccctccatccaaacacacccttaa 16938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 11757070 - 11757144
Alignment:
Q  215 atagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11757070 atagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 26414974 - 26415136
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| ||||||| |||||||||||||||||||||||||| | ||||| ||| |||  ||||||| |||||||         |||||||||||||||    
T  26414974 atgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcatgtta--atatgttaactttttataaaa---catttcatagtgtct 26415068  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctccctt-cccctcttaaaccctccatccaaacacacc 290  Q
    |||| ||||||||||||  ||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  26415069 gtaacttaaaaatgaaaagtaaactctcccctcctttccccctcataaaccctccatccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 37606957 - 37607138
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | |||||||| ||||||||| ||||||||||||  |||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         
T  37606957 aaattaaggactatata-aatgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttataaa 37607053  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
        ||||||||||| |||||| |||||||||||||  |||||| ||  ||||||| ||||| |||||||||||||||||||||||||    
T  37607054 a---catttcatagtatctgtattttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatccaaacacaccct 37607138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 123 - 292
Target Start/End: Original strand, 37779183 - 37779347
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtc 222  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         ||||||||||| ||    
T  37779183 aatgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttataaaa---catttcatagtatc 37779277  T
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| |||||||||||||  |||||| ||  ||||||| ||||| |||||||||||||||||||||||||    
T  37779278 tgtagtttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatccaaacacaccct 37779347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 1657974 - 1658055
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  1657974 cattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 37551470 - 37551649
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||| |||||||| || ||||||  ||||||||||| ||||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         
T  37551470 aaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttataaa 37551566  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
        |||||||  ||||||||| |||||||||||||  |||||| ||| ||||||| ||||| |||||||||||||||||||||||||    
T  37551567 a---catttca--gtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccct 37551649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 37654300 - 37654479
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||| |||||||| || ||||||  ||||||||||| ||||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         
T  37654300 aaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttataaa 37654396  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
        |||||||  ||||||||| |||||||||||||  |||||| ||| ||||||| ||||| |||||||||||||||||||||||||    
T  37654397 a---catttca--gtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccct 37654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 10476109 - 10476272
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||||| ||| |||  ||||||||  |||||          |||||||||||       
T  10476109 atgtttttctaaaataaattaagtgtgattgaagtattatataatcgtttatcatctta--atatgtttttttttttataaat---atttcatagtggtc 10476203  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||| | |  ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  10476204 gtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 8503017 - 8502832
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  ||| |||| ||||||||||||||||||||||||||||||| | ||||| || |||||||  || |||| |||||||         
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatatta--atttgttaactttttaaaaa 8502920  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
         |||||||| |||| |||||||||||||||||  | ||||||||| ||| ||||| || |||||| |||||||||||||||||||||    
T  8502919 at---atttcataatgtccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacacccttaa 8502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 14245207 - 14245290
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||| |||||| |||||||||||||||||   ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  14245207 catttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 14245171 - 14245086
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||| |||||| |||||||||||| ||||  |||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  14245171 catttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 14245086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 13634776 - 13634709
Alignment:
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||| ||||  |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 13634709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 26414961 - 26414891
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  26414961 gtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccctta 26414891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 287
Target Start/End: Original strand, 36363103 - 36363271
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||| |||||| |||||||| |||||| |||||||| |||  ||  ||||||| ||||| |         |||||    
T  36363103 actatataacatgtttttctaaaataaatcaagtgtcattgaagttttatatcattgtttatcatgcta--atatgttaactttctaaaaga---cattt 36363197  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacac 287  Q
     ||||| || |||||||||||||||||  | ||| ||| |||||||||||||| ||||||||||||||||||||    
T  36363198 tatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 36392309 - 36392202
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaa 227  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||| ||| |  ||||||||| |||||||         |||||||||||||||||||    
T  36392309 ttttctaaaatagattaagtgtgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt---ataaaacatttcatagtgtctgtaa 36392215  T
Q  228 tttaaaaatgaaa 240  Q
    |||||||||||||    
T  36392214 tttaaaaatgaaa 36392202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 15986707 - 15986624
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| ||||||||| ||||||| |||| ||||  ||||||||||||||||||| |||||||||  ||||||||||||||    
T  15986707 cattttataatgtctgtaaattaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacaccct 15986624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 7544204 - 7544134
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| |||| || | ||||||||||||||||| || ||||||||| |||||||||||||||||    
T  7544204 gtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccctta 7544134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 10650512 - 10650423
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctccc--ttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||| ||||||||||||| |||  |||| |||||||||||  |||||||| |||| ||||||||||||| |||| |||||    
T  10650512 catttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcaccattaat 10650423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 9856942 - 9857011
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| | ||||||||  |||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  9856942 aaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgttta 9857011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 2550525 - 2550465
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  2550525 actatataacatgtttttctataataaattacgtgtgattgaagtattatatgattgttta 2550465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 10072810 - 10072737
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||| |  ||||||||| |||||||    
T  10072810 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt 10072737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 16938527 - 16938479
Alignment:
Q  244 aaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  16938527 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 16938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  229 ttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||| ||||  |||||||||||||||||||||||| ||||||||| |||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 11756939 - 11757002
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| ||||||||||  |||||| | ||||||||||||||||||||| ||||||||||||||    
T  11756939 aaattacgaactatataacatgtttctctaaaataaattaagtgtgattaaagtattatatgat 11757002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 264
