View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0995-Insertion-7 (Length: 379)
Name: NF0995-Insertion-7
Description: NF0995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0995-Insertion-7 |
 | |
|
| [»] chr2 (18 HSPs) |
| |
|
Alignment Details
Target: chr2 (Bit Score: 328; Significance: 0; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 8 - 379
Target Start/End: Original strand, 15013133 - 15013504
Alignment:
| Q |
8 |
ggtttttcacactctgacatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaatttttta |
107 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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|
| T |
15013133 |
ggtttttcacactctgacatacgcatcatcatcaaaaaagcaccatggttactttcatcacaaccccacaaaaggttattgcctaagtttcaatttttta |
15013232 |
T |
|
| Q |
108 |
tatccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttca |
207 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
15013233 |
tatccaacggtgcttctttatctgatattgttccattgttaactgcaaaccctcacattttacaaagtagcttggacaaacggataatccctctttttca |
15013332 |
T |
|
| Q |
208 |
attattaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgtttataactccccttcaccttctagaggctaat |
307 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
15013333 |
attattaaataggtttttgaaaaccaacaaggatactattgtttacttaattctaaattcaaggtcgtttataactccccttcaccttctagaggctaat |
15013432 |
T |
|
| Q |
308 |
atcaatttgatggttgattttggagtttgtgattctgccattgctagattgattcgaactaggaaatctata |
379 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
15013433 |
atcaatttgatggttgattttggagtttgtgattctgccattgctagattgcttcgaactaggaaatctata |
15013504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 8 - 379
Target Start/End: Original strand, 31969050 - 31969424
Alignment:
| Q |
8 |
ggtttttcacactctgacatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaatttttta |
107 |
Q |
| |
|
||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
31969050 |
ggtttttcaaactctgacatacgcatcttcatcaaaaaagcaccatggttactttcatcacaaccccacaaaaggttattgcctaagtttcaatttttta |
31969149 |
T |
|
| Q |
108 |
tatccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31969150 |
tatccaatggtgcttctttatctgatattgttccattgttaactgcaaaccctcacattttacaaagtagcttggacaaacgaataatccctctttttca |
31969249 |
T |
|
| Q |
208 |
attattaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgttta---taactccccttcaccttctagaggct |
304 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
31969250 |
attgttaaataggttttcgaaaaccaacaaggatactattgtttacttaattcgacattcaaggtcgtttattgtttatccccttaaccttctagaggct |
31969349 |
T |
|
| Q |
305 |
aatatcaatttgatggttgattttggagtttgtgattctgccattgctagattgattcgaactaggaaatctata |
379 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
31969350 |
aatatcaatttgatggttgattttggagtttatgattctgccattgctagattgcttcgaactaggaaatctata |
31969424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 24 - 358
Target Start/End: Complemental strand, 15004294 - 15003958
Alignment:
| Q |
24 |
acatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatatccaatggtgcttc |
123 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||||| |||||| ||||| | |||||| | ||||||||||||||| ||||||| |||||||| |
|
|
| T |
15004294 |
acatacgcatcatcatcacaaaagcaccttggttactttcatcgcaaccccacaaaggtttattgtcaaagtttcaattttttctatccaaaggtgcttc |
15004195 |
T |
|
| Q |
124 |
tttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttcaattattaaataggttt |
223 |
Q |
| |
|
|| |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || |||||||| ||||||||| |||| |||||||||||| |
|
|
| T |
15004194 |
ttcctctgatattgtttcattgttaacttcaaaccctcgaattttacaaagtagcttggagaatcgaataatccctctttttgaattgttaaataggttt |