Target Start/End: Complemental strand, 20513611 - 20513473
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtatt----atatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtg 220  Q
    ||||||| |||||||||||||||||||||||||||||    ||||||| ||||| |  || |||||||||| |||||||         ||||||||||||    
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatc--atgataatatgttaacttttt---aaaaaacatttcatagtg 20513517  T
Q  221 tctgtaatttaaaaatgaaatttaaaccctcccctcccttcccc 264  Q
    |||||| |||||||||||||  |||| ||| |||||| ||||||    
T  20513516 tctgtagtttaaaaatgaaaagtaaatccttccctcctttcccc 20513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 33744260 - 33744193
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||  ||||||||||||||||||| || | | |||||||||||||||||||||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccct 33744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 34980987 - 34981054
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||| ||||  |||  ||||||||||||||||||||||||||||||||  |||||||||||    
T  34980987 taatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacaccct 34981054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 289
Target Start/End: Complemental strand, 9798775 - 9798615
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| | ||||||||||| |||||||||||||||||||||| ||||  ||| ||| ||||  || |||||||         |||||| |||| ||     
T  9798775 atgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaata--ttgacttttt---aaaaaacatttcgtagtatcc 9798681  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||||||||  ||||| ||| | ||||||  |||| |||| |||||||||||||||||    
T  9798680 gtaatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccatccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 28279636 - 28279476
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgta 226  Q
    ||||| ||||||||| ||||||||||||||||||||||||||  |||| ||| |  ||||||||| |||||||         ||||||||| ||||  ||    
T  28279636 tttttctaaaataaactaagtgtgattgaagtattatatgatcatttatcatgt--taatatgttaacttttt---aaaaaacatttcataatgtccata 28279542  T
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||  ||||   || || || ||||| ||  ||||||||||||||||||||||||    
T  28279541 atttaaaaatgaaaagtaaattttcaccccctttcccatcccaaaccctccatccaaacacaccct 28279476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 2550431 - 2550387
Alignment:
Q  213 tcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  2550431 tcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcc 2550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 10072689 - 10072653
Alignment:
Q  260 tcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||||||||||||||||||||||||||    
T  10072689 tcccctcttaaaccctccatccaaacacacccttaat 10072653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 11437012 - 11436936
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||| |||||||||||| | ||  ||| |||||| ||||||||||||| ||||||||| |||||||||| |||||||    
T  11437012 tgtccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacacgcccttaa 11436936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 20147074 - 20147118
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacacccttaat 20147118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 40305710 - 40305670
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 2183975 - 2184058
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| |||| |||||||||| | ||||  ||| |||||  ||  |||||||||||||||||||||||||||||||||||    
T  2183975 cattttataatgtccgtaatttaaagaggaaaaataagccctcttctatcttcccctcttaaaccctccatccaaacacaccct 2184058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 10204621 - 10204574
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  10204621 ccctcacctcccttcccctcctaaaccctcgatccaaacacaccctta 10204574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 10476090 - 10476023
Alignment:
Q  228 tttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||| ||||  ||||||||| | |||||||||||| ||||||||| || |||||||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacacccttaa 10476023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 36392325 - 36392396
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||| ||||| ||||| | || ||| ||||||||| ||||||||| |||||||||| |||||||    
T  36392325 gtaatttaaaaacgaaatataaacacaccgctctcttcccctcctaaaccctcaatccaaacacgcccttaa 36392396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 42681497 - 42681450
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||    
T  42681497 taaatcctcccctcctttcccctcttaaaccctcaatccaaacacacc 42681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 21581150 - 21581188
Alignment:
Q  251 cccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  21581150 cccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 34980878 - 34980812
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||| |||  | |||||| ||||||||||||||| |||||| || |||||||||||||    
T  34980878 gtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 40815369 - 40815295
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||| ||||  |||| |||| | |||||||||||| |||| | || |||||||||||||||||    
T  40815369 gtctgtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacaccctta 40815295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 10204747 - 10204820
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| ||||||| ||||  |||  ||||||||||||||||||| ||||| |||  ||||||||||||||    
T  10204747 tgtctgtaaattaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacaccct 10204820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 10650509 - 10650546
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtat 160  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  10650509 aatgtttttctaaaataaattaagtgtgattgaagtat 10650546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 17024387 - 17024338
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttt 173  Q
    |||||||| |||||||||||||||  ||||||||||||||||||| ||||    
T  17024387 atgtttttctaaaataaattaagtacgattgaagtattatatgatcgttt 17024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 28279654 - 28279723
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||| ||||  ||||||||| |||||||||||||  || || ||| |||||||||||||||||    
T  28279654 taatttaaaaaggaaaagtaaaccctctcctcccttccccttatagactctcaatccaaacacaccctta 28279723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 40305866 - 40305911
Alignment:
Q  249 ctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  40305866 ctcccctcccttctcctcctaaaccctcaatccaaacacaccctta 40305911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 5688590 - 5688634
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||    
T  5688590 cctcccttcccttcccctcctaaaccctcaatccaaacacaccct 5688634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 33424973 - 33424921
Alignment:
Q  116 tatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| ||||||||| ||||||||||||| | ||||| ||||||||||||||    
T  33424973 tatataaaatgtttttataaaataaattaaatctgattaaagtattatatgat 33424921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 4373748 - 4373685
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| | ||||||||  | ||||||  ||||||||||||||||||||||| |||||||||||    
T  4373748 aaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattatatgat 4373685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 11419259 - 11419188
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||| |||||||||  ||||| |||| ||| |||||| || ||||||||||||  |||||||||||||||    
T  11419259 taatttgaaaatgaaaagtaaactctcctctctcttcccttcataaaccctccatgtaaacacacccttaat 11419188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 12035980 - 12035933
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||| ||||||||||||| |||||| || ||||||||||||||||||    
T  12035980 cctcctctcccttcccctcctaaaccatctatccaaacacacccttaa 12035933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 15986823 - 15986870
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||| || |||||||||| ||||||||| |||||||||||||||||    
T  15986823 ccctcctcttccttcccctcctaaaccctcaatccaaacacaccctta 15986870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 5688638 - 5688604
Alignment:
Q  39 tcttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||||| ||||||||||||    
T  5688638 tcttagggtgtgtttggattgagggtttaggaggg 5688604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 14245294 - 14245260
Alignment:
Q  39 tcttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||||| ||||||||||||    
T  14245294 tcttagggtgtgtttggattgagggtttaggaggg 14245260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 14681540 - 14681467
Alignment:
Q  221 tctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||| |||| || |||| || | ||| |||||||| ||||||||| |||||||||||| |||||    
T  14681540 tctgtaatttaaaaaagaaaatttaaccatcacttcc-ttcccctcctaaaccctcaatccaaacacacacttaa 14681467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 14681550 - 14681600
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| ||||||||||||| ||||||||||| | ||||||| ||||||    
T  14681550 atgtttttttaaaataaattaaatgtgattgaaggaatatatgactgttta 14681600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 42681524 - 42681578
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||  |||||||| |||||||| || ||||||||| ||||||||||||||    
T  42681524 actatataacatgtttttctaaaataattttagtgtgattaaagtattatatgat 42681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 10204656 - 10204701
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||| |||||||||||||||||  |||||||||||||||||    
T  10204656 aatgtctttttaaaataaattaagtgtttttgaagtattatatgat 10204701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 5688475 - 5688535
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||| |||| || || ||||||||| ||||||| |||||||||  ||||||||||||||    
T  5688475 aaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatat 5688535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 16938477 - 16938509
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggg 16938509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 22022896 - 22022844
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||| |||| ||||| |||||||| ||||||||| ||||||||||||| ||||    
T  22022896 taaatcctctcctccattcccctcctaaaccctcaatccaaacacacctttaa 22022844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 22022912 - 22022976
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgatt 169  Q
    |||||| | ||||||||  || ||||| ||||||||||||||||||||||||  |||||| ||||    
T  22022912 aaattacggactatataacatatttttctaaaataaattaagtgtgattgaaagattataggatt 22022976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 22023571 - 22023603
Alignment:
Q  260 tcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||| |||||||||||||||||||||||||    
T  22023571 tcccctcctaaaccctccatccaaacacaccct 22023603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 40815368 - 40815427
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||||| |||||||||  ||||||||||||| |||||||| ||||||||    
T  40815368 actatataacatgtttttataaaataaaa-aagtgtgattgaaatattatataattgttta 40815427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 24560298 - 24560461
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||| |||  ||||||| |||||||         ||||||||||||||     
T  24560298 atgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgtta--atatgttaactttttaaaaaa---catttcatagtgtcg 24560392  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||||  ||||| ||||| ||| |||||||| |||||||||||||||||||||||||    
T  24560393 gtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacaccct 24560461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 41110484 - 41110323
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||| |||||||          |||||||||||||     
T  41110484 atgtttttcgaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta--atatgttaactttttataaaat---atttcatagtgtcc 41110390  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||||||||  |||||| || |||||||||||||| |||| ||||||||||||||||||    
T  41110389 gtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacacc 41110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 105 - 286
Target Start/End: Complemental strand, 27542113 - 27541937
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||||||||||||||  || ||||| ||||||||||||| |||||||||||||||||||||| ||||| ||| |||  |||||||   |||||         
T  27542113 aaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgtta--atatgttagatttttaacaa 27542016  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
         |||||||||||||| ||||||||||||||||| | |||| || |||||||||||||| ||||||||| |||||||||    
T  27542015 gt---atttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 41040109 - 41039950
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaa 227  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||| ||| |||  ||||||| |||||||          ||||||||||||||||||    
T  41040109 ttttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgtta--atatgttaactttttataaaat---atttcatagtgtctgtaa 41040015  T
Q  228 tttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||| ||||| ||||| ||| | ||| ||||||||| |||||| ||||||||||||||||||    
T  41040014 tttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttccatccaaacacaccct 41039950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 36569066 - 36568904
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||| |||  ||||||| |||||||         |||||||||||||      
T  36569066 atgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgtta--atatgttaactttttgaaaaa---catttcatagtgttc 36568972  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    | ||||||||||||||| | |||| ||||||||| |||| ||| |||||||||||||||||||||||||    
T  36568971 gaaatttaaaaatgaaaat-aaactctcccctccattccactcctaaaccctccatccaaacacaccct 36568904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 46204948 - 46205025
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatta 182  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  46204948 aaattatgaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcatttaacatatta 46205025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 25655148 - 25655219
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  25655148 gtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacacccttaa 25655219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 9312630 - 9312476
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaa 227  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||| ||| |||  ||||||| |||||||          ||||||||||||||||||    
T  9312630 ttttctaaaataaattaagtgtgatttgagtattatatgattgtttatcatgtta--atatgttaactttttacaaaat---atttcatagtgtctgtaa 9312536  T
Q  228 tttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||| | |||     |||||||||||||| |||||||||| ||||||||| |||||    
T  9312535 tttaaaaatgaaaatcaaa-----ccctcccttcccctattaaaccctcaatccaaacataccct 9312476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 18654782 - 18654600
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||| | ||||||||||||||||| ||||||||||||||||||  |||| ||| |||  ||||||| ||| ||          
T  18654782 aaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgtta--atatgttaactcttcaaaaa 18654685  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
         |||| |||| ||| |||||||||||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||||||    
T  18654684 at---attttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccct 18654600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 34641151 - 34641236
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| ||| |||| |||||||||||| ||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34641151 cattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccctta 34641236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 28581257 - 28581184
Alignment:
Q  221 tctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||||||||||||| ||||    
T  28581257 tctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaacacactctta 28581184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 295
Target Start/End: Complemental strand, 16275868 - 16275702
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||| |  ||||| ||| |||||||         ||||||||| ||||     
T  16275868 atgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgt--taataagttaacttttt---ataaaacatttcataatgtcc 16275774  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    | ||||||||||||||   | ||| |||||||||||| ||||  |||||| |||||||||||||||| ||||    
T  16275773 gaaatttaaaaatgaatagtgaactctcccctccctttcccttataaaccatccatccaaacacaccgttaa 16275702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 52473996 - 52474157
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    ||||| || ||||||||||||  ||||||||||||||||||||| |||||| |||||  ||||||||| |||||||          |||||||||  ||     
T  52473996 atgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatat--taatatgttaactttttacaaaat---atttcataggatcc 52474090  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||| |||  |||||||||| ||||||||||||| |||||||  | ||||||||||||    
T  52474091 gtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaacccatcctccaaacacacc 52474157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 21773844 - 21773913