15004095 |
T |
|
| Q |
224 |
tcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgttta---taactccccttcaccttctagaggctaatatcaatttgatgg |
320 |
Q |
| |
|
||| |||||||||||||||| |||||| | |||||||| ||||||| ||||||| | |||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
15004094 |
tcg-aaaccaacaaggataccattgttggcttaattcgatattcaagatcgtttactttttatccctatcactttctagaggctaatatcaatttgatgg |
15003996 |
T |
|
| Q |
321 |
ttgattttggagtttgtgattctgccattgctagattg |
358 |
Q |
| |
|
| ||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
15003995 |
tggattttgatgtttctgattctaccattgctagattg |
15003958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 14520044 - 14520415
Alignment:
| Q |
11 |
ttttcacactctgacatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatat |
110 |
Q |
| |
|
||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||| | | |
|
|
| T |
14520044 |
ttttcacacgataacatacgcatcatcatcacaaaagcaccatggttactttcatcacaaccccacaaaatggtattgccaaagtttcaatttttactct |
14520143 |
T |
|
| Q |
111 |
ccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttcaatt |
210 |
Q |
| |
|
|||| |||||||||| ||||||||| ||| |||||||| |||| ||| | |||||||||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
14520144 |
ccaaaggtgcttcttcctctgatattattcgcctgttaactgcaaatcctaaaattttacaaagtagtttggagaaacgaataatccctctttttcaatt |
14520243 |
T |
|
| Q |
211 |
attaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgtttataa---ctccccttcaccttctagaggctaat |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||| |||||||| | |||| ||| |||||||||||||| |
|
|
| T |
14520244 |
gttaaataggttttcgaaaaccaacaaggataccattgtttgcttaattcgaaattcactatcgtttattatttatccctatcatgttctagaggctaat |
14520343 |
T |
|
| Q |
308 |
atcaatttgatggttgattttggagtttgtgattctgccattgctagattgattcgaactaggaaatctata |
379 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||| ||||||||||||| ||| ||| ||| ||||||| |
|
|
| T |
14520344 |
atcaatttgatgattgaatttggagtttctgattctaacattgctagattgcttcaaacaaggtcatctata |
14520415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 14533901 - 14534098
Alignment:
| Q |
24 |
acatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatatccaatggtgcttc |
123 |
Q |
| |
|
||||||| ||||||||| |||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
14533901 |
acatacgcatcatcatccaaaaggcaccttggttactttcatcacaaccccacaaaaggttattgccaaagtttcaattttttctatccaatggtgcttc |
14534000 |
T |
|
| Q |
124 |
tttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttcaattattaaataggt |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||| ||||||||||||||||||| ||||| |
|
|
| T |
14534001 |
tttatctgatattgttccattgttaactacaaaccctcgaattttacgaagtagcttggagaaacaaataatccctctttttcaattattaagtaggt |
14534098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 24 - 358
Target Start/End: Original strand, 15007739 - 15008076
Alignment:
| Q |
24 |
acatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatatccaatggtgcttc |
123 |
Q |
| |
|
||||||| |||||||| | ||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||| ||| |||| ||||||| |||||||| |
|
|
| T |
15007739 |
acatacgcatcatcattagaaaagaaccatggttactttcatcacaaccccacaaaatgttattgccaaagtttgaatattttctatccaaaggtgcttc |
15007838 |
T |
|
| Q |
124 |
tttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttcaattattaaataggttt |
223 |
Q |
| |
|
|| | ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||| ||||||||| |||| |||| |||||| |
|
|
| T |
15007839 |
ttcagctgatattgtttcattgttaactgcaaaccctacaattttacgaagtagcttgggcaaacgaataatccctctttttgaattgttaagtaggttc |
15007938 |
T |
|
| Q |
224 |
tcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgtttataact--cccct-tcaccttctagaggctaatatcaatttgatgg |
320 |
Q |
| |
|
| |||||||||||||||| ||||||| | || |||||||||||| ||||||||| | | ||| | ||||||| | | |||||||||||||||||| |
|
|
| T |
15007939 |
tttaaaaccaacaaggatatcattgtttgcttacttcgacattcaatgtcgtttattattagcccatatcaccttattgtggctaatatcaatttgataa |
15008038 |
T |
|
| Q |
321 |
ttgattttggagtttgtgattctgccattgctagattg |
358 |
Q |
| |
|
|| ||||||||||| ||||||| ||||||||| |||| |
|
|
| T |
15008039 |
ctggttttggagtttctgattctaccattgctaaattg |
15008076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 14512217 - 14512441
Alignment:
| Q |
24 |
acatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatatccaatggtgcttc |
123 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
14512217 |
acatacgcatcatgatcagaagagcaccatggttactttcatcacaaccccacaaaaggtttttgccaaagtttcaattttttctatccaatgctgcttc |
14512316 |
T |
|
| Q |
124 |
tttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggac------aaacgaataattcctctttttcaattattaaat |
217 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||| ||||||||| ||||||||| | |
|
|
| T |
14512317 |
ttcctctgatattgttccattgttaactacaaaccctagaattttacgaagtagcttggacttggagaaacaaataatccctctttttgaattattaagt |
14512416 |
T |
|
| Q |
218 |
aggttttcgaaaaccaacaaggata |
242 |
Q |
| |
|
||||| | ||||||||||||||||| |
|
|
| T |
14512417 |
aggttcttgaaaaccaacaaggata |
14512441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 14528667 - 14528891
Alignment:
| Q |
24 |
acatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatatccaatggtgcttc |
123 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
14528667 |
acatacgcatcatgatcagaagagcaccatggttactttcatcacaaccccacaaaaggtttttgccaaagtttcaattttttctatccaatgctgcttc |
14528766 |
T |
|
| Q |
124 |
tttatctgatattgttccattgttaactacaaaccctcacattttacaaagtag------cttggacaaacgaataattcctctttttcaattattaaat |
217 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||| |||||| ||||||||| ||||||||| | |
|
|
| T |
14528767 |
ttcctctgatattgttccattgttaactacaaaccctagaattttacgaagtagcctggacttggagaaacaaataatccctctttttgaattattaagt |
14528866 |
T |
|
| Q |
218 |
aggttttcgaaaaccaacaaggata |
242 |
Q |
| |
|
||||| | ||||||||||||||||| |
|
|
| T |
14528867 |
aggttcttgaaaaccaacaaggata |
14528891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 14542893 - 14543117
Alignment:
| Q |
24 |
acatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatatccaatggtgcttc |
123 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
14542893 |
acatacgcatcatgatcagaagagcaccatggttactttcatcacaaccccacaaaaggtttttgccaaagtttcaattttttctatccaatgctgcttc |
14542992 |
T |
|
| Q |
124 |
tttatctgatattgttccattgttaactacaaaccctcacattttacaaagtag------cttggacaaacgaataattcctctttttcaattattaaat |
217 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||| |||||| ||||||||| ||||||||| | |
|
|
| T |
14542993 |
ttcctctgatattgttccattgttaactacaaaccctagaattttacgaagtagcctggacttggagaaacaaataatccctctttttgaattattaagt |
14543092 |
T |
|
| Q |
218 |
aggttttcgaaaaccaacaaggata |
242 |
Q |
| |
|
||||| | ||||||||||||||||| |
|
|
| T |
14543093 |
aggttcttgaaaaccaacaaggata |
14543117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 15019628 - 15019999
Alignment:
| Q |
11 |
ttttcacactctgacatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttatat |
110 |
Q |
| |
|
|||||| |||| |||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||| ||| |
|
|
| T |
15019628 |
ttttcaaactccaacattcgcatcatcatcaaaaaagcaccttggttactttcatcacaaccccacaaaatgttattgccaaagtttcaattctttctat |
15019727 |
T |
|
| Q |
111 |
ccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttcaatt |
210 |
Q |
| |
|
| ||| | ||| || ||||||||| |||||||||||||| || ||||| ||||||||| |||||||||| | ||||||||| ||| ||||| |||| |
|
|
| T |
15019728 |
ctgatgcttcttattcctctgatattattccattgttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctttttttgaatt |
15019827 |
T |
|
| Q |
211 |
attaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgtt---tataactccccttcaccttctagaggctaat |
307 |
Q |
| |
|
||||| ||||| | ||||||||||||||||| ||||||| | |||||||| ||| | | || || | ||||| | ||| | | | | ||||| |
|
|
| T |
15019828 |
attaagtaggtacttgaaaaccaacaaggatatcattgtttgcttaattcgatattggactgcattttctactaatccccatgaccgtattgtgtctaat |
15019927 |
T |
|
| Q |
308 |
atcaatttgatggttgattttggagtttgtgattctgccattgctagattgattcgaactaggaaatctata |
379 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
15019928 |
atcaatttgatggttgattttggattttctgattctaccattgctagattgcttcgaacaaggccatctata |
15019999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 14547026 - 14547257
Alignment:
| Q |
10 |
tttttcacactctgacatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttata |
109 |
Q |
| |
|
||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||| |||| | | ||||| |||||| |||||||| || |
|
|
| T |
14547026 |
tttttcacactctgatatacgaatcatcattagaaaagcaccatggttactttcattacaaccccacaatataattttgcccaagtttgaattttttcta |
14547125 |
T |
|
| Q |
110 |
tccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaataattcctctttttcaat |
209 |
Q |
| |
|
||||| |||||| ||| ||||||||||||| |||| |||| |||||||| ||||| | |||||||||||| |||||||| || ||||||||||||| |
|
|
| T |
14547126 |
tccaaaggtgctacttcatctgatattgtttcattcataacagaaaaccctcgaattttgcgaagtagcttggagaaacgaattatccctctttttcaat |
14547225 |
T |
|
| Q |
210 |
tattaaataggttttcgaaaaccaacaaggat |
241 |
Q |
| |
|
| |||| ||| || | |||||||||||||||| |
|
|
| T |
14547226 |
tgttaagtagcttcttgaaaaccaacaaggat |
14547257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 267
Target Start/End: Original strand, 14552317 - 14552493
Alignment:
| Q |
91 |
taagtttcaattttttatatccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacga |
190 |
Q |
| |
|
||||||| ||| |||| ||||||| |||||||||| |||| ||||| || ||||||||||| |||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
14552317 |
taagtttgaatattttctatccaaaggtgcttcttcatctcatattatttcattgttaacttcaaaccctcaaattttacaaagtagcctggacaaacga |
14552416 |
T |
|
| Q |
191 |
ataattcctctttttcaattattaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattc |
267 |
Q |
| |
|
||||| ||||||||| |||| |||| | ||| | ||||| ||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
14552417 |
ataatccctctttttgaattgttaagaatgttctttaaaactaacaaggatacaattgtttgcttaattcgacattc |
14552493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 358
Target Start/End: Original strand, 15023743 - 15024013
Alignment:
| Q |
91 |
taagtttcaattttttatatccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacga |
190 |
Q |
| |
|
||||||| |||||||| ||||||| |||||||||| |||| |||||||| |||||||||||||| ||||||| |||||||||| |||||| || || ||| |
|
|
| T |
15023743 |
taagtttgaattttttctatccaaaggtgcttcttcatctcatattgtttcattgttaactacataccctcaaattttacaaactagctttgagaatcga |
15023842 |
T |
|
| Q |
191 |
ataattcctctttttcaattattaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattcaaggtcgtttataa---ctcccc |
287 |
Q |
| |
|
||||| ||||||||| |||| ||| ||||| | ||||| ||||||||||||||||||| | |||||| |||||| | | | ||| | ||||| |
|
|
| T |
15023843 |
ataatccctctttttaaattgctaacaaggttctttaaaactaacaaggatactattgtttgcttaattcaacattcgaaatgggttactagtcatcccc |
15023942 |
T |
|
| Q |
288 |
ttcaccttctagaggctaatatcaatttgatggttgattttggagtttgtgattctgccattgctagattg |