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  21773844 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgattgttta 21773913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 25655154 - 25654971
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtatt--atatgattgtttaacatattataatatgtttactttttnnn 202  Q
    |||||| | ||||||||  |||||||| |||||||||||||||||||||||||||||  |||||||  |||| |||||  ||||||||| ||| ||        
T  25655154 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatatgatcatttatcatat--taatatgttaactctt---c 25655060  T
Q  203 nnnnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
          |||||| ||||||  ||||| |||||||||||  |||||||||||||||||||||||| ||||  ||||||| ||| |||||||    
T  25655059 aaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa-tctccatctaaatacaccct 25654971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 24253883 - 24253966
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||| ||| |||| |||||||||||| ||||  |||| ||| ||||||||||||||  |||||||||||||||||||||||||    
T  24253883 cattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccct 24253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 14898057 - 14898107
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14898057 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgttta 14898107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 24560285 - 24560215
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||   ||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  24560285 gtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 24560215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 28582685 - 28582758
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||||||||||| ||||  |||||||||||||||||||||||| |||| ||||  |||||||||||||| ||||    
T  28582685 gtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccctaaata 28582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 26135959 - 26136039
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||| ||| |||| |||||||||||| ||||  |||||||||| ||||||||||||| |||||||||||| ||| ||||||    
T  26135959 attttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacacc 26136039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 127 - 296
Target Start/End: Complemental strand, 37102308 - 37102155
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgta 226  Q
    ||||| |||||||||| ||||||| ||||||||||||||||| |||     |||  ||||||||| |||||||         |||||||||||||| |||    
T  37102308 tttttctaaaataaatcaagtgtggttgaagtattatatgatcgtt---attatgttaatatgttaacttttt---aaaaaacatttcatagtgtccgta 37102215  T
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||||    
T  37102214 atttaaaaatgaaaactaaaccctcccctcc----------taaaccctccatccaaacacacccttaat 37102155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 5903598 - 5903547
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  5903598 taaaccctcccctgccttcccctcttaaatcctcaatccaaacacaccctta 5903547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 6803373 - 6803448
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||| |||| |||||| ||| |||| ||||||||| |||||| || |||||||||||| |||||    
T  6803373 gtctgtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacacacttaa 6803448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 41110497 - 41110568
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||| ||||  |||||| ||| |||||||||||||  |||||||| ||||||||||||||||||    
T  41110497 gtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacacccttaa 41110568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 10943681 - 10943620
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    ||||||||||| |||| ||||| | || ||||| ||||||||||||||||||||||||||||    
T  10943681 taatttaaaaaagaaaattaaatcttctcctcctttcccctcttaaaccctccatccaaaca 10943620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 13082937 - 13082856
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||||| ||| ||||||||| ||| ||||||| ||| ||| ||| | ||  |||||||||||||||||||||||    
T  13082937 catttcatagtgtccgtattttaaaaataaaaattaaaccttcctctctctttctcttctaaaccctccatccaaacacacc 13082856  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 220573 - 220641
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||| ||||  ||||  ||||||||||||| |||| ||||||||||||||||||| |||||    
T  220573 gtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccct 220641  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 2387932 - 2387864
Alignment:
Q  115 ctatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattat 183  Q
    |||||||  |||||||| ||||||||||||||||||||| || ||||||||||| ||||| ||| ||||    
T  2387932 ctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcatgttat 2387864  T

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Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 8432305 - 8432257
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  8432305 cctcccctctcttcccctcgtaaaccctccattcaaacacacccttaat 8432257  T

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Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 14898151 - 14898227
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||| |||||||||||||||||  ||||  ||| |||| ||||| ||||||||||||| || |||||||||||||||    
T  14898151 tgtccgtaatttaaaaatgaaagctaaattctctcctctcttcctctcttaaaccctcaattcaaacacacccttaa 14898227  T

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Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 23028088 - 23028168
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||| ||||||||||||| |||  |||  ||| |||||  ||||||||  ||||||||||||||||||||||    
T  23028088 atttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

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Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 26135859 - 26135935
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    ||||||||||| || || |||||||||  ||||||||||||||||  |||||||||||||| ||| |||| ||||||    
T  26135859 aaattatgaacaatgtaaaatgttttttaaaaataaattaagtgtttttgaagtattatataattatttatcatatt 26135935  T

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Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 30200171 - 30200123
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||    
T  30200171 catttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcc 30200123  T

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Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 21090253 - 21090190
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||| || || ||| ||||| |||||||||||||||||  |||||||||||||||||    
T  21090253 aaattatgaacaatgtaaaatatttttttaaaataaattaagtgtttttgaagtattatatgat 21090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 42772088 - 42772046
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    |||||||||||||||||||||||||| || |||||||||||||    
T  42772088 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 18654797 - 18654850
Alignment:
Q  244 aaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaata 297  Q
    |||| |||||||||||||||||| ||||||||| || ||||||||| |||||||    
T  18654797 aaactctcccctcccttcccctcctaaaccctcaattcaaacacactcttaata 18654850  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 25499074 - 25499139
Alignment:
Q  227 atttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| ||||  |||||||| ||||| || |||||||||||| |||||||||||||| ||||    
T  25499074 atttaaaaaagaaaagtaaacccttccctctctccccctcttaaactctccatccaaacaccccct 25499139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 30200267 - 30200341
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctcc----atccaaacacaccctta 294  Q
    |||||||||||| ||||  |||||||| ||||||||||||||| || |||||||    |||||||||||||||||    
T  30200267 gtaatttaaaaaagaaaagtaaacccttccctcccttcccctcctataccctccctcaatccaaacacaccctta 30200341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 52185100 - 52185170
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||| ||||||||||||| | | |||||||||||||||||||||||| ||| |  ||||||||| |||||||    
T  52185100 tttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgt--taatatgttaacttttt 52185170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 55428550 - 55428619
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    |||| |||||||||| | ||||  |||| | ||||||||||||||||| ||||||||| |||||||||||    
T  55428550 tgtccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 40464031 - 40463975
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattat 183  Q
    ||||| |||||||||||||||| ||||||| | ||||||||||||||| ||| ||||    
T  40464031 tttttctaaaataaattaagtgagattgaatttttatatgattgtttatcatgttat 40463975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 42699794 - 42699718
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatt 181  Q
    |||||| |||| ||||| ||| |||||  ||||||||||||||||  |||||||||||||||||  |||| ||||||    
T  42699794 aaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcatatt 42699718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 54574522 - 54574466
Alignment:
Q  126 gtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatta 182  Q
    |||||| |||||||||||||| |||||||||||||||||| |  ||||| |||||||    
T  54574522 gtttttctaaaataaattaagcgtgattgaagtattatataaccgtttatcatatta 54574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 220560 - 220404
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||| |||| |||||||||| ||||| |||||||||  || |||  ||||||| |||||||         ||||||||| ||||     
T  220560 atgtttttctaaaataaatcaagtatgattgaagtgttataagattgtttattatgtta--atatgttaactttttaaaaaa---catttcataatgtcc 220466  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||||||  ||||||           ||||||| ||||||||||||||||| |||||||||||    
T  220465 gtaatttaaaaatgaaaactaaacc-----------tcccctcctaaaccctccatccaaatacacccttaat 220404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 651793 - 651852
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattata 164  Q
    |||||||  ||||||||  |||||||| ||||||||||||||||||||| || |||||||    
T  651793 aaattatagactatataacatgtttttctaaaataaattaagtgtgattaaaatattata 651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 10748460 - 10748417
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatga 167  Q
    |||||||| ||||||||||||||||||||  |||||||||||||    
T  10748460 atgtttttctaaaataaattaagtgtgataaaagtattatatga 10748417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 10943778 - 10943727
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||| ||||    
T  10943778 aatgtttttttaaaataaattaagtgtttttgaagtattatataattattta 10943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 294
Target Start/End: Complemental strand, 16884042 - 16883972
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||| ||||||| ||||| ||| ||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  16884042 tgtaaattaaaaaagaaatgtaagccctccccttccttccccact-aaaccctctttccaaacacaccctta 16883972  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 17474382 - 17474453
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||  |||  | ||| |||||||||||||||||| | ||||||| ||||||||||| ||||||    
T  17474382 gtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacacatccttaa 17474453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 24253762 - 24253719
Alignment:
Q  251 cccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||    
T  24253762 cccctccctttccctcctaaaccctcaatccaaacacaccctta 24253719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 36727384 - 36727423
Alignment:
Q  257 ccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  36727384 ccttcccttcttaaaccctccatccaaacacatccttaat 36727423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 37807176 - 37807211
Alignment:
Q  139 aaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||||||||||||||||||||||||| |||||    
T  37807176 aaattaagtgtgattgaagtattatatgatcgttta 37807211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 40858627 - 40858690
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| |||| || || ||||||||| ||||||||||| |||||  |||||||||||||||||    
T  40858627 aaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgat 40858690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 43005913 - 43005829
Alignment:
Q  113 aactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    |||||||||  || ||||| ||||||||||| | | ||||||||||||||||||||  |||| |||||  ||||||||| |||||||    
T  43005913 aactatataacatatttttctaaaataaatttaatttgattgaagtattatatgatattttatcatat--taatatgttaacttttt 43005829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 46556214 - 46556265
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||||||  ||||||||  |||||||||| |||||||||||||||||||||    
T  46556214 actatataatatgtttttccaaaataaattgagtgtgattgaagtattatat 46556265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 48683674 - 48683737
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| |||| || || ||||||||| |||||||||||||||||  ||||| |||||||||||    
T  48683674 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgat 48683737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 51819285 - 51819238
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||| ||||||||||| |||||||||||||||||||| ||| |||||    
T  51819285 tttttttaaaataaatttagtgtgattgaagtattatacgatcgttta 51819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 10748333 - 10748299
Alignment:
Q  254 ctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||||| |||||||||||||||||||||    
T  10748333 ctcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 10943790 - 10943852
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaaca 286  Q
    ||||||||||||| |||  | |||||||||||| ||| ||||| ||||||||| |||||||||    
T  10943790 gtaatttaaaaattaaaagtgaaccctcccctctctttccctcataaaccctcaatccaaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 44412405 - 44412359
Alignment:
Q  248 cctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||| ||||||||| ||||||||| || ||||||||||||||    
T  44412405 cctcccctctcttcccctcctaaaccctcaattcaaacacaccctta 44412359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 49815512 - 49815546
Alignment:
Q  134 aaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||||| |||||||||||||||||||||    
T  49815512 aaaataaattaagcgtgattgaagtattatatgat 49815546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 16884135 - 16884090
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||| |||||||||||||||||  |||||||||||||||||    
T  16884135 aatgtctttttaaaataaattaagtgtttttgaagtattatatgat 16884090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 37237003 - 37237047
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||||| |||||||||||||||||||||||||| || |||||    
T  37237003 aatgtttttg-aaaataaattaagtgtgattgaagtactaaatgat 37237047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 42772116 - 42772157
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| ||||||||||||||||  |||||||||||||||||    
T  42772116 tttttgaaaaataaattaagtgtttttgaagtattatatgat 42772157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 44412445 - 44412486
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  44412445 tttttttaaaataaattaagtgtttttgaagtattatatgat 44412486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 51819210 - 51819146
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaac 285  Q
    |||||||||||||||||||||  |||| || |||||| ||||||||  |||||| |||||||||||    
T  51819210 gtctgtaatttaaaaatgaaaaataaatcc-cccctctcttccccttctaaaccttccatccaaac 51819146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 9312650 - 9312717
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||| |||| | |||||||||||     ||||||| ||||||||| |||||||||| ||||||||    
T  9312650 gtaatttaaaaaagaaaatcaaaccctcccc-----tcccctcctaaaccctcaatccaaacactcccttaat 9312717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 27542108 - 27542172
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||| ||||   |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  27542108 taatttaaaaaagaaaaacaaactctcccctccctgcccctcgtaaaccctcgatccaatcacac 27542172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 27956002 - 27956034
Alignment:
Q  131 tgtaaaataaattaagtgtgattgaagtattat 163  Q
    |||||||| ||||||||||||||||||||||||    
T  27956002 tgtaaaatgaattaagtgtgattgaagtattat 27956034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 31684367 - 31684399
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaa 156  Q
    |||||||| ||||||||||||||||||||||||    
T  31684367 atgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 34641000 - 34641032
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  34641000 ttagggtgtgtttggattgagggtttaggaggg 34641032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 34641077 - 34641117
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  34641077 ttttttaaaataaattaagtgtttttgaagtattatatgat 34641117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 37102385 - 37102353
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggg 37102353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 41414123 - 41414075
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||| ||||| ||||||||| ||| ||||| ||||||||    
T  41414123 ccctcccctccctttccctcctaaaccctcaatctaaacatacccttaa 41414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 114 - 296
Target Start/End: Complemental strand, 30487478 - 30487302