358 |
Q |
| |
|
||||||| | | ||||| ||||||| |||| |||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
15023943 |
atcaccttattgtggctagtatcaatctgatttctgattttggagtttctgattctgtcattgctagattg |
15024013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 91 - 243
Target Start/End: Complemental strand, 14850684 - 14850532
Alignment:
| Q |
91 |
taagtttcaattttttatatccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacga |
190 |
Q |
| |
|
||||||| ||| |||| ||||||| |||||||||| ||| ||||| || ||||||||||| |||||||||| ||||||||| |||||| ||||||||| |
|
|
| T |
14850684 |
taagtttgaatattttctatccaaaggtgcttcttcctctcatattatttcattgttaacttcaaaccctcaaattttacaatatagcttagacaaacga |
14850585 |
T |
|
| Q |
191 |
ataattcctctttttcaattattaaataggttttcgaaaaccaacaaggatac |
243 |
Q |
| |
|
||||| ||||||||| ||||||||| |||||| | |||| ||| ||||||||| |
|
|
| T |
14850584 |
ataatccctctttttgaattattaagtaggttcttgaaatccagcaaggatac |
14850532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 269
Target Start/End: Original strand, 14567359 - 14567534
Alignment:
| Q |
94 |
gtttcaattttttatatccaatggtgcttctttatctgatattgttccattgttaactacaaaccctcacattttacaaagtagcttggacaaacgaata |
193 |
Q |
| |
|
|||||| |||||| ||||||| |||||||||| ||||| |||||| ||||||||||| |||||||| ||||| || | ||| ||||| ||||||||| |
|
|
| T |
14567359 |
gtttcacttttttctatccaaaggtgcttcttcctctgagattgtttcattgttaacttcaaaccctataattttgcatattagtttggagaaacgaata |
14567458 |
T |
|
| Q |
194 |
attcctctttttcaattattaaataggttttcgaaaaccaacaaggatactattgtttacataattcgacattcaa |
269 |
Q |
| |
|
|| ||||||||| |||| |||| || ||| | |||||||||||| |||| ||| ||| | ||||||| ||||||| |
|
|
| T |
14567459 |
atccctctttttgaattgttaagtaagttcttgaaaaccaacaaagatatcattatttgcttaattcggcattcaa |
14567534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 369
Target Start/End: Original strand, 14534166 - 14534246
Alignment:
| Q |
289 |
tcaccttctagaggctaatatcaatttgatggttgattttggagtttgtgattctgccattgctagattgattcgaactag |
369 |
Q |
| |
|
||||||| | | ||||||||||||||||||| |||||||||| || | |||||| ||||||||||||||||||| |||| |
|
|
| T |
14534166 |
tcaccttattgtggctaatatcaatttgatgactgattttggaattcctcattctgtcattgctagattgattcgatctag |
14534246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 14547321 - 14547373
Alignment:
| Q |
302 |
gctaatatcaatttgatggttgattttggagtttgtgattctgccattgctag |
354 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
14547321 |
gctaatatcaatttgatgactgattttggagtttctgattctgtcattgctag |
14547373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 14850471 - 14850418
Alignment:
| Q |
301 |
ggctaatatcaatttgatggttgattttggagtttgtgattctgccattgctag |
354 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||| || ||||||||| |
|
|
| T |
14850471 |
ggctaatatcaatttgatgactgattttggagtttctgataatgtcattgctag |
14850418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 17357177 - 17357027
Alignment:
| Q |
10 |
tttttcacactctgacatacgaatcatcatcaaaaaagcaccatggttactttcatcacaacccgacaaaaggttattgcctaagtttcaattttttata |
109 |
Q |
| |
|
|||| ||||||| ||||| |||||||||| | ||||||||||||||| |||||| |||| || |||| | | ||||| |||||| |||||||| || |
|
|
| T |
17357177 |
ttttgcacactccgacattcgaatcatcaatagaaaagcaccatggtttgtttcattacaatcccacaatataattttgccaaagtttgaattttttcta |
17357078 |
T |
|
| Q |
110 |
tccaatggtgcttctttatctgatattgttccattgttaactacaaaccct |
160 |
Q |
| |
|
||||| |||||| ||| ||||||||||||| |||| ||||| |||||||| |
|
|
| T |
17357077 |
tccaaaggtgctacttcatctgatattgtttcattcgtaactgcaaaccct |
17357027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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