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| |||  ||||||| |||||||         |||||    
T  30487478 actatataacatgtttttataaaataaatcaagtgtgattgaagtattatattattgtttatcatgtta--atatgttgactttttaaaaga---cattt 30487384  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||| ||||  |||||||| |||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30487383 catactgtcc-taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacacccttaat 30487302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 128 - 296
Target Start/End: Complemental strand, 9721297 - 9721134
Alignment:
Q  128 ttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaa 227  Q
    |||| |||| |||| | |||||||||||||||||||||||||||||| || ||||  ||||||| |||||||         |||| ||||||||| ||||    
T  9721297 ttttttaaattaaagttagtgtgattgaagtattatatgattgtttatcaaatta--atatgttaactttttaaaaaa---cattccatagtgtccgtaa 9721203  T
Q  228 tttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  9721202 tttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacacccttaat 9721134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 133 - 296
Target Start/End: Complemental strand, 9719185 - 9719027
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaa 232  Q
    |||| |||||| |||||||||||||||||||||||||||||| || ||||  ||||||| |||||||         |||| ||||||||| |||||||||    
T  9719185 taaattaaatttagtgtgattgaagtattatatgattgtttatcaaatta--atatgttaactttttaaaaaa---cattccatagtgtccgtaatttaa 9719091  T
Q  233 aaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||||||  |||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  9719090 aaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaacacacgcttaat 9719027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 294
Target Start/End: Original strand, 33236013 - 33236196
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| ||||||||||||||  ||||||||| |||||||||||||||| ||| |||  ||||||| |||||||         
T  33236013 aaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgtta--atatgttaactttttaaaaa 33236110  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
         ||||||||||||| |||||||||||||||||  ||| | ||||||||| |||| ||| ||||| ||||||||||| |||||||||    
T  33236111 a----atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactctccatccaaatacaccctta 33236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 137 - 296
Target Start/End: Original strand, 1300714 - 1300868
Alignment:
Q  137 ataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtctgtaatttaaaaat 236  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||  ||||||| |||||||          |||||||| |||| |||||||||||||    
T  1300714 ataaattaagtgtgattgaagtattatatgattgtttatcaggtta--atatgttaactttttataaaat---atttcatattgtccgtaatttaaaaat 1300808  T
Q  237 gaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    ||||  ||||||||||||||| |||  ||   ||||||||||||||||||||||||||||    
T  1300809 gaaaagtaaaccctcccctccattcatcttccaaaccctccatccaaacacacccttaat 1300868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 10818377 - 10818459
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| ||||| ||| ||||||||||||||    
T  10818377 catttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 14515648 - 14515715
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  14515648 taatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccct 14515715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 105 - 287
Target Start/End: Complemental strand, 19278220 - 19278039
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatatta-ta-atatgtttactttttnnn 202  Q
    |||||| | ||||||||  |||||||| ||||||||||| ||| |||||||||||| ||||||| ||||| ||| ||| || ||||||  |||||||       
T  19278220 aaattacggactatataacatgtttttctaaaataaatttagtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaa 19278121  T
Q  203 nnnnnncatttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacac 287  Q
           |||| |||||||| |||||||||||||||||  ||||| ||| ||| |||||||||| ||||||||||||||||||||    
T  19278120 aaat---attttatagtgtcagtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 14515541 - 14515471
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||| ||||   ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  14515541 gtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 14515471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 31849182 - 31849113
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||| |||| |||||||    
T  31849182 gtctgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 1390481 - 1390561
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||| |||||||||||||||||  |||| || | ||||| |||||||| |||||||| ||||||||||||||    
T  1390481 atttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaacccttcatccaaacacacc 1390561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 10818302 - 10818226
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||| |||||||||||| ||||  |||||  ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10818302 tgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacacccttaa 10818226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 124 - 294
Target Start/End: Complemental strand, 21607007 - 21606852
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||| |||||||| |||||||||||| ||| ||||| ||| |||  ||||||| |||||||         ||||||||||| ||     
T  21607007 atgtttttctaaaataaataaagtgtgactgaagtattatacgatcgtttatcatgtta--atatgttaactttttataaaa---catttcatagtttcc 21606913  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||    
T  21606912 gtaatttaaaaatgaaaagtaaaccctcccctcc----------taaaccctccatccaaacacaccctta 21606852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 4097684 - 4097754
Alignment:
Q  219 tgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||| |||||||||||| ||||  | |||||| ||||||||||||||||||||||||| ||||||||||||    
T  4097684 tgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 16738079 - 16737997
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    ||||||||||| ||  ||||||||||| ||||  |||| | ||||||| ||||| ||||||||||||||||||||||||||||    
T  16738079 catttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatccaaacacaccc 16737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 665907 - 665839
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||||||  | |||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  665907 taatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccct-catccaaacacaccctta 665839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 9051734 - 9051779
Alignment:
Q  250 tcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacacccttaa 9051779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 9719208 - 9719273
Alignment:
Q  226 aatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccc 291  Q
    |||||||||| |||| |||||||| |||||| ||||||||| ||||||||| ||||||||||||||    
T  9719208 aatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 34176497 - 34176576
Alignment:
Q  210 atttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||| |||||||||||||||||  ||||| |||  ||| ||| ||||| |||||||||||||||||||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaactctcatctctctt-ccctcataaaccctccatccaaacacacc 34176576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 4097665 - 4097602
Alignment:
Q  134 aaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |  ||||||||| |||||||    
T  4097665 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt 4097602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 289
Target Start/End: Complemental strand, 5585484 - 5585304
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnn 204  Q
    |||||| | ||||||||  |||||||| |||||||||||||||||||||||| |||| ||| || |||||  || |||  |||||||  ||||||         
T  5585484 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgtta--atatgttacctttttaaaaa 5585387  T
Q  205 nnnncatttcatagtgtctgtaatttaaaaatgaaatt-taaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
        |||||||||||||  |||||||||||| ||||   ||||| || || | |||||||||| ||||||||||||||||||||||    
T  5585386 a---catttcatagtgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 25741478 - 25741561
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 199  Q
    ||||||||  |||||||| |||||||||||||| |||| |||||| ||||||||| ||||| ||||||||  |||||| |||||||    
T  25741478 actatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattat--tatgttaacttttt 25741561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 2892764 - 2892707
Alignment:
Q  126 gtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattat 183  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||| ||| ||||    
T  2892764 gtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgttat 2892707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 19278214 - 19278278
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||| |||| | ||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  19278214 gtaatttaaaaaagaaaat-aaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 9298647 - 9298735
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaa-----ccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| |||| ||||||||||| |||||  ||||     |||||||||||||||||||| ||| |||| ||||||||||||||||    
T  9298647 catttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcccctcccttcccctcctaaccccttcatccaaacacaccct 9298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 12811153 - 12811094
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  12811153 actatataatatgtttttctaaaataaattaagtgtgattgaagta-gatatgattgttta 12811094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 13583800 - 13583844
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  13583800 atgtttttctaaaataaattaagtgtgattgaaatattatatgat 13583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 23091040 - 23090992
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||    
T  23091040 ccctcccctcccttcccctcctaaaccttcaatccaaacacacccttaa 23090992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 31849181 - 31849319
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  || ||||| |||||||||| |||||||||||||||||||||| |||||||| ||  |||  ||||||| | |||||         |||||    
T  31849181 actatataacatatttttctaaaataaatcaagtgtgattgaagtattatattattgtttatcacgtta--atatgttaattttttaaaaga---cattt 31849275  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
     |||||||| |||||||||||||||||  | |||||||||||||    
T  31849276 tatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 31849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 2893701 - 2893752
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||||||  |||||||| ||||||||||||||||||||||| |||||||||    
T  2893701 actatataacatgtttttctaaaataaattaagtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 26318379 - 26318430
Alignment:
Q  117 atatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||| ||||||||| |||||||||||||||||  |||||||||||||||||    
T  26318379 atataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgat 26318430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 296
Target Start/End: Original strand, 4097504 - 4097538
Alignment:
Q  262 ccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||||||||||||||||||||||||||    
T  4097504 ccctcttaaaccctccatccaaacacacccttaat 4097538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 16738169 - 16738242
Alignment:
Q  221 tctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||||||| ||||  ||||| ||||||| ||||||| || ||||||||| ||||||||| ||||||||    
T  16738169 tctgtaatttaaaaaagaaaagtaaactctcccct-ccttcccatcctaaaccctcaatccaaacaaacccttaa 16738242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 30850094 - 30850016
Alignment:
Q  105 aaattatgaactatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattat 183  Q
    |||||||||| ||||||  |||||||| ||||| ||||| ||| | |||||||||||||||||| ||||| ||| ||||    
T  30850094 aaattatgaattatataatatgtttttttaaaacaaatttagtataattgaagtattatatgatcgtttatcatgttat 30850016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 1390353 - 1390316
Alignment:
Q  258 cttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  1390353 cttcccctcataaaccctccatccaaacacacccttaa 1390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 23091158 - 23091195
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaa 284  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23091158 ccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 32926737 - 32926770
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||||||||||||||||||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgat 32926770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 12811152 - 12811224
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||| ||||||||| | ||||  ||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  12811152 gtctctaatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccct 12811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 16738167 - 16738115
Alignment:
Q  116 tatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| ||||||||| ||||||||| ||||||| ||| ||||||||||||||    
T  16738167 tatataaaatgtttttctaaaataaagtaagtgttatttaagtattatatgat 16738115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 26318482 - 26318546
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||| ||||  |||| | ||||||||||| ||||| ||||| ||||||||||||||||    
T  26318482 taatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 12811066 - 12811035
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaa 240  Q
    ||||||||||||||||||||||||||||||||    
T  12811066 catttcatagtgtctgtaatttaaaaatgaaa 12811035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 15323264 - 15323225
Alignment:
Q  253 cctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  15323264 cctcccttcccctcctaaaccctcaatccaaacacaccct 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 15353403 - 15353364
Alignment:
Q  253 cctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  15353403 cctcccttcccctcctaaaccctcaatccaaacacaccct 15353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 1300625 - 1300659
Alignment:
Q  39 tcttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||||| ||||||||||||    
T  1300625 tcttagggtgtgtttggattgagggtttaggaggg 1300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 5381343 - 5381305
Alignment:
Q  127 tttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  5381343 tttttttaaaataaattaagcgtgattgaagtattatat 5381305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 6034235 - 6034201
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagt 158  Q
    |||||||| ||||||||||||||||||||||||||    
T  6034235 atgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 9721315 - 9721381
Alignment:
Q  226 aatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||| |||| |||||||| |||||| ||| || || ||||||||| || ||||||||||||    
T  9721315 aatttaaaaaagaaaattaaacccacccctctcttaccttcataaaccctcaattcaaacacaccct 9721381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 10293421 - 10293494
Alignment:
Q  221 tctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    |||||||||| |||| ||||  ||| | ||||||||||||| |||| |||||||| |||||||| ||||||||||    
T  10293421 tctgtaatttgaaaaagaaaagtaagctctcccctcccttctcctcctaaacccttcatccaaa-acacccttaa 10293494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 14515551 - 14515593
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    ||||||| | ||||||||||||||||||| |||||||||||||    
T  14515551 aatgtttctctaaaataaattaagtgtgaatgaagtattatat 14515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 16509371 - 16509405
Alignment:
Q  134 aaaataaattaagtgtgattgaagtattatatgat 168  Q
    ||||||||| |||||||||||||||||||||||||    
T  16509371 aaaataaatcaagtgtgattgaagtattatatgat 16509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 21607019 - 21607085
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||||| ||||| |||||  ||  ||| ||||||||| ||||||||| ||||||||||||    
T  21607019 tgtaatttaaaaacgaaatgtaaacattcatctctcttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 30487500 - 30487546
Alignment:
Q  243 taaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||| ||||||||||||| ||||||||| ||| ||||||||    
T  30487500 taaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 33041552 - 33041590
Alignment:
Q  125 tgtttttgtaaaataaattaagtgtgattgaagtattat 163  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  33041552 tgtttttttaaaataaattaagtgtgattgaagtgttat 33041590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 34176416 - 34176466
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    |||||||| |||||||||| ||||||||||| ||||||||| ||| |||||    
T  34176416 atgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgttta 34176466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 4097270 - 4097233
Alignment:
Q  257 ccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacaccctta 4097233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 25468562 - 25468521
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatat 165  Q
    |||||||| |||||||||||||||||  ||||||||||||||    
T  25468562 atgtttttttaaaataaattaagtgtttttgaagtattatat 25468521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 31798914 - 31798947
Alignment:
Q  39 tcttagggtgtgtttggattgacggtttaggagg 72  Q
    |||||||||||||||||||||| |||||||||||    
T  31798914 tcttagggtgtgtttggattgagggtttaggagg 31798947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 33041542 - 33041473
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||| ||||||||||||||||  ||||  ||||||||| |||| ||| ||||||| | ||||||||||||    
T  33041542 gtctataatttaaaaatgaaaaataaattctcccctcctttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 383018 - 382978
Alignment:
Q  123 aatgtttttgtaaaataaattaagtgtgattgaagtattat 163  Q
    ||||||||| |||||||||||||||||  ||||||||||||    
T  383018 aatgtttttttaaaataaattaagtgtttttgaagtattat 382978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 666019 - 666091
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||| |||||||| ||||  ||||| |||| || ||||| |||| ||||||| ||||||||||| |||||    
T  666019 gtctgtagtttaaaaaagaaaaataaactctcctcttccttctcctcgtaaaccccccatccaaacataccct 666091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 2900071 - 2900118
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcc 257  Q
    ||||||||||||||| ||||||||||||||||  |||| ||||||||||    
T  2900071 catttcatagtgtctataatttaaaaatgaaaagtaaa-cctcccctcc 2900118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 3841296 - 3841332
Alignment:
Q  258 cttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  3841296 cttcccctcctaaacccttcatccaaacacaccctta 3841332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 15323223 - 15323255
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  15323223 ttagggtgtgtttggattgagggtttaggaggg 15323255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 15353362 - 15353394
Alignment:
Q  41 ttagggtgtgtttggattgacggtttaggaggg 73  Q
    |||||||||||||||||||| ||||||||||||    
T  15353362 ttagggtgtgtttggattgagggtttaggaggg 15353394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 31799131 - 31799171
Alignment:
Q  252 ccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    ||||||||| ||||||||||| || ||||||||||||||||    
T  31799131 ccctccctttccctcttaaactcttcatccaaacacaccct 31799171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 32922437 - 32922485
Alignment:
Q  135 aaataaattaagtgtgattgaagtattatatgattgtttaacatattat 183  Q
    ||||| |||||||||||| |||||||||||||||| |||| ||| ||||    
T  32922437 aaatatattaagtgtgatcgaagtattatatgattatttatcatgttat 32922485  T

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Target: scaffold0262 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 16469 - 16294
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||| || ||||         |||||    
T  16469 actatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta--atatgttaacgttttataaaa---cattt 16375  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||   ||||||||||||||||  ||||||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  16374 catagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaacaaaccctta 16294  T

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Target: scaffold0067 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 39353 - 39186
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaag---tattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtg 220  Q
    |||||||| |||||||||||||||||||||||||   |||||||||||  |||| ||| |||  ||||||| |||||||         ||||||||||||    
T  39353 atgtttttctaaaataaattaagtgtgattgaagaagtattatatgatcatttatcatgtta--atatgttaactttttaaaaaa---catttcatagtg 39259  T
Q  221 tctgtaatttaaaaatgaaatttaaaccct-cccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    || |||||||||||||||||  |||||||| ||||||  |||||||| |||||||||||||||||||||||||    
T  39258 tccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctccatccaaacacaccct 39186  T

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Target: scaffold0067; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 39366 - 39438
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacccttaat 296  Q
    |||||||||||| ||||  |||||||||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  39366 gtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacccttaat 39438  T

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Target: scaffold0198 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 3230 - 3150
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    ||||||||||||||||||||||||||| ||||  ||||| |||||||||||||||||| ||||| ||| ||||||||||||    
T  3230 catttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0171 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 16021 - 16196
Alignment:
Q  114 actatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncattt 213  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||| ||| |||||||  |||||  ||||||||| |||||||         |||||    
T  16021 actatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatat--taatatgttaacttttt---aaaaaacattt 16115  T
Q  214 catagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    |||| | || |||||||||||||||||  ||||| ||  |||||||||||||| |||| |||| ||| ||||||| |||||    
T  16116 cataatatccgtaatttaaaaatgaaaaataaactctttcctcccttcccctcctaaatcctctatcgaaacacaacctta 16196  T

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Target: scaffold0294 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 15344 - 15504
Alignment:
Q  124 atgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttnnnnnnnnncatttcatagtgtct 223  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||  |  ||||||||| || ||||         || |||||||||||     
T  15344 atgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgt--taatatgttgacctttt---aaaaaaca-ttcatagtgtcc 15437  T
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacacc 290  Q
    ||||||||||||| |||  || | ||||   ||||||||| || |||||||||||||||||||||||    
T  15438 gtaatttaaaaataaaaagtagatcctcatttcccttcccttcctaaaccctccatccaaacacacc 15504  T

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Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 242377 - 242456
Alignment:
Q  209 catttcatagtgtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||| ||| |||| |||||||||||| ||||  |||||||||||||||||||||||  |||||| ||||||||||||||    
T  242377 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

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Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 17715 - 17784
Alignment:
Q  223 tgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccctta 294  Q
    ||||||||||||| ||||  |||||||  ||||||||||| ||| |||||||||||||||||||||||||||    
T  17715 tgtaatttaaaaaagaaaagtaaaccc--ccctcccttccactcctaaaccctccatccaaacacaccctta 17784  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 6656 - 6584
Alignment:
Q  220 gtctgtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacaccct 292  Q
    |||||||||||||||| ||||  ||||||||||||||||||| |||| |||| | || |||||||||||||||    
T  6656 gtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccct 6584  T

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Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 6674 - 6715
Alignment:
Q  133 taaaataaattaagtgtgattgaagtattatatgattgttta 174  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  6674 taaaataaatttagtgtgattgaagtattatatgatcgttta 6715  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 1240 - 1175
Alignment:
Q  224 gtaatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 289  Q
    |||||||||||| ||||  ||||| |||||||| ||||||||| ||||||||| ||||||||||||    
T  1240 gtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 1597 - 1645
Alignment:
Q  247 ccctcccctcccttcccctcttaaaccctccatccaaacacacccttaa 295  Q
    ||||||||||| |||| ||| ||||||||| || |||||||||||||||    
T  1597 ccctcccctccattcctctcctaaaccctcaattcaaacacacccttaa 1645  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  225 taatttaaaaatgaaatttaaaccctcccctcccttcccctcttaaaccctccatccaaacaca 288  Q
    ||||||||||| |||   ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 184608 - 184641
Alignment:
Q  40 cttagggtgtgtttggattgacggtttaggaggg 73  Q
    ||||||||||||||||||||| ||||||||||||    
T  184608 cttagggtgtgtttggattgagggtttaggaggg 184641  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 69378 - 69326
Alignment:
Q  116 tatatacaatgtttttgtaaaataaattaagtgtgattgaagtattatatgat 168  Q
    |||||| ||||||||| |||||||||||||| ||||  |||||||||||||||    
T  69378 tatataaaatgtttttttaaaataaattaagggtgacagaagtattatatgat 69326  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 53088 - 53122
Alignment:
Q  263 cctcttaaaccctccatccaaacacacccttaata 297  Q
    |||| ||||||||||||||||||||||||||||||    
T  53088 cctcctaaaccctccatccaaacacacccttaata 53122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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